assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001975125.1_ASM197512v1	NZ_CP017051	Burkholderia pseudomallei strain MSHR4083 chromosome 2, complete sequence	1	28346-28510	1	PILER-CR	no		cas3,csa3,DinG	Orphan	GCGAGCGCGGCGAGCGCGGCCGCG	24	0	0	NA	NA	NA	2	2	Orphan	DEDDh,WYL,cas3,csa3,DinG	NA|76aa|up_4|NZ_CP017051.1_22060_22288_+,NA|143aa|down_2|NZ_CP017051.1_32084_32513_-,NA|84aa|down_4|NZ_CP017051.1_33701_33953_-,NA|83aa|down_7|NZ_CP017051.1_37539_37788_-	NA|338aa|up_9|NZ_CP017051.1_17391_18405_-	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|174aa|up_8|NZ_CP017051.1_19278_19800_+	PRK12511, PRK12511, RNA polymerase sigma factor; Provisional	NA|275aa|up_7|NZ_CP017051.1_19796_20621_+	COG5662, COG5662, Predicted transmembrane transcriptional regulator (anti-sigma factor) [Transcription]	NA|329aa|up_6|NZ_CP017051.1_20678_21665_+	pfam04264, YceI, YceI-like domain	NA|120aa|up_5|NZ_CP017051.1_21704_22064_+	COG4315, COG4315, Uncharacterized protein conserved in bacteria [Function unknown]	NA|76aa|up_4|NZ_CP017051.1_22060_22288_+	NA	NA|170aa|up_3|NZ_CP017051.1_22561_23071_+	PRK12528, PRK12528, RNA polymerase sigma factor; Provisional	NA|335aa|up_2|NZ_CP017051.1_23067_24072_+	PRK09774, PRK09774, fec operon regulator FecR; Reviewed	NA|891aa|up_1|NZ_CP017051.1_24198_26871_+	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor	NA|327aa|up_0|NZ_CP017051.1_27089_28070_-	cd06579, TM_PBP1_transp_AraH_like, Transmembrane subunit (TM) of Escherichia coli AraH and related proteins	NA|602aa|down_0|NZ_CP017051.1_29144_30950_-	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|337aa|down_1|NZ_CP017051.1_30946_31957_-	cd06305, PBP1_methylthioribose_binding-like, similar to methylthioribose-binding protein of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein (PBP1) superfamily	NA|143aa|down_2|NZ_CP017051.1_32084_32513_-	NA	NA|231aa|down_3|NZ_CP017051.1_32675_33368_+	COG2020, STE14, Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones]	NA|84aa|down_4|NZ_CP017051.1_33701_33953_-	NA	NA|420aa|down_5|NZ_CP017051.1_34115_35375_-	cd01163, DszC, Dibenzothiophene (DBT) desulfurization enzyme C	NA|488aa|down_6|NZ_CP017051.1_35594_37058_-	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|83aa|down_7|NZ_CP017051.1_37539_37788_-	NA	NA|91aa|down_8|NZ_CP017051.1_38442_38715_+	pfam13663, DUF4148, Domain of unknown function (DUF4148)	NA|465aa|down_9|NZ_CP017051.1_38818_40213_-	TIGR01386, Probable_sensor_protein_PcoS, heavy metal sensor kinase
GCF_001975125.1_ASM197512v1	NZ_CP017051	Burkholderia pseudomallei strain MSHR4083 chromosome 2, complete sequence	2	1615862-1616024	1	CRISPRCasFinder	no	csa3	cas3,csa3,DinG	Type I-A	CACGACAGCACGACAGCACGACAGCAC	27	1	2	1615977-1615997|1615977-1615997	NZ_CP017051.1_1616009-1616029|NZ_CP017051.1_1616017-1616037	NA	2	2	Orphan	DEDDh,WYL,cas3,csa3,DinG	NA|133aa|up_1|NZ_CP017051.1_1613507_1613906_-,NA|184aa|down_5|NZ_CP017051.1_1622712_1623264_+,NA|60aa|down_8|NZ_CP017051.1_1628157_1628337_-	NA|235aa|up_9|NZ_CP017051.1_1603708_1604413_-	cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR	NA|305aa|up_8|NZ_CP017051.1_1604594_1605509_+	