The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP011197	Bordetella pertussis strain H812 chromosome, complete genome	4106501	27282	70036	4106501	tRNA,transposase	Synechococcus_phage(50.0%)	42	NA	NA
WP_010930363.1|27282_28233_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995007.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929578.1|28674_29109_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247164.1|29141_30359_-	thiolase family protein	NA	NA	NA	NA	NA
WP_010929580.1|30364_30862_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_019247165.1|31069_32005_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929582.1|32214_33006_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929583.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010929584.1|34625_35576_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814398.1|35572_36763_-	MFS transporter	NA	NA	NA	NA	NA
WP_010929585.1|37012_37924_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010929586.1|37925_40064_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003814404.1|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|41318_42212_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247766.1|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|42687_43218_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_023852754.1|43346_43646_-	DUF1974 domain-containing protein	NA	NA	NA	NA	NA
WP_010929588.1|43663_44614_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929589.1|45200_45749_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|45720_45957_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|46084_46978_+	membrane protein	NA	NA	NA	NA	NA
WP_010929590.1|48147_49395_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|49391_50006_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_010929591.1|50141_51092_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443813.1|51134_52391_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|53622_54357_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|54362_54953_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|54977_55667_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|55663_56425_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|56504_57404_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|57497_58448_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929595.1|59248_60475_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010929596.1|60474_60894_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929597.1|61077_62019_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248755.1|62442_63417_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929599.1|63473_64055_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010929600.1|64067_64370_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_029443770.1|64488_65547_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_019247832.1|65581_66853_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010929603.1|67482_68664_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929584.1|69085_70036_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP011197	Bordetella pertussis strain H812 chromosome, complete genome	4106501	232666	307010	4106501	transposase	uncultured_Mediterranean_phage(15.38%)	56	NA	NA
WP_010929591.1|232666_233617_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931563.1|233613_234804_-	voltage-gated potassium channel protein	NA	NA	NA	NA	NA
WP_010931562.1|234925_235690_-	phytanoyl-CoA dioxygenase	NA	NA	NA	NA	NA
WP_003807735.1|235776_236880_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_010931561.1|237071_238088_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815102.1|238369_238858_+	D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase	NA	A0A1B1IUK5	uncultured_Mediterranean_phage	34.1	1.6e-17
WP_003817656.1|240201_240882_-	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	34.8	3.5e-15
WP_010931560.1|240943_241795_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_010931559.1|241791_242589_-	thiazole synthase	NA	NA	NA	NA	NA
WP_010931558.1|242692_243586_-	cobalamin-binding protein	NA	NA	NA	NA	NA
WP_010931557.1|243597_245487_-	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	30.8	7.6e-07
WP_010931556.1|245823_249597_+	methionine synthase	NA	A0A140XBC7	Dickeya_phage	50.8	8.6e-10
WP_010929591.1|249593_250544_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268689.1|250561_250738_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853374.1|250698_250839_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929826.1|250852_251545_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	41.6	6.3e-36
WP_003818232.1|251918_252419_-	SET domain-containing protein	NA	NA	NA	NA	NA
WP_023853391.1|252525_253446_+	bestrophin	NA	NA	NA	NA	NA
WP_010929823.1|253462_253939_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929822.1|254032_255883_+	biosynthetic-type acetolactate synthase large subunit	NA	E4WLQ6	Ostreococcus_tauri_virus	30.4	2.2e-59
WP_010929821.1|255938_256697_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929820.1|256724_258158_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003818225.1|258231_259011_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929819.1|259023_259857_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_020699616.1|259865_260636_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.9	8.1e-24
WP_010929818.1|260635_261700_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929817.1|261851_264479_-	DNA topoisomerase III	NA	A0A0G2YA05	Acanthamoeba_polyphaga_mimivirus	25.4	6.1e-23
WP_010929816.1|264542_267164_+	DUF4401 domain-containing protein	NA	NA	NA	NA	NA
WP_003815964.1|268091_268550_-	DUF494 domain-containing protein	NA	NA	NA	NA	NA
WP_010929815.1|268828_271072_-	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA	NA
WP_010929814.1|271268_273293_-	TRAP transporter permease	NA	NA	NA	NA	NA
WP_010929813.1|273416_274379_-	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010929812.1|274590_275730_+	DSD1 family PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_010929811.1|275752_276718_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_004565905.1|276913_278104_+	acetylornithine transaminase	NA	A0A1V0SKB7	Klosneuvirus	26.7	4.4e-21
WP_003815955.1|278117_278363_+	DUF1653 domain-containing protein	NA	NA	NA	NA	NA
WP_010929810.1|278391_280413_-	acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha	NA	NA	NA	NA	NA
WP_003815953.1|280459_282067_-	methylcrotonoyl-CoA carboxylase	NA	A0A1B2ITV7	Pike_perch_iridovirus	57.3	5.4e-22
WP_010929808.1|282167_283337_-	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_005012067.1|286218_287169_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929807.1|287192_288251_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_003818201.1|288325_288700_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|289254_290205_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929833.1|291761_292607_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929834.1|292694_293858_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010929835.1|294276_295248_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929836.1|295286_296714_-	amidase	NA	NA	NA	NA	NA
WP_023853625.1|296833_297625_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929838.1|297743_300197_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	34.8	2.3e-112
WP_010929839.1|300291_301401_-	DNA polymerase III subunit beta	NA	B4UTW9	Rhizobium_phage	32.6	1.2e-41
WP_010929554.1|301403_302813_-	chromosomal replication initiator protein DnaA	NA	NA	NA	NA	NA
WP_003816025.1|303218_303353_+	50S ribosomal protein L34	NA	NA	NA	NA	NA
WP_003816026.1|303448_303820_+	ribonuclease P protein component	NA	NA	NA	NA	NA
WP_003816027.1|303816_304089_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	52.2	7.0e-15
WP_010927254.1|304137_305829_+	membrane protein insertase YidC	NA	NA	NA	NA	NA
WP_005012067.1|306059_307010_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP011197	Bordetella pertussis strain H812 chromosome, complete genome	4106501	489374	607269	4106501	tRNA,transposase	Acinetobacter_phage(22.22%)	101	NA	NA
WP_005012067.1|489374_490325_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929956.1|490423_491374_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929957.1|492096_493371_+|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
WP_003807618.1|493457_494540_+	peptide chain release factor 1	NA	A0A0S4KWG0	Pseudomonas_phage	40.7	3.3e-07
WP_010929958.1|494550_495363_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_010929959.1|495399_495726_+	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA	NA
WP_003807624.1|495730_496291_+	UbiX family flavin prenyltransferase	NA	NA	NA	NA	NA
WP_003819054.1|496531_497524_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929960.1|497542_498538_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_023853194.1|498553_499930_+	FAD binding domain in molybdopterin dehydrogenase	NA	A0A0P0IVM8	Acinetobacter_phage	37.3	2.4e-18
WP_010929962.1|499922_502304_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_019247263.1|502320_502710_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_020699695.1|502836_503067_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|503171_504122_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929963.1|504220_505171_-	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
WP_003815183.1|505167_506040_-	RNase adapter RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
WP_010929964.1|506970_508257_+	cytochrome c	NA	NA	NA	NA	NA
WP_010929965.1|508310_509237_-	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_010929966.1|509255_509711_-	PTS transporter subunit EIIA	NA	NA	NA	NA	NA
WP_003815177.1|510562_511354_-	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
WP_003815175.1|511385_512006_-	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_010929967.1|512002_512632_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_003815172.1|512644_513253_-	HAD-IIIA family hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
WP_003815171.1|513249_514239_-	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
WP_010929968.1|514344_515559_+	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_010929969.1|517510_518461_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929970.1|519894_521181_+	membrane protein	NA	NA	NA	NA	NA
WP_010929971.1|521346_521655_+	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
WP_033446243.1|521676_522321_+	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	8.5e-11
WP_003807038.1|522361_524152_+|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
WP_010929972.1|524264_525125_+	endonuclease	NA	NA	NA	NA	NA
WP_010929973.1|525121_526327_+	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010929974.1|526323_527208_-	DMT family transporter	NA	NA	NA	NA	NA
WP_033446233.1|528724_529159_-	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
WP_014905478.1|529121_530120_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931408.1|530231_531377_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931407.1|531451_532780_+	amidase	NA	NA	NA	NA	NA
WP_003815296.1|532813_533404_-	cysteine dioxygenase	NA	NA	NA	NA	NA
WP_010931406.1|533693_534488_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019249391.1|535657_536392_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931404.1|536398_537265_-	copper resistance protein B	NA	NA	NA	NA	NA
WP_010931403.1|537272_539048_-	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
WP_029443756.1|539090_539588_-	cupredoxin family protein	NA	NA	NA	NA	NA
WP_005013747.1|539884_540835_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486105.1|540933_541884_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931400.1|542224_543175_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931399.1|545498_546647_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931398.1|546691_547315_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931397.1|547467_548460_+	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_003815313.1|548456_549194_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_003815315.1|549273_550095_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931396.1|550183_551047_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_003815317.1|551173_551410_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931395.1|553384_554419_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003817805.1|554477_555455_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931394.1|555462_556383_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_023852622.1|556379_558080_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	1.0e-15
WP_010931393.1|558082_558988_+	hydrolase	NA	NA	NA	NA	NA
WP_010931392.1|559031_560165_+	M20 family metallopeptidase	NA	NA	NA	NA	NA
WP_005012808.1|560293_561244_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931391.1|561342_563412_-	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	37.3	2.6e-101
WP_019247688.1|563454_565557_-	primosomal protein N'	NA	NA	NA	NA	NA
WP_010931389.1|565863_566940_-	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
WP_010931388.1|567015_567900_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003815341.1|568082_568505_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA	NA
WP_010931387.1|568514_569915_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA	NA
WP_003817813.1|569957_570863_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA	NA
WP_010931386.1|570961_572503_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA	NA
WP_003815348.1|572537_573077_-	F0F1 ATP synthase subunit delta	NA	NA	NA	NA	NA
WP_010931385.1|573089_573560_-	F0F1 ATP synthase subunit B	NA	NA	NA	NA	NA
WP_003815363.1|573697_573940_-	F0F1 ATP synthase subunit C	NA	NA	NA	NA	NA
WP_003815364.1|574056_574938_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA	NA
