The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP016837	Salmonella enterica subsp. enterica serovar Senftenberg strain 775W (ATCC 43845) chromosome, complete genome	4920660	378	81885	4920660	head,plate,transposase,tRNA,portal,protease,tail	Shigella_phage(51.06%)	90	NA	NA
WP_001651089.1|378_2268_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
WP_001519938.1|2370_2994_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA	NA
WP_023205107.1|3609_3990_+	F0F1 ATP synthase subunit I	NA	NA	NA	NA	NA
WP_000135632.1|3998_4814_+	F0F1 ATP synthase subunit A	NA	NA	NA	NA	NA
WP_000429386.1|4860_5100_+	F0F1 ATP synthase subunit C	NA	NA	NA	NA	NA
WP_001052212.1|5159_5630_+	F0F1 ATP synthase subunit B	NA	NA	NA	NA	NA
WP_001288957.1|5644_6178_+	F0F1 ATP synthase subunit delta	NA	NA	NA	NA	NA
WP_001176751.1|6190_7732_+	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA	NA
WP_000896506.1|7782_8646_+	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA	NA
WP_000190499.1|8672_10055_+	F0F1 ATP synthase subunit beta	NA	NA	NA	NA	NA
WP_001251971.1|10075_10495_+	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA	NA
WP_000009907.1|10724_11423_+	Bax inhibitor-1 family protein	NA	NA	NA	NA	NA
WP_000934851.1|11742_13113_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A0N7G7I9	Chrysochromulina_ericina_virus	38.7	8.7e-37
WP_000334059.1|13301_15131_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	A7IW18	Paramecium_bursaria_Chlorella_virus	42.9	1.2e-129
WP_023205108.1|15280_17038_-	SgrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000166709.1|17132_17951_+	shikimate 5-dehydrogenase	NA	NA	NA	NA	NA
WP_000162545.1|17999_19373_+	PTS transporter subunit EIIC	NA	NA	NA	NA	NA
WP_000867131.1|19539_20580_+	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	35.9	1.2e-46
WP_000741630.1|20715_21675_+	phosphate ABC transporter permease PstC	NA	NA	NA	NA	NA
WP_000212197.1|21674_22565_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_000063118.1|22651_23425_+	phosphate ABC transporter ATP-binding protein PstB	NA	W8CYL7	Bacillus_phage	30.6	2.0e-14
WP_000377800.1|23439_24165_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA	NA
WP_000078081.1|24259_24925_-	6-phosphogluconate phosphatase	NA	NA	NA	NA	NA
WP_001651085.1|25093_26431_+	adenine permease AdeP	NA	A0A0R6PHV4	Moraxella_phage	37.1	2.4e-63
WP_001575173.1|26475_27060_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_000190678.1|27059_27815_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000749365.1|27972_28932_-	HTH-type transcriptional regulator YidZ	NA	NA	NA	NA	NA
WP_001583480.1|28900_30088_-	MFS transporter	NA	NA	NA	NA	NA
WP_023205109.1|30566_31409_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023205110.1|31405_31837_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024146388.1|31998_32412_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023205112.1|32545_33169_+	recombinase family protein	NA	NA	NA	NA	NA
WP_023205113.1|33318_33816_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA	NA
WP_006811354.1|33882_35865_+	SAM-dependent DNA methyltransferase	NA	A0A220A2U5	Liberibacter_phage	25.6	8.4e-33
WP_023205114.1|35861_37148_+	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_023205115.1|37147_40384_+	type I restriction endonuclease subunit R	NA	NA	NA	NA	NA
WP_044133307.1|40380_40938_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024146389.1|40940_41780_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023205118.1|41815_42850_+	virulence RhuM family protein	NA	Q9JMN3	Wolbachia_phage	43.5	1.1e-71
WP_023205119.1|42907_43492_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024146390.1|44013_44211_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_023205120.1|44219_45890_+	DUF927 domain-containing protein	NA	NA	NA	NA	NA
WP_000136520.1|45947_46292_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_023205121.1|46470_46620_+	hypothetical protein	NA	NA	NA	NA	NA
WP_072142703.1|47809_48553_-	protein mom	NA	A0A0C4UQZ7	Shigella_phage	87.6	6.0e-125
WP_024146391.1|48473_48659_-	Com family DNA-binding transcriptional regulator	NA	A0A0C4UQS3	Shigella_phage	71.0	1.4e-19
WP_023205124.1|48784_49351_-	recombinase family protein	NA	A0A0F7LA37	Escherichia_phage	78.0	4.9e-79
WP_023205125.1|49425_49944_-|tail	tail fiber assembly protein	tail	A0A1S6KZZ1	Salmonella_phage	30.2	1.8e-11
WP_023205126.1|49946_51395_-|tail	tail fiber protein	tail	C9DGQ8	Escherichia_phage	39.8	4.9e-30
WP_078055474.1|51397_51937_-	DUF2313 domain-containing protein	NA	C9DGQ7	Escherichia_phage	68.2	3.0e-65
WP_023205128.1|51933_53016_-|plate	baseplate J/gp47 family protein	plate	A0A0C4UQU9	Shigella_phage	67.4	7.3e-140
WP_023205129.1|53005_53455_-	phage GP46 family protein	NA	A0A0C4UR04	Shigella_phage	72.4	5.3e-52
WP_023205130.1|53451_54036_-|plate	phage baseplate assembly protein V	plate	A0A0C4UQZ3	Shigella_phage	74.1	1.9e-81
WP_024146392.1|54035_55169_-|tail	tail protein	tail	C9DGQ3	Escherichia_phage	72.4	3.4e-156
WP_023205132.1|55158_56595_-	DNA circularization protein	NA	A0A0C4UR32	Shigella_phage	42.0	1.3e-99
WP_023205133.1|56602_58678_-	tape measure protein	NA	A0A0C4UQU8	Shigella_phage	50.9	3.4e-133
WP_023205134.1|58819_59257_-|tail	phage tail assembly protein	tail	A0A0C4UR03	Shigella_phage	71.3	1.7e-50
WP_023205135.1|59266_59623_-|tail	phage tail tube protein	tail	A0A0C4UQZ1	Shigella_phage	88.1	5.7e-57
WP_023205136.1|59632_61132_-|tail	phage tail sheath subtilisin-like domain-containing protein	tail	C9DGP7	Escherichia_phage	72.1	8.2e-206
WP_023205137.1|61128_61305_-	DUF2635 domain-containing protein	NA	A0A0C4UR31	Shigella_phage	62.8	3.7e-09
WP_023205138.1|61297_61834_-	DUF1834 family protein	NA	A0A0C4UQU7	Shigella_phage	74.9	2.4e-75
WP_023205139.1|61833_62259_-	DUF1320 family protein	NA	C9DGP4	Escherichia_phage	61.7	3.2e-46
WP_023205141.1|62741_63662_-|head	Mu-like prophage major head subunit gpT family protein	head	A0A0C4UQR9	Shigella_phage	76.1	1.1e-136