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|446aa|up_7|NZ_CP017051.1_1605759_1607097_-	PRK02991, PRK02991, D-serine dehydratase; Provisional	NA|314aa|up_6|NZ_CP017051.1_1607193_1608135_+	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	csa3|225aa|up_5|NZ_CP017051.1_1609114_1609789_-	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|247aa|up_4|NZ_CP017051.1_1609861_1610602_+	cd07724, POD-like_MBL-fold, ETHE1 (PDO type I), persulfide dioxygenase A (PDOA, PDO type II) and related proteins; MBL-fold metallo-hydrolase domain	NA|414aa|up_3|NZ_CP017051.1_1610606_1611848_+	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|374aa|up_2|NZ_CP017051.1_1611894_1613016_+	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]	NA|133aa|up_1|NZ_CP017051.1_1613507_1613906_-	NA	NA|445aa|up_0|NZ_CP017051.1_1614358_1615693_+	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily	NA|308aa|down_0|NZ_CP017051.1_1616325_1617249_+	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|381aa|down_1|NZ_CP017051.1_1617313_1618456_+	pfam01070, FMN_dh, FMN-dependent dehydrogenase	NA|283aa|down_2|NZ_CP017051.1_1618613_1619462_-	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|275aa|down_3|NZ_CP017051.1_1620000_1620825_+	COG1414, IclR, Transcriptional regulator [Transcription]	NA|468aa|down_4|NZ_CP017051.1_1621123_1622527_+	PRK07488, PRK07488, indoleacetamide hydrolase	NA|184aa|down_5|NZ_CP017051.1_1622712_1623264_+	NA	NA|788aa|down_6|NZ_CP017051.1_1623859_1626223_-	TIGR02717, Uncharacterized_protein_MJ0590, acetyl coenzyme A synthetase (ADP forming), alpha domain	NA|97aa|down_7|NZ_CP017051.1_1627764_1628055_-	pfam00816, Histone_HNS, H-NS histone family	NA|60aa|down_8|NZ_CP017051.1_1628157_1628337_-	NA	NA|167aa|down_9|NZ_CP017051.1_1628512_1629013_-	pfam04972, BON, BON domain
GCF_001975125.1_ASM197512v1	NZ_CP017051	Burkholderia pseudomallei strain MSHR4083 chromosome 2, complete sequence	3	1809862-1809947	2	CRISPRCasFinder	no		cas3,csa3,DinG	Orphan	CGGAATGCCCGATCATCGGGATGC	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,cas3,csa3,DinG	NA|197aa|up_3|NZ_CP017051.1_1803556_1804147_+,NA|110aa|down_5|NZ_CP017051.1_1819272_1819602_-	NA|481aa|up_9|NZ_CP017051.1_1795437_1796880_-	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed	NA|348aa|up_8|NZ_CP017051.1_1796881_1797925_-	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	NA|411aa|up_7|NZ_CP017051.1_1797930_1799163_-	COG1071, AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion]	NA|147aa|up_6|NZ_CP017051.1_1800416_1800857_+	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|372aa|up_5|NZ_CP017051.1_1801191_1802307_-	pfam10604, Polyketide_cyc2, Polyketide cyclase / dehydrase and lipid transport	NA|312aa|up_4|NZ_CP017051.1_1802605_1803541_+	cd08417, PBP2_Nitroaromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators that involved in the catabolism of nitroaromatic/naphthalene compounds and that of related regulators; contains the type 2 periplasmic binding fold	NA|197aa|up_3|NZ_CP017051.1_1803556_1804147_+	NA	NA|553aa|up_2|NZ_CP017051.1_1804412_1806071_+	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]	NA|758aa|up_1|NZ_CP017051.1_1806360_1808634_-	