WP_003815365.1|575010_575331_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_023852617.1|576182_577133_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003815367.1|578456_579233_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931383.1|579267_581040_+	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931382.1|581041_581944_-	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_003817821.1|582068_582428_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931381.1|582459_583422_+|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_005012067.1|583520_584471_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931380.1|584483_585419_-	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_010931379.1|585478_586318_-	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931378.1|586314_587484_-	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_003815379.1|587480_588770_-	murein transglycosylase A	NA	NA	NA	NA	NA
WP_003815381.1|588812_589187_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_023852620.1|589301_590030_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_010931377.1|590037_590742_+	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_010931376.1|591005_592526_+	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_003815390.1|592581_593145_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_003817833.1|593163_594195_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_010931375.1|594191_594980_+	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_023997720.1|595155_596145_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|597901_598852_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931374.1|600074_600977_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814312.1|600978_601833_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931373.1|601879_602989_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931372.1|602999_603518_-	flavin reductase family protein	NA	NA	NA	NA	NA
WP_003814302.1|603547_604180_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_003814300.1|604251_604911_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_023852703.1|604907_606047_-	MFS transporter	NA	NA	NA	NA	NA
WP_019247745.1|606396_607269_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
>prophage 5
NZ_CP011197	Bordetella pertussis strain H812 chromosome, complete genome	4106501	611683	675516	4106501	tRNA,transposase	Pandoravirus(12.5%)	47	NA	NA
WP_010931363.1|611683_612700_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814287.1|612971_613598_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931367.1|613653_614781_-	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
WP_003814283.1|614786_620504_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
WP_003814277.1|621071_622016_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
WP_003814275.1|622204_623140_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_010931365.1|623257_624829_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247692.1|624908_626117_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_019247693.1|626614_627532_+	DMT family transporter	NA	NA	NA	NA	NA
WP_003814254.1|629892_630114_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_010929632.1|630444_631461_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814252.1|631545_631797_-	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_003814250.1|631800_632616_-	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_010931362.1|632728_633607_-	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003820957.1|633718_635482_-|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
WP_010931361.1|635597_636938_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_010927010.1|638007_639432_-	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_003814239.1|639431_640133_-	response regulator	NA	W8CYM9	Bacillus_phage	36.6	5.6e-32
WP_010930179.1|641637_642588_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994844.1|642683_643655_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931357.1|643659_644340_-	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_003814742.1|644477_644870_+	OsmC family protein	NA	NA	NA	NA	NA
WP_010931561.1|644977_645994_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814739.1|646233_647019_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931356.1|647113_648523_-	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_010927090.1|648533_649334_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931355.1|649354_650125_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_010931354.1|650167_650635_+	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_005013747.1|650631_651582_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818344.1|653530_654409_-	fatty acid desaturase	NA	NA	NA	NA	NA
WP_019247959.1|655335_658314_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931070.1|658667_659618_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931353.1|659614_660703_-	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_010931352.1|660738_661602_-	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931351.1|662741_663131_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014486103.1|663134_663917_-	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_047122778.1|663950_664736_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931349.1|665011_666151_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931348.1|666147_666939_+	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931347.1|666935_667685_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931346.1|667681_668554_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_004566224.1|668553_669555_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003808195.1|669551_670715_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003808193.1|670740_671424_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247312.1|671377_672712_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931344.1|672704_673799_+	CoA transferase	NA	NA	NA	NA	NA
WP_005012067.1|674565_675516_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
NZ_CP011197	Bordetella pertussis strain H812 chromosome, complete genome	4106501	694427	771736	4106501	tRNA,integrase,protease,transposase	Bacillus_phage(20.0%)	59	741564:741582	761452:761470
WP_023995489.1|694427_695378_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931335.1|695476_696952_-	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931334.1|698539_699427_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931333.1|699429_700371_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931332.1|700416_701982_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931331.1|703759_705085_-	aspartate aminotransferase family protein	NA	NA	NA	NA	NA
WP_010931330.1|705267_706725_+	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	21.1	7.6e-15
WP_003816386.1|706688_707186_-	dihydrofolate reductase	NA	A0A140HLG8	Bacillus_phage	38.9	3.0e-24
WP_010931328.1|707216_708188_-	thymidylate synthase	NA	J7KKN7	Erwinia_phage	33.3	4.8e-50
WP_023994724.1|708240_708672_-	OsmC family protein	NA	NA	NA	NA	NA
WP_010931327.1|708801_709470_+	2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase	NA	NA	NA	NA	NA
WP_003808448.1|710198_711302_+	glycosyl transferase	NA	NA	NA	NA	NA
WP_010931326.1|711407_712682_+	Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB	NA	NA	NA	NA	NA
WP_010930472.1|712693_713719_+	Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC	NA	A0A2K9L4U8	Tupanvirus	44.2	4.7e-72
WP_010931325.1|713720_715091_+	membrane protein	NA	NA	NA	NA	NA
WP_010931324.1|715091_716228_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010931323.1|716274_718200_+	asparagine synthase (glutamine-hydrolyzing)	NA	A0A2K9R7N5	Dishui_lake_phycodnavirus	29.0	1.0e-27
WP_010931322.1|718196_719318_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010931321.1|719314_720469_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_010931320.1|720465_721596_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_003808462.1|721603_723169_-	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_010931319.1|723175_724558_-	phosphomannomutase/phosphoglucomutase	NA	A0A127AWJ1	Bacillus_phage	31.6	6.2e-51
WP_003808465.1|724836_725448_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931317.1|725539_726955_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_003818936.1|726972_727683_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_010931316.1|727679_729002_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_010931315.1|729081_731043_+	sulfatase-like hydrolase/transferase	NA	NA	NA	NA	NA
WP_003818932.1|731168_732482_-	fumarylacetoacetase	NA	NA	NA	NA	NA
WP_003818930.1|732590_733889_-	homogentisate 1,2-dioxygenase	NA	NA	NA	NA	NA
WP_010931314.1|734071_734980_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003808487.1|734989_735199_-	DUF2783 domain-containing protein	NA	NA	NA	NA	NA
WP_003808489.1|735210_736890_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931313.1|736991_737945_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010925978.1|738035_738863_-	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	NA	NA	NA	NA
WP_010931312.1|738861_740748_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_003818921.1|740744_741344_+	lipoprotein localization protein LolB	NA	NA	NA	NA	NA
WP_010931311.1|741392_742292_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
741564:741582	attL	CTGCCTGGCGTGGCCGAGT	NA	NA	NA	NA
WP_010931310.1|742500_743451_+	ribose-phosphate pyrophosphokinase	NA	A0A2K9L8D8	Tupanvirus	35.5	7.3e-43
WP_029443719.1|743573_744188_+	50S ribosomal protein L25/general stress protein Ctc	NA	NA	NA	NA	NA
WP_010931308.1|744316_744913_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931307.1|744909_745692_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_010931306.1|745764_746856_+	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_010931305.1|747135_748263_+|integrase	site-specific integrase	integrase	A0A1B0VMI6	Pseudomonas_phage	33.6	1.4e-48
WP_010931304.1|748604_749651_+	Fic family protein	NA	NA	NA	NA	NA
WP_019247951.1|750161_752918_+	DEAD/DEAH box helicase family protein	NA	NA	NA	NA	NA
WP_023994585.1|752919_755871_+	DNA methylase	NA	G8I4P9	Mycobacterium_phage	25.1	2.9e-21
WP_010931301.1|755886_757098_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_076879586.1|757094_757295_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931070.1|757281_758232_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_077274087.1|758248_758743_+	DUF4276 family protein	NA	NA	NA	NA	NA
WP_019247740.1|758746_759004_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019248455.1|759547_760459_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_029443992.1|760540_760825_+	ATP-dependent helicase	NA	A0A1V0SIN4	Klosneuvirus	34.1	6.8e-05
WP_005012067.1|761608_762559_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
761452:761470	attR	ACTCGGCCACGCCAGGCAG	NA	NA	NA	NA
WP_019247178.1|762977_765542_-	autotransporter domain-containing protein	NA	NA	NA	NA	NA
WP_019247179.1|765586_767440_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014905963.1|767772_769344_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_162291319.1|770612_770768_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|770785_771736_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 8
NZ_CP011197	Bordetella pertussis strain H812 chromosome, complete genome	4106501	1027075	1120063	4106501	transposase	Bacillus_virus(30.0%)	86	NA	NA
WP_005012067.1|1027075_1028026_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486100.1|1028128_1028791_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019249309.1|1028885_1029056_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247599.1|1029408_1030410_+	amidase	NA	NA	NA	NA	NA
WP_003818702.1|1030412_1031609_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486098.1|1031629_1032433_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_019247598.1|1032513_1032810_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247597.1|1032840_1033404_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014486097.1|1033444_1034302_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003818698.1|1034309_1035059_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.5	6.2e-29
WP_014486096.1|1035080_1035953_+	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_014486095.1|1035981_1036761_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486094.1|1036794_1037592_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003808978.1|1040246_1040639_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486091.1|1040632_1041493_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003818691.1|1041496_1042459_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_014486089.1|1043235_1043925_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.8	4.8e-12
WP_010930208.1|1044785_1045736_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931181.1|1046085_1046955_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010926062.1|1047025_1047721_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_010931179.1|1047710_1048220_+	nucleoside deaminase	NA	NA	NA	NA	NA
WP_010931178.1|1048216_1049437_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931177.1|1049384_1050287_-	transcriptional regulator GcvA	NA	NA	NA	NA	NA
WP_023997744.1|1051173_1052460_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931176.1|1052498_1053872_+	amidase	NA	NA	NA	NA	NA
WP_010931175.1|1053910_1054612_-	riboflavin synthase	NA	NA	NA	NA	NA
WP_010931174.1|1054910_1055900_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003809010.1|1056000_1056462_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931173.1|1056477_1057026_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931172.1|1057167_1058643_-	acyl--CoA ligase	NA	Q75ZG1	Hepacivirus	25.6	3.0e-35
WP_010931171.1|1058748_1059840_+	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
WP_010931170.1|1059843_1060626_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931169.1|1060635_1061424_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.0	1.1e-33
WP_010931168.1|1062549_1062984_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_010931167.1|1062980_1063991_-	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_003809025.1|1064034_1064961_-	VOC family protein	NA	NA	NA	NA	NA
WP_003809026.1|1065247_1065616_+	DUF861 domain-containing protein	NA	NA	NA	NA	NA
WP_154698394.1|1065668_1065815_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853143.1|1065832_1066783_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931165.1|1066827_1069254_+	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	33.8	1.2e-86
WP_010931164.1|1069302_1069995_+	HD domain-containing protein	NA	A0A1D6Y7U0	Golden_Marseillevirus	29.9	4.7e-07