WP_023205142.1|63658_64759_-|protease	phage protease	protease	A0A0C4UQU6	Shigella_phage	78.0	1.5e-148
WP_023205143.1|64968_65439_-	phage virion morphogenesis protein	NA	C9DGN8	Escherichia_phage	68.8	1.5e-57
WP_023205144.1|65561_66893_-|head	phage head morphogenesis protein	head	A0A0C4UQY9	Shigella_phage	73.0	3.1e-188
WP_023205145.1|66876_68421_-	DUF935 domain-containing protein	NA	A0A0C4UQR8	Shigella_phage	75.1	3.9e-227
WP_023205146.1|68420_70085_-|portal	phage portal protein	portal	A0A0C4UR29	Shigella_phage	85.0	4.9e-276
WP_023205147.1|70087_70666_-	DUF3486 family protein	NA	A0A0C4UQU5	Shigella_phage	91.7	3.5e-88
WP_023205148.1|70675_70963_-	hypothetical protein	NA	A0A0C4UR00	Shigella_phage	91.6	1.1e-42
WP_023205149.1|70959_71271_-	DUF2730 family protein	NA	A0A0C4UQY8	Shigella_phage	64.9	3.7e-28
WP_024146394.1|71275_71470_-	hypothetical protein	NA	C9DGN1	Escherichia_phage	62.5	1.2e-16
WP_077941082.1|71426_71729_-	peptidase	NA	NA	NA	NA	NA
WP_024146396.1|71628_72015_-	hypothetical protein	NA	A0A0C4UR28	Shigella_phage	52.8	5.1e-27
WP_023205151.1|72001_72514_-	lysozyme	NA	C9DGM9	Escherichia_phage	82.9	5.8e-79
WP_023205152.1|72628_73051_-	phage transcription regulator	NA	A0A0C4UQZ9	Shigella_phage	74.6	1.0e-52
WP_023205154.1|73676_74183_-	regulatory protein GemA	NA	A0A0C4UQU3	Shigella_phage	46.1	9.0e-32
WP_023205155.1|74169_74619_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077941084.1|74615_74936_-	hypothetical protein	NA	A0A2R2Z2X8	Escherichia_phage	62.8	2.8e-07
WP_023205157.1|75295_75754_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052346927.1|75836_76316_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023205159.1|76299_76563_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023205160.1|76647_77172_-	host-nuclease inhibitor Gam family protein	NA	C9DGL8	Escherichia_phage	70.9	3.5e-63
WP_086126400.1|77172_77427_-	host nuclease inhibitor protein	NA	A0A0U5KSG7	unidentified_phage	48.0	5.5e-14
WP_023205162.1|77436_77694_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023205163.1|77710_77950_-	hypothetical protein	NA	A0A0C4UQY4	Shigella_phage	58.1	4.7e-15
WP_023205164.1|77962_78910_-	AAA family ATPase	NA	A0A0C4UQR3	Shigella_phage	81.7	2.0e-141
WP_024146401.1|78957_80955_-|transposase	Mu transposase C-terminal domain-containing protein	transposase	C9DGL1	Escherichia_phage	70.3	5.8e-284
WP_023205166.1|80951_81179_-	helix-turn-helix domain-containing protein	NA	A0A2H4J3B6	uncultured_Caudovirales_phage	44.1	4.2e-05
WP_077941085.1|81405_81885_+	helix-turn-helix transcriptional regulator	NA	A0A076FRF7	Pseudomonas_phage	51.8	2.0e-09
>prophage 2
NZ_CP016837	Salmonella enterica subsp. enterica serovar Senftenberg strain 775W (ATCC 43845) chromosome, complete genome	4920660	719733	774859	4920660	head,plate,terminase,capsid,holin,integrase,portal,tRNA,tail	Cronobacter_phage(65.0%)	61	737632:737647	779507:779522
WP_001650780.1|719733_720132_-|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_000031219.1|720134_720440_-	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_000877297.1|720481_720850_-	DUF1090 domain-containing protein	NA	NA	NA	NA	NA
WP_000917516.1|720994_721378_-	EnvZ/OmpR regulon moderator MzrA	NA	NA	NA	NA	NA
WP_000422141.1|721381_722044_-	DedA family protein	NA	NA	NA	NA	NA
WP_000235363.1|722493_723738_-	serine/threonine transporter SstT	NA	NA	NA	NA	NA
WP_001098836.1|723992_724961_-	TerC family protein	NA	I7HPH5	Enterobacteria_phage	34.9	5.0e-39
WP_000617682.1|725230_726229_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_000951045.1|726316_727009_-	vancomycin high temperature exclusion protein	NA	NA	NA	NA	NA
WP_000202969.1|727160_727658_-	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_000019989.1|727743_728880_+	23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG	NA	NA	NA	NA	NA
WP_023205465.1|728960_730979_-	NADPH-dependent 2,4-dienoyl-CoA reductase	NA	NA	NA	NA	NA
WP_001520281.1|731149_732529_-	putrescine aminotransferase	NA	A0A1V0SKB7	Klosneuvirus	29.0	2.9e-32
WP_023202743.1|732958_734479_+	PAS domain-containing methyl-accepting chemotaxis protein	NA	A0A1B0V854	Salmonella_phage	47.8	2.5e-32
WP_000478462.1|734865_736434_+	MCP four helix bundle domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	33.5	2.2e-12
WP_000983434.1|736430_737078_-	PadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_001650769.1|737309_738077_+	siderophore-interacting protein	NA	NA	NA	NA	NA
737632:737647	attL	ATGGCGGCGTAGCCAG	NA	NA	NA	NA
WP_020845301.1|738287_739325_-|integrase	tyrosine-type recombinase/integrase	integrase	F1BUS9	Erwinia_phage	65.6	7.1e-124
WP_023205464.1|739311_740205_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023205463.1|740233_740812_-	phage repressor protein CI	NA	A0A218M4J1	Erwinia_phage	39.5	1.2e-27
WP_001247709.1|740931_741153_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000460878.1|741183_741687_+	phage regulatory CII family protein	NA	F1BUN6	Cronobacter_phage	72.5	3.5e-60
WP_000643372.1|741696_741879_+	DUF2724 domain-containing protein	NA	NA	NA	NA	NA
WP_000704101.1|741883_742309_+	hypothetical protein	NA	F1BUN5	Cronobacter_phage	56.2	1.7e-28
WP_000974862.1|742308_742710_+	hypothetical protein	NA	F1BUN2	Cronobacter_phage	66.2	1.2e-47
WP_000551163.1|742777_743011_+	DUF2732 family protein	NA	NA	NA	NA	NA
WP_023205462.1|743001_743781_+	hypothetical protein	NA	H6WRY2	Salmonella_phage	82.1	1.7e-37
WP_000153512.1|743777_744107_+	DUF3850 domain-containing protein	NA	Q2P9X4	Enterobacteria_phage	45.2	3.0e-12
WP_023205461.1|744096_744957_+	DNA adenine methylase	NA	F1BUN1	Cronobacter_phage	82.4	1.1e-130
WP_023205460.1|744953_746975_+	replication endonuclease	NA	F1BUM9	Cronobacter_phage	74.8	3.2e-298
WP_001748628.1|747094_747301_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001552031.1|747274_747598_-	ogr/Delta-like zinc finger family protein	NA	F1BUM8	Cronobacter_phage	92.3	8.0e-50
