The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP011179	Bordetella pertussis strain F670 chromosome, complete genome	4103215	27282	70036	4103215	tRNA,transposase	Synechococcus_phage(50.0%)	41	NA	NA
WP_010930363.1|27282_28233_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995007.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929578.1|28674_29109_-	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_019247164.1|29141_30359_-	thiolase family protein	NA	NA	NA	NA	NA
WP_077068998.1|30364_30862_-	dehydratase	NA	NA	NA	NA	NA
WP_019247165.1|31069_32005_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929582.1|32214_33006_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929583.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010929584.1|34625_35576_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814398.1|35572_36763_-	MFS transporter	NA	NA	NA	NA	NA
WP_010929585.1|37012_37924_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010929586.1|37925_40064_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003814404.1|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|41318_42212_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247766.1|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|42687_43218_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_010929588.1|43663_44614_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929589.1|45200_45749_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|45720_45957_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|46084_46978_+	AEC family transporter	NA	NA	NA	NA	NA
WP_010929590.1|48147_49395_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|49391_50006_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_010929591.1|50141_51092_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443813.1|51134_52391_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|53622_54357_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|54362_54953_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|54977_55667_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|55663_56425_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|56504_57404_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929584.1|57497_58448_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929595.1|59248_60475_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_047122776.1|60474_60888_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929597.1|61077_62019_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248755.1|62442_63417_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929599.1|63473_64055_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010929600.1|64067_64370_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_029443770.1|64488_65547_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_019247832.1|65581_66853_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010929603.1|67482_68664_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929584.1|69085_70036_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP011179	Bordetella pertussis strain F670 chromosome, complete genome	4103215	77634	136108	4103215	tRNA,transposase	Planktothrix_phage(22.22%)	54	NA	NA
WP_005012067.1|77634_78585_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166334.1|78659_79604_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929608.1|79600_81475_-	O-antigen biosynthesis protein WlbL	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
WP_003807102.1|82822_83527_-	O-antigen biosynthesis protein WlbI	NA	NA	NA	NA	NA
WP_010929609.1|83523_84696_-	O-antigen biosynthesis protein WlbH	NA	NA	NA	NA	NA
WP_010929610.1|84891_85485_-	O-antigen biosynthesis protein WlbG	NA	NA	NA	NA	NA
WP_010929611.1|85481_86714_-	O-antigen biosynthesis protein WlbF	NA	NA	NA	NA	NA
WP_010929612.1|86731_87991_-	O-antigen biosynthesis protein WlbE	NA	NA	NA	NA	NA
WP_010929613.1|88014_89103_-	O-antigen biosynthesis protein WlbD	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
WP_010929614.1|89110_90211_-	O-antigen biosynthesis protein WlbC	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
WP_003807114.1|90214_90790_-	O-antigen biosynthesis protein WlbB	NA	NA	NA	NA	NA
WP_003807115.1|90793_91846_-	O-antigen biosynthesis protein WlbA	NA	NA	NA	NA	NA
WP_010929615.1|91976_92984_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
WP_010929616.1|92985_94272_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
WP_003807124.1|94288_94444_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929617.1|94468_95272_-	type III pantothenate kinase	NA	NA	NA	NA	NA
WP_010929618.1|95268_96135_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_010929619.1|96209_97340_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003807131.1|97339_98179_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
WP_010929620.1|99111_99714_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_010929621.1|99743_100397_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003807138.1|100529_101786_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
WP_010929622.1|101833_102733_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_003818417.1|102808_103084_+	YbeD family protein	NA	NA	NA	NA	NA
WP_010929623.1|103091_103754_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
WP_003807146.1|103815_104817_+	lipoyl synthase	NA	NA	NA	NA	NA
WP_003807148.1|104831_105380_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
WP_010929624.1|105437_106334_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_010929625.1|106330_107392_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
WP_010929626.1|107427_108378_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929627.1|109277_110471_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_010929628.1|110552_111182_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_010927242.1|111243_111927_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_023853376.1|111936_113619_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003815933.1|113906_114254_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
WP_003815930.1|114344_114662_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|114944_115961_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815929.1|116036_116837_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003815927.1|116833_117709_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010929633.1|117719_119012_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929634.1|119054_120095_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
WP_010929635.1|120200_121022_-	phosphodiesterase	NA	NA	NA	NA	NA
WP_005012067.1|121122_122073_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905488.1|122171_123077_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.7	9.8e-21
WP_003815918.1|123073_123907_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010929637.1|124743_125754_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_019247800.1|125750_126140_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010929638.1|127033_128287_+	amidase	NA	NA	NA	NA	NA
WP_010929639.1|128377_130078_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_010929640.1|130504_131152_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853393.1|131150_132590_+	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_003815905.1|132682_132985_+	bacterioferritin-associated ferredoxin	NA	NA	NA	NA	NA
WP_010929512.1|133012_133891_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|135157_136108_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP011179	Bordetella pertussis strain F670 chromosome, complete genome	4103215	164893	225404	4103215	protease,tRNA,transposase	Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)	51	NA	NA
WP_005015810.1|164893_165844_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929659.1|167287_168190_-	YgcG family protein	NA	NA	NA	NA	NA
WP_003815889.1|168167_168797_-	LemA family protein	NA	NA	NA	NA	NA
WP_010929660.1|169079_170510_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.8	5.8e-44
WP_010929661.1|170543_171173_+	LysE family transporter	NA	NA	NA	NA	NA
WP_003815895.1|171221_172829_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
WP_010929663.1|172853_173537_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815898.1|173618_174095_-	bacterioferritin	NA	NA	NA	NA	NA
WP_010929591.1|174301_175252_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929664.1|176367_176895_+	META domain-containing protein	NA	NA	NA	NA	NA
WP_010929665.1|176986_177802_+	META and DUF4377 domain-containing protein	NA	NA	NA	NA	NA
WP_003808370.1|177862_178597_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_010929666.1|178634_180713_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
WP_003808374.1|180962_181235_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446322.1|181336_182422_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010929668.1|182425_184330_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA	NA
WP_014486044.1|184326_188001_+	translocation/assembly module TamB domain-containing protein	NA	NA	NA	NA	NA
WP_010929670.1|188061_188625_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
WP_003808385.1|188632_189055_-	VOC family protein	NA	NA	NA	NA	NA
WP_010929671.1|189082_189502_-	VOC family protein	NA	NA	NA	NA	NA
WP_076879599.1|189530_190004_-	GNAT family N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	31.1	2.2e-11
WP_003808391.1|190103_190601_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003808393.1|190755_193026_+	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA	NA
WP_010929672.1|193074_194307_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010929591.1|194405_195356_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929673.1|195458_196094_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.8e-83
WP_019248671.1|196090_196984_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_010929675.1|197378_198479_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_010929676.1|198560_198935_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_010929677.1|198994_201859_+	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
WP_010929678.1|202003_202744_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929679.1|202813_204025_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929680.1|204053_205022_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931070.1|205635_206586_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929699.1|206742_207066_+	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
WP_023853200.1|207170_208211_-	cyclase family protein	NA	NA	NA	NA	NA
WP_010929697.1|208216_208996_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
WP_003807672.1|209041_209338_-	YciI family protein	NA	NA	NA	NA	NA
WP_003807674.1|209363_209639_-	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
WP_003819086.1|209695_210340_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010929696.1|210339_211026_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010929695.1|211155_212007_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929694.1|212057_212783_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929693.1|212814_214164_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929692.1|214275_215208_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_033446404.1|215665_218461_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
WP_010929690.1|219054_221997_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_010929689.1|222068_222788_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_010929688.1|222826_223375_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929687.1|223529_224429_+	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_005012808.1|224453_225404_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP011179	Bordetella pertussis strain F670 chromosome, complete genome	4103215	233336	286924	4103215	protease,tRNA,transposase	Bacillus_phage(25.0%)	48	NA	NA
WP_005012067.1|233336_234287_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|234373_235324_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930742.1|235320_236271_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929700.1|236369_237167_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003814363.1|238116_238527_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_003814358.1|239548_240292_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814356.1|240335_241379_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814355.1|241549_243652_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_003814351.1|245062_246019_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929701.1|246037_246529_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_010929702.1|246525_247881_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
WP_010929703.1|247881_248580_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_010929704.1|248576_249278_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_003814339.1|249530_250580_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
WP_003814337.1|250685_251627_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_010929705.1|251623_253513_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
WP_003814332.1|253599_254238_+	VTT domain-containing protein	NA	NA	NA	NA	NA
WP_019247543.1|254380_255766_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
WP_010929706.1|255696_256233_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_010929707.1|256384_257776_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_010929708.1|257792_258773_-	AEC family transporter	NA	NA	NA	NA	NA
WP_003814324.1|258908_259892_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
WP_010929709.1|259956_260856_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814321.1|260962_262717_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_010929710.1|262724_263849_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929711.1|263862_264843_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|265573_266524_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929712.1|267083_267629_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929713.1|267712_269332_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004567834.1|269347_270502_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_003817696.1|270515_270641_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_010929714.1|270637_272389_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
WP_010929715.1|272385_274065_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
WP_010929716.1|274127_274676_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.3e-28