pfam07992, Pyr_redox_2, Pyridine nucleotide-disulphide oxidoreductase	NA|132aa|up_0|NZ_CP017051.1_1808766_1809162_-	COG1734, DksA, DnaK suppressor protein [Signal transduction mechanisms]	NA|422aa|down_0|NZ_CP017051.1_1810522_1811788_+	TIGR01849, unnamed_protein_product, polyhydroxyalkanoate depolymerase, intracellular	NA|614aa|down_1|NZ_CP017051.1_1812003_1813845_+	PRK06948, PRK06948, ribonucleotide reductase-like protein; Provisional	NA|604aa|down_2|NZ_CP017051.1_1813919_1815731_+	COG2187, COG2187, Uncharacterized protein conserved in bacteria [Function unknown]	NA|344aa|down_3|NZ_CP017051.1_1816283_1817315_+	PRK07877, PRK07877, Rv1355c family protein	NA|611aa|down_4|NZ_CP017051.1_1817311_1819144_+	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]	NA|110aa|down_5|NZ_CP017051.1_1819272_1819602_-	NA	NA|150aa|down_6|NZ_CP017051.1_1819605_1820055_-	cd17775, CBS_pair_bact_arch, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains  present in bacteria and archaea	NA|218aa|down_7|NZ_CP017051.1_1820508_1821162_+	cd02142, McbC_SagB-like_oxidoreductase, oxidase similar to the microcin B17 processing protein McbC	NA|145aa|down_8|NZ_CP017051.1_1821229_1821664_-	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]	NA|380aa|down_9|NZ_CP017051.1_1822070_1823210_-	cd00342, gram_neg_porins, Porins form aqueous channels for the diffusion of small hydrophillic molecules across the outer membrane
GCF_001975125.1_ASM197512v1	NZ_CP017050	Burkholderia pseudomallei strain MSHR4083 chromosome 1, complete sequence	1	209028-209169	1	CRISPRCasFinder	no		DEDDh,WYL,cas3,csa3,DinG	Orphan	CGCCGGCGTTCGCCGCATACGCGGCAGACGCCGTTCCTGCGCGA	44	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,cas3,csa3,DinG	NA|71aa|up_8|NZ_CP017050.1_200441_200654_-,NA|75aa|up_1|NZ_CP017050.1_207353_207578_+,NA|64aa|down_7|NZ_CP017050.1_224850_225042_+,NA|60aa|down_9|NZ_CP017050.1_226564_226744_-	NA|312aa|up_9|NZ_CP017050.1_199502_200438_-	PRK11272, PRK11272, putative DMT superfamily transporter inner membrane protein; Provisional	NA|71aa|up_8|NZ_CP017050.1_200441_200654_-	NA	NA|264aa|up_7|NZ_CP017050.1_200877_201669_-	cd02108, bact_SO_family_Moco, bacterial subgroup of the sulfite oxidase (SO) family of molybdopterin binding domains	NA|375aa|up_6|NZ_CP017050.1_201684_202809_-	COG4117, COG4117, Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) [Energy production and conversion]	NA|275aa|up_5|NZ_CP017050.1_202799_203624_-	pfam06764, DUF1223, Protein of unknown function (DUF1223)	NA|102aa|up_4|NZ_CP017050.1_203784_204090_-	TIGR02953, conserved_hypothetical_protein, pentapeptide MXKDX repeat protein	NA|644aa|up_3|NZ_CP017050.1_204734_206666_+	PRK09284, PRK09284, thiamine biosynthesis protein ThiC; Provisional	NA|71aa|up_2|NZ_CP017050.1_206889_207102_+	PRK10540, PRK10540, osmotically-inducible lipoprotein OsmB	NA|75aa|up_1|NZ_CP017050.1_207353_207578_+	NA	NA|311aa|up_0|NZ_CP017050.1_207848_208781_+	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|428aa|down_0|NZ_CP017050.1_209845_211129_+	cd01948, EAL, EAL domain	NA|135aa|down_1|NZ_CP017050.1_211530_211935_-	PRK09256, PRK09256, aminoacyl-tRNA hydrolase	NA|899aa|down_2|NZ_CP017050.1_211931_214628_-	