WP_001650413.1|747594_748656_-|portal	phage portal protein	portal	F1BUM7	Cronobacter_phage	77.3	3.0e-162
WP_001650412.1|748652_750428_-|terminase	phage terminase ATPase subunit	terminase	F1BUM5	Cronobacter_phage	83.1	1.7e-290
WP_000018798.1|750588_751389_+|capsid	GPO family capsid scaffolding protein	capsid	F1BUM4	Cronobacter_phage	54.8	3.2e-76
WP_000550496.1|751450_752473_+|capsid	phage major capsid protein, P2 family	capsid	F1BUM2	Cronobacter_phage	81.2	1.1e-158
WP_001218535.1|752476_753178_+|terminase	terminase	terminase	F1BUM0	Cronobacter_phage	66.8	2.7e-87
WP_000447487.1|753238_753727_+|head	head completion/stabilization protein	head	F1BUL8	Cronobacter_phage	82.7	2.3e-64
WP_000084220.1|753723_754230_+|tail	phage tail protein	tail	F1BUL7	Cronobacter_phage	69.8	5.2e-64
WP_000560084.1|754226_754934_+	hypothetical protein	NA	F1BUL6	Cronobacter_phage	76.1	3.4e-101
WP_000220204.1|754930_756058_+	DUF2586 family protein	NA	F1BUL5	Cronobacter_phage	83.5	3.3e-175
WP_000166743.1|756054_756510_+	DUF2597 family protein	NA	F1BUL4	Cronobacter_phage	72.2	1.5e-57
WP_001154425.1|756519_756813_+|holin	phage holin family protein	holin	C7BGD7	Burkholderia_phage	46.2	1.3e-14
WP_000175560.1|756809_757151_+	M15 family metallopeptidase	NA	F1BUL3	Cronobacter_phage	91.1	2.2e-50
WP_000376375.1|757150_757483_+	hypothetical protein	NA	F1BUL2	Cronobacter_phage	71.8	6.7e-36
WP_000411339.1|757629_757887_+	hypothetical protein	NA	A5X9I7	Aeromonas_virus	63.4	3.6e-21
WP_001650410.1|758074_760045_+|tail	phage tail tape measure protein	tail	F1BUK9	Cronobacter_phage	69.8	2.1e-270
WP_001002797.1|760041_760371_+	DUF2590 family protein	NA	F1BUK8	Cronobacter_phage	72.4	3.8e-39
WP_000136922.1|760367_761552_+|plate	baseplate J/gp47 family protein	plate	F1BUK6	Cronobacter_phage	78.1	2.0e-178
WP_001001827.1|761544_762132_+	hypothetical protein	NA	F1BUK5	Cronobacter_phage	81.5	2.1e-88
WP_023205459.1|762141_764154_+|tail	phage tail protein	tail	F1BUK3	Cronobacter_phage	81.2	2.1e-148
WP_001215677.1|764156_764687_+|tail	tail fiber assembly protein	tail	A0A1S6KZZ1	Salmonella_phage	32.4	4.4e-13
WP_000267951.1|764676_765402_+	hypothetical protein	NA	F1BUK1	Cronobacter_phage	56.4	6.6e-68
WP_000200796.1|765373_765919_+	hypothetical protein	NA	F1BUJ9	Cronobacter_phage	72.0	1.4e-59
WP_024132237.1|765921_767622_+	hypothetical protein	NA	F1BUJ7	Cronobacter_phage	81.3	2.2e-223
WP_001128281.1|768210_768372_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001620119.1|768794_769301_+	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA	NA
WP_023181561.1|769424_771272_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	33.7	8.4e-35
WP_000918865.1|771421_773167_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	38.4	2.1e-72
WP_001144069.1|773402_773618_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_023205458.1|773845_774859_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	59.2	1.4e-108
779507:779522	attR	CTGGCTACGCCGCCAT	NA	NA	NA	NA
>prophage 3
NZ_CP016837	Salmonella enterica subsp. enterica serovar Senftenberg strain 775W (ATCC 43845) chromosome, complete genome	4920660	1548887	1624703	4920660	terminase,capsid,integrase,tRNA,protease,tail,lysis	Salmonella_phage(66.22%)	102	1586866:1586881	1606028:1606043
WP_001650258.1|1548887_1549826_+|protease	omptin family outer membrane protease PgtE	protease	NA	NA	NA	NA
WP_023234529.1|1550426_1550750_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000487123.1|1550759_1551002_-	DUF4222 domain-containing protein	NA	NA	NA	NA	NA
WP_023205219.1|1550964_1552038_-	DNA cytosine methyltransferase	NA	Q858D4	Salmonella_phage	68.2	5.4e-143
WP_000200029.1|1552037_1552259_-	TraR/DksA family transcriptional regulator	NA	A0A0N7C211	Escherichia_phage	54.3	1.6e-14
WP_000870087.1|1553097_1553265_-	hypothetical protein	NA	G8C7S7	Escherichia_phage	74.1	1.9e-15
WP_001275767.1|1553264_1553549_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000168278.1|1554050_1554509_-	single-stranded DNA-binding protein	NA	C6ZR36	Salmonella_phage	89.0	2.6e-70
WP_023205220.1|1554509_1555217_-	hypothetical protein	NA	B8K1D9	Salmonella_phage	96.2	6.1e-135
WP_000902091.1|1555213_1555357_-	hypothetical protein	NA	I6S1M5	Salmonella_phage	100.0	4.2e-19
WP_000156731.1|1555346_1555535_-	DUF5444 family protein	NA	I6S647	Salmonella_phage	100.0	3.7e-31
WP_000141640.1|1555515_1555674_-|protease	protease FtsH-inhibitory lysogeny factor CIII	protease	I6R987	Salmonella_phage	100.0	8.1e-24
WP_023205221.1|1555883_1556597_-	hypothetical protein	NA	A0A2H4FRY7	Salmonella_phage	88.6	1.6e-79
WP_000843522.1|1556685_1557129_-	hypothetical protein	NA	E5AGE5	Erwinia_phage	62.6	3.0e-47
WP_023205222.1|1557145_1557508_-	hypothetical protein	NA	C6ZR44	Salmonella_phage	89.2	3.9e-53
WP_023205223.1|1557875_1558085_+	fumarate hydratase FumD	NA	I6R0R9	Salmonella_phage	95.7	2.2e-29
WP_031608838.1|1558226_1558985_-	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
WP_024140157.1|1558981_1559518_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023205224.1|1559612_1560266_-	LexA family transcriptional regulator	NA	I6R0S2	Salmonella_phage	99.1	3.3e-127
WP_001059982.1|1560375_1560585_+	helix-turn-helix transcriptional regulator	NA	I6S1U2	Salmonella_phage	100.0	2.1e-35
WP_000424138.1|1560715_1561006_+	hypothetical protein	NA	I6RSP4	Salmonella_phage	100.0	2.4e-45
WP_001226911.1|1561027_1561288_+	hypothetical protein	NA	G9L679	Escherichia_phage	74.1	3.4e-27
WP_076707680.1|1561350_1562349_+	replication protein	NA	G9L680	Escherichia_phage	64.8	2.1e-85
WP_023205059.1|1562345_1563722_+	AAA family ATPase	NA	I6R0N4	Salmonella_phage	99.6	1.6e-253
WP_001748045.1|1563792_1564056_+	hypothetical protein	NA	I6R992	Salmonella_phage	63.2	2.7e-24
WP_023205060.1|1564195_1564642_+	recombination protein NinB	NA	Q8VNP6	Enterobacteria_phage	81.1	1.3e-66
WP_023205061.1|1564638_1565166_+	phage N-6-adenine-methyltransferase	NA	K7PJZ4	Enterobacterial_phage	97.7	8.9e-99
WP_001254251.1|1565162_1565345_+	NinE family protein	NA	Q716C5	Shigella_phage	100.0	1.3e-28