WP_010929717.1|275818_276097_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|277140_278091_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_173651708.1|278108_278255_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929718.1|278368_278530_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_010929719.1|278537_278678_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815821.1|279196_279646_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
WP_003815819.1|279655_280267_-	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_019247426.1|280425_281280_-	cytochrome c1	NA	NA	NA	NA	NA
WP_003815816.1|281299_282682_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_003815815.1|282746_283388_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_010929721.1|283527_283986_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_010927226.1|284010_284787_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_014906092.1|284840_285977_+	trypsin-like peptidase domain-containing protein	NA	W5SAB9	Pithovirus	31.2	1.2e-07
WP_005015810.1|285973_286924_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP011179	Bordetella pertussis strain F670 chromosome, complete genome	4103215	468501	585347	4103215	tRNA,transposase	Acinetobacter_phage(22.22%)	101	NA	NA
WP_010929956.1|468501_469452_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929957.1|470174_471449_+|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
WP_003807618.1|471535_472618_+	peptide chain release factor 1	NA	A0A0S4KWG0	Pseudomonas_phage	40.7	3.3e-07
WP_010929958.1|472628_473441_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_010929959.1|473477_473804_+	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA	NA
WP_003807624.1|473808_474369_+	UbiX family flavin prenyltransferase	NA	NA	NA	NA	NA
WP_003819054.1|474609_475602_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929960.1|475620_476616_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_023853194.1|476631_478008_+	FAD binding domain-containing protein	NA	A0A0P0IVM8	Acinetobacter_phage	37.3	2.4e-18
WP_010929962.1|478000_480382_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_019247263.1|480398_480788_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_020699695.1|480914_481145_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|481249_482200_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929963.1|482298_483249_-	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
WP_003815183.1|483245_484118_-	RNase adapter RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
WP_010929964.1|485048_486335_+	cytochrome c	NA	NA	NA	NA	NA
WP_010929965.1|486388_487315_-	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_010929966.1|487333_487789_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_003815177.1|488640_489432_-	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
WP_003815175.1|489463_490084_-	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_010929967.1|490080_490710_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_003815172.1|490722_491331_-	HAD-IIIA family hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
WP_003815171.1|491327_492317_-	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
WP_010929968.1|492422_493637_+	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_010929969.1|495588_496539_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929970.1|497972_499259_+	putative Na+/H+ antiporter	NA	NA	NA	NA	NA
WP_010929971.1|499424_499733_+	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
WP_003807035.1|499733_500399_+	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	6.7e-11
WP_003807038.1|500439_502230_+|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
WP_010929972.1|502342_503203_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_010929973.1|503199_504405_+	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010929974.1|504401_505286_-	DMT family transporter	NA	NA	NA	NA	NA
WP_033446233.1|506802_507237_-	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
WP_014905478.1|507199_508198_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931408.1|508309_509455_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931407.1|509529_510858_+	amidase	NA	NA	NA	NA	NA
WP_003815296.1|510891_511482_-	cysteine dioxygenase	NA	NA	NA	NA	NA
WP_010931406.1|511771_512566_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019249391.1|513735_514470_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931404.1|514476_515343_-	copper resistance protein B	NA	NA	NA	NA	NA
WP_010931403.1|515350_517126_-	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
WP_029443756.1|517168_517666_-	cupredoxin family protein	NA	NA	NA	NA	NA
WP_005013747.1|517962_518913_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486105.1|519011_519962_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931400.1|520302_521253_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931399.1|523576_524725_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003817794.1|524769_525432_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931397.1|525545_526538_+	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_003815313.1|526534_527272_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003815315.1|527351_528173_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931396.1|528261_529125_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_003815317.1|529251_529488_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931395.1|531462_532497_+	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA	NA
WP_003817805.1|532555_533533_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931394.1|533540_534461_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_023852622.1|534457_536158_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	1.0e-15
WP_010931393.1|536160_537066_+	hydrolase	NA	NA	NA	NA	NA
WP_010931392.1|537109_538243_+	M20 family metallopeptidase	NA	NA	NA	NA	NA
WP_005012808.1|538371_539322_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931391.1|539420_541490_-	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	37.3	2.6e-101
WP_019247688.1|541532_543635_-	primosomal protein N'	NA	NA	NA	NA	NA
WP_010931389.1|543941_545018_-	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
WP_010931388.1|545093_545978_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003815341.1|546160_546583_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA	NA
WP_010931387.1|546592_547993_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA	NA
WP_003817813.1|548035_548941_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA	NA
WP_010931386.1|549039_550581_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA	NA
WP_003815348.1|550615_551155_-	F0F1 ATP synthase subunit delta	NA	NA	NA	NA	NA
WP_010931385.1|551167_551638_-	F0F1 ATP synthase subunit B	NA	NA	NA	NA	NA
WP_003815363.1|551775_552018_-	F0F1 ATP synthase subunit C	NA	NA	NA	NA	NA
WP_003815364.1|552134_553016_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA	NA
WP_003815365.1|553088_553409_-	ATP synthase subunit I	NA	NA	NA	NA	NA
WP_023852617.1|554260_555211_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003815367.1|556534_557311_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931383.1|557345_559118_+	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931382.1|559119_560022_-	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_003817821.1|560146_560506_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931381.1|560537_561500_+|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_005012067.1|561598_562549_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931380.1|562561_563497_-	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_010931379.1|563556_564396_-	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931378.1|564392_565562_-	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_003815379.1|565558_566848_-	murein transglycosylase A	NA	NA	NA	NA	NA
WP_003815381.1|566890_567265_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003815384.1|567370_568108_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_010931377.1|568115_568820_+	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_010931376.1|569083_570604_+	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_003815390.1|570659_571223_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_003817833.1|571241_572273_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_010931375.1|572269_573058_+	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_019247413.1|573078_573237_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023997720.1|573233_574223_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|575979_576930_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931374.1|578152_579055_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814312.1|579056_579911_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931373.1|579957_581067_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931372.1|581077_581596_-	flavin reductase family protein	NA	NA	NA	NA	NA
WP_003814302.1|581625_582258_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_003814300.1|582329_582989_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_003814298.1|582985_584206_-	MFS transporter	NA	NA	NA	NA	NA
WP_019247745.1|584474_585347_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
>prophage 6
NZ_CP011179	Bordetella pertussis strain F670 chromosome, complete genome	4103215	589761	654643	4103215	tRNA,transposase	Pandoravirus(12.5%)	48	NA	NA
WP_010931363.1|589761_590778_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814287.1|591049_591676_-	aminotransferase class IV	NA	NA	NA	NA	NA
WP_010931367.1|591731_592859_-	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
WP_003814283.1|592864_598582_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
WP_003814277.1|599149_600094_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
WP_003814275.1|600282_601218_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_010931365.1|601335_602907_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247692.1|602986_604195_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_019247693.1|604692_605610_+	DMT family transporter	NA	NA	NA	NA	NA
WP_003814254.1|607970_608192_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_010929632.1|608522_609539_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814252.1|609623_609875_-	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_003814250.1|609878_610694_-	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_010931362.1|610806_611685_-	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003820957.1|611796_613560_-|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
WP_010931361.1|613675_615016_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_010927010.1|616085_617510_-	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_003814239.1|617509_618211_-	response regulator	NA	W8CYM9	Bacillus_phage	36.6	5.6e-32
WP_010930179.1|619715_620666_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994844.1|620761_621733_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931357.1|621737_622418_-	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_003814742.1|622555_622948_+	OsmC family protein	NA	NA	NA	NA	NA
WP_010931561.1|623055_624072_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814739.1|624311_625097_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931356.1|625191_626601_-	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_010927090.1|626611_627412_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931355.1|627432_628203_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_010931354.1|628245_628713_+	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_005013747.1|628709_629660_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|630742_631693_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818344.1|632657_633536_-	fatty acid desaturase	NA	NA	NA	NA	NA
WP_019247959.1|634462_637441_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931070.1|637794_638745_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931353.1|638741_639830_-	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_010931352.1|639865_640729_-	MaoC family dehydratase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010931351.1|641868_642258_-	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_014486103.1|642261_643044_-	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_047122778.1|643077_643863_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931349.1|644138_645278_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931348.1|645274_646066_+	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931347.1|646062_646812_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931346.1|646808_647681_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_004566224.1|647680_648682_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003808195.1|648678_649842_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003808193.1|649867_650551_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247312.1|650504_651839_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931344.1|651831_652926_+	CoA transferase	NA	NA	NA	NA	NA
WP_005012067.1|653692_654643_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
NZ_CP011179	Bordetella pertussis strain F670 chromosome, complete genome	4103215	673554	750863	4103215	protease,tRNA,transposase,integrase	Bacillus_phage(20.0%)	58	720691:720709	740579:740597
WP_023995489.1|673554_674505_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931335.1|674603_676079_-	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931334.1|677666_678554_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931333.1|678556_679498_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931332.1|679543_681109_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931331.1|682886_684212_-	aspartate aminotransferase family protein	NA	NA	NA	NA	NA
WP_010931330.1|684394_685852_+	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	21.1	7.6e-15
WP_003816386.1|685815_686313_-	dihydrofolate reductase	NA	A0A140HLG8	Bacillus_phage	38.9	3.0e-24
WP_010931328.1|686343_687315_-	thymidylate synthase	NA	J7KKN7	Erwinia_phage	33.3	4.8e-50
WP_003808444.1|687367_687805_-	OsmC family protein	NA	NA	NA	NA	NA
WP_010931327.1|687928_688597_+	2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase	NA	NA	NA	NA	NA
WP_003808448.1|689325_690429_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_171024626.1|690531_691809_+	Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB	NA	NA	NA	NA	NA
WP_010930472.1|691820_692846_+	Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC	NA	A0A2K9L4U8	Tupanvirus	44.2	4.7e-72
WP_010931325.1|692847_694218_+	polysaccharide biosynthesis C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010931324.1|694218_695355_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010931323.1|695401_697327_+	asparagine synthase (glutamine-hydrolyzing)	NA	A0A2K9R7N5	Dishui_lake_phycodnavirus	29.0	1.0e-27