WP_010931163.1|1070067_1071267_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_003819549.1|1071284_1072190_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931162.1|1072305_1073235_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010931161.1|1073260_1074607_+	MFS transporter	NA	NA	NA	NA	NA
WP_019247888.1|1074619_1075384_+	SDR family oxidoreductase	NA	A0A0M4JSW6	Mollivirus	26.5	3.1e-12
WP_010931159.1|1075397_1076180_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_005012067.1|1076372_1077323_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931158.1|1077384_1078494_-	porin	NA	NA	NA	NA	NA
WP_003815281.1|1079006_1079843_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
WP_010931157.1|1079969_1080878_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|1080874_1081825_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023998107.1|1081842_1082013_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247492.1|1082210_1082753_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1083788_1084739_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247402.1|1084980_1085349_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019248356.1|1085394_1086519_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003820818.1|1087653_1088394_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931155.1|1088497_1089118_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852714.1|1089221_1090172_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931154.1|1090168_1092277_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003820814.1|1092421_1093081_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_003820813.1|1093112_1093577_-	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_019248355.1|1093852_1094038_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931153.1|1094089_1094842_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931152.1|1094848_1096111_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_023852748.1|1096152_1097391_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820806.1|1098468_1099596_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_003814524.1|1099606_1100434_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_010931150.1|1100420_1101287_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010931149.1|1102653_1103058_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446288.1|1103420_1104332_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003820799.1|1104346_1105057_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931147.1|1105053_1106298_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003820797.1|1106299_1106734_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_003814535.1|1106762_1107068_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_005012067.1|1107166_1108117_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994659.1|1108173_1109322_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_010930176.1|1109402_1110353_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931144.1|1110884_1111682_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247918.1|1111729_1112383_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003814544.1|1112339_1113428_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_003814547.1|1113592_1115818_-	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_023852715.1|1118095_1118992_+	inositol monophosphatase	NA	NA	NA	NA	NA
WP_162268686.1|1118945_1119095_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1119112_1120063_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP011197	Bordetella pertussis strain H812 chromosome, complete genome	4106501	1150449	1221421	4106501	protease,transposase	uncultured_Mediterranean_phage(25.0%)	53	NA	NA
WP_005012808.1|1150449_1151400_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931130.1|1151456_1152569_+	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_005012067.1|1154952_1155903_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931129.1|1156493_1157270_+	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_003812908.1|1157387_1157651_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931128.1|1157751_1158756_-	DUF4880 domain-containing protein	NA	NA	NA	NA	NA
WP_010931127.1|1158956_1160558_-	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931126.1|1160583_1161342_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931125.1|1161433_1162090_-	adenylate kinase	NA	NA	NA	NA	NA
WP_010931124.1|1162180_1162945_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003812895.1|1162954_1163143_-	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931123.1|1163198_1164242_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_010931122.1|1164238_1164652_-	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_003812889.1|1164648_1165269_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_005012067.1|1165549_1166500_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931120.1|1166667_1168059_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_010931119.1|1168131_1168710_+	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_019247560.1|1168826_1170224_+	chloride channel protein	NA	NA	NA	NA	NA
WP_010931117.1|1170339_1171545_+	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_003820399.1|1171644_1172163_-	hypothetical protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_003812875.1|1172257_1172503_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820400.1|1172730_1173045_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_023853340.1|1173143_1178324_+	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_010931115.1|1178320_1180489_+	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_010931114.1|1180544_1182860_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.1e-164
WP_003820402.1|1182864_1184184_+	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_014905522.1|1184202_1185876_+	MCE family protein	NA	NA	NA	NA	NA
WP_010931111.1|1185880_1186549_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_010931110.1|1186705_1190527_+	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_154698391.1|1190681_1190840_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930800.1|1190857_1191808_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812857.1|1191829_1192975_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|1193123_1194053_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812851.1|1194049_1195138_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_010931109.1|1195134_1195938_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812846.1|1195934_1196666_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931108.1|1196723_1198013_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931107.1|1198109_1198712_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812839.1|1203266_1203605_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931105.1|1204312_1204579_+	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_005012067.1|1206285_1207236_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931103.1|1207232_1208564_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931102.1|1209824_1211825_+	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_003819722.1|1211817_1212459_+	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_003809276.1|1212455_1212863_+	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_010931101.1|1212859_1213660_+	SURF1 family protein	NA	NA	NA	NA	NA
WP_010931100.1|1213734_1214439_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931099.1|1214470_1215265_+	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_005013747.1|1215261_1216212_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995489.1|1216310_1217261_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812014.1|1217359_1217794_-	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_010931098.1|1217876_1220213_+	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.8	3.2e-124
WP_010930525.1|1220404_1221421_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP011197	Bordetella pertussis strain H812 chromosome, complete genome	4106501	1268815	1349690	4106501	tRNA,transposase	Bacillus_virus(25.0%)	59	NA	NA
WP_010927663.1|1268815_1269766_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931070.1|1269762_1270713_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931069.1|1270973_1272002_-	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010931068.1|1272081_1273380_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_003816847.1|1273376_1273958_-	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010931067.1|1274270_1278317_+	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
WP_010931066.1|1278557_1286219_+	filamentous hemagglutinin N-terminal domain-containing protein	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
WP_005012067.1|1286215_1287166_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931065.1|1288305_1288779_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931064.1|1288918_1289539_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931063.1|1289674_1290475_+	aldolase	NA	NA	NA	NA	NA
WP_003810897.1|1290529_1291621_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931062.1|1291642_1292086_-	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_010931061.1|1292114_1292747_-	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA	NA
WP_003810909.1|1292857_1293274_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931060.1|1293266_1293959_+	DUF2238 domain-containing protein	NA	NA	NA	NA	NA
WP_010931059.1|1294065_1294440_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931058.1|1294516_1295326_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931057.1|1295421_1296366_+	dihydrodipicolinate synthase family protein	NA	NA	NA	NA	NA
WP_003816577.1|1296404_1297376_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003810921.1|1297466_1297904_-	carboxypeptidase regulatory-like domain-containing protein	NA	NA	NA	NA	NA
WP_029443733.1|1297962_1298844_-	NRDE family protein	NA	NA	NA	NA	NA
WP_010931054.1|1299847_1300708_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010931053.1|1300740_1302123_+	FAD-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	28.4	7.9e-30
WP_010931052.1|1302119_1303139_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247407.1|1303511_1304006_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931051.1|1304013_1304754_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931050.1|1304834_1306439_-	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA	NA
WP_010931049.1|1306478_1307267_-	DeoR family transcriptional regulator	NA	A0A077SK06	Escherichia_phage	30.4	2.0e-22
WP_023995127.1|1307392_1309558_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.1	1.9e-14
WP_010931047.1|1310438_1311251_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_004568502.1|1311263_1311572_+	DUF2160 domain-containing protein	NA	NA	NA	NA	NA
WP_010931046.1|1311689_1313420_+	carbohydrate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931045.1|1313421_1314624_-	lipoprotein	NA	NA	NA	NA	NA
WP_010931044.1|1314696_1315365_-	DUF502 domain-containing protein	NA	NA	NA	NA	NA
WP_003810957.1|1315486_1315954_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_019247521.1|1316089_1317472_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_014486086.1|1317468_1318593_+	DNA repair exonuclease	NA	NA	NA	NA	NA
WP_010931042.1|1318589_1321226_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010931070.1|1321641_1322592_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931041.1|1326338_1326950_-	DUF2239 family protein	NA	NA	NA	NA	NA
WP_003812368.1|1327172_1328633_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.3	1.6e-97
WP_010931040.1|1328729_1330322_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	33.3	1.0e-17
WP_019247974.1|1330675_1330933_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003816876.1|1330934_1332275_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010931038.1|1332370_1333060_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247976.1|1333072_1334503_+	MFS transporter	NA	NA	NA	NA	NA
WP_014905903.1|1336227_1337049_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931036.1|1337059_1338631_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010931035.1|1338659_1339637_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931034.1|1339663_1340467_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.2	2.7e-30
WP_010931033.1|1340463_1341258_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003816890.1|1341265_1342501_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_019247978.1|1342514_1342928_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|1343677_1344628_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931031.1|1345249_1346977_-	sulfate permease	NA	NA	NA	NA	NA
WP_010931030.1|1347088_1348447_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_023853289.1|1348503_1348722_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1348739_1349690_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_CP011197	Bordetella pertussis strain H812 chromosome, complete genome	4106501	1469081	1521234	4106501	tRNA,transposase	Salmonella_phage(25.0%)	45	NA	NA
WP_005013747.1|1469081_1470032_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023999730.1|1470049_1470202_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814065.1|1470198_1470552_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814063.1|1470564_1470927_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814061.1|1470968_1471394_-	DUF1841 family protein	NA	NA	NA	NA	NA
WP_003814059.1|1471596_1472853_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	64.8	1.2e-11
WP_003814057.1|1473051_1474032_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005015028.1|1474181_1475423_+	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1475521_1476472_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814052.1|1476480_1477176_-	two-component system response regulator KdpE	NA	NA	NA	NA	NA
WP_003814050.1|1479997_1480597_-	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
WP_010930950.1|1480607_1482773_-	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	27.1	1.2e-24
WP_010930949.1|1482796_1484581_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA	NA