WP_000566872.1|1565341_1565512_+	protein ninF	NA	K7PM86	Enterobacteria_phage	100.0	1.2e-25
WP_023205062.1|1566046_1566649_+	recombination protein NinG	NA	A0A1U9AJF8	Stx1_converting_phage	93.6	6.0e-91
WP_000036319.1|1566645_1566870_+	hypothetical protein	NA	I6R0N9	Salmonella_phage	98.6	1.8e-37
WP_000149880.1|1566866_1567070_+	protein ninH	NA	A0A1V0E5I5	Salmonella_phage	100.0	5.5e-33
WP_001650242.1|1567050_1567230_+	hypothetical protein	NA	A0A1V0E5I7	Salmonella_phage	96.6	7.8e-23
WP_023205063.1|1567226_1567733_+	DUF1133 family protein	NA	A0A1R3Y5U9	Salmonella_virus	94.6	3.0e-88
WP_023205064.1|1568208_1568412_+	hypothetical protein	NA	I6R0S9	Salmonella_phage	97.0	1.9e-33
WP_023205065.1|1568389_1568887_+	lysozyme RrrD	NA	I6R0P2	Salmonella_phage	98.8	2.4e-90
WP_010835562.1|1568975_1569443_+|lysis	lysis protein	lysis	Q76H63	Enterobacteria_phage	88.4	1.4e-68
WP_001530409.1|1569652_1570150_+	KilA-N domain-containing protein	NA	A0A1V0E5R9	Salmonella_phage	100.0	1.4e-93
WP_001283924.1|1570146_1570404_+	hypothetical protein	NA	A0A1V0E5Q1	Salmonella_phage	100.0	3.8e-39
WP_000147264.1|1570798_1571230_+|terminase	terminase small subunit	terminase	A0A1V0E5Q4	Salmonella_phage	100.0	7.6e-72
WP_000445802.1|1571213_1572533_+|terminase	terminase	terminase	H6WRS9	Salmonella_phage	100.0	1.9e-262
WP_020838511.1|1572665_1574018_+	DUF1073 domain-containing protein	NA	H6WRT0	Salmonella_phage	99.6	1.3e-258
WP_020838512.1|1573971_1574931_+|capsid	minor capsid protein	capsid	H6WRT1	Salmonella_phage	99.7	4.6e-178
WP_023205066.1|1574946_1576209_+	hypothetical protein	NA	H6WRT2	Salmonella_phage	99.8	8.0e-239
WP_001650234.1|1576221_1576668_+	hypothetical protein	NA	H6WRT3	Salmonella_phage	100.0	3.1e-76
WP_000273924.1|1576685_1577762_+	hypothetical protein	NA	Q5G8Y0	Enterobacteria_phage	100.0	1.4e-207
WP_001151796.1|1577771_1577960_+	hypothetical protein	NA	Q5G8X9	Enterobacteria_phage	100.0	2.9e-28
WP_000633370.1|1578011_1578413_+	hypothetical protein	NA	Q5G8X8	Enterobacteria_phage	100.0	1.4e-72
WP_001650231.1|1578412_1578592_+	DUF551 domain-containing protein	NA	Q5G8X7	Enterobacteria_phage	98.3	2.5e-29
WP_001650230.1|1578584_1578947_+	hypothetical protein	NA	Q5G8X6	Enterobacteria_phage	95.8	5.8e-65
WP_023205067.1|1578936_1579428_-	HNH endonuclease	NA	J7HXG5	Pseudomonas_phage	57.1	1.6e-46
WP_023205068.1|1579549_1579945_+	hypothetical protein	NA	I6RSK8	Salmonella_phage	96.9	6.7e-67
WP_001650226.1|1579941_1580328_+	hypothetical protein	NA	I6R9A6	Salmonella_phage	100.0	2.0e-68
WP_020838525.1|1580343_1580889_+	HNH endonuclease	NA	A0A2H4FNF1	Salmonella_phage	46.3	3.6e-34
WP_001650225.1|1580893_1581634_+	immunoglobulin domain-containing protein	NA	H6WRU1	Salmonella_phage	96.3	9.8e-128
WP_023205069.1|1581678_1582332_+	hypothetical protein	NA	H6WRU2	Salmonella_phage	99.5	1.3e-120
WP_000065269.1|1582553_1583282_+	KilA-N domain-containing protein	NA	H6WRU3	Salmonella_phage	100.0	3.1e-142
WP_000414200.1|1583650_1583812_+	hypothetical protein	NA	A0A077KAX5	Edwardsiella_phage	98.1	1.6e-22
WP_023205071.1|1583801_1584668_+	hypothetical protein	NA	B6SD57	Bacteriophage	53.2	1.3e-67
WP_001187765.1|1584732_1585521_+	ORF6N domain-containing protein	NA	H6WRU9	Salmonella_phage	100.0	5.2e-127
WP_117160639.1|1585951_1586302_+	hypothetical protein	NA	H6WRV1	Salmonella_phage	100.0	5.2e-63
WP_016062812.1|1586294_1586597_+	hypothetical protein	NA	H6WRV2	Salmonella_phage	100.0	3.3e-42
WP_108429728.1|1586751_1587003_+	hypothetical protein	NA	H6WRV3	Salmonella_phage	100.0	2.2e-39
1586866:1586881	attL	GGTAATTATCCGGCGA	NA	NA	NA	NA
WP_016062814.1|1587016_1587331_+	membrane lipoprotein lipid attachment site-containing protein	NA	H6WRV4	Salmonella_phage	100.0	2.8e-52
WP_023205072.1|1587391_1589578_+	tape measure protein	NA	H6WRV7	Salmonella_phage	94.9	9.5e-304
WP_001747800.1|1589599_1589815_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001747799.1|1589870_1590218_+|tail	phage tail protein	tail	H6WRV8	Salmonella_phage	97.4	5.7e-62
WP_016062819.1|1590228_1590435_+	hypothetical protein	NA	H6WRV9	Salmonella_phage	100.0	5.3e-31
WP_001650217.1|1590403_1590619_-	hypothetical protein	NA	H6WRW0	Salmonella_phage	100.0	2.1e-30
WP_006754904.1|1590784_1591489_+|tail	phage minor tail protein L	tail	H6WRW1	Salmonella_phage	100.0	8.4e-137
WP_020838539.1|1591488_1592208_+	C40 family peptidase	NA	Q5G8W2	Enterobacteria_phage	93.3	3.9e-137
WP_023205073.1|1592150_1592678_+|tail	tail assembly protein	tail	I6RSM0	Salmonella_phage	95.2	3.8e-65
WP_023205074.1|1592687_1595870_+|tail	phage tail protein	tail	H6WRW4	Salmonella_phage	93.4	0.0e+00
WP_001113925.1|1595878_1596838_+	hypothetical protein	NA	H6WRW5	Salmonella_phage	100.0	9.6e-184
WP_023205075.1|1596848_1597979_+|tail	tail fiber domain-containing protein	tail	S4TSP4	Salmonella_phage	99.7	1.1e-202
WP_000973018.1|1598185_1598299_-	DinI-like family protein	NA	S4TND2	Salmonella_phage	83.8	2.1e-10
WP_000958645.1|1598326_1599496_-|integrase	tyrosine-type recombinase/integrase	integrase	C6ZR22	Salmonella_phage	90.0	2.3e-211
WP_001590337.1|1599810_1600752_-	formate/nitrite transporter family protein	NA	E7DYY8	Enterobacteria_phage	87.8	4.1e-147
WP_000776787.1|1601040_1601796_+	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA	NA
WP_001518618.1|1601856_1603164_-	long-chain fatty acid transporter FadL	NA	NA	NA	NA	NA
WP_000030904.1|1603534_1603819_+	YfcZ/YiiS family protein	NA	NA	NA	NA	NA
WP_001650209.1|1603994_1605305_+	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA	NA
WP_023205076.1|1605304_1607452_+	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA	NA
1606028:1606043	attR	GGTAATTATCCGGCGA	NA	NA	NA	NA
WP_023205077.1|1607660_1608146_+	phosphohistidine phosphatase SixA	NA	NA	NA	NA	NA
WP_000730794.1|1608245_1608797_-	endonuclease SmrB	NA	NA	NA	NA	NA
WP_001650203.1|1608962_1609895_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_001650202.1|1609930_1611016_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	47.8	5.3e-90