WP_010931322.1|697323_698445_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010931321.1|698441_699596_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_010931320.1|699592_700723_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_003808462.1|700730_702296_-	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_010931319.1|702302_703685_-	phosphomannomutase/phosphoglucomutase	NA	A0A127AWJ1	Bacillus_phage	31.6	6.2e-51
WP_003808465.1|703963_704575_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931317.1|704666_706082_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_003818936.1|706099_706810_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_010931316.1|706806_708129_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_010931315.1|708208_710170_+	sulfatase-like hydrolase/transferase	NA	NA	NA	NA	NA
WP_003818932.1|710295_711609_-	fumarylacetoacetase	NA	NA	NA	NA	NA
WP_003818930.1|711717_713016_-	homogentisate 1,2-dioxygenase	NA	NA	NA	NA	NA
WP_010931314.1|713198_714107_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003808487.1|714116_714326_-	DUF2783 domain-containing protein	NA	NA	NA	NA	NA
WP_003808489.1|714337_716017_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931313.1|716118_717072_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010925978.1|717162_717990_-	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	NA	NA	NA	NA
WP_010931312.1|717988_719875_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_003818921.1|719871_720471_+	lipoprotein localization protein LolB	NA	NA	NA	NA	NA
WP_010931311.1|720519_721419_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
720691:720709	attL	CTGCCTGGCGTGGCCGAGT	NA	NA	NA	NA
WP_010931310.1|721627_722578_+	ribose-phosphate pyrophosphokinase	NA	A0A2K9L8D8	Tupanvirus	35.5	7.3e-43
WP_029443719.1|722700_723315_+	50S ribosomal protein L25/general stress protein Ctc	NA	NA	NA	NA	NA
WP_010931308.1|723443_724040_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931307.1|724036_724819_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_010931306.1|724891_725983_+	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_010931305.1|726262_727390_+|integrase	site-specific integrase	integrase	A0A1B0VMI6	Pseudomonas_phage	33.6	1.4e-48
WP_010931304.1|727731_728778_+	Fic family protein	NA	NA	NA	NA	NA
WP_010931303.1|728925_732045_+	DEAD/DEAH box helicase family protein	NA	NA	NA	NA	NA
WP_010931302.1|732046_734998_+	restriction endonuclease subunit M	NA	G8I4P9	Mycobacterium_phage	25.1	2.9e-21
WP_010931301.1|735013_736225_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_005013747.1|736408_737359_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077274087.1|737375_737870_+	DUF4276 family protein	NA	NA	NA	NA	NA
WP_019247740.1|737873_738131_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019248455.1|738674_739586_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_029443992.1|739667_739952_+	ATP-dependent helicase	NA	A0A1V0SIN4	Klosneuvirus	34.1	6.8e-05
WP_005012067.1|740735_741686_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
740579:740597	attR	ACTCGGCCACGCCAGGCAG	NA	NA	NA	NA
WP_019247178.1|742104_744669_-	autotransporter domain-containing protein	NA	NA	NA	NA	NA
WP_019247179.1|744713_746567_-	autotransporter-associated beta strand repeat-containing protein	NA	NA	NA	NA	NA
WP_014905963.1|746899_748471_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_162291319.1|749739_749895_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|749912_750863_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP011179	Bordetella pertussis strain F670 chromosome, complete genome	4103215	1004103	1098140	4103215	transposase	Bacillus_virus(30.0%)	88	NA	NA
WP_005012067.1|1004103_1005054_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486100.1|1005156_1005819_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019249309.1|1005913_1006084_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247599.1|1006436_1007438_+	amidase	NA	NA	NA	NA	NA
WP_003818702.1|1007440_1008637_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486098.1|1008657_1009461_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_019247598.1|1009541_1009838_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247597.1|1009868_1010432_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014486097.1|1010472_1011330_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003818698.1|1011337_1012087_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.5	6.2e-29
WP_014486096.1|1012108_1012981_+	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_014486095.1|1013009_1013789_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486094.1|1013822_1014620_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003808978.1|1017274_1017667_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486091.1|1017660_1018521_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003818691.1|1018524_1019487_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_014486089.1|1020263_1020953_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.8	4.8e-12
WP_010930208.1|1021813_1022764_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931181.1|1023113_1023983_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010926062.1|1024053_1024749_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_010931179.1|1024738_1025248_+	nucleoside deaminase	NA	NA	NA	NA	NA
WP_010931178.1|1025244_1026465_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931177.1|1026412_1027315_-	transcriptional regulator GcvA	NA	NA	NA	NA	NA
WP_023997744.1|1028201_1029488_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931176.1|1029526_1030900_+	amidase	NA	NA	NA	NA	NA
WP_010931175.1|1030938_1031640_-	riboflavin synthase	NA	NA	NA	NA	NA
WP_010931174.1|1031938_1032928_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003809010.1|1033028_1033490_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931173.1|1033505_1034054_-	cysteine dioxygenase family protein	NA	NA	NA	NA	NA
WP_010931172.1|1034195_1035671_-	acyl--CoA ligase	NA	Q75ZG1	Hepacivirus	25.6	3.0e-35
WP_010931171.1|1035776_1036868_+	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
WP_010931170.1|1036871_1037654_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931169.1|1037663_1038452_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.0	1.1e-33
WP_010931168.1|1039577_1040012_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_010931167.1|1040008_1041019_-	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_003809025.1|1041062_1041989_-	VOC family protein	NA	NA	NA	NA	NA
WP_003809026.1|1042275_1042644_+	DUF861 domain-containing protein	NA	NA	NA	NA	NA
WP_154698394.1|1042696_1042843_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853143.1|1042860_1043811_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931165.1|1043855_1046282_+	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	33.8	1.2e-86
WP_010931164.1|1046330_1047023_+	HD domain-containing protein	NA	A0A1D6Y7U0	Golden_Marseillevirus	29.9	4.7e-07
WP_010931163.1|1047095_1048295_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_003819549.1|1048312_1049218_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931162.1|1049333_1050263_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010931161.1|1050288_1051635_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931160.1|1051662_1052412_+	SDR family oxidoreductase	NA	A0A0M4JSW6	Mollivirus	26.4	1.2e-11
WP_010931159.1|1052425_1053208_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_005012067.1|1053400_1054351_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931158.1|1054412_1055522_-	porin	NA	NA	NA	NA	NA
WP_003815281.1|1056034_1056871_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
WP_023997028.1|1056940_1057906_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|1057902_1058853_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023998107.1|1058870_1059041_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247492.1|1059238_1059781_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1060816_1061767_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247402.1|1062008_1062377_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019248356.1|1062422_1063547_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931156.1|1064681_1065434_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931155.1|1065525_1066146_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852714.1|1066249_1067200_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931154.1|1067196_1069305_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003820814.1|1069449_1070109_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_003820813.1|1070140_1070605_-	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_019248355.1|1070880_1071066_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931153.1|1071117_1071870_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931152.1|1071876_1073139_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_023852748.1|1073180_1074419_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820806.1|1075496_1076624_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_003814524.1|1076634_1077462_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_010931150.1|1077448_1078315_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010931149.1|1079681_1080086_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|1080177_1081128_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_155120814.1|1081145_1081310_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033446288.1|1081497_1082409_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003820799.1|1082423_1083134_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931147.1|1083130_1084375_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003820797.1|1084376_1084811_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_003814535.1|1084839_1085145_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_005012067.1|1085243_1086194_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247277.1|1086250_1087405_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_010930176.1|1087479_1088430_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931144.1|1088961_1089759_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247918.1|1089806_1090460_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003814544.1|1090416_1091505_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_003814547.1|1091669_1093895_-	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_023852715.1|1096172_1097069_+	inositol monophosphatase	NA	NA	NA	NA	NA
WP_162268686.1|1097022_1097172_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1097189_1098140_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP011179	Bordetella pertussis strain F670 chromosome, complete genome	4103215	1128526	1199498	4103215	protease,transposase	uncultured_Mediterranean_phage(25.0%)	53	NA	NA
WP_005012808.1|1128526_1129477_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931130.1|1129533_1130646_+	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_005012067.1|1133029_1133980_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931129.1|1134570_1135347_+	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_003812908.1|1135464_1135728_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931128.1|1135828_1136833_-	FecR domain-containing protein	NA	NA	NA	NA	NA
WP_010931127.1|1137033_1138635_-	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931126.1|1138660_1139419_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931125.1|1139510_1140167_-	adenylate kinase	NA	NA	NA	NA	NA
WP_010931124.1|1140257_1141022_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003812895.1|1141031_1141220_-	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931123.1|1141275_1142319_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_010931122.1|1142315_1142729_-	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_003812889.1|1142725_1143346_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_005012067.1|1143626_1144577_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931120.1|1144744_1146136_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_010931119.1|1146208_1146787_+	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_019247560.1|1146903_1148301_+	chloride channel protein	NA	NA	NA	NA	NA
WP_010931117.1|1148416_1149622_+	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_003820399.1|1149721_1150240_-	DUF192 domain-containing protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_003812875.1|1150334_1150580_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820400.1|1150807_1151122_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_010931116.1|1151211_1156401_+	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_010931115.1|1156397_1158566_+	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_010931114.1|1158621_1160937_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.1e-164
WP_003820402.1|1160941_1162261_+	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_014905522.1|1162279_1163953_+	MCE family protein	NA	NA	NA	NA	NA
WP_010931111.1|1163957_1164626_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_010931110.1|1164782_1168604_+	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_154698391.1|1168758_1168917_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930800.1|1168934_1169885_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812857.1|1169906_1171052_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|1171200_1172130_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812851.1|1172126_1173215_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_010931109.1|1173211_1174015_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812846.1|1174011_1174743_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931108.1|1174800_1176090_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931107.1|1176186_1176789_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812839.1|1181343_1181682_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931105.1|1182389_1182656_+	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_005012067.1|1184362_1185313_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931103.1|1185309_1186641_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931102.1|1187901_1189902_+	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_003819722.1|1189894_1190536_+	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_003809276.1|1190532_1190940_+	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_010931101.1|1190936_1191737_+	SURF1 family protein	NA	NA	NA	NA	NA
WP_010931100.1|1191811_1192516_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931099.1|1192547_1193342_+	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_005013747.1|1193338_1194289_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995489.1|1194387_1195338_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812014.1|1195436_1195871_-	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_010931098.1|1195953_1198290_+	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.8	3.2e-124