WP_017685545.1|1484580_1484670_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_003814042.1|1485364_1485637_+	DUF4212 domain-containing protein	NA	NA	NA	NA	NA
WP_003814040.1|1485636_1487703_+	cation acetate symporter	NA	NA	NA	NA	NA
WP_010929577.1|1487699_1488650_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|1488748_1489699_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005015014.1|1489814_1490147_-	multidrug transporter	NA	NA	NA	NA	NA
WP_010929073.1|1490143_1490830_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930948.1|1490816_1491776_-	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
WP_010930947.1|1491808_1494178_+	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
WP_010930946.1|1494177_1494810_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_010930945.1|1494911_1496252_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
WP_010930944.1|1496298_1497654_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
WP_005014990.1|1497944_1498181_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814024.1|1498368_1498686_-	virulence factor	NA	NA	NA	NA	NA
WP_003814023.1|1498958_1499474_-	hypothetical protein	NA	T1SAR8	Salmonella_phage	44.6	5.1e-06
WP_003814021.1|1499744_1500500_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_019247690.1|1500838_1501045_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814020.1|1501052_1501712_-	NAAT family transporter	NA	NA	NA	NA	NA
WP_010930941.1|1502006_1504211_-	TonB-dependent alcaligin siderophore receptor FauA	NA	NA	NA	NA	NA
WP_010930940.1|1504321_1505545_-	alcaligin siderophore export MFS transporter Bcr	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
WP_003814017.1|1505667_1506642_-	alcaligin siderophore biosynthesis transcriptional regulator AlcR	NA	NA	NA	NA	NA
WP_005013753.1|1506709_1507903_-	alcaligin siderophore biosynthesis protein AlcE	NA	NA	NA	NA	NA
WP_003814016.1|1507917_1508718_-	alcaligin siderophore biosynthesis protein AlcD	NA	NA	NA	NA	NA
WP_010930939.1|1508714_1510571_-	alcaligin siderophore biosynthesis protein AlcC	NA	NA	NA	NA	NA
WP_003814014.1|1510567_1511173_-	alcaligin siderophore biosynthesis protein AlcB	NA	NA	NA	NA	NA
WP_003814013.1|1511191_1512577_-	alcaligin siderophore biosynthesis protein AlcA	NA	NA	NA	NA	NA
WP_003814012.1|1513302_1514529_+	transporter	NA	NA	NA	NA	NA
WP_003814011.1|1514617_1515400_+	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|1515498_1516449_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814010.1|1516475_1517249_+	peroxide stress protein YaaA	NA	NA	NA	NA	NA
WP_003814009.1|1517260_1518502_+	MFS transporter	NA	NA	NA	NA	NA
WP_076879548.1|1520283_1521234_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_CP011197	Bordetella pertussis strain H812 chromosome, complete genome	4106501	1565159	1633245	4106501	tRNA,transposase	Streptococcus_virus(11.11%)	57	NA	NA
WP_010930416.1|1565159_1565648_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_019248504.1|1565765_1566344_+	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010930418.1|1566449_1566818_+	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|1566916_1567867_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994932.1|1567873_1568986_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
WP_010930419.1|1569672_1570875_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930420.1|1571078_1573739_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930421.1|1573751_1577156_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_023995689.1|1577823_1580049_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.5	1.2e-43
WP_010930423.1|1580095_1580422_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_010930424.1|1580472_1581081_+	recombination protein RecR	NA	NA	NA	NA	NA
WP_005013747.1|1581179_1582130_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930425.1|1582199_1582964_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446226.1|1582960_1583497_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930427.1|1583663_1584515_-	membrane protein	NA	A0A1I9SA48	Rhodococcus_phage	35.3	7.0e-37
WP_010928449.1|1584574_1585201_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
WP_005012067.1|1585197_1586148_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019249265.1|1586246_1587359_-	DUF1513 domain-containing protein	NA	NA	NA	NA	NA
WP_019248041.1|1587348_1588350_-	imelysin family protein	NA	NA	NA	NA	NA
WP_019247498.1|1588455_1589967_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_023853587.1|1589963_1591268_-	imelysin	NA	NA	NA	NA	NA
WP_010930431.1|1591379_1591940_-	membrane protein	NA	NA	NA	NA	NA
WP_010930432.1|1592207_1592762_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	32.0	1.7e-15
WP_010930433.1|1593217_1593433_-	dodecin domain-containing protein	NA	NA	NA	NA	NA
WP_033446228.1|1593687_1596285_+	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	22.6	1.5e-21
WP_010930435.1|1596281_1597469_+	cupin	NA	NA	NA	NA	NA
WP_010930436.1|1598127_1598742_+	serotype 3 fimbrial subunit	NA	NA	NA	NA	NA
WP_023994740.1|1598830_1599952_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA	NA
WP_033446216.1|1599969_1600875_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_005012067.1|1601767_1602718_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930439.1|1602899_1603652_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
WP_003811112.1|1603720_1604380_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
WP_003811113.1|1604376_1605105_+	glutamine ABC transporter ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	39.3	3.3e-35
WP_010930440.1|1605117_1607397_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	32.1	5.9e-06
WP_010930441.1|1607421_1607625_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_010930442.1|1607666_1608299_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	33.9	2.4e-13
WP_010930443.1|1608434_1609352_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_010930444.1|1609348_1610062_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_003811135.1|1610299_1611070_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003811137.1|1611074_1611674_-	C40 family peptidase	NA	A0A0A8WF62	Clostridium_phage	41.6	1.4e-20
WP_003811138.1|1611918_1613409_+	AMP nucleosidase	NA	NA	NA	NA	NA
WP_010926696.1|1613467_1613752_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003811148.1|1614317_1615244_-	YicC family protein	NA	NA	NA	NA	NA
WP_003811149.1|1615380_1616121_+	ribonuclease PH	NA	NA	NA	NA	NA
WP_010930446.1|1616287_1617664_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003811152.1|1617845_1618751_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930448.1|1620402_1622205_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_003811159.1|1622322_1622973_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA	NA
WP_005012808.1|1623071_1624022_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930450.1|1624043_1625264_+	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
WP_003811164.1|1625449_1626862_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_003811167.1|1626925_1627993_+	PAS domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
WP_010930451.1|1627992_1629480_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
WP_010930452.1|1629489_1630434_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811176.1|1630593_1631292_+	pirin family protein	NA	NA	NA	NA	NA
WP_010930453.1|1631369_1632275_+	pirin family protein	NA	NA	NA	NA	NA
WP_005012067.1|1632294_1633245_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP011197	Bordetella pertussis strain H812 chromosome, complete genome	4106501	1669194	1724785	4106501	transposase	Brazilian_cedratvirus(25.0%)	47	NA	NA
WP_005013747.1|1669194_1670145_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930486.1|1670203_1670977_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486074.1|1670969_1672526_+	LTA synthase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1672522_1673473_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810741.1|1674799_1675402_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810743.1|1675641_1676343_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003816696.1|1676336_1677119_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_005012808.1|1677303_1678254_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930483.1|1678352_1679090_-	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_010926609.1|1679279_1680038_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930482.1|1680084_1681074_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930481.1|1681251_1682220_-	transporter	NA	NA	NA	NA	NA
WP_010930480.1|1683759_1684728_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930479.1|1684736_1685678_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|1686151_1687162_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930477.1|1687152_1688667_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930476.1|1688663_1690010_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930475.1|1690012_1691047_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_023852967.1|1691096_1692722_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_005012067.1|1693274_1694225_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930487.1|1694329_1695277_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247865.1|1695330_1697145_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_010930489.1|1697137_1697812_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_023995112.1|1697941_1701016_+	autotransporter SphB2	NA	NA	NA	NA	NA
WP_019247905.1|1701029_1701329_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930492.1|1701643_1702267_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_010930493.1|1702510_1703380_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010930494.1|1703357_1704302_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247909.1|1704387_1705314_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247910.1|1705426_1706206_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930497.1|1706196_1707393_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010930498.1|1707423_1708374_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_010930499.1|1708595_1709285_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930500.1|1709349_1710105_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930501.1|1710156_1711149_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930502.1|1711158_1712112_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811538.1|1712227_1713190_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019249376.1|1714591_1715020_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1715016_1715967_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930503.1|1716260_1716983_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_010930504.1|1717421_1718609_-	MFS transporter	NA	NA	NA	NA	NA
WP_010930505.1|1718612_1718963_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930506.1|1720712_1721684_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930507.1|1721697_1722411_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930508.1|1722415_1723333_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811452.1|1723439_1723736_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929588.1|1723834_1724785_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP011197	Bordetella pertussis strain H812 chromosome, complete genome	4106501	1929218	2000736	4106501	protease,transposase	Faecalibacterium_phage(12.5%)	59	NA	NA
WP_005012067.1|1929218_1930169_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930697.1|1930250_1930799_-	OmpA family protein	NA	NA	NA	NA	NA
WP_010930698.1|1930801_1931140_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930699.1|1931535_1934127_-	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	NA	NA	NA	NA	NA
WP_029443737.1|1934193_1934937_+	3'-5' exonuclease	NA	A0A2K9V2V7	Faecalibacterium_phage	31.8	4.3e-06
WP_003810206.1|1934949_1935336_+	nucleotide pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_003810207.1|1935342_1935633_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_010930701.1|1935768_1936068_+	YciI family protein	NA	NA	NA	NA	NA
WP_010930702.1|1936136_1937039_+	EamA family transporter	NA	NA	NA	NA	NA
WP_010930703.1|1937042_1937813_+	anion permease	NA	NA	NA	NA	NA
WP_019248436.1|1938198_1938648_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|1938715_1939666_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853556.1|1939652_1939883_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926318.1|1940027_1940939_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023853568.1|1941164_1942682_+	succinate CoA transferase	NA	NA	NA	NA	NA
WP_010930705.1|1943913_1944876_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019248843.1|1944964_1945213_+	DUF1127 domain-containing protein	NA	NA	NA	NA	NA
WP_010930866.1|1951791_1954539_+	autotransporter Vag8	NA	NA	NA	NA	NA
WP_010930865.1|1954559_1955183_-	septum formation inhibitor Maf	NA	NA	NA	NA	NA
WP_003813199.1|1955194_1955665_-	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
WP_003813196.1|1955676_1956063_-	ribosome silencing factor	NA	NA	NA	NA	NA
WP_010930864.1|1956124_1956718_-	nicotinate (nicotinamide) nucleotide adenylyltransferase	NA	NA	NA	NA	NA
WP_010930863.1|1956708_1957620_-	oxygen-dependent coproporphyrinogen oxidase	NA	NA	NA	NA	NA
WP_023853662.1|1957635_1958946_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_010930861.1|1959043_1959775_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_023853666.1|1959929_1961450_+	DUF853 domain-containing protein	NA	A0A248XCZ8	Klebsiella_phage	44.9	1.7e-78
WP_010930859.1|1961510_1962866_+	sodium:alanine symporter family protein	NA	NA	NA	NA	NA
WP_076879554.1|1962900_1964226_-	aspartate aminotransferase family protein	NA	A0A1C9EHH3	Mycobacterium_phage	22.5	1.8e-07
WP_010930857.1|1964407_1965340_+	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA	NA
WP_010930856.1|1965350_1966844_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930855.1|1966840_1967764_-	DMT family transporter	NA	NA	NA	NA	NA
WP_010930854.1|1967766_1969029_-	Zn-dependent hydrolase	NA	NA	NA	NA	NA
WP_047122810.1|1969048_1970062_-	histone deacetylase family protein	NA	A0A2K9L4C2	Tupanvirus	35.2	1.7e-42