WP_000750429.1|1611019_1611844_+	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA	NA
WP_001650199.1|1611843_1612653_+	TSUP family transporter	NA	NA	NA	NA	NA
WP_001650198.1|1612652_1613201_+	elongation factor P hydroxylase	NA	NA	NA	NA	NA
WP_000559749.1|1613233_1613509_+	YfcL family protein	NA	NA	NA	NA	NA
WP_001650197.1|1613560_1615561_-|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	tRNA	NA	NA	NA	NA
WP_000817161.1|1615720_1616935_+	beta-ketoacyl-ACP synthase I	NA	NA	NA	NA	NA
WP_001142914.1|1617032_1617689_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000847540.1|1617755_1618274_-	YbjP/YqhG family protein	NA	NA	NA	NA	NA
WP_052346925.1|1618273_1618642_-	CHAP domain-containing protein	NA	D5GVH7	Campylobacter_virus	38.6	1.9e-07
WP_023205079.1|1618920_1619214_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000127730.1|1619393_1620572_+	MFS transporter	NA	NA	NA	NA	NA
WP_000553395.1|1620568_1621570_-	flagella biosynthesis regulator Flk	NA	NA	NA	NA	NA
WP_000699178.1|1621673_1622810_+	4-phosphoerythronate dehydrogenase PdxB	NA	A0A2R8FDS8	Brazilian_cedratvirus	29.1	3.8e-22
WP_001650189.1|1622877_1623891_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_001650188.1|1623890_1624703_+|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
>prophage 4
NZ_CP016837	Salmonella enterica subsp. enterica serovar Senftenberg strain 775W (ATCC 43845) chromosome, complete genome	4920660	1841749	1850920	4920660	tRNA	Enterobacteria_phage(66.67%)	10	NA	NA
WP_000569166.1|1841749_1842697_+	ABC transporter ATP-binding protein	NA	F2Y1V5	Organic_Lake_phycodnavirus	27.8	3.7e-10
WP_001650057.1|1842680_1843412_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_001261696.1|1843392_1843500_-	protein YohO	NA	NA	NA	NA	NA
WP_001240418.1|1843559_1844291_-	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	87.9	4.5e-101
WP_000272850.1|1844513_1846199_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	91.3	4.8e-279
WP_000598637.1|1846195_1846915_+	two-component system response regulator BtsR	NA	NA	NA	NA	NA
WP_000950413.1|1846961_1847429_+	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	90.3	3.9e-74
WP_023194466.1|1847485_1848016_-	YehR family lipoprotein	NA	NA	NA	NA	NA
WP_000703137.1|1848187_1848646_-	YehR family lipoprotein	NA	Q9EYF5	Enterobacteria_phage	72.5	8.4e-53
WP_001834389.1|1848886_1850920_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	27.6	1.0e-54
>prophage 5
NZ_CP016837	Salmonella enterica subsp. enterica serovar Senftenberg strain 775W (ATCC 43845) chromosome, complete genome	4920660	1930933	1937230	4920660		Enterobacteria_phage(50.0%)	6	NA	NA
WP_023205661.1|1930933_1932337_+	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	26.5	3.1e-21
WP_000981469.1|1932514_1933408_+	GalU regulator GalF	NA	A0A127AW70	Bacillus_phage	42.2	4.8e-44
WP_023205660.1|1933784_1934870_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.9	3.6e-102
WP_001023659.1|1934869_1935769_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.0	5.1e-30
WP_001612007.1|1935816_1936695_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	64.1	3.9e-107
WP_001649977.1|1936699_1937230_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	55.9	6.9e-51
>prophage 6
NZ_CP016837	Salmonella enterica subsp. enterica serovar Senftenberg strain 775W (ATCC 43845) chromosome, complete genome	4920660	4338242	4395765	4920660	transposase,integrase	uncultured_Caudovirales_phage(21.74%)	54	4384429:4384443	4405881:4405895
WP_006781417.1|4338242_4339244_-|integrase	site-specific integrase	integrase	M1TW19	Prochlorococcus_phage	21.4	4.9e-05
WP_006781415.1|4339301_4340945_-	TraI domain-containing protein	NA	NA	NA	NA	NA
WP_006781413.1|4341011_4342520_-	ATP-dependent helicase	NA	A0A075DXT4	Acinetobacter_phage	31.1	7.0e-48
WP_023205794.1|4342648_4343332_-	N-6 DNA methylase	NA	A0A2K9V411	Faecalibacterium_phage	39.6	6.0e-31
WP_006781409.1|4343440_4344373_-	DUF1281 domain-containing protein	NA	NA	NA	NA	NA
WP_006781408.1|4344478_4345465_-	DUF1738 domain-containing protein	NA	A0A1V0EEV1	Caulobacter_phage	40.7	4.9e-50
WP_006781405.1|4345546_4345894_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006781404.1|4345961_4346564_-	DUF3085 domain-containing protein	NA	NA	NA	NA	NA
WP_006781402.1|4346639_4347287_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006781400.1|4347371_4347737_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154283625.1|4348199_4348568_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020899206.1|4349157_4350138_-|transposase	IS5-like element ISKpn26 family transposase	transposase	A0A077SK28	Escherichia_phage	98.8	1.2e-184
WP_004388336.1|4351064_4351499_-	copper resistance system metallochaperone PcoE	NA	NA	NA	NA	NA
WP_006785898.1|4351714_4353115_-	copper resistance membrane spanning protein PcoS	NA	W8CYF6	Bacillus_phage	26.6	3.2e-18
WP_001188930.1|4353111_4353792_-	copper response regulator transcription factor PcoR	NA	W8CYM9	Bacillus_phage	34.4	8.7e-30
WP_000998778.1|4353846_4354776_-	copper resistance inner membrane protein PcoD	NA	NA	NA	NA	NA
WP_000025662.1|4354780_4355161_-	copper resistance system metallochaperone PcoC	NA	NA	NA	NA	NA
WP_020899208.1|4355200_4356097_-	copper resistance outer membrane transporter PcoB	NA	NA	NA	NA	NA
WP_000925242.1|4356096_4357914_-	multicopper oxidase PcoA	NA	NA	NA	NA	NA
WP_001023257.1|4358147_4358597_+	copper resistance protein	NA	NA	NA	NA	NA
WP_004118669.1|4358885_4359623_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A8ATH6	Listeria_phage	41.0	3.6e-13
WP_000843497.1|4359656_4359854_-	DUF2933 domain-containing protein	NA	NA	NA	NA	NA
WP_129244003.1|4359894_4362366_-	Ag(+)-translocating P-type ATPase SilP	NA	A0A218MNH6	uncultured_virus	35.1	2.2e-83
WP_002436620.1|4362463_4362904_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000574021.1|4362990_4366137_-	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	NA	NA	NA	NA	NA
