assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001975025.1_ASM197502v1	NZ_CP015588	Streptomyces alfalfae strain ACCC40021 chromosome, complete genome	1	1249188-1249371	1	PILER-CR	no		csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	Orphan	GGCGCGGACGCCTCCCGCACCG	22	0	0	NA	NA	NA	2	2	Orphan	csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	NA|181aa|up_8|NZ_CP015588.1_1235299_1235842_-,NA|492aa|up_4|NZ_CP015588.1_1241172_1242648_+,NA|164aa|up_1|NZ_CP015588.1_1245005_1245497_+,NA|53aa|up_0|NZ_CP015588.1_1245493_1245652_+,NA	NA|568aa|up_9|NZ_CP015588.1_1233512_1235216_+	pfam13699, DUF4157, Domain of unknown function (DUF4157)	NA|181aa|up_8|NZ_CP015588.1_1235299_1235842_-	NA	NA|226aa|up_7|NZ_CP015588.1_1237585_1238263_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|215aa|up_6|NZ_CP015588.1_1238363_1239008_+	pfam14065, DUF4255, Protein of unknown function (DUF4255)	NA|705aa|up_5|NZ_CP015588.1_1239004_1241119_+	COG0464, SpoVK, ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones]	NA|492aa|up_4|NZ_CP015588.1_1241172_1242648_+	NA	NA|522aa|up_3|NZ_CP015588.1_1242881_1244447_+	COG3497, COG3497, Phage tail sheath protein FI [General function prediction only]	NA|148aa|up_2|NZ_CP015588.1_1244562_1245006_+	TIGR02241, hypothetical_protein_SCD8A	NA|164aa|up_1|NZ_CP015588.1_1245005_1245497_+	NA	NA|53aa|up_0|NZ_CP015588.1_1245493_1245652_+	NA	NA|142aa|down_0|NZ_CP015588.1_1250361_1250787_+	pfam06841, Phage_T4_gp19, T4-like virus tail tube protein gp19	NA|243aa|down_1|NZ_CP015588.1_1250795_1251524_+	cd00118, LysM, Lysin Motif is a small domain involved in binding peptidoglycan	NA|635aa|down_2|NZ_CP015588.1_1251523_1253428_+	TIGR03361, VI_Rhs_Vgr, type VI secretion system Vgr family protein	NA|152aa|down_3|NZ_CP015588.1_1253427_1253883_+	pfam04965, GPW_gp25, Gene 25-like lysozyme	NA|653aa|down_4|NZ_CP015588.1_1253883_1255842_+	TIGR02243, hypothetical_protein_SCD8A	NA|191aa|down_5|NZ_CP015588.1_1255838_1256411_+	TIGR02242, putative_secreted_protein, phage tail protein domain	NA|337aa|down_6|NZ_CP015588.1_1257780_1258791_-	COG0492, TrxB, Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]	NA|214aa|down_7|NZ_CP015588.1_1258875_1259517_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|232aa|down_8|NZ_CP015588.1_1259520_1260216_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|267aa|down_9|NZ_CP015588.1_1260387_1261188_+	cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs
GCF_001975025.1_ASM197502v1	NZ_CP015588	Streptomyces alfalfae strain ACCC40021 chromosome, complete genome	2	1881363-1882611	1,1,2	CRISPRCasFinder,CRT,PILER-CR	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	Type I-E	CGGCTCACCTCCGCTCGCGCGGAGAGCAC,CGGCTCACCTCCGCTCGCGCGGAGAGCAC,CGGCTCACCTCCGCTCGCGCGGAGAGCAC	29,29,29	0	0	NA	NA	NA:NA:NA	20,20,19	20	TypeI-E	csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	NA|180aa|up_9|NZ_CP015588.1_1869897_1870437_+,NA|207aa|up_7|NZ_CP015588.1_1872028_1872649_+,NA|79aa|up_3|NZ_CP015588.1_1877020_1877257_+,NA	NA|180aa|up_9|NZ_CP015588.1_1869897_1870437_+	NA	NA|380aa|up_8|NZ_CP015588.1_1870531_1871671_+	cd04724, Tryptophan_synthase_alpha, Ttryptophan synthase (TRPS) alpha subunit (TSA)	NA|207aa|up_7|NZ_CP015588.1_1872028_1872649_+	NA	NA|424aa|up_6|NZ_CP015588.1_1872645_1873917_+	COG0270, Dcm, Site-specific DNA methylase [DNA replication, recombination, and repair]	NA|353aa|up_5|NZ_CP015588.1_1873982_1875041_+	pfam00772, DnaB, DnaB-like helicase N terminal domain	NA|454aa|up_4|NZ_CP015588.1_1875107_1876469_+	pfam03771, SPDY, Domain of unknown function (DUF317)	NA|79aa|up_3|NZ_CP015588.1_1877020_1877257_+	NA	NA|277aa|up_2|NZ_CP015588.1_1877602_1878433_+	pfam04672, Methyltransf_19, S-adenosyl methyltransferase	NA|304aa|up_1|NZ_CP015588.1_1878422_1879334_-	pfam13560, HTH_31, Helix-turn-helix domain	NA|76aa|up_0|NZ_CP015588.1_1879422_1879650_-	pfam04149, DUF397, Domain of unknown function (DUF397)	cas3|956aa|down_0|NZ_CP015588.1_1882782_1885650_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|537aa|down_1|NZ_CP015588.1_1885813_1887424_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|251aa|down_2|NZ_CP015588.1_1887420_1888173_+	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|392aa|down_3|NZ_CP015588.1_1888243_1889419_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|288aa|down_4|NZ_CP015588.1_1889415_1890279_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas6e|221aa|down_5|NZ_CP015588.1_1890275_1890938_+	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas1|331aa|down_6|NZ_CP015588.1_1890934_1891927_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|104aa|down_7|NZ_CP015588.1_1891952_1892264_+	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	NA|376aa|down_8|NZ_CP015588.1_1897257_1898385_+	pfam17964, Big_10, Bacterial Ig domain	NA|532aa|down_9|NZ_CP015588.1_1898526_1900122_+	pfam02129, Peptidase_S15, X-Pro dipeptidyl-peptidase (S15 family)
GCF_001975025.1_ASM197502v1	NZ_CP015588	Streptomyces alfalfae strain ACCC40021 chromosome, complete genome	3	1892283-1894629	3,2,2,4	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	Type I-E	CGGCTCACCTCCGCTCGCGCGGAGAGCAC,GTGCTCTCCGCGCGAGCGGAGGTGAGCCG,GTGCTCTCCGCGCGAGCGGAGGTGAGCCG,CGGCTCACCTCCGCTCGCGCGGAGAGCAC	29,29,29,29	0	0	NA	NA	NA:NA:NA:NA	35,38,38,35	38	TypeI-E	csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	NA,NA|149aa|down_6|NZ_CP015588.1_1903556_1904003_-,NA|288aa|down_9|NZ_CP015588.1_1905445_1906309_-	NA|304aa|up_9|NZ_CP015588.1_1878422_1879334_-	pfam13560, HTH_31, Helix-turn-helix domain	NA|76aa|up_8|NZ_CP015588.1_1879422_1879650_-	pfam04149, DUF397, Domain of unknown function (DUF397)	cas3|956aa|up_7|NZ_CP015588.1_1882782_1885650_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|537aa|up_6|NZ_CP015588.1_1885813_1887424_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|251aa|up_5|NZ_CP015588.1_1887420_1888173_+	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|392aa|up_4|NZ_CP015588.1_1888243_1889419_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|288aa|up_3|NZ_CP015588.1_1889415_1890279_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas6e|221aa|up_2|NZ_CP015588.1_1890275_1890938_+	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas1|331aa|up_1|NZ_CP015588.1_1890934_1891927_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|104aa|up_0|NZ_CP015588.1_1891952_1892264_+	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	NA|376aa|down_0|NZ_CP015588.1_1897257_1898385_+	pfam17964, Big_10, Bacterial Ig domain	NA|532aa|down_1|NZ_CP015588.1_1898526_1900122_+	pfam02129, Peptidase_S15, X-Pro dipeptidyl-peptidase (S15 family)	NA|294aa|down_2|NZ_CP015588.1_1900177_1901059_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|215aa|down_3|NZ_CP015588.1_1901055_1901700_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|309aa|down_4|NZ_CP015588.1_1901709_1902636_-	cd13690, PBP2_GluB, Substrate binding domain of ABC glutamate transporter; the type 2 periplasmic binding protein fold	NA|248aa|down_5|NZ_CP015588.1_1902652_1903396_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|149aa|down_6|NZ_CP015588.1_1903556_1904003_-	NA	NA|209aa|down_7|NZ_CP015588.1_1904374_1905001_+	pfam05239, PRC, PRC-barrel domain	NA|145aa|down_8|NZ_CP015588.1_1905000_1905435_+	COG3881, COG3881, PRC-barrel domain containing protein [General function prediction only]	NA|288aa|down_9|NZ_CP015588.1_1905445_1906309_-	NA