WP_010930852.1|1970134_1970425_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010930851.1|1970454_1971729_-	4-aminobutyrate--2-oxoglutarate transaminase	NA	A0A1V0SKB7	Klosneuvirus	27.9	1.6e-24
WP_162268683.1|1971710_1971854_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1971871_1972822_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930850.1|1972818_1974456_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	3.6e-21
WP_003813165.1|1974460_1975300_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_023997180.1|1975296_1976304_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930848.1|1976420_1977995_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930847.1|1978414_1979959_+	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	25.4	3.1e-14
WP_010930846.1|1980063_1981131_+	tartrate dehydrogenase	NA	NA	NA	NA	NA
WP_010930845.1|1981149_1982736_-	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_010930844.1|1982732_1983923_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_003813149.1|1985495_1985984_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813147.1|1986043_1986901_-	DMT family transporter	NA	NA	NA	NA	NA
WP_010930843.1|1986963_1987914_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010930842.1|1987976_1988966_+	quinone oxidoreductase	NA	NA	NA	NA	NA
WP_003813142.1|1989040_1989922_-|protease	protease HtpX	protease	NA	NA	NA	NA
WP_010930841.1|1990979_1991831_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_010930840.1|1991847_1992417_-	phosphohydrolase	NA	NA	NA	NA	NA
WP_010930839.1|1992447_1993311_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930838.1|1993470_1994547_+	putative 2-aminoethylphosphonate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.8	1.2e-28
WP_029443740.1|1994611_1996309_+	putative 2-aminoethylphosphonate ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_003820286.1|1996325_1997156_+	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA	NA
WP_010930836.1|1997184_1998207_+	putative 2-aminoethylphosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012067.1|1998736_1999687_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929591.1|1999785_2000736_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP011197	Bordetella pertussis strain H812 chromosome, complete genome	4106501	2047053	2095068	4106501	tRNA,transposase	Moraxella_phage(18.18%)	42	NA	NA
WP_010930522.1|2047053_2048004_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930804.1|2048102_2050703_-	TRAP transporter fused permease subunit	NA	NA	NA	NA	NA
WP_003818658.1|2050809_2051814_-	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010930803.1|2051922_2053263_-	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	22.8	8.8e-18
WP_003818661.1|2053303_2054332_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930802.1|2054527_2055073_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930801.1|2055069_2055630_+	diaminobutyrate acetyltransferase	NA	NA	NA	NA	NA
WP_010930048.1|2055728_2056679_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930523.1|2056716_2057304_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	35.8	4.7e-16
WP_003811007.1|2057321_2057705_-	thioredoxin family protein	NA	V9SJ74	Achromobacter_phage	25.8	8.1e-09
WP_003811011.1|2059064_2060357_-	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	36.0	1.7e-66
WP_010930524.1|2060491_2061532_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	51.3	6.1e-91
WP_010929632.1|2061629_2062646_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_023852762.1|2062913_2063549_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_010930526.1|2063686_2064445_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.2	1.4e-68
WP_019247478.1|2064429_2065209_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.9	4.8e-32
WP_003811022.1|2065226_2066111_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A292GJG6	Xanthomonas_phage	49.5	4.6e-15
WP_019248494.1|2066107_2066887_+	3'-5' exonuclease	NA	NA	NA	NA	NA
WP_003816527.1|2066913_2067591_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930529.1|2067879_2068632_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003816525.1|2068750_2070151_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	26.5	7.3e-31
WP_003816523.1|2070174_2070573_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003811035.1|2070748_2070949_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_010930530.1|2071087_2071816_+	redoxin family protein	NA	A0A1D8KSL1	Synechococcus_phage	56.8	9.6e-43
WP_003816520.1|2071949_2073365_+	dihydrolipoyl dehydrogenase	NA	NA	NA	NA	NA
WP_003816518.1|2073368_2074232_-	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
WP_004568486.1|2074244_2074994_-	glycerophosphodiester phosphodiesterase	NA	A0A2H4PGQ5	Escherichia_phage	27.8	1.5e-14
WP_010930531.1|2075236_2077192_+	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_019247882.1|2077173_2077842_-	arylesterase	NA	NA	NA	NA	NA
WP_005012067.1|2078616_2079567_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2079665_2080616_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813572.1|2080764_2081103_-	BON domain-containing protein	NA	NA	NA	NA	NA
WP_003813570.1|2081160_2081322_-	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
WP_003813568.1|2081353_2081554_-	CsbD family protein	NA	NA	NA	NA	NA
WP_010930533.1|2081819_2084393_-	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_019247811.1|2084463_2087013_-	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_010930535.1|2089563_2090052_+	DUF1854 domain-containing protein	NA	NA	NA	NA	NA
WP_029443743.1|2090143_2091295_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_004566336.1|2091348_2092170_+	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_010930537.1|2092208_2093438_+	lytic murein transglycosylase	NA	NA	NA	NA	NA
WP_004566334.1|2093566_2094007_+	DUF937 domain-containing protein	NA	NA	NA	NA	NA
WP_005012808.1|2094117_2095068_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
NZ_CP011197	Bordetella pertussis strain H812 chromosome, complete genome	4106501	2156630	2215900	4106501	tRNA,protease,transposase	Klosneuvirus(40.0%)	51	NA	NA
WP_005013747.1|2156630_2157581_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930573.1|2157705_2158515_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010929577.1|2158715_2159666_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930574.1|2160939_2162157_+	four-carbon acid sugar kinase family protein	NA	NA	NA	NA	NA
WP_003818670.1|2163213_2164116_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930576.1|2164192_2165065_+	MOSC domain-containing protein	NA	NA	NA	NA	NA
WP_003818672.1|2165195_2165564_+	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
WP_010930577.1|2165621_2166668_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
WP_010930578.1|2166863_2168120_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_003810623.1|2168124_2169462_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_003818676.1|2169611_2170568_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247555.1|2170670_2171603_-	acyclic terpene utilization AtuA family protein	NA	NA	NA	NA	NA
WP_019247554.1|2171718_2172039_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247553.1|2172031_2172391_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930581.1|2172438_2174013_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810637.1|2174065_2175010_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930582.1|2175027_2175858_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930583.1|2175850_2177485_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	8.2e-18
WP_010930584.1|2177481_2178837_+	amidase	NA	NA	NA	NA	NA
WP_010930585.1|2179743_2181321_+	lipoprotein	NA	NA	NA	NA	NA
WP_010930586.1|2181324_2182599_+	type 4b pilus protein PilO2	NA	NA	NA	NA	NA
WP_010930587.1|2182696_2183071_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930588.1|2184786_2185920_+	general secretion pathway protein	NA	NA	NA	NA	NA
WP_003810661.1|2185957_2186563_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_010930589.1|2186559_2187378_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930590.1|2187449_2190074_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
WP_004568544.1|2190060_2190315_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_010930591.1|2190381_2190963_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926757.1|2191266_2191527_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_014905757.1|2191692_2192316_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_003816734.1|2192315_2193089_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_010930593.1|2193085_2194294_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_010930594.1|2194319_2194793_-	RidA family protein	NA	NA	NA	NA	NA
WP_010930048.1|2194866_2195817_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879566.1|2195915_2196866_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930796.1|2196964_2198314_-	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_023852900.1|2199079_2199835_+	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_010930794.1|2199927_2202810_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
WP_003810689.1|2203132_2203558_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
WP_004568542.1|2203585_2204734_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_003810693.1|2204730_2205237_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_033446257.1|2205252_2206539_+	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_033446258.1|2206588_2207884_+|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930791.1|2207885_2208524_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_023852925.1|2208529_2209687_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_003810703.1|2209713_2211069_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_010930790.1|2211072_2212143_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810707.1|2212281_2212518_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930789.1|2212605_2213712_+	GTPase HflX	NA	NA	NA	NA	NA
WP_010930788.1|2213677_2214982_+|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930787.1|2215000_2215900_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
>prophage 17
NZ_CP011197	Bordetella pertussis strain H812 chromosome, complete genome	4106501	2226140	2270463	4106501	transposase	Staphylococcus_phage(25.0%)	45	NA	NA
WP_005013747.1|2226140_2227091_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2227189_2228140_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930782.1|2228339_2229425_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_003810400.1|2229440_2230202_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930781.1|2230198_2231122_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.6	1.6e-23
WP_019248115.1|2231220_2231745_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930779.1|2231753_2232497_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_010930778.1|2232592_2232832_-	membrane protein	NA	NA	NA	NA	NA
WP_010930777.1|2232845_2232998_-	lipoprotein	NA	NA	NA	NA	NA
WP_010930776.1|2233083_2234574_-	cytochrome c oxidase accessory protein CcoG	NA	NA	NA	NA	NA
WP_010930775.1|2234665_2235604_-	cytochrome-c oxidase, cbb3-type subunit III	NA	NA	NA	NA	NA
WP_003818560.1|2235600_2235777_-	cytochrome oxidase	NA	NA	NA	NA	NA
WP_003810383.1|2235779_2236442_-	cytochrome-c oxidase, cbb3-type subunit II	NA	NA	NA	NA	NA
WP_003810379.1|2238063_2238207_-	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA	NA
WP_010930774.1|2238203_2239178_-	membrane protein	NA	NA	NA	NA	NA
WP_162268682.1|2239072_2239327_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2239344_2240295_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930773.1|2240291_2241566_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_010930772.1|2241669_2242863_+	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930771.1|2242859_2243513_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930770.1|2243509_2244946_+	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930769.1|2244933_2245293_+	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_162268681.1|2246107_2246248_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2246265_2247216_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930768.1|2248261_2250127_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930767.1|2250384_2251905_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_003816959.1|2251992_2252643_-	flavodoxin family protein	NA	NA	NA	NA	NA
WP_010930766.1|2253591_2254887_+	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_010930765.1|2254908_2255793_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930764.1|2255891_2256767_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_003816964.1|2256756_2257113_-	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
WP_010930763.1|2257243_2258218_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003812228.1|2258347_2258527_-	DUF3008 family protein	NA	NA	NA	NA	NA
WP_029443822.1|2258624_2259149_+	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_010930761.1|2259159_2259996_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816971.1|2260108_2260480_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930760.1|2260476_2261028_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_003816975.1|2261043_2262735_-	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
WP_003816977.1|2262783_2263464_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014905663.1|2263711_2264176_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930758.1|2264345_2265275_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_019247659.1|2265287_2265935_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023997035.1|2266008_2267826_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
WP_005012067.1|2267909_2268860_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|2269512_2270463_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
NZ_CP011197	Bordetella pertussis strain H812 chromosome, complete genome	4106501	2300236	2364605	4106501	transposase	Vibrio_phage(20.0%)	51	NA	NA