WP_001485328.1|4366147_4367440_-	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	NA	NA	NA
WP_001246153.1|4367553_4367907_-	cation efflux system protein CusF	NA	NA	NA	NA	NA
WP_162992105.1|4368023_4369236_+|transposase	IS3 family transposase	transposase	Q6H9S3	Enterobacteria_phage	99.7	8.4e-169
WP_076707666.1|4369276_4370635_-	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	NA	NA	NA
WP_000697968.1|4370824_4371505_+	copper/silver response regulator transcription factor SilR	NA	W8CYM9	Bacillus_phage	36.0	2.7e-31
WP_000555738.1|4371497_4372973_+	copper/silver sensor histidine kinase SilS	NA	W8CYF6	Bacillus_phage	29.3	1.9e-26
WP_006785880.1|4373222_4373654_+	silver-binding protein SilE	NA	NA	NA	NA	NA
WP_006785879.1|4373802_4374153_+	DUF305 domain-containing protein	NA	A0A218MND9	uncultured_virus	52.4	1.0e-18
WP_006785878.1|4374319_4374952_-	hypothetical protein	NA	NA	NA	NA	NA
WP_087464944.1|4375015_4376163_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	91.9	4.3e-146
WP_020899211.1|4376567_4377185_+	recombinase family protein	NA	NA	NA	NA	NA
WP_006786007.1|4377253_4378153_-|integrase	integrase domain-containing protein	integrase	NA	NA	NA	NA
WP_020899212.1|4379084_4379783_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020899213.1|4379843_4380389_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006786005.1|4380541_4381576_-	translesion error-prone DNA polymerase V subunit UmuC	NA	F1C5A5	Cronobacter_phage	58.2	8.9e-111
WP_023202697.1|4381625_4382900_-	translesion error-prone DNA polymerase V subunit UmuC	NA	F1C5A5	Cronobacter_phage	60.0	4.4e-144
WP_006786002.1|4382941_4383382_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	53.3	3.6e-29
WP_006786000.1|4383575_4384475_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
4384429:4384443	attL	ATGACCAGCCTGAAG	NA	NA	NA	NA
WP_020899215.1|4384573_4385101_+	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	37.1	7.2e-16
WP_006785998.1|4385097_4386330_+	MFS transporter	NA	NA	NA	NA	NA
WP_006785996.1|4386378_4386714_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_023202699.1|4386719_4387433_+	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	71.7	1.2e-95
WP_006785993.1|4387489_4387918_-	glutaredoxin-dependent arsenate reductase	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	70.0	6.2e-50
WP_006785992.1|4387967_4389251_-	arsenic transporter	NA	A0A2H4J144	uncultured_Caudovirales_phage	75.1	2.9e-175
WP_006785991.1|4389347_4389701_-	metalloregulator ArsR/SmtB family transcription factor	NA	A0A2H4J145	uncultured_Caudovirales_phage	57.3	2.2e-21
WP_006785990.1|4389963_4390422_-	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_165612122.1|4390603_4393132_+	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	45.4	2.2e-134
WP_006785988.1|4393209_4393509_+	DUF305 domain-containing protein	NA	NA	NA	NA	NA
WP_006785987.1|4393638_4395765_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
4405881:4405895	attR	CTTCAGGCTGGTCAT	NA	NA	NA	NA
>prophage 7
NZ_CP016837	Salmonella enterica subsp. enterica serovar Senftenberg strain 775W (ATCC 43845) chromosome, complete genome	4920660	4555468	4602551	4920660	tRNA,tail,plate	Burkholderia_phage(36.36%)	49	NA	NA
WP_001182229.1|4555468_4556467_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_001039337.1|4556554_4557865_-	conjugal transfer protein TraF	NA	NA	NA	NA	NA
WP_000416272.1|4558111_4558627_+	zinc uptake transcriptional repressor Zur	NA	NA	NA	NA	NA
WP_001030592.1|4558725_4558935_-	CsbD family protein	NA	NA	NA	NA	NA
WP_010989093.1|4558956_4559070_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001128113.1|4559066_4560392_-	MATE family efflux transporter DinF	NA	NA	NA	NA	NA
WP_000646079.1|4560570_4561179_-	repressor LexA	NA	Q9G0C2	Lactococcus_phage	38.0	1.0e-13
WP_000002902.1|4561287_4561656_-	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_000017360.1|4561826_4564247_+	glycerol-3-phosphate 1-O-acyltransferase PlsB	NA	NA	NA	NA	NA
WP_000455249.1|4564345_4565218_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA	NA
WP_000019219.1|4565231_4565729_-	chorismate lyase	NA	NA	NA	NA	NA
WP_000782497.1|4565909_4566827_-	maltose operon protein MalM	NA	NA	NA	NA	NA
WP_000973644.1|4566990_4568349_-	maltoporin	NA	NA	NA	NA	NA
WP_000179176.1|4568436_4569546_-	maltose/maltodextrin ABC transporter ATP-binding protein MalK	NA	Q6GZ03	Mycoplasma_phage	47.2	6.2e-17
WP_001651229.1|4569907_4571098_+	maltose/maltodextrin ABC transporter substrate-binding protein MalE	NA	NA	NA	NA	NA
WP_023205186.1|4571229_4572774_+	maltose ABC transporter permease MalF	NA	NA	NA	NA	NA
WP_001252081.1|4572788_4573679_+	maltose ABC transporter permease MalG	NA	NA	NA	NA	NA
WP_000982752.1|4573844_4574255_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA	NA
WP_000750805.1|4574397_4576494_-	YjbH domain-containing protein	NA	NA	NA	NA	NA
WP_001651227.1|4576493_4577231_-	capsule biosynthesis GfcC family protein	NA	NA	NA	NA	NA
WP_023888164.1|4577227_4577896_-	YjbF family lipoprotein	NA	NA	NA	NA	NA
WP_001541297.1|4577929_4578172_-	outer membrane protein	NA	NA	NA	NA	NA
WP_000790027.1|4578615_4580265_-	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_000136392.1|4580653_4582003_+	lysine-sensitive aspartokinase 3	NA	NA	NA	NA	NA
WP_001651225.1|4582130_4582478_-	hypothetical protein	NA	Q6QIE8	Burkholderia_phage	52.6	7.5e-22
WP_001226440.1|4583053_4583341_+	membrane protein	NA	Q6QIC8	Burkholderia_phage	48.1	5.1e-16
WP_001270435.1|4583343_4583949_+	lytic transglycosylase domain-containing protein	NA	Q5ZQZ1	Pseudomonas_phage	59.9	2.5e-60
WP_000777266.1|4583961_4584276_+	membrane protein	NA	Q6QIC4	Burkholderia_phage	49.1	6.4e-20
WP_000449438.1|4584434_4584890_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000875314.1|4584886_4585084_+	hypothetical protein	NA	Q6QIB1	Burkholderia_phage	52.9	8.6e-07
WP_000729849.1|4585073_4586501_+|tail	phage tail sheath family protein	tail	A4JWK5	Burkholderia_virus	70.9	1.8e-194