GCF_001975025.1_ASM197502v1	NZ_CP015588	Streptomyces alfalfae strain ACCC40021 chromosome, complete genome	4	1895484-1895817	5,3,3,4	PILER-CR,CRISPRCasFinder,CRT,CRISPRCasFinder	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	Type I-E	CGGCTCACCTCCGCTCGCGCGGAGAGCAC,GTGCTCTCCGCGCGAGCGGAGGTGAGCCG,GTGCTCTCCGNGCGAGCGGAGGTNAGCCGNNN,GTGCTCTCCGCGCGAGCGGAGGTGAGCCG	29,29,32,29	0	0	NA	NA	NA:NA:NA:NA	4,3,5,3	5	TypeI-E	csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	NA,NA|149aa|down_6|NZ_CP015588.1_1903556_1904003_-,NA|288aa|down_9|NZ_CP015588.1_1905445_1906309_-	NA|304aa|up_9|NZ_CP015588.1_1878422_1879334_-	pfam13560, HTH_31, Helix-turn-helix domain	NA|76aa|up_8|NZ_CP015588.1_1879422_1879650_-	pfam04149, DUF397, Domain of unknown function (DUF397)	cas3|956aa|up_7|NZ_CP015588.1_1882782_1885650_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|537aa|up_6|NZ_CP015588.1_1885813_1887424_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|251aa|up_5|NZ_CP015588.1_1887420_1888173_+	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|392aa|up_4|NZ_CP015588.1_1888243_1889419_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|288aa|up_3|NZ_CP015588.1_1889415_1890279_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas6e|221aa|up_2|NZ_CP015588.1_1890275_1890938_+	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas1|331aa|up_1|NZ_CP015588.1_1890934_1891927_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|104aa|up_0|NZ_CP015588.1_1891952_1892264_+	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	NA|376aa|down_0|NZ_CP015588.1_1897257_1898385_+	pfam17964, Big_10, Bacterial Ig domain	NA|532aa|down_1|NZ_CP015588.1_1898526_1900122_+	pfam02129, Peptidase_S15, X-Pro dipeptidyl-peptidase (S15 family)	NA|294aa|down_2|NZ_CP015588.1_1900177_1901059_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|215aa|down_3|NZ_CP015588.1_1901055_1901700_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|309aa|down_4|NZ_CP015588.1_1901709_1902636_-	cd13690, PBP2_GluB, Substrate binding domain of ABC glutamate transporter; the type 2 periplasmic binding protein fold	NA|248aa|down_5|NZ_CP015588.1_1902652_1903396_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|149aa|down_6|NZ_CP015588.1_1903556_1904003_-	NA	NA|209aa|down_7|NZ_CP015588.1_1904374_1905001_+	pfam05239, PRC, PRC-barrel domain	NA|145aa|down_8|NZ_CP015588.1_1905000_1905435_+	COG3881, COG3881, PRC-barrel domain containing protein [General function prediction only]	NA|288aa|down_9|NZ_CP015588.1_1905445_1906309_-	NA
GCF_001975025.1_ASM197502v1	NZ_CP015588	Streptomyces alfalfae strain ACCC40021 chromosome, complete genome	5	1931599-1931716	5	CRISPRCasFinder	no		csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	Orphan	CCGCGCAGCGGCGGCCCTGCCCCTACGGCACCCGTAGACCACGG	44	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	NA|69aa|up_5|NZ_CP015588.1_1925976_1926183_+,NA|99aa|down_6|NZ_CP015588.1_1937952_1938249_-,NA|302aa|down_9|NZ_CP015588.1_1941164_1942070_-	NA|335aa|up_9|NZ_CP015588.1_1922259_1923264_+	TIGR04380, hypothetical_protein_HOLDEFILI_04020, inositol 2-dehydrogenase	NA|153aa|up_8|NZ_CP015588.1_1923282_1923741_-	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria	NA|224aa|up_7|NZ_CP015588.1_1923885_1924557_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|422aa|up_6|NZ_CP015588.1_1924553_1925819_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|69aa|up_5|NZ_CP015588.1_1925976_1926183_+	NA	NA|140aa|up_4|NZ_CP015588.1_1926226_1926646_-	cd00607, RNase_Sa, RNase_Sa	NA|247aa|up_3|NZ_CP015588.1_1926902_1927643_+	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated	NA|377aa|up_2|NZ_CP015588.1_1927747_1928878_-	PRK13257, PRK13257, allantoicase; Provisional	NA|459aa|up_1|NZ_CP015588.1_1928882_1930259_-	TIGR03178, allantoinase, allantoinase	NA|270aa|up_0|NZ_CP015588.1_1930632_1931442_+	COG1414, IclR, Transcriptional regulator [Transcription]	NA|260aa|down_0|NZ_CP015588.1_1931799_1932579_-	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|362aa|down_1|NZ_CP015588.1_1932575_1933661_-	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane]	NA|408aa|down_2|NZ_CP015588.1_1933916_1935140_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|223aa|down_3|NZ_CP015588.1_1935136_1935805_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|181aa|down_4|NZ_CP015588.1_1935836_1936379_-	cd00293, USP_Like, Usp: Universal stress protein family	NA|490aa|down_5|NZ_CP015588.1_1936455_1937925_+	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|99aa|down_6|NZ_CP015588.1_1937952_1938249_-	NA	NA|209aa|down_7|NZ_CP015588.1_1938496_1939123_+	cd04182, GT_2_like_f, GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function	NA|540aa|down_8|NZ_CP015588.1_1939349_1940969_+	PRK09255, PRK09255, malate synthase; Validated	NA|302aa|down_9|NZ_CP015588.1_1941164_1942070_-	NA
GCF_001975025.1_ASM197502v1	NZ_CP015588	Streptomyces alfalfae strain ACCC40021 chromosome, complete genome	6	1973464-1973553	6	CRISPRCasFinder	no		csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	Orphan	GGGGCGCGAGGAACCGCACACCGAGCCAC	29	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	NA,NA|83aa|down_1|NZ_CP015588.1_1975789_1976038_-,NA|125aa|down_2|NZ_CP015588.1_1976687_1977062_+	NA|470aa|up_9|NZ_CP015588.1_1963463_1964873_-	PRK08203, PRK08203, hydroxydechloroatrazine ethylaminohydrolase; Reviewed	NA|477aa|up_8|NZ_CP015588.1_1964915_1966346_-	TIGR03173, pbuX, xanthine permease	NA|311aa|up_7|NZ_CP015588.1_1966410_1967343_-	TIGR03383, Structure_Of_Uricase, urate oxidase	NA|136aa|up_6|NZ_CP015588.1_1967349_1967757_-	pfam00576, Transthyretin, HIUase/Transthyretin family	NA|172aa|up_5|NZ_CP015588.1_1967753_1968269_-	PRK13798, PRK13798, putative OHCU decarboxylase; Provisional	NA|126aa|up_4|NZ_CP015588.1_1968534_1968912_-	pfam13309, HTH_22, HTH domain	NA|93aa|up_3|NZ_CP015588.1_1968908_1969187_-	pfam01910, Thiamine_BP, Thiamine-binding protein	NA|276aa|up_2|NZ_CP015588.1_1969312_1970140_+	TIGR03234, OH-pyruv-isom, hydroxypyruvate isomerase	NA|297aa|up_1|NZ_CP015588.1_1970235_1971126_+	TIGR01505, 2-hydroxy-3-oxopropionate_reductase, 2-hydroxy-3-oxopropionate reductase	NA|486aa|up_0|NZ_CP015588.1_1971362_1972820_+	cd08156, catalase_clade_3, Clade 3 of the heme-binding enzyme catalase	NA|593aa|down_0|NZ_CP015588.1_1973699_1975478_-	PRK11269, PRK11269, glyoxylate carboligase; Provisional	NA|83aa|down_1|NZ_CP015588.1_1975789_1976038_-	NA	NA|125aa|down_2|NZ_CP015588.1_1976687_1977062_+	NA	NA|224aa|down_3|NZ_CP015588.1_1977191_1977863_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|547aa|down_4|NZ_CP015588.1_1977852_1979493_-	PRK08315, PRK08315, AMP-binding domain protein; Validated	NA|570aa|down_5|NZ_CP015588.1_1979489_1981199_-	cd05974, MACS_like_1, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS)	NA|278aa|down_6|NZ_CP015588.1_1981442_1982276_+	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|389aa|down_7|NZ_CP015588.1_1982772_1983939_-	pfam06224, HTH_42, Winged helix DNA-binding domain	NA|387aa|down_8|NZ_CP015588.1_1984099_1985260_+	cd12830, MtCorA-like, Mycobacterium tuberculosis CorA-like subfamily	NA|677aa|down_9|NZ_CP015588.1_1985347_1987378_-	pfam01145, Band_7, SPFH domain / Band 7 family