PRK10875, recD, exodeoxyribonuclease V subunit alpha	NA|1271aa|down_3|NZ_CP017050.1_214624_218437_-	PRK10876, recB, exonuclease V subunit beta; Provisional	NA|1115aa|down_4|NZ_CP017050.1_218433_221778_-	pfam04257, Exonuc_V_gamma, Exodeoxyribonuclease V, gamma subunit	NA|177aa|down_5|NZ_CP017050.1_221990_222521_+	pfam05109, Herpes_BLLF1, Herpes virus major outer envelope glycoprotein (BLLF1)	NA|759aa|down_6|NZ_CP017050.1_222577_224854_+	pfam12805, FUSC-like, FUSC-like inner membrane protein yccS	NA|64aa|down_7|NZ_CP017050.1_224850_225042_+	NA	NA|455aa|down_8|NZ_CP017050.1_225038_226403_+	PRK10580, proY, putative proline-specific permease; Provisional	NA|60aa|down_9|NZ_CP017050.1_226564_226744_-	NA
GCF_001975125.1_ASM197512v1	NZ_CP017050	Burkholderia pseudomallei strain MSHR4083 chromosome 1, complete sequence	2	1494100-1494179	2	CRISPRCasFinder	no		DEDDh,WYL,cas3,csa3,DinG	Orphan	ACGGAATGGGCCCCGGCATGATG	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,cas3,csa3,DinG	NA|95aa|up_6|NZ_CP017050.1_1487184_1487469_+,NA|124aa|up_4|NZ_CP017050.1_1488965_1489337_-,NA|183aa|down_0|NZ_CP017050.1_1495132_1495681_+,NA|116aa|down_7|NZ_CP017050.1_1502950_1503298_-	NA|135aa|up_9|NZ_CP017050.1_1483886_1484291_-	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria	NA|335aa|up_8|NZ_CP017050.1_1485164_1486169_+	pfam08065, K167R, K167R (NUC007) repeat	NA|161aa|up_7|NZ_CP017050.1_1486705_1487188_+	pfam10908, DUF2778, Protein of unknown function (DUF2778)	NA|95aa|up_6|NZ_CP017050.1_1487184_1487469_+	NA	NA|364aa|up_5|NZ_CP017050.1_1487541_1488633_-	PHA02536, Q, portal vertex protein; Provisional	NA|124aa|up_4|NZ_CP017050.1_1488965_1489337_-	NA	NA|292aa|up_3|NZ_CP017050.1_1489631_1490507_-	TIGR03381, putative_carbon-nitrogen_hydrolase, N-carbamoylputrescine amidase	NA|371aa|up_2|NZ_CP017050.1_1490517_1491630_-	cd09996, HDAC_classII_1, Histone deacetylases and histone-like deacetylases, classII	NA|365aa|up_1|NZ_CP017050.1_1491658_1492753_-	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|323aa|up_0|NZ_CP017050.1_1492895_1493864_+	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|183aa|down_0|NZ_CP017050.1_1495132_1495681_+	NA	NA|483aa|down_1|NZ_CP017050.1_1495943_1497392_+	TIGR02393, RNA_polymerase_sigma_factor_RpoD, RNA polymerase sigma factor RpoD, C-terminal domain	NA|538aa|down_2|NZ_CP017050.1_1497410_1499024_-	PRK02107, PRK02107, glutamate--cysteine ligase; Provisional	NA|314aa|down_3|NZ_CP017050.1_1499182_1500124_-	COG0122, AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair]	NA|365aa|down_4|NZ_CP017050.1_1500120_1501215_-	PRK15435, PRK15435, bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada	NA|139aa|down_5|NZ_CP017050.1_1501616_1502033_+	cd07253, GLOD5, Human glyoxalase domain-containing protein 5 and similar proteins	NA|185aa|down_6|NZ_CP017050.1_1502180_1502735_-	pfam07152, YaeQ, YaeQ protein	NA|116aa|down_7|NZ_CP017050.1_1502950_1503298_-	NA	NA|187aa|down_8|NZ_CP017050.1_1503783_1504344_-	PRK15130, PRK15130, spermidine N1-acetyltransferase; Provisional	NA|52aa|down_9|NZ_CP017050.1_1505019_1505175_-	PLN00162, PLN00162, transport protein sec23; Provisional