WP_005013747.1|2300236_2301187_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005015810.1|2301408_2302359_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852887.1|2302457_2303423_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930740.1|2303560_2304460_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930739.1|2307054_2308542_+	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_014486081.1|2308552_2309749_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_003816680.1|2309821_2311141_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010930737.1|2311137_2312013_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930736.1|2312043_2313192_-	CoA transferase	NA	NA	NA	NA	NA
WP_010930735.1|2313209_2313524_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_003816687.1|2313545_2314268_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003816690.1|2314267_2315086_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003816691.1|2315090_2315618_-	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_010930733.1|2315623_2316880_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_010930732.1|2317238_2318378_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930731.1|2318455_2319328_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930730.1|2320198_2321149_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930729.1|2321108_2321744_-	membrane protein	NA	NA	NA	NA	NA
WP_010930728.1|2322103_2323426_-	isocitrate lyase	NA	NA	NA	NA	NA
WP_010930727.1|2323744_2324566_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	4.1e-42
WP_003810356.1|2325990_2326563_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930726.1|2326602_2328432_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_010930725.1|2328394_2329453_-	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_010930724.1|2329490_2329952_-	holo-ACP synthase	NA	NA	NA	NA	NA
WP_003810344.1|2330036_2330783_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_019247651.1|2332273_2335504_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_019248531.1|2335570_2336902_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_010930721.1|2337154_2337529_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930720.1|2337631_2338810_-	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_003810329.1|2338820_2339411_-	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_003818535.1|2339521_2340328_+	TOBE domain-containing protein	NA	NA	NA	NA	NA
WP_010930719.1|2340353_2341148_-	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.7	5.1e-05
WP_010930718.1|2342148_2343123_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003818533.1|2343281_2343794_-	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	52.3	1.8e-43
WP_003818532.1|2343950_2344922_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930717.1|2346666_2347473_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010930716.1|2347469_2348771_-	malonyl-CoA decarboxylase	NA	NA	NA	NA	NA
WP_010930715.1|2348721_2349486_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930714.1|2349599_2350370_-	spermidine synthase	NA	NA	NA	NA	NA
WP_010930713.1|2350454_2351642_-	acetyl-CoA C-acyltransferase family protein	NA	NA	NA	NA	NA
WP_003818524.1|2351714_2352089_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
WP_003810308.1|2352189_2353452_-	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.8e-28
WP_003810306.1|2353448_2354306_-	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA	NA
WP_003818523.1|2354478_2355480_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|2355931_2356882_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446265.1|2358445_2359597_+	multidrug effflux MFS transporter	NA	NA	NA	NA	NA
WP_003810297.1|2359965_2360202_+	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_010930711.1|2360265_2360433_+	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_023853105.1|2360546_2362442_-	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.5	2.3e-19
WP_077069014.1|2362605_2363556_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931070.1|2363654_2364605_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
NZ_CP011197	Bordetella pertussis strain H812 chromosome, complete genome	4106501	2529066	2587310	4106501	tRNA,transposase	Planktothrix_phage(28.57%)	54	NA	NA
WP_005012067.1|2529066_2530017_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930388.1|2530496_2531153_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA	NA
WP_010930387.1|2531167_2532835_-	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_010930386.1|2532837_2533467_-	TRAP transporter small permease subunit	NA	NA	NA	NA	NA
WP_014486072.1|2533678_2534773_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930384.1|2534917_2535730_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_010930383.1|2535733_2537317_-	membrane protein	NA	NA	NA	NA	NA
WP_010930382.1|2537487_2538618_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930381.1|2538804_2539881_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_010930380.1|2539962_2540613_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_010930379.1|2540627_2542031_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
WP_004567445.1|2542314_2543133_-	solute-binding protein	NA	NA	NA	NA	NA
WP_010930378.1|2543129_2543834_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.0	2.6e-13
WP_010930377.1|2544733_2545849_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_004567447.1|2545882_2546257_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930376.1|2546279_2547437_-	formate dehydrogenase subunit gamma	NA	NA	NA	NA	NA
WP_003812666.1|2547449_2547683_-	lipoprotein	NA	NA	NA	NA	NA
WP_019247523.1|2548317_2551287_-	formate dehydrogenase subunit alpha	NA	NA	NA	NA	NA
WP_023853518.1|2551301_2551511_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248667.1|2551662_2552292_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023994978.1|2552288_2554346_-	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_010930372.1|2554402_2555083_-	DUF3306 domain-containing protein	NA	NA	NA	NA	NA
WP_003820494.1|2555079_2555640_-	DUF3305 domain-containing protein	NA	NA	NA	NA	NA
WP_004567450.1|2555646_2556744_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010930371.1|2556896_2557490_+	molybdenum cofactor guanylyltransferase MobA	NA	NA	NA	NA	NA
WP_010930370.1|2557486_2558779_+	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_003812685.1|2558792_2559335_+	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA	NA
WP_010930369.1|2559344_2560181_-	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003820487.1|2560214_2561276_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	42.8	2.9e-80
WP_019247210.1|2561317_2562370_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_019247209.1|2562385_2562688_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|2562829_2563780_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268680.1|2563797_2563962_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930368.1|2563958_2565653_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003809599.1|2565649_2566735_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	6.4e-27
WP_010930367.1|2566782_2567682_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003809593.1|2567692_2568337_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_010930366.1|2569358_2572601_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_023852833.1|2572611_2573766_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.4	3.3e-53
WP_010930364.1|2573992_2574955_+	transaldolase	NA	H6WFR1	Cyanophage	29.2	7.5e-11
WP_005013747.1|2575053_2576004_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930363.1|2576102_2577053_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930362.1|2577062_2577752_-	VIT family protein	NA	NA	NA	NA	NA
WP_003811741.1|2577811_2578249_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003811743.1|2578294_2579188_-	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003811746.1|2579235_2580408_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003811748.1|2580404_2581559_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003811750.1|2581755_2582106_-	RnfH family protein	NA	NA	NA	NA	NA
WP_003811752.1|2582095_2582530_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_010930800.1|2582546_2583497_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811754.1|2583644_2584112_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
WP_010930360.1|2584092_2585250_-	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
WP_003811759.1|2585315_2586242_-	paraslipin	NA	NA	NA	NA	NA
WP_005012067.1|2586359_2587310_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NZ_CP011197	Bordetella pertussis strain H812 chromosome, complete genome	4106501	2629588	2696088	4106501	transposase	uncultured_Caudovirales_phage(40.0%)	56	NA	NA
WP_005012067.1|2629588_2630539_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811850.1|2630908_2631481_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA	NA
WP_003811852.1|2631483_2632494_+	flagellar motor switch protein FliM	NA	NA	NA	NA	NA
WP_010930335.1|2632486_2632987_+	flagellar motor switch protein FliN	NA	NA	NA	NA	NA
WP_003811855.1|2632997_2633339_+	flagellar biosynthetic protein FliO	NA	NA	NA	NA	NA
WP_010930334.1|2633407_2634142_+	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA	NA
WP_003811859.1|2634158_2634428_+	flagellar biosynthesis protein FliQ	NA	NA	NA	NA	NA
WP_010930333.1|2634450_2635239_+	flagellar biosynthetic protein FliR	NA	NA	NA	NA	NA
WP_010929632.1|2635285_2636302_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_014486070.1|2636518_2637961_-	PAS domain-containing protein	NA	A0A1B0V854	Salmonella_phage	41.8	1.0e-35
WP_010930332.1|2638139_2639759_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	45.3	1.5e-08
WP_010930331.1|2639879_2641700_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	52.6	6.4e-11
WP_010930330.1|2641778_2643311_-	flagellar hook-associated protein 3	NA	NA	NA	NA	NA
WP_010930329.1|2643344_2644991_-	flagellar hook-associated protein FlgK	NA	NA	NA	NA	NA
WP_010930328.1|2645060_2646083_-	flagellar assembly peptidoglycan hydrolase FlgJ	NA	A0A088F6W1	Sulfitobacter_phage	31.4	1.9e-12
WP_010930327.1|2646100_2647234_-	flagellar basal body P-ring protein FlgI	NA	NA	NA	NA	NA
WP_010930326.1|2647236_2647926_-	flagellar basal body L-ring protein FlgH	NA	NA	NA	NA	NA
WP_010930325.1|2647925_2648711_-	flagellar basal-body rod protein FlgG	NA	NA	NA	NA	NA
WP_003817181.1|2648754_2649519_-	flagellar basal body rod protein FlgF	NA	NA	NA	NA	NA
WP_003817180.1|2649557_2650979_-	flagellar hook-basal body complex protein	NA	NA	NA	NA	NA
WP_010930324.1|2651044_2651749_-	flagellar basal body rod modification protein FlgD	NA	NA	NA	NA	NA
WP_003817176.1|2651796_2652216_-	flagellar basal body rod protein FlgC	NA	NA	NA	NA	NA
WP_010930323.1|2652228_2652636_-	flagellar basal body rod protein FlgB	NA	NA	NA	NA	NA
WP_010930322.1|2652819_2653530_+	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA	NA
WP_003817172.1|2653656_2653947_+	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA	NA
WP_003817170.1|2653964_2654447_+	flagellar protein FlgN	NA	NA	NA	NA	NA
WP_010930321.1|2658952_2660107_-	flagellar type III secretion system protein FlhB	NA	NA	NA	NA	NA
WP_010931363.1|2660412_2661429_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930319.1|2661675_2662464_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003812020.1|2662530_2663211_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812022.1|2663207_2663978_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.1	9.8e-30
WP_010930208.1|2664076_2665027_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811401.1|2665082_2666000_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
WP_003811400.1|2666010_2667189_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	NA	NA	NA	NA
WP_010930318.1|2667208_2668204_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811396.1|2669792_2670401_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_003811393.1|2670388_2671429_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811391.1|2671446_2672409_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811389.1|2672405_2673599_-	CoA transferase	NA	NA	NA	NA	NA
WP_010930317.1|2673595_2674393_-	citryl-CoA lyase	NA	NA	NA	NA	NA
WP_014486069.1|2674418_2675405_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930316.1|2675423_2677463_-	acetyl-CoA synthetase	NA	NA	NA	NA	NA
WP_010930315.1|2677664_2678345_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930314.1|2678358_2679270_-	CoA ester lyase	NA	NA	NA	NA	NA
WP_003811381.1|2679266_2679845_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930313.1|2679983_2680889_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930312.1|2680896_2684316_+	TM0106 family RecB-like putative nuclease	NA	NA	NA	NA	NA
WP_010930311.1|2684303_2686904_-	BP1344/BB2830 family autotransporter	NA	NA	NA	NA	NA
WP_003811375.1|2687859_2688492_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003811372.1|2688885_2689644_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003811370.1|2689640_2690843_+	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010930208.1|2691030_2691981_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930310.1|2692888_2694034_+	DUF3182 family protein	NA	NA	NA	NA	NA
WP_019247449.1|2694020_2694776_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_003811361.1|2694892_2695072_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930208.1|2695137_2696088_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
NZ_CP011197	Bordetella pertussis strain H812 chromosome, complete genome	4106501	2878491	3016970	4106501	tRNA,holin,transposase	uncultured_Mediterranean_phage(17.65%)	107	NA	NA
WP_010929956.1|2878491_2879442_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813574.1|2879540_2880422_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_003821443.1|2880499_2881879_-	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_010930218.1|2881917_2882763_-	membrane protein	NA	NA	NA	NA	NA
WP_033451623.1|2882778_2883093_-	cupredoxin domain-containing protein	NA	NA	NA	NA	NA
WP_010930217.1|2883125_2883662_-	membrane protein	NA	NA	NA	NA	NA
WP_003813585.1|2883834_2884410_-	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA	NA
WP_003813586.1|2884512_2885250_-	acetoacetyl-CoA reductase	NA	NA	NA	NA	NA
WP_010930216.1|2885317_2886955_-	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA	NA
WP_019247742.1|2887062_2887818_-	peptidoglycan editing factor PgeF	NA	NA	NA	NA	NA