GCF_001975025.1_ASM197502v1	NZ_CP015588	Streptomyces alfalfae strain ACCC40021 chromosome, complete genome	7	2714903-2715012	7	CRISPRCasFinder	no		csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	Orphan	CAGGGGGCGGTGGACTTGGCGGGGCGGTGAGC	32	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	NA,NA	NA|286aa|up_9|NZ_CP015588.1_2703702_2704560_-	TIGR03083, TIGR03083, uncharacterized Actinobacterial protein TIGR03083	NA|343aa|up_8|NZ_CP015588.1_2704653_2705682_-	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|570aa|up_7|NZ_CP015588.1_2705681_2707391_-	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]	NA|354aa|up_6|NZ_CP015588.1_2707366_2708428_-	cd13545, PBP2_TbpA, Substrate binding domain of thiamin transporter, a member of the type 2 periplasmic binding fold superfamily	NA|369aa|up_5|NZ_CP015588.1_2708738_2709845_-	PRK14459, PRK14459, ribosomal RNA large subunit methyltransferase N; Provisional	NA|366aa|up_4|NZ_CP015588.1_2709940_2711038_-	pfam01148, CTP_transf_1, Cytidylyltransferase family	NA|186aa|up_3|NZ_CP015588.1_2711080_2711638_-	PRK00083, frr, ribosome recycling factor; Reviewed	NA|255aa|up_2|NZ_CP015588.1_2711794_2712559_-	PRK00358, pyrH, uridylate kinase; Provisional	NA|279aa|up_1|NZ_CP015588.1_2712758_2713595_-	PRK09377, tsf, elongation factor Ts; Provisional	NA|300aa|up_0|NZ_CP015588.1_2713696_2714596_-	PRK05299, rpsB, 30S ribosomal protein S2; Provisional	NA|186aa|down_0|NZ_CP015588.1_2716070_2716628_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|281aa|down_1|NZ_CP015588.1_2716734_2717577_-	PRK06288, PRK06288, RNA polymerase sigma factor WhiG; Reviewed	NA|387aa|down_2|NZ_CP015588.1_2717922_2719083_-	COG0758, Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion]	NA|540aa|down_3|NZ_CP015588.1_2719079_2720699_-	COG0606, COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones]	NA|136aa|down_4|NZ_CP015588.1_2720698_2721106_-	PRK12497, PRK12497, YraN family protein	NA|103aa|down_5|NZ_CP015588.1_2721232_2721541_-	pfam10611, DUF2469, Protein of unknown function (DUF2469)	NA|170aa|down_6|NZ_CP015588.1_2721596_2722106_-	cd04685, Nudix_Hydrolase_26, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|250aa|down_7|NZ_CP015588.1_2722095_2722845_-	TIGR02227, Inactive_signal_peptidase_IA	NA|321aa|down_8|NZ_CP015588.1_2722924_2723887_-	TIGR02227, Inactive_signal_peptidase_IA	NA|360aa|down_9|NZ_CP015588.1_2723771_2724851_-	TIGR02227, Inactive_signal_peptidase_IA
GCF_001975025.1_ASM197502v1	NZ_CP015588	Streptomyces alfalfae strain ACCC40021 chromosome, complete genome	8	2807775-2807878	8	CRISPRCasFinder	no		csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	Orphan	CGCCCGTGGTCGCTCGCGCAGTTCCCCGCGCCCCCGGG	38	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	NA|107aa|up_6|NZ_CP015588.1_2801176_2801497_-,NA|64aa|up_0|NZ_CP015588.1_2807393_2807585_+,NA|117aa|down_8|NZ_CP015588.1_2818299_2818650_+	NA|451aa|up_9|NZ_CP015588.1_2796473_2797826_-	pfam16208, Keratin_2_head, Keratin type II head	NA|535aa|up_8|NZ_CP015588.1_2797914_2799519_-	PRK12344, PRK12344, putative alpha-isopropylmalate/homocitrate synthase family transferase; Provisional	NA|416aa|up_7|NZ_CP015588.1_2799849_2801097_-	COG0823, TolB, Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]	NA|107aa|up_6|NZ_CP015588.1_2801176_2801497_-	NA	NA|205aa|up_5|NZ_CP015588.1_2801614_2802229_-	pfam13977, TetR_C_6, BetI-type transcriptional repressor, C-terminal	NA|347aa|up_4|NZ_CP015588.1_2802243_2803284_-	pfam04371, PAD_porph, Porphyromonas-type peptidyl-arginine deiminase	NA|574aa|up_3|NZ_CP015588.1_2803294_2805016_-	PRK13207, ureC, urease subunit alpha; Reviewed	NA|235aa|up_2|NZ_CP015588.1_2805012_2805717_-	PRK13192, PRK13192, bifunctional urease subunit gamma/beta; Reviewed	NA|482aa|up_1|NZ_CP015588.1_2805898_2807344_+	pfam02133, Transp_cyt_pur, Permease for cytosine/purines, uracil, thiamine, allantoin	NA|64aa|up_0|NZ_CP015588.1_2807393_2807585_+	NA	NA|364aa|down_0|NZ_CP015588.1_2807921_2809013_-	PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional	NA|350aa|down_1|NZ_CP015588.1_2809258_2810308_-	PRK03437, PRK03437, 3-isopropylmalate dehydrogenase; Provisional	NA|530aa|down_2|NZ_CP015588.1_2810460_2812050_+	cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain	NA|176aa|down_3|NZ_CP015588.1_2812657_2813185_-	pfam13527, Acetyltransf_9, Acetyltransferase (GNAT) domain	NA|236aa|down_4|NZ_CP015588.1_2813404_2814112_+	cd02144, iodotyrosine_dehalogenase, iodotyrosine dehalogenase	NA|544aa|down_5|NZ_CP015588.1_2814210_2815842_-	cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17	NA|309aa|down_6|NZ_CP015588.1_2815896_2816823_-	COG0506, PutA, Proline dehydrogenase [Amino acid transport and metabolism]	NA|404aa|down_7|NZ_CP015588.1_2816983_2818195_+	pfam13556, HTH_30, PucR C-terminal helix-turn-helix domain	NA|117aa|down_8|NZ_CP015588.1_2818299_2818650_+	NA	NA|196aa|down_9|NZ_CP015588.1_2818757_2819345_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family
GCF_001975025.1_ASM197502v1	NZ_CP015588	Streptomyces alfalfae strain ACCC40021 chromosome, complete genome	9	3347245-3347321	9	CRISPRCasFinder	no		csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	Orphan	CCCCGAGGCCTCTCGGCCCCCTC	23	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	NA|64aa|up_7|NZ_CP015588.1_3338595_3338787_-,NA|122aa|up_4|NZ_CP015588.1_3342492_3342858_+,NA	NA|478aa|up_9|NZ_CP015588.1_3335848_3337282_-	TIGR00895, transport_protein, benzoate transport	NA|367aa|up_8|NZ_CP015588.1_3337281_3338382_-	cd03506, Delta6-FADS-like, The Delta6 Fatty Acid Desaturase (Delta6-FADS)-like CD includes the integral-membrane enzymes: delta-4, delta-5, delta-6, delta-8, delta-8-sphingolipid, and delta-11 desaturases found in vertebrates, higher plants, fungi, and bacteria	NA|64aa|up_7|NZ_CP015588.1_3338595_3338787_-	NA	NA|331aa|up_6|NZ_CP015588.1_3338839_3339832_-	pfam09924, DUF2156, Uncharacterized conserved protein (DUF2156)	NA|264aa|up_5|NZ_CP015588.1_3340823_3341615_+	cd15831, BTAD, Bacterial Transcriptional Activation (BTA) domain	NA|122aa|up_4|NZ_CP015588.1_3342492_3342858_+	NA	NA|515aa|up_3|NZ_CP015588.1_3342955_3344500_+	TIGR01117, methylmalonyl-CoA_decarboxylase_alpha-subunit, methylmalonyl-CoA decarboxylase alpha subunit	NA|62aa|up_2|NZ_CP015588.1_3344528_3344714_+	pfam13822, ACC_epsilon, Acyl-CoA carboxylase epsilon subunit	NA|219aa|up_1|NZ_CP015588.1_3344804_3345461_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|458aa|up_0|NZ_CP015588.1_3345457_3346831_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|338aa|down_0|NZ_CP015588.1_3348285_3349299_+	COG1277, NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component [General function prediction only]	NA|139aa|down_1|NZ_CP015588.1_3349925_3350342_-	cd18755, PIN_MtVapC3_VapC21-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC3, VapC21 and related proteins	NA|84aa|down_2|NZ_CP015588.1_3350338_3350590_-	pfam09957, VapB_antitoxin, Bacterial antitoxin of type II TA system, VapB	NA|363aa|down_3|NZ_CP015588.1_3351114_3352203_-	PRK09601, PRK09601, redox-regulated ATPase YchF	NA|247aa|down_4|NZ_CP015588.1_3353122_3353863_-	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|328aa|down_5|NZ_CP015588.1_3354123_3355107_-	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed	NA|461aa|down_6|NZ_CP015588.1_3355204_3356587_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|417aa|down_7|NZ_CP015588.1_3356788_3358039_+	TIGR00237, exodeoxyribonuclease_VII_large_subunit, exodeoxyribonuclease VII, large subunit	NA|88aa|down_8|NZ_CP015588.1_3358048_3358312_+	PRK00977, PRK00977, exodeoxyribonuclease VII small subunit; Provisional	NA|197aa|down_9|NZ_CP015588.1_3358568_3359159_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional
GCF_001975025.1_ASM197502v1	NZ_CP015588	Streptomyces alfalfae strain ACCC40021 chromosome, complete genome	10	3471720-3471806	10	CRISPRCasFinder	no		csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	Orphan	CACGGACCGCAGACACAGCGACCAC	25	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	NA|134aa|up_6|NZ_CP015588.1_3463430_3463832_-,NA	NA|525aa|up_9|NZ_CP015588.1_3460802_3462377_+	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]	NA|69aa|up_8|NZ_CP015588.1_3462399_3462606_+	pfam13822, ACC_epsilon, Acyl-CoA carboxylase epsilon subunit	NA|202aa|up_7|NZ_CP015588.1_3462844_3463450_+	PRK00148, PRK00148, Maf-like protein; Reviewed	NA|134aa|up_6|NZ_CP015588.1_3463430_3463832_-	NA	NA|592aa|up_5|NZ_CP015588.1_3464203_3465979_+	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism]	NA|205aa|up_4|NZ_CP015588.1_3466464_3467079_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|325aa|up_3|NZ_CP015588.1_3467136_3468111_-	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|483aa|up_2|NZ_CP015588.1_3468287_3469736_-	PRK07845, PRK07845, flavoprotein disulfide reductase; Reviewed	NA|146aa|up_1|NZ_CP015588.1_3469857_3470295_+	pfam13772, AIG2_2, AIG2-like family	NA|275aa|up_0|NZ_CP015588.1_3470406_3471231_+	PRK08202, PRK08202, purine nucleoside phosphorylase; Provisional	NA|548aa|down_0|NZ_CP015588.1_3472008_3473652_+	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1)	NA|403aa|down_1|NZ_CP015588.1_3473880_3475089_+	COG5542, COG5542, Predicted integral membrane protein [Function unknown]	NA|214aa|down_2|NZ_CP015588.1_3475198_3475840_-	pfam10756, bPH_6, Bacterial PH domain	NA|313aa|down_3|NZ_CP015588.1_3477229_3478168_+	cd00959, DeoC, 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family	NA|479aa|down_4|NZ_CP015588.1_3478173_3479610_+	cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like	NA|295aa|down_5|NZ_CP015588.1_3479602_3480487_+	pfam00171, Aldedh, Aldehyde dehydrogenase family	NA|138aa|down_6|NZ_CP015588.1_3480558_3480972_-	pfam16013, DUF4781, Domain of unknown function (DUF4781)	NA|213aa|down_7|NZ_CP015588.1_3481188_3481827_+	COG0572, Udk, Uridine kinase [Nucleotide transport and metabolism]	NA|242aa|down_8|NZ_CP015588.1_3482046_3482772_-	TIGR02983, putative_RNA_polymerase_ECF-subfamily_sigma_factor, RNA polymerase sigma-70 factor, sigma-E family	NA|226aa|down_9|NZ_CP015588.1_3482988_3483666_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]
GCF_001975025.1_ASM197502v1	NZ_CP015588	Streptomyces alfalfae strain ACCC40021 chromosome, complete genome	11	3812324-3812418	11	CRISPRCasFinder	no		csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	Orphan	GCCTCGCTCGCCGCCCGGCTCAGCCTGCGGC	31	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	NA|195aa|up_9|NZ_CP015588.1_3799481_3800066_+,NA|85aa|up_8|NZ_CP015588.1_3800250_3800505_+,NA|360aa|up_7|NZ_CP015588.1_3800806_3801886_+,NA|281aa|up_6|NZ_CP015588.1_3801906_3802749_+,NA|88aa|up_5|NZ_CP015588.1_3802770_3803034_+,NA|152aa|up_4|NZ_CP015588.1_3803079_3803535_+,NA	NA|195aa|up_9|NZ_CP015588.1_3799481_3800066_+	NA	NA|85aa|up_8|NZ_CP015588.1_3800250_3800505_+	NA	NA|360aa|up_7|NZ_CP015588.1_3800806_3801886_+	NA	NA|281aa|up_6|NZ_CP015588.1_3801906_3802749_+	NA	NA|88aa|up_5|NZ_CP015588.1_3802770_3803034_+	NA	NA|152aa|up_4|NZ_CP015588.1_3803079_3803535_+	NA	NA|1490aa|up_3|NZ_CP015588.1_3803601_3808071_+	TIGR03928, T7_EssCb_Firm, type VII secretion protein EssC, C-terminal domain	NA|92aa|up_2|NZ_CP015588.1_3808136_3808412_-	pfam06013, WXG100, Proteins of 100 residues with WXG	NA|265aa|up_1|NZ_CP015588.1_3810786_3811581_-	cd13634, PBP2_Sco4506, The conserved hypothetical protein SCO4506 exhibits the type 2 periplasmic-binidng protein fold	NA|68aa|up_0|NZ_CP015588.1_3811976_3812180_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|270aa|down_0|NZ_CP015588.1_3813293_3814103_-	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|318aa|down_1|NZ_CP015588.1_3814099_3815053_-	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|282aa|down_2|NZ_CP015588.1_3815056_3815902_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|316aa|down_3|NZ_CP015588.1_3815898_3816846_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|553aa|down_4|NZ_CP015588.1_3816861_3818520_-	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|395aa|down_5|NZ_CP015588.1_3818516_3819701_-	pfam03417, AAT, Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase	NA|303aa|down_6|NZ_CP015588.1_3819823_3820732_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|195aa|down_7|NZ_CP015588.1_3820753_3821338_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|224aa|down_8|NZ_CP015588.1_3821563_3822235_+	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism]	NA|105aa|down_9|NZ_CP015588.1_3822231_3822546_+	pfam05437, AzlD, Branched-chain amino acid transport protein (AzlD)
GCF_001975025.1_ASM197502v1	NZ_CP015588	Streptomyces alfalfae strain ACCC40021 chromosome, complete genome	12	3812523-3812759	12	CRISPRCasFinder	no		csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	Orphan	GCCTCGCTCGCCGCCCGGCTCAGCCTGCGGC	31	0	0	NA	NA	NA	2	2	Orphan	csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	NA|195aa|up_9|NZ_CP015588.1_3799481_3800066_+,NA|85aa|up_8|NZ_CP015588.1_3800250_3800505_+,NA|360aa|up_7|NZ_CP015588.1_3800806_3801886_+,NA|281aa|up_6|NZ_CP015588.1_3801906_3802749_+,NA|88aa|up_5|NZ_CP015588.1_3802770_3803034_+,NA|152aa|up_4|NZ_CP015588.1_3803079_3803535_+,NA	NA|195aa|up_9|NZ_CP015588.1_3799481_3800066_+	NA	NA|85aa|up_8|NZ_CP015588.1_3800250_3800505_+	NA	NA|360aa|up_7|NZ_CP015588.1_3800806_3801886_+	NA	NA|281aa|up_6|NZ_CP015588.1_3801906_3802749_+	NA	NA|88aa|up_5|NZ_CP015588.1_3802770_3803034_+	NA	NA|152aa|up_4|NZ_CP015588.1_3803079_3803535_+	NA	NA|1490aa|up_3|NZ_CP015588.1_3803601_3808071_+	TIGR03928, T7_EssCb_Firm, type VII secretion protein EssC, C-terminal domain	NA|92aa|up_2|NZ_CP015588.1_3808136_3808412_-	pfam06013, WXG100, Proteins of 100 residues with WXG	NA|265aa|up_1|NZ_CP015588.1_3810786_3811581_-	