WP_010930525.1|1198481_1199498_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_CP011179	Bordetella pertussis strain F670 chromosome, complete genome	4103215	1246892	1327767	4103215	tRNA,transposase	Bacillus_virus(25.0%)	59	NA	NA
WP_010927663.1|1246892_1247843_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931070.1|1247839_1248790_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931069.1|1249050_1250079_-	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010931068.1|1250158_1251457_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_003816847.1|1251453_1252035_-	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010931067.1|1252347_1256394_+	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
WP_010931066.1|1256634_1264296_+	hemagglutinin repeat-containing protein	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
WP_005012067.1|1264292_1265243_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931065.1|1266382_1266856_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931064.1|1266995_1267616_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010931063.1|1267751_1268552_+	aldolase	NA	NA	NA	NA	NA
WP_003810897.1|1268606_1269698_+	TRAP transporter substrate-binding protein DctP	NA	NA	NA	NA	NA
WP_010931062.1|1269719_1270163_-	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_010931061.1|1270191_1270824_-	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA	NA
WP_003810909.1|1270934_1271351_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931060.1|1271343_1272036_+	DUF2238 domain-containing protein	NA	NA	NA	NA	NA
WP_010931059.1|1272142_1272517_+	MAPEG family protein	NA	NA	NA	NA	NA
WP_010931058.1|1272593_1273403_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931057.1|1273498_1274443_+	dihydrodipicolinate synthase family protein	NA	NA	NA	NA	NA
WP_003816577.1|1274481_1275453_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003810921.1|1275543_1275981_-	carboxypeptidase regulatory-like domain-containing protein	NA	NA	NA	NA	NA
WP_029443733.1|1276039_1276921_-	NRDE family protein	NA	NA	NA	NA	NA
WP_010931054.1|1277924_1278785_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010931053.1|1278817_1280200_+	FAD-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	28.4	7.9e-30
WP_010931052.1|1280196_1281216_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247407.1|1281588_1282083_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931051.1|1282090_1282831_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931050.1|1282911_1284516_-	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA	NA
WP_010931049.1|1284555_1285344_-	DeoR family transcriptional regulator	NA	A0A077SK06	Escherichia_phage	30.4	2.0e-22
WP_010931048.1|1286546_1287635_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.1	9.7e-15
WP_010931047.1|1288515_1289328_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_004568502.1|1289340_1289649_+	DUF2160 domain-containing protein	NA	NA	NA	NA	NA
WP_010931046.1|1289766_1291497_+	carbohydrate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019249399.1|1291498_1292644_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931044.1|1292773_1293442_-	DUF502 domain-containing protein	NA	NA	NA	NA	NA
WP_003810957.1|1293563_1294031_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_019247521.1|1294166_1295549_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_014486086.1|1295545_1296670_+	DNA repair exonuclease	NA	NA	NA	NA	NA
WP_010931042.1|1296666_1299303_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010931070.1|1299718_1300669_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931041.1|1304415_1305027_-	DUF2239 family protein	NA	NA	NA	NA	NA
WP_003812368.1|1305249_1306710_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.3	1.6e-97
WP_010931040.1|1306806_1308399_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	33.3	1.0e-17
WP_019247974.1|1308752_1309010_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003816876.1|1309011_1310352_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010931038.1|1310447_1311137_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247976.1|1311149_1312580_+	MFS transporter	NA	NA	NA	NA	NA
WP_014905903.1|1314304_1315126_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931036.1|1315136_1316708_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010931035.1|1316736_1317714_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931034.1|1317740_1318544_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.2	2.7e-30
WP_010931033.1|1318540_1319335_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003816890.1|1319342_1320578_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_010931032.1|1320570_1321005_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|1321754_1322705_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931031.1|1323326_1325054_-	sulfate permease	NA	NA	NA	NA	NA
WP_010931030.1|1325165_1326524_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_023853289.1|1326580_1326799_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1326816_1327767_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_CP011179	Bordetella pertussis strain F670 chromosome, complete genome	4103215	1447162	1499315	4103215	tRNA,transposase	Salmonella_phage(25.0%)	46	NA	NA
WP_005013747.1|1447162_1448113_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023999730.1|1448130_1448283_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814065.1|1448279_1448633_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814063.1|1448645_1449008_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814061.1|1449049_1449475_-	DUF1841 family protein	NA	NA	NA	NA	NA
WP_003814059.1|1449677_1450934_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	64.8	1.2e-11
WP_003814057.1|1451132_1452113_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005015028.1|1452262_1453504_+	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1453602_1454553_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814052.1|1454561_1455257_-	two-component system response regulator KdpE	NA	NA	NA	NA	NA
WP_003814050.1|1458078_1458678_-	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
WP_010930950.1|1458688_1460854_-	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	27.1	1.2e-24
WP_010930949.1|1460877_1462662_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA	NA
WP_017685545.1|1462661_1462751_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_003814042.1|1463445_1463718_+	DUF4212 domain-containing protein	NA	NA	NA	NA	NA
WP_003814040.1|1463717_1465784_+	cation acetate symporter	NA	NA	NA	NA	NA
WP_010929577.1|1465780_1466731_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|1466829_1467780_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005015014.1|1467895_1468228_-	multidrug transporter	NA	NA	NA	NA	NA
WP_010929073.1|1468224_1468911_-	Smr/MutS family protein	NA	NA	NA	NA	NA
WP_010930948.1|1468897_1469857_-	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
WP_003814032.1|1469898_1472259_+	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
WP_010930946.1|1472258_1472891_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_010930945.1|1472992_1474333_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
WP_010930944.1|1474379_1475735_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
WP_170954289.1|1475860_1476505_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814024.1|1476449_1476767_-	virulence factor	NA	NA	NA	NA	NA
WP_003814023.1|1477039_1477555_-	hypothetical protein	NA	T1SAR8	Salmonella_phage	44.6	5.1e-06
WP_003814022.1|1477648_1477810_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814021.1|1477825_1478581_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_019247690.1|1478919_1479126_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814020.1|1479133_1479793_-	NAAT family transporter	NA	NA	NA	NA	NA
WP_010930941.1|1480087_1482292_-	TonB-dependent alcaligin siderophore receptor FauA	NA	NA	NA	NA	NA
WP_010930940.1|1482402_1483626_-	alcaligin siderophore export MFS transporter Bcr	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
WP_003814017.1|1483748_1484723_-	alcaligin siderophore biosynthesis transcriptional regulator AlcR	NA	NA	NA	NA	NA
WP_005013753.1|1484790_1485984_-	alcaligin siderophore biosynthesis protein AlcE	NA	NA	NA	NA	NA
WP_003814016.1|1485998_1486799_-	alcaligin siderophore biosynthesis protein AlcD	NA	NA	NA	NA	NA
WP_010930939.1|1486795_1488652_-	alcaligin siderophore biosynthesis protein AlcC	NA	NA	NA	NA	NA
WP_003814014.1|1488648_1489254_-	alcaligin siderophore biosynthesis protein AlcB	NA	NA	NA	NA	NA
WP_003814013.1|1489272_1490658_-	alcaligin siderophore biosynthesis protein AlcA	NA	NA	NA	NA	NA
WP_003814012.1|1491383_1492610_+	cation:proton antiporter	NA	NA	NA	NA	NA
WP_003814011.1|1492698_1493481_+	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|1493579_1494530_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814010.1|1494556_1495330_+	peroxide stress protein YaaA	NA	NA	NA	NA	NA
WP_003814009.1|1495341_1496583_+	MFS transporter	NA	NA	NA	NA	NA
WP_076879548.1|1498364_1499315_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP011179	Bordetella pertussis strain F670 chromosome, complete genome	4103215	1543240	1611327	4103215	tRNA,transposase	Streptococcus_virus(11.11%)	59	NA	NA
WP_010930416.1|1543240_1543729_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_019248504.1|1543846_1544425_+	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010930418.1|1544530_1544899_+	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|1544997_1545948_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994932.1|1545954_1547067_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
WP_010930419.1|1547753_1548956_+	MFS transporter	NA	NA	NA	NA	NA
WP_004568212.1|1548991_1549138_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930420.1|1549159_1551820_+	PD-(D/E)XK nuclease family protein	NA	NA	NA	NA	NA
WP_010930421.1|1551832_1555237_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_023995689.1|1555904_1558130_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.5	1.2e-43
WP_010930423.1|1558176_1558503_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_010930424.1|1558553_1559162_+	recombination protein RecR	NA	NA	NA	NA	NA
WP_005013747.1|1559260_1560211_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930425.1|1560280_1561045_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930426.1|1561041_1561641_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930427.1|1561744_1562596_-	neutral zinc metallopeptidase	NA	A0A1I9SA48	Rhodococcus_phage	35.3	7.0e-37
WP_010928449.1|1562655_1563282_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
WP_005012067.1|1563278_1564229_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019249265.1|1564327_1565440_-	DUF1513 domain-containing protein	NA	NA	NA	NA	NA
WP_019248041.1|1565429_1566431_-	imelysin family protein	NA	NA	NA	NA	NA
WP_019247498.1|1566536_1568048_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_023853587.1|1568044_1569349_-	imelysin	NA	NA	NA	NA	NA
WP_010930431.1|1569460_1570021_-	membrane protein	NA	NA	NA	NA	NA
WP_010930432.1|1570288_1570843_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	32.0	1.7e-15
WP_010930433.1|1571298_1571514_-	dodecin domain-containing protein	NA	NA	NA	NA	NA
WP_033446228.1|1571768_1574366_+	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	22.6	1.5e-21
WP_010930435.1|1574362_1575550_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_019248658.1|1576209_1576824_+	fimbrial protein	NA	NA	NA	NA	NA
WP_010930437.1|1576912_1578040_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA	NA
WP_033446216.1|1578051_1578957_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_005012067.1|1579849_1580800_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930439.1|1580981_1581734_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
WP_003811112.1|1581802_1582462_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
WP_003811113.1|1582458_1583187_+	glutamine ABC transporter ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	39.3	3.3e-35
WP_010930440.1|1583199_1585479_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	32.1	5.9e-06
WP_010930441.1|1585503_1585707_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_010930442.1|1585748_1586381_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	33.9	2.4e-13
WP_010930443.1|1586516_1587434_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_010930444.1|1587430_1588144_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_003811135.1|1588381_1589152_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003811137.1|1589156_1589756_-	C40 family peptidase	NA	A0A0A8WF62	Clostridium_phage	41.6	1.4e-20
WP_003811138.1|1590000_1591491_+	AMP nucleosidase	NA	NA	NA	NA	NA
WP_010926696.1|1591549_1591834_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930445.1|1591971_1592127_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811148.1|1592399_1593326_-	YicC family protein	NA	NA	NA	NA	NA
WP_003811149.1|1593462_1594203_+	ribonuclease PH	NA	NA	NA	NA	NA
WP_010930446.1|1594369_1595746_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003811152.1|1595927_1596833_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930448.1|1598484_1600287_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010930449.1|1600413_1601055_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA	NA
WP_005012808.1|1601153_1602104_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930450.1|1602125_1603346_+	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
WP_003811164.1|1603531_1604944_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_003811167.1|1605007_1606075_+	PAS domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
WP_010930451.1|1606074_1607562_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
WP_010930452.1|1607571_1608516_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811176.1|1608675_1609374_+	pirin family protein	NA	NA	NA	NA	NA
WP_010930453.1|1609451_1610357_+	pirin family protein	NA	NA	NA	NA	NA
WP_005012067.1|1610376_1611327_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP011179	Bordetella pertussis strain F670 chromosome, complete genome	4103215	1647276	1702867	4103215	transposase	Brazilian_cedratvirus(25.0%)	47	NA	NA