WP_000907495.1|4586500_4587025_+|tail	phage major tail tube protein	tail	Q6QIA9	Burkholderia_phage	69.5	2.8e-68
WP_001003638.1|4587076_4587394_+|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_001651222.1|4587353_4587482_+|tail	GpE family phage tail protein	tail	NA	NA	NA	NA
WP_023205187.1|4587578_4589933_+|tail	phage tail tape measure protein	tail	A4JWL0	Burkholderia_virus	30.5	1.2e-65
WP_023205188.1|4589932_4590886_+|tail	phage tail protein	tail	A4JWL1	Burkholderia_virus	50.8	3.9e-36
WP_001269717.1|4590885_4591095_+|tail	tail protein X	tail	A4JWL2	Burkholderia_virus	60.3	9.8e-17
WP_000818149.1|4591082_4592126_+	phage late control D family protein	NA	A4JWL3	Burkholderia_virus	45.9	5.0e-77
WP_001651220.1|4592135_4592858_+|plate	phage baseplate assembly protein V	plate	A0A067ZIM2	Vibrio_phage	42.0	3.9e-12
WP_023205189.1|4593184_4593547_+	GtrA family protein	NA	I1TED9	Salmonella_phage	70.0	4.0e-42
WP_001651217.1|4593543_4594473_+	glycosyltransferase family 2 protein	NA	S5FKN0	Shigella_phage	84.1	6.7e-150
WP_023205190.1|4594472_4596020_+	hypothetical protein	NA	B9UDL6	Salmonella_phage	29.9	1.5e-48
WP_001093501.1|4596183_4596543_+	GPW/gp25 family protein	NA	Q6QIA0	Burkholderia_phage	64.2	2.8e-35
WP_023205192.1|4596533_4597649_+|plate	baseplate J/gp47 family protein	plate	Q6QI99	Burkholderia_phage	52.0	6.9e-101
WP_023205193.1|4597641_4598274_+|tail	phage tail protein I	tail	Q6QI98	Burkholderia_phage	56.4	6.6e-24
WP_023205194.1|4598276_4600022_+|tail	tail fiber protein	tail	A0A0M3ULH6	Salmonella_phage	40.2	1.4e-52
WP_044133443.1|4600026_4600632_+	DUF4376 domain-containing protein	NA	NA	NA	NA	NA
WP_001651210.1|4600628_4601084_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000587743.1|4601822_4602551_+	hypothetical protein	NA	A0A292GAQ8	Xanthomonas_phage	28.2	3.5e-13
>prophage 1
NZ_CP016838	Salmonella enterica subsp. enterica serovar Senftenberg strain 775W (ATCC 43845) plasmid pSSE-ATCC-43845, complete sequence	341373	60327	117080	341373	holin,transposase,protease,integrase	Escherichia_phage(35.29%)	51	57553:57569	94693:94709
57553:57569	attL	CCGCACCACCATCATGA	NA	NA	NA	NA
WP_000795947.1|60327_61503_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_001285422.1|61673_61886_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001232449.1|62246_63329_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001284313.1|63495_64995_-	kinase	NA	NA	NA	NA	NA
WP_000081622.1|65020_66658_-	protein phosphatase 2C domain-containing protein	NA	NA	NA	NA	NA
WP_001253653.1|66657_67698_-	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_001253658.1|67783_68422_-	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_000116681.1|68421_69063_-	TerD family protein	NA	NA	NA	NA	NA
WP_001388628.1|69085_69724_-	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_023205056.1|70186_70654_-	tellurium resistance protein TerW	NA	NA	NA	NA	NA
WP_000797366.1|71889_72846_-	HpcH/HpaI aldolase/citrate lyase family protein	NA	NA	NA	NA	NA
WP_024146380.1|72845_73925_-|protease	cysteine protease StiP family protein	protease	A0A172Q0S8	Acinetobacter_phage	34.1	4.7e-38
WP_001040059.1|73926_74700_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001285478.1|74692_75835_-	phosphoribosyltransferase domain-containing protein	NA	A0A172Q0Y1	Acinetobacter_phage	35.4	1.7e-30
WP_001035162.1|75844_76903_-	ATP-grasp domain-containing protein	NA	NA	NA	NA	NA
WP_000254136.1|77225_77807_+	TerD family protein	NA	K4JRX3	Caulobacter_phage	30.0	6.3e-13
WP_001054787.1|77806_78964_+	TerD family protein	NA	NA	NA	NA	NA
WP_000007448.1|78986_79442_+	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_000255079.1|79464_80505_+	tellurium resistance membrane protein TerC	NA	K7QKE8	Escherichia_phage	48.0	2.2e-77
WP_000116677.1|80553_81132_+	tellurium resistance membrane protein TerD	NA	A0A2P1N0L4	Streptomyces_phage	40.0	3.3e-06
WP_076707723.1|81199_81775_+	TerD family protein	NA	K4JRX3	Caulobacter_phage	41.6	8.7e-31
WP_001053338.1|82203_83445_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_000077926.1|84007_84289_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000398480.1|84338_84530_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001151575.1|84621_84963_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000156884.1|85540_86563_-|transposase	IS110-like element IS5708 family transposase	transposase	NA	NA	NA	NA
WP_023205627.1|87707_89099_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_023165838.1|90150_91152_-	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_001567358.1|92182_92887_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	99.6	2.0e-138
WP_016236905.1|93213_93714_+	non-heme ferritin-like protein	NA	NA	NA	NA	NA
WP_167493975.1|95300_95669_+|transposase	transposase	transposase	NA	NA	NA	NA
94693:94709	attR	TCATGATGGTGGTGCGG	NA	NA	NA	NA
WP_000545263.1|96423_97977_-	L-lactate permease	NA	NA	NA	NA	NA
WP_023205089.1|98413_100111_+	D-lactate dehydrogenase	NA	NA	NA	NA	NA
WP_001102107.1|100185_100905_+	(Fe-S)-binding protein	NA	NA	NA	NA	NA
WP_000023895.1|100915_102343_+	iron-sulfur cluster-binding protein	NA	NA	NA	NA	NA
WP_000370412.1|102335_103031_+	lactate utilization protein C	NA	NA	NA	NA	NA
WP_000558568.1|103671_103983_+	type II toxin-antitoxin system HigB family toxin	NA	NA	NA	NA	NA
WP_000990392.1|103979_104399_+	helix-turn-helix domain-containing protein	NA	A0A222YXG1	Escherichia_phage	31.4	1.8e-06
WP_023205090.1|104435_105638_-	hypothetical protein	NA	A0A222YXT1	Escherichia_phage	63.4	3.9e-126
WP_000121260.1|105630_105960_-	hypothetical protein	NA	A0A222YYR0	Escherichia_phage	66.0	1.8e-36
WP_000611681.1|105956_106478_-	hypothetical protein	NA	A0A222YZ79	Escherichia_phage	53.8	6.4e-49
WP_044133241.1|107039_107633_-	hypothetical protein	NA	Q5QBN4	Enterobacteria_phage	45.0	3.0e-34
WP_001114073.1|107948_108302_+	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	A0A2H4J145	uncultured_Caudovirales_phage	50.0	4.1e-23