WP_010930214.1|2887805_2888768_-	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_033446255.1|2888875_2889670_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_010930213.1|2889731_2891807_-	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	30.0	2.4e-75
WP_010930212.1|2891971_2894347_+	RNA-binding transcriptional accessory protein	NA	NA	NA	NA	NA
WP_010930211.1|2894427_2895783_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003813618.1|2897261_2897984_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930207.1|2898038_2899022_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|2899151_2900102_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813621.1|2900098_2901001_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930206.1|2901088_2901847_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_023853245.1|2901859_2902951_-	cell division protein ZapE	NA	NA	NA	NA	NA
WP_003813626.1|2903048_2904476_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	2.1e-41
WP_010930204.1|2904705_2905920_-	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_003813631.1|2905965_2908836_-	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_010930202.1|2911246_2911735_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930201.1|2911860_2914557_+	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA	NA
WP_010930200.1|2914711_2916994_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_010930199.1|2917158_2917791_+	fimbrial protein	NA	NA	NA	NA	NA
WP_010930198.1|2917889_2918840_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812405.1|2918886_2919441_-	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_003816844.1|2919508_2920354_-	PHP domain-containing protein	NA	NA	NA	NA	NA
WP_019248398.1|2920423_2921392_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_023853221.1|2921391_2923188_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930196.1|2925087_2929014_-	inverse autotransporter beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_010930194.1|2929749_2932980_-	autotransporter SphB3	NA	NA	NA	NA	NA
WP_010928340.1|2933261_2934089_-	TatD family hydrolase	NA	NA	NA	NA	NA
WP_003812422.1|2934122_2934818_-	lipoprotein-releasing ABC transporter ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	38.6	7.0e-35
WP_019247537.1|2934810_2936091_-	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010930192.1|2936100_2937078_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930191.1|2937059_2938760_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.3	1.3e-50
WP_010926448.1|2938862_2939966_+	peptide chain release factor 2	NA	NA	NA	NA	NA
WP_010926447.1|2939996_2940752_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930190.1|2940758_2942279_+|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
WP_010930189.1|2942321_2942624_+	membrane protein	NA	NA	NA	NA	NA
WP_003812436.1|2942620_2943253_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930188.1|2943331_2945197_-	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
WP_020699602.1|2945193_2945988_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.3	1.2e-11
WP_010930186.1|2946016_2947132_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930185.1|2948036_2948915_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930184.1|2948914_2949739_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
WP_010929591.1|2949906_2950857_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930183.1|2951069_2953919_+	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010930182.1|2953900_2954629_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_019248549.1|2954769_2956233_-	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
WP_010930180.1|2956229_2956601_-	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
WP_003812701.1|2956618_2957932_+	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_003812703.1|2957968_2958427_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_155120815.1|2958381_2958522_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2958539_2959490_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930178.1|2959486_2960500_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_003812707.1|2960639_2961626_+	homoserine kinase	NA	NA	NA	NA	NA
WP_161633091.1|2961984_2962692_-	DUF192 domain-containing protein	NA	NA	NA	NA	NA
WP_010929591.1|2963272_2964223_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809618.1|2964374_2964977_-	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_010930175.1|2964995_2965628_+	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
WP_162096758.1|2965672_2965924_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930174.1|2965865_2967752_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
WP_010930173.1|2967770_2968613_+	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
WP_003819875.1|2968609_2969968_+	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_003809629.1|2970188_2970983_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930172.1|2971213_2972707_-	exopolyphosphatase	NA	NA	NA	NA	NA
WP_010930171.1|2972942_2975024_+	polyphosphate kinase 1	NA	NA	NA	NA	NA
WP_014486066.1|2975218_2976259_+	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
WP_010930169.1|2976393_2977410_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_003809638.1|2977431_2978289_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_010930167.1|2978333_2979110_+	phosphate ABC transporter ATP-binding protein PstB	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
WP_154698393.1|2979322_2979460_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2979477_2980428_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809441.1|2980454_2980919_-	barstar family protein	NA	NA	NA	NA	NA
WP_014486065.1|2982125_2984414_-	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_010930165.1|2984530_2985403_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930164.1|2985445_2986600_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_010930163.1|2986634_2987465_-	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_023853525.1|2987548_2989093_+	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
WP_010930161.1|2989135_2989495_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003819794.1|2989496_2989910_-|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_003809432.1|2989950_2990268_-	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003809431.1|2990352_2991069_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930160.1|2991332_2992754_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_005015810.1|2995426_2996377_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_161633096.1|2996356_2996611_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853536.1|2996949_2997966_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930157.1|2998301_2998943_-	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_003809423.1|2999033_3000470_-	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_023853534.1|3000627_3001701_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_010930155.1|3001697_3002834_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
WP_003809416.1|3002978_3003323_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.4	1.0e-10
WP_010930154.1|3003389_3005270_+	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_003809411.1|3005319_3006255_+	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.5	3.0e-41
WP_010931363.1|3006587_3007604_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_015041211.1|3008541_3009969_+|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010930151.1|3009965_3010988_+	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
WP_003809396.1|3010977_3011451_+	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_010930149.1|3011591_3012479_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_014486064.1|3012475_3014119_+	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_003819773.1|3014115_3015123_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_010931363.1|3015953_3016970_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 22
NZ_CP011197	Bordetella pertussis strain H812 chromosome, complete genome	4106501	3028246	3099562	4106501	transposase	Xanthomonas_phage(14.29%)	57	NA	NA
WP_005012067.1|3028246_3029197_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809486.1|3029440_3029704_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_003819817.1|3029777_3030059_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930142.1|3030075_3030936_-	M23 family metallopeptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
WP_003809479.1|3030932_3031268_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930141.1|3031321_3031972_-	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
WP_019247197.1|3033652_3034597_-	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_003809467.1|3034642_3034960_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930139.1|3034962_3035901_-	DnaJ domain-containing protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
WP_003819814.1|3036078_3036564_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930138.1|3036582_3037131_+	diguanylate cyclase	NA	NA	NA	NA	NA
WP_023994624.1|3037162_3037315_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930137.1|3038644_3039286_+	glutathione transferase	NA	NA	NA	NA	NA
WP_010930136.1|3039440_3041789_+	DUF3141 domain-containing protein	NA	NA	NA	NA	NA
WP_003809454.1|3041785_3042724_+	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_010930135.1|3042749_3043940_+	acetate kinase	NA	NA	NA	NA	NA
WP_010930134.1|3043936_3044710_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010930133.1|3044739_3045933_-	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_010930132.1|3046050_3047061_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_010930131.1|3047078_3049115_-	transketolase	NA	NA	NA	NA	NA
WP_010930130.1|3049309_3050050_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_010929969.1|3050148_3051099_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929584.1|3051197_3052148_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003817151.1|3052190_3053366_+	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_010930129.1|3053587_3055378_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
WP_010930128.1|3055390_3057052_-	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
WP_010930127.1|3057064_3059770_-	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_003817147.1|3060062_3061817_+	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_010930126.1|3061813_3062440_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003811948.1|3062436_3063288_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
WP_010930125.1|3063417_3065478_+	M3 family metallopeptidase	NA	NA	NA	NA	NA
WP_010930124.1|3065664_3066279_+	SCO family protein	NA	NA	NA	NA	NA
WP_010930123.1|3066424_3066676_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_014486063.1|3066745_3068128_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010930121.1|3068124_3071304_-	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_029443805.1|3072111_3073029_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930119.1|3073080_3073812_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_010926548.1|3073871_3074444_+	chorismate lyase	NA	NA	NA	NA	NA
WP_010929632.1|3075952_3076969_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930118.1|3077106_3078156_-	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
WP_005012067.1|3078260_3079211_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813314.1|3079306_3080032_-	CoA pyrophosphatase	NA	NA	NA	NA	NA
WP_003813315.1|3080242_3080623_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_014905652.1|3080928_3081801_+	EamA family transporter	NA	NA	NA	NA	NA
WP_023852686.1|3081808_3082189_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023852693.1|3082342_3083617_-	PA0069 family radical SAM protein	NA	NA	NA	NA	NA
WP_010930113.1|3085104_3086013_-	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA	NA
WP_010930112.1|3086810_3087875_-	sulfate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.3	3.8e-24
WP_003821528.1|3089711_3090746_-	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003813333.1|3090935_3091577_-	peroxiredoxin	NA	NA	NA	NA	NA
WP_003821527.1|3091659_3093486_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010930111.1|3093729_3094659_-	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA	NA
WP_010930110.1|3094658_3095408_-	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
WP_003821521.1|3095479_3096394_-	histone deacetylase family protein	NA	A0A2K9KZC4	Tupanvirus	34.7	9.8e-45
WP_010930108.1|3096413_3097559_+	lytic murein transglycosylase B	NA	NA	NA	NA	NA
WP_014486062.1|3097619_3098531_-	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	38.8	8.0e-47
WP_005012067.1|3098611_3099562_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NZ_CP011197	Bordetella pertussis strain H812 chromosome, complete genome	4106501	3118984	3174114	4106501	transposase	Bacillus_phage(28.57%)	48	NA	NA
WP_005012808.1|3118984_3119935_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566317.1|3120064_3120457_+	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
WP_003821497.1|3120733_3121645_-	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
WP_010930088.1|3121769_3122744_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|3122740_3123691_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810865.1|3123789_3124875_-	DNA polymerase IV	NA	NA	NA	NA	NA
WP_010930072.1|3124972_3125383_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003810859.1|3125998_3127912_+	S9 family peptidase	NA	NA	NA	NA	NA
WP_010930071.1|3128047_3130660_+	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_019248496.1|3130661_3131396_-	serine/threonine protein phosphatase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
WP_003810851.1|3131559_3132741_+	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_003810850.1|3132737_3132950_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930069.1|3132946_3133927_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_010930068.1|3133972_3134800_-	oxidoreductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
WP_023852913.1|3134949_3136764_+	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