WP_005013747.1|1647276_1648227_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930486.1|1648285_1649059_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486074.1|1649051_1650608_+	LTA synthase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1650604_1651555_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810741.1|1652881_1653484_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810743.1|1653723_1654425_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003816696.1|1654418_1655201_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_005012808.1|1655385_1656336_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930483.1|1656434_1657172_-	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_010926609.1|1657361_1658120_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930482.1|1658166_1659156_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930481.1|1659333_1660302_-	transporter	NA	NA	NA	NA	NA
WP_010930480.1|1661841_1662810_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930479.1|1662818_1663760_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|1664233_1665244_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930477.1|1665234_1666749_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930476.1|1666745_1668092_+	BatD family protein	NA	NA	NA	NA	NA
WP_010930475.1|1668094_1669129_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_023852967.1|1669178_1670804_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_005012067.1|1671356_1672307_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930487.1|1672411_1673359_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247865.1|1673412_1675227_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_010930489.1|1675219_1675894_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_023995112.1|1676023_1679098_+	autotransporter SphB2	NA	NA	NA	NA	NA
WP_019247905.1|1679111_1679411_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930492.1|1679725_1680349_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_010930493.1|1680592_1681462_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010930494.1|1681439_1682384_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247909.1|1682469_1683396_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247910.1|1683508_1684288_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930497.1|1684278_1685475_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010930498.1|1685505_1686456_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_010930499.1|1686677_1687367_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930500.1|1687431_1688187_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930501.1|1688238_1689231_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930502.1|1689240_1690194_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811538.1|1690309_1691272_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019249376.1|1692673_1693102_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1693098_1694049_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_170954298.1|1694342_1695080_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_010930504.1|1695503_1696691_-	MFS transporter	NA	NA	NA	NA	NA
WP_019249653.1|1696694_1697075_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930506.1|1698794_1699766_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930507.1|1699779_1700493_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930508.1|1700497_1701415_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811452.1|1701521_1701818_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929588.1|1701916_1702867_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP011179	Bordetella pertussis strain F670 chromosome, complete genome	4103215	1935631	2005283	4103215	tRNA,transposase	Staphylococcus_phage(16.67%)	55	NA	NA
WP_003818515.1|1935631_1938289_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	39.0	3.3e-173
WP_010930709.1|1938366_1939569_-	MFS transporter	NA	NA	NA	NA	NA
WP_003810260.1|1939565_1940078_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247822.1|1940200_1940638_-	HU family DNA-binding protein	NA	NA	NA	NA	NA
WP_010931070.1|1940914_1941865_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_062826579.1|1941963_1942914_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930710.1|1943167_1944973_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.5	2.2e-19
WP_010930711.1|1945086_1945254_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_003810297.1|1945317_1945554_-	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_010930712.1|1945922_1947122_-	multidrug effflux MFS transporter	NA	NA	NA	NA	NA
WP_010929591.1|1948637_1949588_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818523.1|1950039_1951041_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810306.1|1951213_1952071_+	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA	NA
WP_003810308.1|1952067_1953330_+	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.8e-28
WP_003818524.1|1953430_1953805_+	tautomerase family protein	NA	NA	NA	NA	NA
WP_010930713.1|1953877_1955065_+	acetyl-CoA C-acyltransferase family protein	NA	NA	NA	NA	NA
WP_010930714.1|1955149_1955920_+	spermidine synthase	NA	NA	NA	NA	NA
WP_010930715.1|1956033_1956798_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930716.1|1956748_1958050_+	malonyl-CoA decarboxylase family protein	NA	NA	NA	NA	NA
WP_010930717.1|1958046_1958853_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003818532.1|1960597_1961569_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003818533.1|1961725_1962238_+	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	52.3	1.8e-43
WP_010930718.1|1962396_1963371_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930719.1|1964371_1965166_+	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.7	5.1e-05
WP_003818535.1|1965191_1965998_-	TOBE domain-containing protein	NA	NA	NA	NA	NA
WP_003810329.1|1966108_1966699_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_010930720.1|1966709_1967888_+	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_010930721.1|1967990_1968365_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_019248531.1|1968617_1969949_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_019247651.1|1970015_1973246_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_003810344.1|1974736_1975483_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_010930724.1|1975567_1976029_+	holo-ACP synthase	NA	NA	NA	NA	NA
WP_010930725.1|1976066_1977125_+	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_010930726.1|1977087_1978917_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_003810356.1|1978956_1979529_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930727.1|1980953_1981775_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	4.1e-42
WP_010930728.1|1982093_1983416_+	isocitrate lyase	NA	NA	NA	NA	NA
WP_010930729.1|1983775_1984411_+	membrane protein	NA	NA	NA	NA	NA
WP_010930730.1|1984370_1985321_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930731.1|1986191_1987064_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930732.1|1987141_1988281_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930733.1|1988639_1989896_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_003816691.1|1989901_1990429_+	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_003816690.1|1990433_1991252_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003816687.1|1991251_1991974_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930735.1|1991995_1992310_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930736.1|1992327_1993476_+	CoA transferase	NA	NA	NA	NA	NA
WP_010930737.1|1993506_1994382_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816680.1|1994378_1995698_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_014486081.1|1995770_1996967_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_010930739.1|1996977_1998465_-	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_010930740.1|2001059_2001959_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852887.1|2002096_2003062_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005015810.1|2003160_2004111_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2004332_2005283_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
NZ_CP011179	Bordetella pertussis strain F670 chromosome, complete genome	4103215	2016779	2066175	4103215	transposase	Erysipelothrix_phage(16.67%)	45	NA	NA
WP_005013747.1|2016779_2017730_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812172.1|2018867_2019164_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247707.1|2019338_2020691_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	2.9e-45
WP_010930153.1|2020833_2021850_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930748.1|2023829_2024843_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_010930749.1|2024929_2025835_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812179.1|2025991_2026336_+	exported protein	NA	NA	NA	NA	NA
WP_010930750.1|2026493_2026952_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_010930751.1|2026965_2029182_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_003812183.1|2029178_2030240_+	XdhC family protein	NA	NA	NA	NA	NA
WP_010930752.1|2030268_2031243_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930753.1|2031194_2032013_-	hypothetical protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	28.8	2.3e-16
WP_003812191.1|2032025_2032634_-	LON peptidase substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930754.1|2032808_2033204_+	VOC family protein	NA	NA	NA	NA	NA
WP_010930755.1|2033222_2034662_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	37.4	7.4e-55
WP_003812199.1|2034690_2035038_+	GFA family protein	NA	NA	NA	NA	NA
WP_010929577.1|2035056_2036007_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2036659_2037610_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997035.1|2037693_2039511_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
WP_019247659.1|2039584_2040232_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930758.1|2040244_2041174_-	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_014905663.1|2041343_2041808_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003816977.1|2042055_2042736_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_077068999.1|2042784_2044476_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.1	7.2e-41
WP_010930760.1|2044491_2045043_-	SRPBCC family protein	NA	NA	NA	NA	NA
WP_003816971.1|2045039_2045411_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930761.1|2045523_2046360_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_029443822.1|2046370_2046895_-	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_003812228.1|2046992_2047172_+	DUF3008 family protein	NA	NA	NA	NA	NA
WP_010930763.1|2047301_2048276_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003816964.1|2048406_2048763_+	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
WP_010930764.1|2048752_2049628_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_010930765.1|2049726_2050611_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930766.1|2050632_2051928_-	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_003816959.1|2052876_2053527_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930767.1|2053614_2055135_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930768.1|2055392_2057258_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|2058303_2059254_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268681.1|2059271_2059412_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930769.1|2060226_2060586_-	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_010930770.1|2060573_2062010_-	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930771.1|2062006_2062660_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930772.1|2062656_2063850_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930773.1|2063953_2065228_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_005012067.1|2065224_2066175_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
NZ_CP011179	Bordetella pertussis strain F670 chromosome, complete genome	4103215	2077379	2118070	4103215	protease,tRNA,transposase	Klosneuvirus(25.0%)	36	NA	NA
WP_005013747.1|2077379_2078330_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2078428_2079379_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122784.1|2079338_2079752_-	transcriptional regulator	NA	A0A222YXG1	Escherichia_phage	59.0	3.8e-36
WP_003816708.1|2080036_2080336_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930783.1|2080745_2083028_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	30.1	3.2e-36
WP_010930784.1|2083713_2085744_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	41.9	1.0e-65
WP_006218592.1|2085763_2085976_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_003810720.1|2086253_2086793_-	phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_023852902.1|2086906_2088202_-	adenylosuccinate synthase	NA	A0A160ER07	Powai_lake_megavirus	33.5	3.0e-63
WP_010930786.1|2088278_2089436_-	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
WP_010930787.1|2089619_2090519_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_010930788.1|2090537_2091842_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930789.1|2091807_2092914_-	GTPase HflX	NA	NA	NA	NA	NA
WP_003810707.1|2093001_2093238_-	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930790.1|2093376_2094447_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810703.1|2094450_2095806_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_003810701.1|2095832_2096993_-	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_010930791.1|2096995_2097634_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_023995843.1|2097635_2098922_-|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930793.1|2098980_2100276_-	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_003810693.1|2100282_2100789_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_004568542.1|2100785_2101934_-	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_003810689.1|2101961_2102387_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
WP_010930794.1|2102709_2105592_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
WP_023852900.1|2105684_2106440_-	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_010930796.1|2107205_2108555_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_076879566.1|2108653_2109604_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930048.1|2109702_2110653_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930594.1|2110726_2111200_+	RidA family protein	NA	NA	NA	NA	NA
WP_010930593.1|2111225_2112434_+	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_003816734.1|2112430_2113204_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_014905757.1|2113203_2113827_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_010926757.1|2113992_2114253_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_010930591.1|2114556_2115138_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004568544.1|2115204_2115459_-	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_010930590.1|2115445_2118070_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