cd13634, PBP2_Sco4506, The conserved hypothetical protein SCO4506 exhibits the type 2 periplasmic-binidng protein fold	NA|68aa|up_0|NZ_CP015588.1_3811976_3812180_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|270aa|down_0|NZ_CP015588.1_3813293_3814103_-	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|318aa|down_1|NZ_CP015588.1_3814099_3815053_-	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|282aa|down_2|NZ_CP015588.1_3815056_3815902_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|316aa|down_3|NZ_CP015588.1_3815898_3816846_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|553aa|down_4|NZ_CP015588.1_3816861_3818520_-	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|395aa|down_5|NZ_CP015588.1_3818516_3819701_-	pfam03417, AAT, Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase	NA|303aa|down_6|NZ_CP015588.1_3819823_3820732_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|195aa|down_7|NZ_CP015588.1_3820753_3821338_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|224aa|down_8|NZ_CP015588.1_3821563_3822235_+	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism]	NA|105aa|down_9|NZ_CP015588.1_3822231_3822546_+	pfam05437, AzlD, Branched-chain amino acid transport protein (AzlD)
GCF_001975025.1_ASM197502v1	NZ_CP015588	Streptomyces alfalfae strain ACCC40021 chromosome, complete genome	13	3812856-3812949	13	CRISPRCasFinder	no		csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	Orphan	GCCTCGCTCGCCGCCCGGCTCAGCCTGCGGC	31	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	NA|195aa|up_9|NZ_CP015588.1_3799481_3800066_+,NA|85aa|up_8|NZ_CP015588.1_3800250_3800505_+,NA|360aa|up_7|NZ_CP015588.1_3800806_3801886_+,NA|281aa|up_6|NZ_CP015588.1_3801906_3802749_+,NA|88aa|up_5|NZ_CP015588.1_3802770_3803034_+,NA|152aa|up_4|NZ_CP015588.1_3803079_3803535_+,NA	NA|195aa|up_9|NZ_CP015588.1_3799481_3800066_+	NA	NA|85aa|up_8|NZ_CP015588.1_3800250_3800505_+	NA	NA|360aa|up_7|NZ_CP015588.1_3800806_3801886_+	NA	NA|281aa|up_6|NZ_CP015588.1_3801906_3802749_+	NA	NA|88aa|up_5|NZ_CP015588.1_3802770_3803034_+	NA	NA|152aa|up_4|NZ_CP015588.1_3803079_3803535_+	NA	NA|1490aa|up_3|NZ_CP015588.1_3803601_3808071_+	TIGR03928, T7_EssCb_Firm, type VII secretion protein EssC, C-terminal domain	NA|92aa|up_2|NZ_CP015588.1_3808136_3808412_-	pfam06013, WXG100, Proteins of 100 residues with WXG	NA|265aa|up_1|NZ_CP015588.1_3810786_3811581_-	cd13634, PBP2_Sco4506, The conserved hypothetical protein SCO4506 exhibits the type 2 periplasmic-binidng protein fold	NA|68aa|up_0|NZ_CP015588.1_3811976_3812180_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|270aa|down_0|NZ_CP015588.1_3813293_3814103_-	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|318aa|down_1|NZ_CP015588.1_3814099_3815053_-	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|282aa|down_2|NZ_CP015588.1_3815056_3815902_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|316aa|down_3|NZ_CP015588.1_3815898_3816846_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|553aa|down_4|NZ_CP015588.1_3816861_3818520_-	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|395aa|down_5|NZ_CP015588.1_3818516_3819701_-	pfam03417, AAT, Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase	NA|303aa|down_6|NZ_CP015588.1_3819823_3820732_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|195aa|down_7|NZ_CP015588.1_3820753_3821338_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|224aa|down_8|NZ_CP015588.1_3821563_3822235_+	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism]	NA|105aa|down_9|NZ_CP015588.1_3822231_3822546_+	pfam05437, AzlD, Branched-chain amino acid transport protein (AzlD)
GCF_001975025.1_ASM197502v1	NZ_CP015588	Streptomyces alfalfae strain ACCC40021 chromosome, complete genome	14	3826068-3826150	14	CRISPRCasFinder	no		csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	Orphan	GGCGGCGAATGCCTCGAAGCCGC	23	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	NA|143aa|up_4|NZ_CP015588.1_3822697_3823126_+,NA|48aa|up_3|NZ_CP015588.1_3823476_3823620_+,NA	NA|395aa|up_9|NZ_CP015588.1_3818516_3819701_-	pfam03417, AAT, Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase	NA|303aa|up_8|NZ_CP015588.1_3819823_3820732_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|195aa|up_7|NZ_CP015588.1_3820753_3821338_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|224aa|up_6|NZ_CP015588.1_3821563_3822235_+	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism]	NA|105aa|up_5|NZ_CP015588.1_3822231_3822546_+	pfam05437, AzlD, Branched-chain amino acid transport protein (AzlD)	NA|143aa|up_4|NZ_CP015588.1_3822697_3823126_+	NA	NA|48aa|up_3|NZ_CP015588.1_3823476_3823620_+	NA	NA|324aa|up_2|NZ_CP015588.1_3823616_3824588_+	cd02110, SO_family_Moco_dimer, Subgroup of sulfite oxidase (SO) family molybdopterin binding domains that contains conserved dimerization domain	NA|149aa|up_1|NZ_CP015588.1_3824580_3825027_-	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains	NA|289aa|up_0|NZ_CP015588.1_3825153_3826020_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|471aa|down_0|NZ_CP015588.1_3826427_3827840_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|289aa|down_1|NZ_CP015588.1_3828148_3829015_+	pfam17765, MLTR_LBD, MmyB-like transcription regulator ligand binding domain	NA|537aa|down_2|NZ_CP015588.1_3829033_3830644_-	pfam08386, Abhydrolase_4, TAP-like protein	NA|210aa|down_3|NZ_CP015588.1_3830732_3831362_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|464aa|down_4|NZ_CP015588.1_3831564_3832956_-	COG1301, GltP, Na+/H+-dicarboxylate symporters [Energy production and conversion]	NA|109aa|down_5|NZ_CP015588.1_3833348_3833675_-	pfam14012, DUF4229, Protein of unknown function (DUF4229)	NA|175aa|down_6|NZ_CP015588.1_3833785_3834310_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|388aa|down_7|NZ_CP015588.1_3834317_3835481_-	TIGR03700, mena_SCO4494, putative menaquinone biosynthesis radical SAM enzyme, SCO4494 family	NA|152aa|down_8|NZ_CP015588.1_3835577_3836033_-	smart00344, HTH_ASNC, helix_turn_helix ASNC type	NA|232aa|down_9|NZ_CP015588.1_3836301_3836997_-	COG0163, UbiX family flavin prenyltransferase [Coenzyme transport and metabolism]