WP_000783215.1|108349_108712_+	arsenite efflux transporter metallochaperone ArsD	NA	NA	NA	NA	NA
WP_001556710.1|108729_110481_+	arsenite efflux transporter ATPase subunit ArsA	NA	NA	NA	NA	NA
WP_000922630.1|110529_111819_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4J144	uncultured_Caudovirales_phage	73.5	2.5e-171
WP_000065758.1|111831_112257_+	glutaredoxin-dependent arsenate reductase	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	70.7	1.2e-50
WP_001567357.1|112287_112692_-	arsenic transporter ATPase	NA	NA	NA	NA	NA
WP_024223555.1|112700_113042_-	helix-turn-helix domain-containing protein	NA	Q1MVP4	Enterobacteria_phage	85.5	2.0e-27
WP_000625672.1|113741_115019_-	DUF2254 domain-containing protein	NA	NA	NA	NA	NA
WP_008325030.1|115082_117080_-|holin	choline BCCT transporter BetT	holin	A0A2I7QNT1	Vibrio_phage	26.2	2.0e-21
>prophage 2
NZ_CP016838	Salmonella enterica subsp. enterica serovar Senftenberg strain 775W (ATCC 43845) plasmid pSSE-ATCC-43845, complete sequence	341373	124628	184549	341373	transposase,protease,integrase	Escherichia_phage(35.29%)	52	134649:134666	190315:190332
WP_023205292.1|124628_126164_-|transposase	IS66 family transposase	transposase	A0A0P0ZBS5	Stx2-converting_phage	87.9	5.3e-261
WP_000609174.1|126213_126561_-	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZDM8	Stx2-converting_phage	95.7	2.7e-59
WP_001201739.1|126557_126941_-	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZCV4	Stx2-converting_phage	36.3	4.1e-13
WP_021553337.1|127498_128923_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023205290.1|128919_131859_-	AAA family ATPase	NA	A0A2K9L5A2	Tupanvirus	23.8	1.3e-21
WP_021553335.1|131899_132157_-	DNA polymerase III subunit theta	NA	Q71T70	Escherichia_phage	81.3	4.4e-27
WP_021553334.1|132156_132444_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172697046.1|132720_132951_-|transposase	transposase	transposase	A0A077SK28	Escherichia_phage	96.1	8.8e-35
WP_001567358.1|133327_134032_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	99.6	2.0e-138
WP_001295708.1|134479_134743_+	hypothetical protein	NA	NA	NA	NA	NA
134649:134666	attL	TCGTCTGGGCGCGCCCAG	NA	NA	NA	NA
WP_004118812.1|134936_135218_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_004152117.1|135252_135822_+	small heat shock protein sHSP20	NA	NA	NA	NA	NA
WP_000101613.1|135927_138777_+	heat shock survival AAA family ATPase ClpK	NA	K4FB40	Cronobacter_phage	41.2	1.2e-128
WP_001295707.1|138776_138968_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023205099.1|139714_139855_+|protease	ATP-dependent metalloprotease FtsH	protease	NA	NA	NA	NA
WP_001275372.1|139942_140401_+	small heat shock protein sHSP20-GI	NA	NA	NA	NA	NA
WP_001022486.1|140423_141338_+	heat resistance protein YfdX1	NA	NA	NA	NA	NA
WP_001721696.1|141440_142328_+	heat resistance protein YfdX2	NA	NA	NA	NA	NA
WP_001090783.1|142424_143036_+	heat resistance membrane protein HdeD-GI	NA	NA	NA	NA	NA
WP_001723515.1|143115_144261_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000786816.1|144250_144691_+	heat resistance system thioredoxin Trx-GI	NA	A0A023NHA9	Dinoroseobacter_phage	34.7	2.6e-11
WP_016156527.1|144694_146410_+	heat resistance system K+/H+ antiporter KefB-GI	NA	NA	NA	NA	NA
WP_000843382.1|146406_146904_+	heat resistance protein PsiE-GI	NA	NA	NA	NA	NA
WP_001721693.1|146881_147847_+|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_009364894.1|148117_148822_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	99.6	4.0e-139
WP_001084040.1|149361_151425_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_000085085.1|151421_152813_-	SIR2 family protein	NA	NA	NA	NA	NA
WP_001196201.1|152889_153471_-	recombinase family protein	NA	Q1MVP4	Enterobacteria_phage	48.9	5.5e-41
WP_000718520.1|153629_156638_+|transposase	Tn3 family transposase	transposase	Q1MVP5	Enterobacteria_phage	64.6	0.0e+00
WP_023205287.1|156878_157271_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024136327.1|157874_158168_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000088046.1|158172_159498_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_000134171.1|159558_159765_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000985911.1|159866_160277_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001572439.1|160289_161105_+	HNH endonuclease	NA	G0X580	Salmonella_phage	36.5	1.1e-15
WP_001043843.1|161358_161784_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001224687.1|162332_162641_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000784387.1|162656_163514_+	HNH endonuclease	NA	G0X580	Salmonella_phage	34.2	3.9e-11
WP_001287391.1|164120_164525_-	H-NS histone family protein	NA	NA	NA	NA	NA
WP_016246540.1|166686_167289_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024555186.1|167517_168657_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_001567358.1|168703_169408_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	99.6	2.0e-138
WP_000167917.1|169591_170515_-	cation transporter	NA	NA	NA	NA	NA
WP_001515348.1|170714_171287_-	cytochrome b/b6 domain-containing protein	NA	NA	NA	NA	NA
WP_023205293.1|171762_173001_-|transposase	IS110 family transposase	transposase	A0A0U3ULR1	Bacillus_phage	23.1	3.3e-11
WP_009652557.1|175516_175798_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_023205297.1|175801_177166_+	PTS Galactitol IIC component	NA	NA	NA	NA	NA
WP_023205298.1|177162_177618_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_023205299.1|177668_177995_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000019445.1|179345_180326_+|transposase	IS5-like element ISKpn26 family transposase	transposase	A0A077SK28	Escherichia_phage	99.4	1.0e-185
WP_000017067.1|181647_182475_+|transposase	heteromeric transposase endonuclease subunit TnsA	transposase	NA	NA	NA	NA
WP_001324683.1|182488_184549_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
190315:190332	attR	CTGGGCGCGCCCAGACGA	NA	NA	NA	NA