>prophage 18
NZ_CP011179	Bordetella pertussis strain F670 chromosome, complete genome	4103215	2145853	2211396	4103215	protease,tRNA,transposase	Lake_Baikal_phage(20.0%)	58	NA	NA
WP_010929577.1|2145853_2146804_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930573.1|2147004_2147814_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_005013747.1|2147938_2148889_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930572.1|2148885_2149779_-	methylglyoxal synthase	NA	NA	NA	NA	NA
WP_003812452.1|2149903_2150098_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA	NA
WP_003812453.1|2150097_2150439_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_010930571.1|2150448_2152311_-	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	42.4	3.0e-101
WP_003812456.1|2152440_2152953_-	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA	NA
WP_003812458.1|2152955_2153279_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	52.8	6.8e-25
WP_003812460.1|2153280_2153691_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	79.0	7.5e-53
WP_010930570.1|2153728_2154940_-	IscS subfamily cysteine desulfurase	NA	NA	NA	NA	NA
WP_003812463.1|2154957_2155470_-	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA	NA
WP_010930569.1|2155685_2156177_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
WP_010930568.1|2156429_2158466_-	excinuclease ABC subunit UvrB	NA	NA	NA	NA	NA
WP_019247244.1|2158543_2159746_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_010930566.1|2159874_2160525_+	transcriptional repressor LexA	NA	A0A2H4JG58	uncultured_Caudovirales_phage	50.7	3.3e-10
WP_005012067.1|2162082_2163033_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247934.1|2163603_2163816_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247935.1|2163833_2164565_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812478.1|2164599_2165241_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010930565.1|2165233_2165902_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010930564.1|2168114_2168891_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930563.1|2168912_2170070_-	thiolase	NA	NA	NA	NA	NA
WP_003812491.1|2170066_2170498_-	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_015063637.1|2170494_2171298_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010930561.1|2171311_2171713_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_010930560.1|2171779_2172751_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930559.1|2172816_2174040_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247936.1|2174267_2175218_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930557.1|2175341_2177795_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.0	1.5e-220
WP_010930556.1|2177983_2179288_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	53.8	3.2e-129
WP_003812508.1|2179392_2180046_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	57.5	6.8e-56
WP_010930555.1|2180048_2181359_-	trigger factor	NA	NA	NA	NA	NA
WP_010930554.1|2181555_2182116_+	TIGR00645 family protein	NA	K4K6D8	Caulobacter_phage	33.7	1.0e-23
WP_010930553.1|2182227_2182428_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.4	7.4e-14
WP_003812519.1|2182773_2183340_-	DUF924 family protein	NA	NA	NA	NA	NA
WP_010930551.1|2183423_2183627_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.1	1.6e-16
WP_003812524.1|2183933_2184254_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812526.1|2184295_2184577_-	membrane protein	NA	NA	NA	NA	NA
WP_010930550.1|2184651_2185908_-	autotransporter Phg	NA	NA	NA	NA	NA
WP_010930549.1|2186290_2186620_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003812536.1|2188190_2189012_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
WP_010930548.1|2189011_2190151_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
WP_019247938.1|2190157_2191054_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_010930546.1|2191050_2192976_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	31.8	1.1e-66
WP_010926400.1|2193335_2195948_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_003812546.1|2196000_2198301_-	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	35.9	9.9e-110
WP_003812548.1|2198297_2199506_-	fatty acid desaturase	NA	NA	NA	NA	NA
WP_077069000.1|2199767_2200136_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2200132_2201083_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879626.1|2201181_2203176_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.3	4.4e-21
WP_010930543.1|2203235_2204201_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_010930542.1|2204190_2207052_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
WP_010930541.1|2207054_2207561_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_010930540.1|2207665_2208874_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	30.0	3.8e-36
WP_033446178.1|2208875_2209814_-	membrane protein	NA	NA	NA	NA	NA
WP_010930538.1|2209975_2210449_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|2210445_2211396_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
NZ_CP011179	Bordetella pertussis strain F670 chromosome, complete genome	4103215	2505019	2563263	4103215	tRNA,transposase	Planktothrix_phage(28.57%)	54	NA	NA
WP_005012067.1|2505019_2505970_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930388.1|2506449_2507106_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA	NA
WP_010930387.1|2507120_2508788_-	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_010930386.1|2508790_2509420_-	TRAP transporter small permease subunit	NA	NA	NA	NA	NA
WP_014486072.1|2509631_2510726_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930384.1|2510870_2511683_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_023853502.1|2511686_2513390_-	FimV N-terminal domain protein	NA	NA	NA	NA	NA
WP_010930382.1|2513440_2514571_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930381.1|2514757_2515834_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_010930380.1|2515915_2516566_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_010930379.1|2516580_2517984_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
WP_004567445.1|2518267_2519086_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930378.1|2519082_2519787_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.0	2.6e-13
WP_010930377.1|2520686_2521802_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_004567447.1|2521835_2522210_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930376.1|2522232_2523390_-	formate dehydrogenase subunit gamma	NA	NA	NA	NA	NA
WP_003812666.1|2523402_2523636_-	lipoprotein	NA	NA	NA	NA	NA
WP_019247523.1|2524270_2527240_-	formate dehydrogenase subunit alpha	NA	NA	NA	NA	NA
WP_023853518.1|2527254_2527464_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248667.1|2527615_2528245_-	molecular chaperone TorD family protein	NA	NA	NA	NA	NA
WP_010930373.1|2528241_2530332_-	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_010930372.1|2530355_2531036_-	DUF3306 domain-containing protein	NA	NA	NA	NA	NA
WP_003820494.1|2531032_2531593_-	DUF3305 domain-containing protein	NA	NA	NA	NA	NA
WP_004567450.1|2531599_2532697_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010930371.1|2532849_2533443_+	molybdenum cofactor guanylyltransferase MobA	NA	NA	NA	NA	NA
WP_010930370.1|2533439_2534732_+	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_003812685.1|2534745_2535288_+	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA	NA
WP_010930369.1|2535297_2536134_-	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003820487.1|2536167_2537229_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	42.8	2.9e-80
WP_019247210.1|2537270_2538323_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_019247209.1|2538338_2538641_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|2538782_2539733_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268680.1|2539750_2539915_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930368.1|2539911_2541606_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003809599.1|2541602_2542688_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	6.4e-27
WP_010930367.1|2542735_2543635_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003809593.1|2543645_2544290_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_010930366.1|2545311_2548554_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_023852833.1|2548564_2549719_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.4	3.3e-53
WP_010930364.1|2549945_2550908_+	transaldolase	NA	H6WFR1	Cyanophage	29.2	7.5e-11
WP_076879624.1|2551006_2551957_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930363.1|2552055_2553006_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930362.1|2553015_2553705_-	VIT family protein	NA	NA	NA	NA	NA
WP_003811741.1|2553764_2554202_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003811743.1|2554247_2555141_-	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003811746.1|2555188_2556361_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003811748.1|2556357_2557512_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003811750.1|2557708_2558059_-	RnfH family protein	NA	NA	NA	NA	NA
WP_003811752.1|2558048_2558483_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_010930800.1|2558499_2559450_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811754.1|2559597_2560065_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
WP_010930360.1|2560045_2561203_-	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
WP_003811759.1|2561268_2562195_-	paraslipin	NA	NA	NA	NA	NA
WP_005012067.1|2562312_2563263_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NZ_CP011179	Bordetella pertussis strain F670 chromosome, complete genome	4103215	2605543	2672043	4103215	transposase	uncultured_Caudovirales_phage(40.0%)	56	NA	NA
WP_005012067.1|2605543_2606494_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811850.1|2606863_2607436_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA	NA
WP_003811852.1|2607438_2608449_+	flagellar motor switch protein FliM	NA	NA	NA	NA	NA
WP_010930335.1|2608441_2608942_+	flagellar motor switch protein FliN	NA	NA	NA	NA	NA
WP_003811855.1|2608952_2609294_+	flagellar biosynthetic protein FliO	NA	NA	NA	NA	NA
WP_015041547.1|2609305_2610097_+	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA	NA
WP_003811859.1|2610113_2610383_+	flagellar biosynthesis protein FliQ	NA	NA	NA	NA	NA
WP_010930333.1|2610405_2611194_+	flagellar biosynthetic protein FliR	NA	NA	NA	NA	NA
WP_010929632.1|2611240_2612257_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_014486070.1|2612473_2613916_-	PAS domain-containing protein	NA	A0A1B0V854	Salmonella_phage	41.8	1.0e-35
WP_010930332.1|2614094_2615714_-	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	45.3	1.5e-08
WP_010930331.1|2615834_2617655_-	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	52.6	6.4e-11
WP_010930330.1|2617733_2619266_-	flagellar hook-associated protein FlgL	NA	NA	NA	NA	NA
WP_010930329.1|2619299_2620946_-	flagellar hook-associated protein FlgK	NA	NA	NA	NA	NA
WP_010930328.1|2621015_2622038_-	flagellar assembly peptidoglycan hydrolase FlgJ	NA	A0A088F6W1	Sulfitobacter_phage	31.4	1.9e-12
WP_010930327.1|2622055_2623189_-	flagellar basal body P-ring protein FlgI	NA	NA	NA	NA	NA
WP_010930326.1|2623191_2623881_-	flagellar basal body L-ring protein FlgH	NA	NA	NA	NA	NA
WP_010930325.1|2623880_2624666_-	flagellar basal-body rod protein FlgG	NA	NA	NA	NA	NA
WP_003817181.1|2624709_2625474_-	flagellar basal body rod protein FlgF	NA	NA	NA	NA	NA
WP_003817180.1|2625512_2626934_-	flagellar hook-basal body complex protein	NA	NA	NA	NA	NA
WP_010930324.1|2626999_2627704_-	flagellar basal body rod modification protein FlgD	NA	NA	NA	NA	NA
WP_003817176.1|2627751_2628171_-	flagellar basal body rod protein FlgC	NA	NA	NA	NA	NA
WP_010930323.1|2628183_2628591_-	flagellar basal body rod protein FlgB	NA	NA	NA	NA	NA
WP_010930322.1|2628774_2629485_+	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA	NA
WP_003817172.1|2629611_2629902_+	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA	NA
WP_003817170.1|2629919_2630402_+	flagellar protein FlgN	NA	NA	NA	NA	NA
WP_010930321.1|2634907_2636062_-	flagellar type III secretion system protein FlhB	NA	NA	NA	NA	NA
WP_010931363.1|2636367_2637384_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930319.1|2637630_2638419_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003812020.1|2638485_2639166_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812022.1|2639162_2639933_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.1	9.8e-30
WP_010930208.1|2640031_2640982_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811401.1|2641037_2641955_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
WP_003811400.1|2641965_2643144_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	NA	NA	NA	NA
WP_010930318.1|2643163_2644159_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811396.1|2645747_2646356_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_003811393.1|2646343_2647384_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_003811391.1|2647401_2648364_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811389.1|2648360_2649554_-	CoA transferase	NA	NA	NA	NA	NA
WP_010930317.1|2649550_2650348_-	citryl-CoA lyase	NA	NA	NA	NA	NA
WP_014486069.1|2650373_2651360_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930316.1|2651378_2653418_-	acetate--CoA ligase family protein	NA	NA	NA	NA	NA
WP_010930315.1|2653619_2654300_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930314.1|2654313_2655225_-	CoA ester lyase	NA	NA	NA	NA	NA
WP_003811381.1|2655221_2655800_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930313.1|2655938_2656844_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930312.1|2656851_2660271_+	TM0106 family RecB-like putative nuclease	NA	NA	NA	NA	NA
WP_010930311.1|2660258_2662859_-	BP1344/BB2830 family autotransporter	NA	NA	NA	NA	NA
WP_003811375.1|2663814_2664447_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003811372.1|2664840_2665599_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_003811370.1|2665595_2666798_+	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010930208.1|2666985_2667936_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930310.1|2668843_2669989_+	DUF3182 family protein	NA	NA	NA	NA	NA
WP_019247449.1|2669975_2670731_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_003811361.1|2670847_2671027_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930208.1|2671092_2672043_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
NZ_CP011179	Bordetella pertussis strain F670 chromosome, complete genome	4103215	2871431	2944756	4103215	protease,tRNA,transposase	Catovirus(22.22%)	53	NA	NA