GCF_001975025.1_ASM197502v1	NZ_CP015588	Streptomyces alfalfae strain ACCC40021 chromosome, complete genome	15	4064724-4064826	15	CRISPRCasFinder	no		csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	Orphan	GACGCCCCGCCACCTCGTCGGCGTC	25	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	NA|139aa|up_6|NZ_CP015588.1_4057813_4058230_-,NA|63aa|down_7|NZ_CP015588.1_4075648_4075837_+	NA|801aa|up_9|NZ_CP015588.1_4050515_4052918_-	PRK00733, hppA, membrane-bound proton-translocating pyrophosphatase; Validated	NA|146aa|up_8|NZ_CP015588.1_4053438_4053876_-	pfam13581, HATPase_c_2, Histidine kinase-like ATPase domain	NA|114aa|up_7|NZ_CP015588.1_4054018_4054360_-	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation	NA|139aa|up_6|NZ_CP015588.1_4057813_4058230_-	NA	NA|46aa|up_5|NZ_CP015588.1_4058216_4058354_-	pfam14029, DUF4244, Protein of unknown function (DUF4244)	NA|260aa|up_4|NZ_CP015588.1_4058624_4059404_-	COG2064, TadC, Flp pilus assembly protein TadC [Cell motility and secretion / Intracellular trafficking and secretion]	NA|282aa|up_3|NZ_CP015588.1_4059400_4060246_-	COG4965, TadB, Flp pilus assembly protein TadB [Intracellular trafficking and secretion]	NA|391aa|up_2|NZ_CP015588.1_4060254_4061427_-	TIGR03819, heli_sec_ATPase, helicase/secretion neighborhood ATPase	NA|380aa|up_1|NZ_CP015588.1_4061423_4062563_-	TIGR03815, CpaE_hom_Actino, helicase/secretion neighborhood CpaE-like protein	NA|275aa|up_0|NZ_CP015588.1_4063128_4063953_+	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|327aa|down_0|NZ_CP015588.1_4065281_4066262_+	cd02034, CooC1, accessory protein CooC1	NA|423aa|down_1|NZ_CP015588.1_4066277_4067546_-	cd10976, CE4_CDA_like_3, Putative catalytic domain of uncharacterized bacterial hypothetical proteins similar to insect chitin deacetylase-like proteins	NA|783aa|down_2|NZ_CP015588.1_4067845_4070194_+	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]	NA|667aa|down_3|NZ_CP015588.1_4070259_4072260_+	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|467aa|down_4|NZ_CP015588.1_4072509_4073910_+	PRK14853, nhaA, pH-dependent sodium/proton antiporter; Provisional	NA|166aa|down_5|NZ_CP015588.1_4073962_4074460_+	pfam07332, Phage_holin_3_6, Putative Actinobacterial Holin-X, holin superfamily III	NA|319aa|down_6|NZ_CP015588.1_4074516_4075473_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|63aa|down_7|NZ_CP015588.1_4075648_4075837_+	NA	NA|402aa|down_8|NZ_CP015588.1_4075891_4077097_-	pfam02674, Colicin_V, Colicin V production protein	NA|276aa|down_9|NZ_CP015588.1_4077146_4077974_-	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes
GCF_001975025.1_ASM197502v1	NZ_CP015588	Streptomyces alfalfae strain ACCC40021 chromosome, complete genome	16	4817128-4817206	16	CRISPRCasFinder	no		csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	Orphan	CGTGGACACGGCTTACGAGGCCGTCTG	27	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	NA|153aa|up_5|NZ_CP015588.1_4811198_4811657_-,NA|131aa|down_9|NZ_CP015588.1_4830996_4831389_+	NA|294aa|up_9|NZ_CP015588.1_4807909_4808791_+	PRK06027, purU, formyltetrahydrofolate deformylase; Reviewed	NA|393aa|up_8|NZ_CP015588.1_4808816_4809995_-	TIGR03083, TIGR03083, uncharacterized Actinobacterial protein TIGR03083	NA|196aa|up_7|NZ_CP015588.1_4809991_4810579_-	PRK12519, PRK12519, RNA polymerase sigma factor; Provisional	NA|125aa|up_6|NZ_CP015588.1_4810817_4811192_+	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation	NA|153aa|up_5|NZ_CP015588.1_4811198_4811657_-	NA	NA|171aa|up_4|NZ_CP015588.1_4811834_4812347_+	pfam13499, EF-hand_7, EF-hand domain pair	NA|536aa|up_3|NZ_CP015588.1_4812356_4813964_-	PRK13295, PRK13295, cyclohexanecarboxylate-CoA ligase; Reviewed	NA|388aa|up_2|NZ_CP015588.1_4814245_4815409_+	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|285aa|up_1|NZ_CP015588.1_4815417_4816272_+	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases	NA|148aa|up_0|NZ_CP015588.1_4816660_4817104_+	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains	NA|325aa|down_0|NZ_CP015588.1_4817570_4818545_-	pfam04199, Cyclase, Putative cyclase	NA|304aa|down_1|NZ_CP015588.1_4818629_4819541_+	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs	NA|437aa|down_2|NZ_CP015588.1_4819549_4820860_+	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|350aa|down_3|NZ_CP015588.1_4820870_4821920_+	cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase	NA|368aa|down_4|NZ_CP015588.1_4822567_4823671_-	PRK09393, ftrA, transcriptional activator FtrA; Provisional	NA|449aa|down_5|NZ_CP015588.1_4823730_4825077_+	cd17355, MFS_YcxA_like, MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters	NA|204aa|down_6|NZ_CP015588.1_4825066_4825678_-	smart00903, Flavin_Reduct, Flavin reductase like domain	NA|312aa|down_7|NZ_CP015588.1_4825741_4826677_-	PRK06688, PRK06688, enoyl-CoA hydratase; Provisional	NA|742aa|down_8|NZ_CP015588.1_4826738_4828964_-	COG1042, COG1042, Acyl-CoA synthetase (NDP forming) [Energy production and conversion]	NA|131aa|down_9|NZ_CP015588.1_4830996_4831389_+	NA
GCF_001975025.1_ASM197502v1	NZ_CP015588	Streptomyces alfalfae strain ACCC40021 chromosome, complete genome	17	5294975-5295049	17	CRISPRCasFinder	no		csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	Orphan	CGGCTCCAACCCCGTCGAGCAGGG	24	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	NA|344aa|up_6|NZ_CP015588.1_5281067_5282099_-,NA|64aa|down_0|NZ_CP015588.1_5295360_5295552_-	NA|1247aa|up_9|NZ_CP015588.1_5272219_5275960_-	pfam04464, Glyphos_transf, CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase	NA|699aa|up_8|NZ_CP015588.1_5276132_5278229_+	pfam04464, Glyphos_transf, CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase	NA|953aa|up_7|NZ_CP015588.1_5278212_5281071_-	cd03820, GT4_AmsD-like, amylovoran biosynthesis glycosyltransferase AmsD and similar proteins	NA|344aa|up_6|NZ_CP015588.1_5281067_5282099_-	NA	NA|294aa|up_5|NZ_CP015588.1_5282229_5283111_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|427aa|up_4|NZ_CP015588.1_5283107_5284388_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|464aa|up_3|NZ_CP015588.1_5284458_5285850_-	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism]	NA|563aa|up_2|NZ_CP015588.1_5289958_5291647_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|412aa|up_1|NZ_CP015588.1_5291786_5293022_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|369aa|up_0|NZ_CP015588.1_5293087_5294194_+	PRK00578, prfB, peptide chain release factor 2; Validated	NA|64aa|down_0|NZ_CP015588.1_5295360_5295552_-	NA	NA|230aa|down_1|NZ_CP015588.1_5295827_5296517_+	COG2884, FtsE, Predicted ATPase involved in cell division [Cell division and chromosome partitioning]	NA|306aa|down_2|NZ_CP015588.1_5296605_5297523_+	COG2177, FtsX, Cell division protein [Cell division and chromosome partitioning]	NA|396aa|down_3|NZ_CP015588.1_5297601_5298789_+	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane]	NA|174aa|down_4|NZ_CP015588.1_5298807_5299329_+	pfam01668, SmpB, SmpB protein	NA|531aa|down_5|NZ_CP015588.1_5299999_5301592_+	pfam02113, Peptidase_S13, D-Ala-D-Ala carboxypeptidase 3 (S13) family	NA|429aa|down_6|NZ_CP015588.1_5301515_5302802_-	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|318aa|down_7|NZ_CP015588.1_5302928_5303882_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|707aa|down_8|NZ_CP015588.1_5305005_5307126_+	cd10962, CE4_GT2-like, Catalytic NodB homology domain of uncharacterized bacterial glycosyl transferase, group 2-like family proteins	NA|412aa|down_9|NZ_CP015588.1_5307122_5308358_+	pfam01757, Acyl_transf_3, Acyltransferase family
