assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001975625.1_ASM197562v1	NZ_CP019417	Salmonella enterica subsp. enterica serovar Wandsworth str. SA20092095 chromosome, complete genome	1	3019100-3020348	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DEDDh,WYL,DinG,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	20,20,19	20	TypeI-E	DEDDh,WYL,DinG,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	NA,NA	NA|254aa|up_9|NZ_CP019417.1_3010966_3011728_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|NZ_CP019417.1_3011708_3012758_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|NZ_CP019417.1_3012754_3013234_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|NZ_CP019417.1_3013233_3013944_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|NZ_CP019417.1_3013962_3014274_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|NZ_CP019417.1_3014464_3014788_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|NZ_CP019417.1_3014838_3015444_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|480aa|up_2|NZ_CP019417.1_3015430_3016870_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|NZ_CP019417.1_3016879_3017788_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|349aa|up_0|NZ_CP019417.1_3018038_3019085_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	cas2|98aa|down_0|NZ_CP019417.1_3020444_3020738_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|307aa|down_1|NZ_CP019417.1_3020737_3021658_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|217aa|down_2|NZ_CP019417.1_3021654_3022305_-	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas5|249aa|down_3|NZ_CP019417.1_3022286_3023033_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|353aa|down_4|NZ_CP019417.1_3023043_3024102_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|184aa|down_5|NZ_CP019417.1_3024124_3024676_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|519aa|down_6|NZ_CP019417.1_3024672_3026229_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|888aa|down_7|NZ_CP019417.1_3026240_3028904_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|318aa|down_8|NZ_CP019417.1_3029347_3030301_+	PRK15379, PRK15379, type III secretion system effector SopD	NA|245aa|down_9|NZ_CP019417.1_3030513_3031248_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase
GCF_001975625.1_ASM197562v1	NZ_CP019417	Salmonella enterica subsp. enterica serovar Wandsworth str. SA20092095 chromosome, complete genome	2	3036644-3038136	2,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DEDDh,WYL,DinG,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	24,24,23	24	TypeI-E	DEDDh,WYL,DinG,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	NA,NA	cas7|353aa|up_9|NZ_CP019417.1_3023043_3024102_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|184aa|up_8|NZ_CP019417.1_3024124_3024676_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|519aa|up_7|NZ_CP019417.1_3024672_3026229_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|888aa|up_6|NZ_CP019417.1_3026240_3028904_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|318aa|up_5|NZ_CP019417.1_3029347_3030301_+	PRK15379, PRK15379, type III secretion system effector SopD	NA|245aa|up_4|NZ_CP019417.1_3030513_3031248_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|571aa|up_3|NZ_CP019417.1_3031349_3033062_-	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|600aa|up_2|NZ_CP019417.1_3033061_3034861_-	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|121aa|up_1|NZ_CP019417.1_3035296_3035659_+	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|266aa|up_0|NZ_CP019417.1_3035748_3036546_-	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only]	NA|224aa|down_0|NZ_CP019417.1_3038432_3039104_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|433aa|down_1|NZ_CP019417.1_3039239_3040538_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_2|NZ_CP019417.1_3040620_3042258_-	PRK05380, pyrG, CTP synthetase; Validated	NA|267aa|down_3|NZ_CP019417.1_3042485_3043286_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|99aa|down_4|NZ_CP019417.1_3044052_3044349_-	COG3668, ParE, Plasmid stabilization system protein [General function prediction only]	NA|119aa|down_5|NZ_CP019417.1_3044314_3044671_-	COG3609, COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain [Transcription]	NA|745aa|down_6|NZ_CP019417.1_3044754_3046989_-	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|432aa|down_7|NZ_CP019417.1_3047040_3048336_-	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|919aa|down_8|NZ_CP019417.1_3048393_3051150_+	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional	NA|381aa|down_9|NZ_CP019417.1_3051193_3052336_-	COG1929, COG1929, Glycerate kinase [Carbohydrate transport and metabolism]
GCF_001975625.1_ASM197562v1	NZ_CP019417	Salmonella enterica subsp. enterica serovar Wandsworth str. SA20092095 chromosome, complete genome	3	4565182-4565276	3	CRISPRCasFinder	no		DEDDh,WYL,DinG,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	Orphan	TGCGGGGCGCAGCAAGTACAAAAAA	25	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,DinG,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	NA|77aa|up_1|NZ_CP019417.1_4563596_4563827_+,NA|68aa|down_3|NZ_CP019417.1_4569417_4569621_+	NA|394aa|up_9|NZ_CP019417.1_4554109_4555291_-	PHA03095, PHA03095, ankyrin-like protein; Provisional	NA|431aa|up_8|NZ_CP019417.1_4556343_4557636_-	PRK09692, PRK09692, integrase; Provisional	NA|305aa|up_7|NZ_CP019417.1_4557942_4558857_+	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|456aa|up_6|NZ_CP019417.1_4558853_4560221_+	TIGR00665, DnaB, replicative DNA helicase	NA|572aa|up_5|NZ_CP019417.1_4560217_4561933_+	TIGR03764, ICE_PFGI_1_parB, integrating conjugative element, PFGI_1 class, ParB family protein	NA|85aa|up_4|NZ_CP019417.1_4561925_4562180_+	PRK13715, PRK13715, conjugal transfer protein TraR; Provisional	NA|248aa|up_3|NZ_CP019417.1_4562172_4562916_+	pfam10979, DUF2786, Protein of unknown function (DUF2786)	NA|199aa|up_2|NZ_CP019417.1_4563000_4563597_+	pfam11198, DUF2857, Protein of unknown function (DUF2857)	NA|77aa|up_1|NZ_CP019417.1_4563596_4563827_+	NA	NA|411aa|up_0|NZ_CP019417.1_4563905_4565138_+	pfam13730, HTH_36, Helix-turn-helix domain	NA|241aa|down_0|NZ_CP019417.1_4565479_4566202_+	TIGR03761, ICE_PFL4669, integrating conjugative element protein, PFL_4669 family	NA|670aa|down_1|NZ_CP019417.1_4566215_4568225_+	PRK07726, PRK07726, DNA topoisomerase 3	NA|164aa|down_2|NZ_CP019417.1_4568853_4569345_+	pfam12101, DUF3577, Protein of unknown function (DUF3577)	NA|68aa|down_3|NZ_CP019417.1_4569417_4569621_+	NA	NA|184aa|down_4|NZ_CP019417.1_4569638_4570190_+	PRK09010, PRK09010, single-stranded DNA-binding protein; Provisional	NA|81aa|down_5|NZ_CP019417.1_4570268_4570511_+	pfam13711, DUF4160, Domain of unknown function (DUF4160)	NA|83aa|down_6|NZ_CP019417.1_4570494_4570743_+	pfam10387, DUF2442, Protein of unknown function (DUF2442)	NA|450aa|down_7|NZ_CP019417.1_4571009_4572359_+	TIGR03748, conj_PilL, conjugative transfer region protein, TIGR03748 family	NA|148aa|down_8|NZ_CP019417.1_4572360_4572804_+	pfam07419, PilM, PilM	NA|558aa|down_9|NZ_CP019417.1_4572823_4574497_+	TIGR02520, putative_Type_IV_pilus_protein, type IVB pilus formation outer membrane protein, R64 PilN family