WP_010930211.1|2871431_2872787_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003813618.1|2874265_2874988_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930207.1|2875042_2876026_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|2876155_2877106_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813621.1|2877102_2878005_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930206.1|2878092_2878851_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_023853245.1|2878863_2879955_-	cell division protein ZapE	NA	NA	NA	NA	NA
WP_003813626.1|2880052_2881480_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	2.1e-41
WP_010930204.1|2881709_2882924_-	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_003813631.1|2882969_2885840_-	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_010930202.1|2888250_2888739_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930201.1|2888864_2891561_+	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA	NA
WP_010930200.1|2891715_2893998_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_019248935.1|2894171_2894795_+	serotype 2 fimbrial subunit	NA	NA	NA	NA	NA
WP_010930198.1|2894893_2895844_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812405.1|2895890_2896445_-	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_003816844.1|2896512_2897358_-	PHP domain-containing protein	NA	NA	NA	NA	NA
WP_019248398.1|2897427_2898396_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_023995083.1|2898395_2899259_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010930196.1|2902091_2906018_-	inverse autotransporter beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_010930194.1|2906753_2909984_-	autotransporter SphB3	NA	NA	NA	NA	NA
WP_010928340.1|2910265_2911093_-	TatD family hydrolase	NA	NA	NA	NA	NA
WP_003812422.1|2911126_2911822_-	lipoprotein-releasing ABC transporter ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	38.6	7.0e-35
WP_019247537.1|2911814_2913095_-	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010930192.1|2913104_2914082_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930191.1|2914063_2915764_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.3	1.3e-50
WP_010926448.1|2915866_2916970_+	peptide chain release factor 2	NA	NA	NA	NA	NA
WP_010926447.1|2917000_2917756_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930190.1|2917762_2919283_+|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
WP_010930189.1|2919325_2919628_+	membrane protein	NA	NA	NA	NA	NA
WP_003812436.1|2919624_2920257_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930188.1|2920335_2922201_-	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
WP_020699602.1|2922197_2922992_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.3	1.2e-11
WP_010930186.1|2923020_2924136_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930185.1|2925040_2925919_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930184.1|2925918_2926743_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
WP_010929591.1|2926910_2927861_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930183.1|2928073_2930923_+	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010930182.1|2930904_2931633_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_019248549.1|2931773_2933237_-	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
WP_010930180.1|2933233_2933605_-	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
WP_003812701.1|2933622_2934936_+	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_003812703.1|2934972_2935431_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_155120815.1|2935385_2935526_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2935543_2936494_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930178.1|2936490_2937504_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_003812707.1|2937643_2938630_+	homoserine kinase	NA	NA	NA	NA	NA
WP_161633091.1|2938988_2939696_-	DUF192 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|2940276_2941227_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809618.1|2941378_2941981_-	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_010930175.1|2941999_2942632_+	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
WP_162096758.1|2942676_2942928_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930174.1|2942869_2944756_+|protease	ATP-dependent zinc metalloprotease FtsH	protease	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
>prophage 22
NZ_CP011179	Bordetella pertussis strain F670 chromosome, complete genome	4103215	2956481	3006094	4103215	tRNA,transposase,holin	uncultured_Mediterranean_phage(50.0%)	42	NA	NA
WP_005013747.1|2956481_2957432_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809441.1|2957458_2957923_-	barstar family protein	NA	NA	NA	NA	NA
WP_014486065.1|2959129_2961418_-	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_010930165.1|2961534_2962407_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930164.1|2962449_2963604_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_010930163.1|2963638_2964469_-	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_023853525.1|2964552_2966097_+	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
WP_010930161.1|2966139_2966499_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003819794.1|2966500_2966914_-|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_003809432.1|2966954_2967272_-	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003809431.1|2967356_2968073_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930160.1|2968336_2969758_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_019248433.1|2969824_2972572_-	pertactin autotransporter	NA	NA	NA	NA	NA
WP_023853536.1|2972904_2973921_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930157.1|2974256_2974898_-	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_003809423.1|2974988_2976425_-	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_023853534.1|2976582_2977656_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_010930155.1|2977652_2978789_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
WP_003809416.1|2978933_2979278_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.4	1.0e-10
WP_010930154.1|2979344_2981225_+	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_003809411.1|2981274_2982210_+	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.5	3.0e-41
WP_010931363.1|2982542_2983559_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_015041211.1|2984496_2985924_+|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010930151.1|2985920_2986943_+	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
WP_003809396.1|2986932_2987406_+	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_010930149.1|2987546_2988434_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_014486064.1|2988430_2990074_+	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_010930148.1|2990070_2991120_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_010931363.1|2991908_2992925_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003817162.1|2993024_2993657_-	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_003811911.1|2993665_2994055_-	chemotaxis response regulator CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
WP_010930146.1|2994107_2995160_-	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_010930145.1|2996023_2997730_-	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
WP_003811919.1|2997803_2998304_-	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_010930144.1|2998318_3000376_-	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_019247393.1|3000402_3000696_-	response regulator	NA	NA	NA	NA	NA
WP_003817154.1|3000797_3001745_-	flagellar motor protein MotB	NA	NA	NA	NA	NA
WP_003811927.1|3001757_3002633_-	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
WP_003811929.1|3002753_3003314_-	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
WP_010930143.1|3003348_3003672_-	flagellar transcriptional regulator FlhD	NA	NA	NA	NA	NA
WP_003811933.1|3004107_3004845_+	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
WP_005012067.1|3005143_3006094_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NZ_CP011179	Bordetella pertussis strain F670 chromosome, complete genome	4103215	3014304	3076459	4103215	transposase	Erysipelothrix_phage(20.0%)	46	NA	NA
WP_023853531.1|3014304_3015438_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930137.1|3015541_3016183_+	glutathione transferase	NA	NA	NA	NA	NA
WP_010930136.1|3016337_3018686_+	DUF3141 domain-containing protein	NA	NA	NA	NA	NA
WP_003809454.1|3018682_3019621_+	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_010930135.1|3019646_3020837_+	acetate kinase	NA	NA	NA	NA	NA
WP_010930134.1|3020833_3021607_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010930133.1|3021636_3022830_-	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_010930132.1|3022947_3023958_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_010930131.1|3023975_3026012_-	transketolase	NA	NA	NA	NA	NA
WP_010930130.1|3026206_3026947_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_010929584.1|3027045_3027996_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003817151.1|3028038_3029214_+	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_010930129.1|3029435_3031226_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
WP_010930128.1|3031238_3032900_-	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
WP_010930127.1|3032912_3035618_-	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_003817147.1|3035910_3037665_+	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_010930126.1|3037661_3038288_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003811948.1|3038284_3039136_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
WP_019248379.1|3039211_3041326_+	M3 family metallopeptidase	NA	NA	NA	NA	NA
WP_010930124.1|3041512_3042127_+	SCO family protein	NA	NA	NA	NA	NA
WP_010930123.1|3042272_3042524_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_014486063.1|3042593_3043976_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010930121.1|3043972_3047152_-	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_029443805.1|3047959_3048877_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930119.1|3048928_3049660_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_010926548.1|3049719_3050292_+	chorismate lyase	NA	NA	NA	NA	NA
WP_010929632.1|3051800_3052817_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930118.1|3052954_3054004_-	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
WP_005012067.1|3054108_3055059_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|3055157_3056108_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813314.1|3056203_3056929_-	CoA pyrophosphatase	NA	NA	NA	NA	NA
WP_003813315.1|3057139_3057520_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_014905652.1|3057825_3058698_+	EamA family transporter	NA	NA	NA	NA	NA
WP_023852686.1|3058705_3059086_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023852693.1|3059239_3060514_-	PA0069 family radical SAM protein	NA	NA	NA	NA	NA
WP_010930113.1|3062001_3062910_-	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA	NA
WP_010930112.1|3063707_3064772_-	sulfate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.3	3.8e-24
WP_170954292.1|3066608_3067610_-	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003813333.1|3067832_3068474_-	peroxiredoxin	NA	NA	NA	NA	NA
WP_003821527.1|3068556_3070383_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010930111.1|3070626_3071556_-	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA	NA
WP_010930110.1|3071555_3072305_-	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
WP_003821521.1|3072376_3073291_-	histone deacetylase family protein	NA	A0A2K9KZC4	Tupanvirus	34.7	9.8e-45
WP_010930108.1|3073310_3074456_+	lytic murein transglycosylase B	NA	NA	NA	NA	NA
WP_014486062.1|3074516_3075428_-	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	38.8	8.0e-47
WP_005012067.1|3075508_3076459_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
NZ_CP011179	Bordetella pertussis strain F670 chromosome, complete genome	4103215	3095881	3151011	4103215	transposase	Bacillus_phage(28.57%)	48	NA	NA
WP_005012808.1|3095881_3096832_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566317.1|3096961_3097354_+	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
WP_003821497.1|3097630_3098542_-	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
WP_010930088.1|3098666_3099641_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|3099637_3100588_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810865.1|3100686_3101772_-	DNA polymerase IV	NA	NA	NA	NA	NA
WP_010930072.1|3101869_3102280_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003810859.1|3102895_3104809_+	S9 family peptidase	NA	NA	NA	NA	NA
WP_010930071.1|3104944_3107557_+	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_019248496.1|3107558_3108293_-	metallophosphoesterase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
WP_003810851.1|3108456_3109638_+	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_003810850.1|3109634_3109847_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930069.1|3109843_3110824_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_010930068.1|3110869_3111697_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
WP_023852913.1|3111846_3113661_+	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
WP_003810840.1|3113715_3114099_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_010930066.1|3114095_3115046_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810839.1|3115158_3115410_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|3115915_3117034_-	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810832.1|3117153_3117366_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930064.1|3117525_3117747_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|3117799_3118750_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930062.1|3119926_3121297_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_010930061.1|3121329_3122121_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930060.1|3122133_3123189_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019247557.1|3123214_3124090_-	amidohydrolase	NA	NA	NA	NA	NA
WP_023852826.1|3124195_3124444_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003819989.1|3124478_3125933_-	carboxylase	NA	NA	NA	NA	NA
WP_004568140.1|3125929_3126451_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_010930057.1|3126479_3127832_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_029444137.1|3128055_3130944_-	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010930056.1|3133088_3134390_+	phospholipase A	NA	NA	NA	NA	NA
WP_010930055.1|3134404_3135121_-	flagellar brake protein	NA	NA	NA	NA	NA