GCF_001975025.1_ASM197502v1	NZ_CP015588	Streptomyces alfalfae strain ACCC40021 chromosome, complete genome	18	5634891-5635025	18	CRISPRCasFinder	no		csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	Orphan	GGGCTCCGGTGGCGGTGTCGGGCCTCGCGGCCGGGTGC	38	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	NA|441aa|up_8|NZ_CP015588.1_5623262_5624585_-,NA|107aa|down_3|NZ_CP015588.1_5641916_5642237_+,NA|80aa|down_5|NZ_CP015588.1_5644383_5644623_+	NA|823aa|up_9|NZ_CP015588.1_5620746_5623215_-	pfam16918, PknG_TPR, Protein kinase G tetratricopeptide repeat	NA|441aa|up_8|NZ_CP015588.1_5623262_5624585_-	NA	NA|333aa|up_7|NZ_CP015588.1_5624691_5625690_-	cd13690, PBP2_GluB, Substrate binding domain of ABC glutamate transporter; the type 2 periplasmic binding protein fold	NA|519aa|up_6|NZ_CP015588.1_5625770_5627327_-	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|329aa|up_5|NZ_CP015588.1_5627587_5628574_-	COG2971, COG2971, Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism]	NA|422aa|up_4|NZ_CP015588.1_5628564_5629830_-	cd05296, GH4_P_beta_glucosidase, Glycoside Hydrolases Family 4; Phospho-beta-glucosidase	NA|303aa|up_3|NZ_CP015588.1_5629838_5630747_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|312aa|up_2|NZ_CP015588.1_5630756_5631692_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|443aa|up_1|NZ_CP015588.1_5631711_5633040_-	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold	NA|398aa|up_0|NZ_CP015588.1_5633135_5634329_-	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|360aa|down_0|NZ_CP015588.1_5636477_5637557_-	pfam00924, MS_channel, Mechanosensitive ion channel	NA|179aa|down_1|NZ_CP015588.1_5637883_5638420_+	COG1403, McrA, Restriction endonuclease [Defense mechanisms]	NA|1010aa|down_2|NZ_CP015588.1_5638497_5641527_-	pfam07555, NAGidase, beta-N-acetylglucosaminidase	NA|107aa|down_3|NZ_CP015588.1_5641916_5642237_+	NA	NA|709aa|down_4|NZ_CP015588.1_5642236_5644363_+	pfam02446, Glyco_hydro_77, 4-alpha-glucanotransferase	NA|80aa|down_5|NZ_CP015588.1_5644383_5644623_+	NA	NA|198aa|down_6|NZ_CP015588.1_5644795_5645389_-	pfam17920, TetR_C_16, Tetracyclin repressor-like, C-terminal domain	NA|498aa|down_7|NZ_CP015588.1_5645488_5646982_+	PRK08244, PRK08244, monooxygenase	NA|310aa|down_8|NZ_CP015588.1_5647190_5648120_+	pfam00892, EamA, EamA-like transporter family	NA|304aa|down_9|NZ_CP015588.1_5648171_5649083_+	cd08423, PBP2_LTTR_like_6, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold
GCF_001975025.1_ASM197502v1	NZ_CP015588	Streptomyces alfalfae strain ACCC40021 chromosome, complete genome	19	5799666-5799788	19	CRISPRCasFinder	no		csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	Orphan	TCAAGCCCGTCCGGCGTTTGAGGACGAGCCCGGCGCAGCCGGCGA	45	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	NA,NA|89aa|down_3|NZ_CP015588.1_5803778_5804045_-	NA|368aa|up_9|NZ_CP015588.1_5790127_5791231_+	cd01942, ribokinase_group_A, Ribokinase-like subgroup A	NA|339aa|up_8|NZ_CP015588.1_5791449_5792466_+	COG1702, PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms]	NA|166aa|up_7|NZ_CP015588.1_5792478_5792976_+	PRK00016, PRK00016, metal-binding heat shock protein; Provisional	NA|435aa|up_6|NZ_CP015588.1_5792980_5794285_+	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|119aa|up_5|NZ_CP015588.1_5794281_5794638_+	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown]	NA|305aa|up_4|NZ_CP015588.1_5795416_5796331_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|75aa|up_3|NZ_CP015588.1_5796529_5796754_+	pfam04149, DUF397, Domain of unknown function (DUF397)	NA|476aa|up_2|NZ_CP015588.1_5796804_5798232_-	cd17321, MFS_MMR_MDR_like, Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|297aa|up_1|NZ_CP015588.1_5798323_5799214_+	pfam17765, MLTR_LBD, MmyB-like transcription regulator ligand binding domain	NA|118aa|up_0|NZ_CP015588.1_5799251_5799605_+	PRK05578, PRK05578, cytidine deaminase; Validated	NA|318aa|down_0|NZ_CP015588.1_5799858_5800812_+	PRK00089, era, GTPase Era; Reviewed	NA|413aa|down_1|NZ_CP015588.1_5801115_5802354_-	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|451aa|down_2|NZ_CP015588.1_5802350_5803703_-	TIGR03356, BGL, beta-galactosidase	NA|89aa|down_3|NZ_CP015588.1_5803778_5804045_-	NA	NA|359aa|down_4|NZ_CP015588.1_5804088_5805165_-	cd09597, M4_TLP, Peptidase M4 family including thermolysin, protealysin, aureolysin, and neutral protease	NA|574aa|down_5|NZ_CP015588.1_5805523_5807245_+	PRK03739, PRK03739, 2-isopropylmalate synthase; Validated	NA|251aa|down_6|NZ_CP015588.1_5807431_5808184_+	pfam05099, TerB, Tellurite resistance protein TerB	NA|703aa|down_7|NZ_CP015588.1_5808333_5810442_+	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only]	NA|421aa|down_8|NZ_CP015588.1_5810489_5811752_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|223aa|down_9|NZ_CP015588.1_5811748_5812417_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]
GCF_001975025.1_ASM197502v1	NZ_CP015588	Streptomyces alfalfae strain ACCC40021 chromosome, complete genome	20	5970314-5970409	20	CRISPRCasFinder	no		csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	Orphan	CCGTGTGCCCGGGGTTTCGGCTGT	24	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	NA|90aa|up_8|NZ_CP015588.1_5960086_5960356_-,NA|120aa|up_7|NZ_CP015588.1_5960427_5960787_-,NA|169aa|down_3|NZ_CP015588.1_5974750_5975257_-,NA|544aa|down_7|NZ_CP015588.1_5981569_5983201_-	NA|439aa|up_9|NZ_CP015588.1_5958211_5959528_-	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|90aa|up_8|NZ_CP015588.1_5960086_5960356_-	NA	NA|120aa|up_7|NZ_CP015588.1_5960427_5960787_-	NA	NA|74aa|up_6|NZ_CP015588.1_5960949_5961171_+	pfam10041, DUF2277, Uncharacterized conserved protein (DUF2277)	NA|205aa|up_5|NZ_CP015588.1_5961208_5961823_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|151aa|up_4|NZ_CP015588.1_5962054_5962507_-	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|637aa|up_3|NZ_CP015588.1_5964603_5966514_-	cd07389, MPP_PhoD, Bacillus subtilis PhoD and related proteins, metallophosphatase domain	NA|229aa|up_2|NZ_CP015588.1_5966636_5967323_-	pfam07510, DUF1524, Protein of unknown function (DUF1524)	NA|193aa|up_1|NZ_CP015588.1_5968002_5968581_+	COG2119, COG2119, Predicted membrane protein [Function unknown]	NA|216aa|up_0|NZ_CP015588.1_5968864_5969512_+	cd07527, HAD_ScGPP-like, subfamily of beta-phosphoglucomutase-like family, similar to Saccharomyces cerevisiae DL-glycerol-3-phosphate phosphatase (GPP1p/ Rhr2p and GPP2p/HOR2p) and 2-deoxyglucose-6-phosphate phosphatase (DOG1p and DOG2p)	NA|689aa|down_0|NZ_CP015588.1_5971283_5973350_+	cd17502, MFS_Azr1_MDR_like, Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|177aa|down_1|NZ_CP015588.1_5973383_5973914_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|109aa|down_2|NZ_CP015588.1_5974336_5974663_-	COG2329, COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides [General function prediction only]	NA|169aa|down_3|NZ_CP015588.1_5974750_5975257_-	NA	NA|135aa|down_4|NZ_CP015588.1_5976055_5976460_-	pfam09350, DUF1992, Domain of unknown function (DUF1992)	NA|131aa|down_5|NZ_CP015588.1_5976573_5976966_+	smart00240, FHA, Forkhead associated domain	NA|679aa|down_6|NZ_CP015588.1_5979582_5981619_+	pfam14378, PAP2_3, PAP2 superfamily	NA|544aa|down_7|NZ_CP015588.1_5981569_5983201_-	NA	NA|415aa|down_8|NZ_CP015588.1_5983342_5984587_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|390aa|down_9|NZ_CP015588.1_5984849_5986019_+	PRK07850, PRK07850, steroid 3-ketoacyl-CoA thiolase
GCF_001975025.1_ASM197502v1	NZ_CP015588	Streptomyces alfalfae strain ACCC40021 chromosome, complete genome	21	6026218-6026325	21	CRISPRCasFinder	no		csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	Orphan	TGGCGGCGCGGGGCGCGTGCGTGG	24	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	NA|66aa|up_8|NZ_CP015588.1_6017032_6017230_-,NA|479aa|down_0|NZ_CP015588.1_6028639_6030076_-,NA|339aa|down_5|NZ_CP015588.1_6037304_6038321_-,NA|783aa|down_6|NZ_CP015588.1_6038317_6040666_-,NA|131aa|down_7|NZ_CP015588.1_6040662_6041055_-,NA|103aa|down_8|NZ_CP015588.1_6041112_6041421_-,NA|110aa|down_9|NZ_CP015588.1_6041467_6041797_-	NA|313aa|up_9|NZ_CP015588.1_6016026_6016965_+	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	NA|66aa|up_8|NZ_CP015588.1_6017032_6017230_-	NA	NA|285aa|up_7|NZ_CP015588.1_6018634_6019489_+	pfam01784, NIF3, NIF3 (NGG1p interacting factor 3)	NA|279aa|up_6|NZ_CP015588.1_6019392_6020229_+	COG1579, COG1579, Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only]	NA|457aa|up_5|NZ_CP015588.1_6020241_6021612_+	PRK07238, PRK07238, bifunctional RNase H/acid phosphatase; Provisional	NA|211aa|up_4|NZ_CP015588.1_6021618_6022251_-	PRK05718, PRK05718, keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional	NA|267aa|up_3|NZ_CP015588.1_6022348_6023149_-	PRK02101, PRK02101, peroxide stress protein YaaA	NA|483aa|up_2|NZ_CP015588.1_6023341_6024790_+	COG0557, VacB, Exoribonuclease R [Transcription]	NA|141aa|up_1|NZ_CP015588.1_6025081_6025504_+	pfam14079, DUF4260, Domain of unknown function (DUF4260)	NA|197aa|up_0|NZ_CP015588.1_6025466_6026057_+	pfam13305, WHG, WHG domain	NA|479aa|down_0|NZ_CP015588.1_6028639_6030076_-	NA	NA|1334aa|down_1|NZ_CP015588.1_6030072_6034074_-	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|440aa|down_2|NZ_CP015588.1_6034070_6035390_-	COG0455, flhG, Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility]	NA|460aa|down_3|NZ_CP015588.1_6035404_6036784_-	TIGR03920, T7SS_EccD, type VII secretion integral membrane protein EccD	NA|108aa|down_4|NZ_CP015588.1_6036815_6037139_-	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|339aa|down_5|NZ_CP015588.1_6037304_6038321_-	NA	NA|783aa|down_6|NZ_CP015588.1_6038317_6040666_-	NA	NA|131aa|down_7|NZ_CP015588.1_6040662_6041055_-	NA	NA|103aa|down_8|NZ_CP015588.1_6041112_6041421_-	NA	NA|110aa|down_9|NZ_CP015588.1_6041467_6041797_-	NA
GCF_001975025.1_ASM197502v1	NZ_CP015588	Streptomyces alfalfae strain ACCC40021 chromosome, complete genome	22	6154911-6155061	22	CRISPRCasFinder	no	WYL	csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	Unclear	CCGGTCGTTGTCTGCGGGTGCGTTCGCCTTCGTGCCGCCGCTTCGCGGCG	50	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	NA|481aa|up_7|NZ_CP015588.1_6146242_6147685_+,NA|261aa|down_6|NZ_CP015588.1_6165428_6166211_+	NA|319aa|up_9|NZ_CP015588.1_6144117_6145074_-	PRK05481, PRK05481, lipoyl synthase; Provisional	NA|278aa|up_8|NZ_CP015588.1_6145191_6146025_-	PRK14345, PRK14345, lipoyl(octanoyl) transferase LipB	NA|481aa|up_7|NZ_CP015588.1_6146242_6147685_+	NA	NA|453aa|up_6|NZ_CP015588.1_6147776_6149135_-	pfam01593, Amino_oxidase, Flavin containing amine oxidoreductase	NA|302aa|up_5|NZ_CP015588.1_6149317_6150223_-	TIGR01777, Hypothetical_UPF0105_protein_Rv2216/MT2273/Mb2239	NA|163aa|up_4|NZ_CP015588.1_6150384_6150873_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|371aa|up_3|NZ_CP015588.1_6150981_6152094_+	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE)	NA|174aa|up_2|NZ_CP015588.1_6152149_6152671_-	pfam14024, DUF4240, Protein of unknown function (DUF4240)	NA|308aa|up_1|NZ_CP015588.1_6152805_6153729_+	PRK08303, PRK08303, short chain dehydrogenase; Provisional	WYL|326aa|up_0|NZ_CP015588.1_6153782_6154760_-	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|902aa|down_0|NZ_CP015588.1_6155473_6158179_-	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed	NA|208aa|down_1|NZ_CP015588.1_6158483_6159107_-	COG1802, GntR, Transcriptional regulators [Transcription]	NA|605aa|down_2|NZ_CP015588.1_6159246_6161061_-	PRK11855, PRK11855, dihydrolipoamide acetyltransferase; Reviewed	NA|463aa|down_3|NZ_CP015588.1_6161170_6162559_-	PRK06416, PRK06416, dihydrolipoamide dehydrogenase; Reviewed	NA|515aa|down_4|NZ_CP015588.1_6162868_6164413_-	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|261aa|down_5|NZ_CP015588.1_6164558_6165341_-	PRK00235, cobS, cobalamin synthase; Reviewed	NA|261aa|down_6|NZ_CP015588.1_6165428_6166211_+	NA	NA|594aa|down_7|NZ_CP015588.1_6166890_6168672_-	PRK02983, lysS, bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX	NA|383aa|down_8|NZ_CP015588.1_6168768_6169917_-	PRK00105, cobT, nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Reviewed	NA|359aa|down_9|NZ_CP015588.1_6170142_6171219_+	pfam13489, Methyltransf_23, Methyltransferase domain
GCF_001975025.1_ASM197502v1	NZ_CP015588	Streptomyces alfalfae strain ACCC40021 chromosome, complete genome	23	7941039-7941130	23	CRISPRCasFinder	no		csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	Orphan	GAACTCCGGCGGCTCCCCGCCCCC	24	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,casR,DinG,cas4	NA|160aa|up_6|NZ_CP015588.1_7932016_7932496_-,NA|215aa|up_2|NZ_CP015588.1_7938049_7938694_+,NA|209aa|down_2|NZ_CP015588.1_7944118_7944745_-,NA|371aa|down_7|NZ_CP015588.1_7948855_7949968_-,NA|210aa|down_9|NZ_CP015588.1_7951381_7952011_-	NA|282aa|up_9|NZ_CP015588.1_7928198_7929044_-	cd05233, SDR_c, classical (c) SDRs	NA|604aa|up_8|NZ_CP015588.1_7929221_7931033_+	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|262aa|up_7|NZ_CP015588.1_7931209_7931995_+	pfam04672, Methyltransf_19, S-adenosyl methyltransferase	NA|160aa|up_6|NZ_CP015588.1_7932016_7932496_-	NA	NA|385aa|up_5|NZ_CP015588.1_7932674_7933829_+	pfam00756, Esterase, Putative esterase	NA|269aa|up_4|NZ_CP015588.1_7934636_7935443_-	pfam10935, DUF2637, Protein of unknown function (DUF2637)	NA|311aa|up_3|NZ_CP015588.1_7937026_7937959_+	pfam12006, DUF3500, Protein of unknown function (DUF3500)	NA|215aa|up_2|NZ_CP015588.1_7938049_7938694_+	NA	NA|242aa|up_1|NZ_CP015588.1_7939005_7939731_+	pfam13646, HEAT_2, HEAT repeats	NA|335aa|up_0|NZ_CP015588.1_7939734_7940739_+	cd04788, HTH_NolA-AlbR, Helix-Turn-Helix DNA binding domain of the transcription regulators NolA and AlbR	NA|256aa|down_0|NZ_CP015588.1_7941757_7942525_+	smart00835, Cupin_1, Cupin	NA|453aa|down_1|NZ_CP015588.1_7942558_7943917_-	PRK09414, PRK09414, NADP-specific glutamate dehydrogenase	NA|209aa|down_2|NZ_CP015588.1_7944118_7944745_-	NA	NA|248aa|down_3|NZ_CP015588.1_7944900_7945644_-	cd10225, MreB_like, MreB and similar proteins	NA|121aa|down_4|NZ_CP015588.1_7945730_7946093_-	NF033459, DksA_like, RNA polymerase-binding protein DksA	NA|110aa|down_5|NZ_CP015588.1_7946148_7946478_-	TIGR02890, conserved_hypothetical_protein, regulatory protein, yteA family	NA|237aa|down_6|NZ_CP015588.1_7948075_7948786_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|371aa|down_7|NZ_CP015588.1_7948855_7949968_-	NA	NA|381aa|down_8|NZ_CP015588.1_7950058_7951201_-	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism]	NA|210aa|down_9|NZ_CP015588.1_7951381_7952011_-	NA