WP_010930054.1|3135402_3136083_+	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_003809770.1|3136094_3136262_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023852837.1|3136370_3136517_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930052.1|3136610_3137270_-	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
WP_010930051.1|3137668_3139501_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
WP_005012067.1|3139497_3140448_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814007.1|3141611_3143327_+	acetolactate synthase 3 catalytic subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.3	3.1e-60
WP_003814006.1|3143337_3143829_+	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_010930015.1|3143901_3144918_+	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_003814004.1|3145085_3145865_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_003814003.1|3145883_3146411_-	lipoprotein	NA	NA	NA	NA	NA
WP_003814002.1|3146704_3146974_+	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_003821234.1|3147064_3149224_+	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_003814000.1|3149344_3150064_+	lipoprotein	NA	NA	NA	NA	NA
WP_005013747.1|3150060_3151011_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 25
NZ_CP011179	Bordetella pertussis strain F670 chromosome, complete genome	4103215	3232071	3305233	4103215	transposase	Klosneuvirus(16.67%)	57	NA	NA
WP_041337087.1|3232071_3233022_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813068.1|3233018_3234038_-	class 1 fructose-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	35.7	1.5e-49
WP_010930049.1|3234047_3236756_-	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	24.0	2.8e-15
WP_010930050.1|3236903_3237560_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|3237658_3238609_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023998705.1|3238756_3239650_+	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_010930013.1|3239849_3241544_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_010930012.1|3241578_3242505_+	VOC family protein	NA	NA	NA	NA	NA
WP_010930011.1|3242573_3243671_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003818996.1|3243689_3244553_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.9	9.6e-34
WP_010930010.1|3244564_3245347_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_004566042.1|3245343_3246462_+	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
WP_010930009.1|3246458_3247991_+	acyl--CoA ligase	NA	NA	NA	NA	NA
WP_003818991.1|3248031_3249039_+	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_023999677.1|3249183_3249906_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930007.1|3249921_3250944_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_010930006.1|3251260_3251995_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930005.1|3252079_3253825_+	acetolactate synthase	NA	NA	NA	NA	NA
WP_010930004.1|3253821_3254574_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930003.1|3254618_3255575_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003818983.1|3255663_3256230_+	membrane protein	NA	NA	NA	NA	NA
WP_010930002.1|3256237_3257098_-	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_020699739.1|3257127_3257856_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.4	3.4e-32
WP_003807497.1|3257887_3258571_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010930000.1|3259408_3260323_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929999.1|3260387_3261296_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929998.1|3261386_3262811_-	TolC family protein	NA	NA	NA	NA	NA
WP_010929997.1|3262812_3264135_-	cyclolysin T1SS periplasmic adaptor subunit CyaD	NA	NA	NA	NA	NA
WP_010929996.1|3264131_3266270_-	cyclolysin T1SS permease/ATPase CyaB	NA	W8CYL7	Bacillus_phage	29.2	2.7e-45
WP_010929995.1|3266347_3271468_-	bifunctional adenylate cyclase toxin/hemolysin CyaA	NA	NA	NA	NA	NA
WP_153302771.1|3271568_3271877_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929994.1|3271946_3272504_+	cyclolysin-activating lysine-acyltransferase	NA	NA	NA	NA	NA
WP_010929993.1|3272519_3274001_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010929992.1|3276171_3277509_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_010929991.1|3277543_3279541_-	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010929990.1|3279558_3281607_-	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010929989.1|3281737_3282604_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929988.1|3282872_3283838_-	octaprenyl diphosphate synthase	NA	NA	NA	NA	NA
WP_010929987.1|3283952_3285101_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_003807462.1|3285525_3285837_+	50S ribosomal protein L21	NA	NA	NA	NA	NA
WP_003807460.1|3285870_3286131_+	50S ribosomal protein L27	NA	NA	NA	NA	NA
WP_003807459.1|3286280_3287414_+	GTPase ObgE	NA	NA	NA	NA	NA
WP_003807457.1|3287484_3288621_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	44.8	5.8e-63
WP_010925762.1|3288786_3289581_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003807452.1|3289643_3290087_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|3290202_3291153_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929985.1|3291254_3291683_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929984.1|3291755_3293951_+	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|3294172_3295123_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852739.1|3295082_3295607_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_003814467.1|3295738_3296710_+	FecR family protein	NA	NA	NA	NA	NA
WP_010929983.1|3296829_3299274_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_010929982.1|3299289_3299880_-	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|3300123_3301074_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814462.1|3301231_3302497_-	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003814461.1|3302530_3303628_-	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_005013747.1|3304282_3305233_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
NZ_CP011179	Bordetella pertussis strain F670 chromosome, complete genome	4103215	3316520	3416633	4103215	transposase,tRNA,terminase,protease,tail	uncultured_Caudovirales_phage(14.29%)	108	NA	NA
WP_005012067.1|3316520_3317471_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814437.1|3318202_3318580_+	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_003814436.1|3318564_3319266_-	membrane protein	NA	NA	NA	NA	NA
WP_010931409.1|3319409_3320102_-	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_010931410.1|3320101_3321205_-	phosphotransferase	NA	NA	NA	NA	NA
WP_010931411.1|3321314_3323687_+	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931412.1|3323683_3325243_+	chaperone SurA	NA	NA	NA	NA	NA
WP_010931413.1|3325267_3326065_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931414.1|3326096_3327242_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_003814419.1|3327346_3328789_+	pyruvate kinase	NA	NA	NA	NA	NA
WP_010929184.1|3328791_3330021_-	spore maturation protein	NA	NA	NA	NA	NA
WP_005012808.1|3332158_3333109_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247922.1|3334238_3334796_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247923.1|3334771_3335122_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814657.1|3335290_3336085_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
WP_010931416.1|3336081_3337131_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003814652.1|3337130_3337820_-	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_003814650.1|3337906_3338404_-	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_010931417.1|3338435_3339752_-	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_010931418.1|3339768_3340743_-	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_003814643.1|3340779_3341238_-	protein TolR	NA	NA	NA	NA	NA
WP_003814641.1|3341237_3341918_-	protein TolQ	NA	NA	NA	NA	NA
WP_010931419.1|3341920_3342349_-	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814636.1|3342401_3344132_-|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
WP_003814635.1|3344197_3344770_+	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_010931420.1|3344750_3345437_+	response regulator	NA	NA	NA	NA	NA
WP_010931421.1|3345792_3346464_+	SOS response-associated peptidase	NA	Q5QF62	Pseudomonas_virus	39.9	4.7e-36
WP_010931422.1|3346792_3347014_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010926433.1|3347013_3347295_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931423.1|3347291_3347807_-	DUF2514 family protein	NA	NA	NA	NA	NA
WP_010931424.1|3347806_3348358_-	lysozyme	NA	NA	NA	NA	NA
WP_010931425.1|3348336_3348579_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931426.1|3348583_3349396_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926428.1|3349395_3349659_-	hypothetical protein	NA	NA	NA	NA	NA
WP_124740660.1|3349699_3349897_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931428.1|3349877_3350294_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931429.1|3350298_3354255_-	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
WP_010931430.1|3354247_3354637_-	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931431.1|3354633_3355167_-	DUF1833 family protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931432.1|3355234_3355594_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931433.1|3355603_3358216_-|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931434.1|3358241_3358532_-	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_003813412.1|3358549_3358879_-|tail	phage tail assembly chaperone	tail	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931435.1|3358888_3359407_-|tail	phage tail protein	tail	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_010931436.1|3359661_3360162_-	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931437.1|3360169_3360592_-	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_010931438.1|3360588_3360987_-	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931439.1|3360983_3361379_-	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_010931440.1|3361378_3361579_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|3361580_3362063_-	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_010931442.1|3362125_3362377_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|3363051_3364002_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931443.1|3364430_3365033_-	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_010931444.1|3365155_3365398_-	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931445.1|3365403_3366459_-	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931446.1|3366487_3367906_-	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931447.1|3367908_3369186_-|terminase	terminase large subunit	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_019247942.1|3369172_3369658_-|transposase	transposase	transposase	C7U0W1	Enterobacteria_phage	61.5	7.3e-39
WP_005012067.1|3370297_3371248_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853183.1|3371265_3371487_+	hypothetical protein	NA	NA	NA	NA	NA
WP_161633094.1|3371504_3372194_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853179.1|3372186_3372438_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931451.1|3372992_3373604_+	S24 family peptidase	NA	NA	NA	NA	NA
WP_019247378.1|3373675_3373882_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3374133_3375084_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248926.1|3375182_3376256_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931475.1|3376423_3377218_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010925795.1|3377257_3377782_-	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931474.1|3377774_3379517_-	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010931473.1|3379726_3380485_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931472.1|3380487_3381195_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931471.1|3381211_3382093_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_019247734.1|3382103_3382862_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_019248554.1|3382830_3383586_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931468.1|3383655_3385074_+	amidase	NA	NA	NA	NA	NA
WP_003819076.1|3385095_3385746_-	carbonic anhydrase	NA	NA	NA	NA	NA
WP_033446132.1|3385879_3386215_-	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_010930800.1|3386303_3387254_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931467.1|3387330_3389151_+	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_010931466.1|3389155_3390229_-	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_003814230.1|3390351_3391320_+	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010927008.1|3391393_3392305_+	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814226.1|3392323_3392896_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010931465.1|3392976_3393525_-	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_010931464.1|3393524_3395114_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_003814221.1|3395183_3395423_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_023995141.1|3395463_3396489_-|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814217.1|3396554_3397736_-	UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase	NA	NA	NA	NA	NA
WP_010931463.1|3397832_3398285_+	membrane protein	NA	NA	NA	NA	NA
WP_010931462.1|3398294_3399635_-	aminopeptidase P N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010931461.1|3399951_3400989_+	sodium:calcium antiporter	NA	NA	NA	NA	NA
WP_003814209.1|3401370_3401730_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041166340.1|3401813_3402755_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879617.1|3402829_3403780_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814206.1|3404073_3405168_+	porin	NA	NA	NA	NA	NA
WP_003814205.1|3405249_3406131_+	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814203.1|3406152_3406992_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_010931459.1|3407067_3408585_+|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_010931458.1|3408681_3409782_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931457.1|3409798_3410221_-	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_003814195.1|3410243_3410456_-	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931456.1|3410502_3411423_-	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_010931455.1|3411605_3412355_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_003814188.1|3412357_3412687_+	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_010931454.1|3412893_3414327_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	1.5e-52
WP_003814185.1|3414338_3414722_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_010931453.1|3414783_3415584_+	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_005015810.1|3415682_3416633_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