WP_003810840.1|3136818_3137202_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_010930066.1|3137198_3138149_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810839.1|3138261_3138513_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810837.1|3138706_3138922_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|3139018_3140137_-	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810832.1|3140256_3140469_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930064.1|3140628_3140850_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3140902_3141853_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930062.1|3143029_3144400_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_010930061.1|3144432_3145224_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930060.1|3145236_3146292_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019247557.1|3146317_3147193_-	amidohydrolase	NA	NA	NA	NA	NA
WP_023852826.1|3147298_3147547_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003819989.1|3147581_3149036_-	carboxylase	NA	NA	NA	NA	NA
WP_004568140.1|3149032_3149554_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_010930057.1|3149582_3150935_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_029444137.1|3151158_3154047_-	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010930056.1|3156191_3157493_+	phospholipase	NA	NA	NA	NA	NA
WP_010930055.1|3157507_3158224_-	flagellar brake protein	NA	NA	NA	NA	NA
WP_010930054.1|3158505_3159186_+	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_010930052.1|3159713_3160373_-	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
WP_010930051.1|3160771_3162604_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
WP_005012067.1|3162600_3163551_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814007.1|3164714_3166430_+	acetolactate synthase 3 catalytic subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.3	3.1e-60
WP_003814006.1|3166440_3166932_+	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_010930015.1|3167004_3168021_+	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_003814004.1|3168188_3168968_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_003814003.1|3168986_3169514_-	lipoprotein	NA	NA	NA	NA	NA
WP_005019401.1|3169512_3169719_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814002.1|3169807_3170077_+	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_003821234.1|3170167_3172327_+	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_003814000.1|3172447_3173167_+	lipoprotein	NA	NA	NA	NA	NA
WP_005013747.1|3173163_3174114_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
NZ_CP011197	Bordetella pertussis strain H812 chromosome, complete genome	4106501	3255174	3324177	4106501	transposase	Klosneuvirus(16.67%)	55	NA	NA
WP_041337087.1|3255174_3256125_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813068.1|3256121_3257141_-	class 1 fructose-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	35.7	1.5e-49
WP_010930049.1|3257150_3259859_-	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	24.0	2.8e-15
WP_010930050.1|3260006_3260663_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|3260761_3261712_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023998705.1|3261859_3262753_+	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_010930013.1|3262952_3264647_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_010930012.1|3264681_3265608_+	VOC family protein	NA	NA	NA	NA	NA
WP_010930011.1|3265676_3266774_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003818996.1|3266792_3267656_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.9	9.6e-34
WP_010930010.1|3267667_3268450_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_004566042.1|3268446_3269565_+	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
WP_010930009.1|3269561_3271094_+	acyl--CoA ligase	NA	NA	NA	NA	NA
WP_003818991.1|3271134_3272142_+	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_023999677.1|3272286_3273009_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930007.1|3273024_3274047_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_010930006.1|3274363_3275098_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930005.1|3275182_3276928_+	acetolactate synthase	NA	NA	NA	NA	NA
WP_010930004.1|3276924_3277677_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930003.1|3277721_3278678_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003818983.1|3278766_3279333_+	membrane protein	NA	NA	NA	NA	NA
WP_010930002.1|3279340_3280201_-	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_020699739.1|3280230_3280959_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.4	3.4e-32
WP_003807497.1|3280990_3281674_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010930000.1|3282511_3283426_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929999.1|3283490_3284399_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929998.1|3284489_3285914_-	TolC family protein	NA	NA	NA	NA	NA
WP_010929997.1|3285915_3287238_-	cyclolysin T1SS periplasmic adaptor subunit CyaD	NA	NA	NA	NA	NA
WP_010929996.1|3287234_3289373_-	cyclolysin T1SS permease/ATPase CyaB	NA	W8CYL7	Bacillus_phage	29.2	2.7e-45
WP_010929995.1|3289450_3294571_-	bifunctional adenylate cyclase toxin/hemolysin CyaA	NA	NA	NA	NA	NA
WP_153302771.1|3294671_3294980_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929994.1|3295049_3295607_+	cyclolysin-activating lysine-acyltransferase	NA	NA	NA	NA	NA
WP_010929993.1|3295622_3297104_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_023853308.1|3297158_3299012_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929992.1|3299274_3300612_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_010929991.1|3300646_3302644_-	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010929990.1|3302661_3304710_-	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010929989.1|3304840_3305707_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929988.1|3305975_3306941_-	octaprenyl diphosphate synthase	NA	NA	NA	NA	NA
WP_010929987.1|3307055_3308204_-	fumarylacetoacetate hydrolase	NA	NA	NA	NA	NA
WP_003807462.1|3308628_3308940_+	50S ribosomal protein L21	NA	NA	NA	NA	NA
WP_003807460.1|3308973_3309234_+	50S ribosomal protein L27	NA	NA	NA	NA	NA
WP_003807459.1|3309383_3310517_+	GTPase ObgE	NA	NA	NA	NA	NA
WP_003807457.1|3310587_3311724_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	44.8	5.8e-63
WP_010925762.1|3311889_3312684_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003807452.1|3312746_3313190_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|3313305_3314256_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_020699729.1|3314378_3314786_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010929984.1|3314858_3317054_+	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|3317275_3318226_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852739.1|3318185_3318710_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_003814467.1|3318841_3319813_+	FecR family protein	NA	NA	NA	NA	NA
WP_010929983.1|3319932_3322377_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_010929982.1|3322392_3322983_-	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|3323226_3324177_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 25
NZ_CP011197	Bordetella pertussis strain H812 chromosome, complete genome	4106501	3339623	3439736	4106501	tRNA,protease,transposase,terminase,tail	uncultured_Caudovirales_phage(14.29%)	108	NA	NA
WP_005012067.1|3339623_3340574_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814437.1|3341305_3341683_+	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_003814436.1|3341667_3342369_-	membrane protein	NA	NA	NA	NA	NA
WP_010931409.1|3342512_3343205_-	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_010931410.1|3343204_3344308_-	phosphotransferase	NA	NA	NA	NA	NA
WP_010931411.1|3344417_3346790_+	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931412.1|3346786_3348346_+	chaperone SurA	NA	NA	NA	NA	NA
WP_010931413.1|3348370_3349168_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931414.1|3349199_3350345_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_003814419.1|3350449_3351892_+	pyruvate kinase	NA	NA	NA	NA	NA
WP_010929184.1|3351894_3353124_-	spore maturation protein	NA	NA	NA	NA	NA
WP_005012808.1|3355261_3356212_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247922.1|3357341_3357899_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247923.1|3357874_3358225_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814657.1|3358393_3359188_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
WP_010931416.1|3359184_3360234_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003814652.1|3360233_3360923_-	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_003814650.1|3361009_3361507_-	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_010931417.1|3361538_3362855_-	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_010931418.1|3362871_3363846_-	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_003814643.1|3363882_3364341_-	protein TolR	NA	NA	NA	NA	NA
WP_003814641.1|3364340_3365021_-	protein TolQ	NA	NA	NA	NA	NA
WP_010931419.1|3365023_3365452_-	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814636.1|3365504_3367235_-|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
WP_003814635.1|3367300_3367873_+	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_010931420.1|3367853_3368540_+	response regulator	NA	NA	NA	NA	NA
WP_010931421.1|3368895_3369567_+	SOS response-associated peptidase	NA	Q5QF62	Pseudomonas_virus	39.9	4.7e-36
WP_010931422.1|3369895_3370117_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010926433.1|3370116_3370398_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931423.1|3370394_3370910_-	DUF2514 family protein	NA	NA	NA	NA	NA
WP_010931424.1|3370909_3371461_-	lysozyme	NA	NA	NA	NA	NA
WP_010931425.1|3371439_3371682_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931426.1|3371686_3372499_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926428.1|3372498_3372762_-	hypothetical protein	NA	NA	NA	NA	NA
WP_124740660.1|3372802_3373000_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931428.1|3372980_3373397_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931429.1|3373401_3377358_-	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
WP_010931430.1|3377350_3377740_-	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931431.1|3377736_3378270_-	DUF1833 family protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931432.1|3378337_3378697_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931433.1|3378706_3381319_-|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931434.1|3381344_3381635_-	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_003813412.1|3381652_3381982_-	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931435.1|3381991_3382510_-	hypothetical protein	NA	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_010931436.1|3382764_3383265_-	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931437.1|3383272_3383695_-	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_010931438.1|3383691_3384090_-	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931439.1|3384086_3384482_-	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_162096760.1|3384481_3384670_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|3384683_3385166_-	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_010931442.1|3385228_3385480_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|3386154_3387105_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931443.1|3387533_3388136_-	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_010931444.1|3388258_3388501_-	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931445.1|3388506_3389562_-	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931446.1|3389590_3391009_-	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931447.1|3391011_3392289_-|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_019247942.1|3392275_3392761_-|transposase	transposase	transposase	C7U0W1	Enterobacteria_phage	61.5	7.3e-39
WP_005012067.1|3393400_3394351_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853183.1|3394368_3394590_+	hypothetical protein	NA	NA	NA	NA	NA
WP_161633094.1|3394607_3395297_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853179.1|3395289_3395541_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_010931451.1|3396095_3396707_+	S24 family peptidase	NA	NA	NA	NA	NA
WP_019247378.1|3396778_3396985_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3397236_3398187_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248926.1|3398285_3399359_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931475.1|3399526_3400321_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010925795.1|3400360_3400885_-	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931474.1|3400877_3402620_-	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010931473.1|3402829_3403588_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931472.1|3403590_3404298_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931471.1|3404314_3405196_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_019247734.1|3405206_3405965_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_019248554.1|3405933_3406689_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931468.1|3406758_3408177_+	amidase	NA	NA	NA	NA	NA
WP_003819076.1|3408198_3408849_-	carbonic anhydrase	NA	NA	NA	NA	NA
WP_033446132.1|3408982_3409318_-	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_010930800.1|3409406_3410357_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931467.1|3410433_3412254_+	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_010931466.1|3412258_3413332_-	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_003814230.1|3413454_3414423_+	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010927008.1|3414496_3415408_+	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814226.1|3415426_3415999_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010931465.1|3416079_3416628_-	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_010931464.1|3416627_3418217_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_003814221.1|3418286_3418526_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_023995141.1|3418566_3419592_-|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814217.1|3419657_3420839_-	UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase	NA	NA	NA	NA	NA
WP_010931463.1|3420935_3421388_+	membrane protein	NA	NA	NA	NA	NA
WP_010931462.1|3421397_3422738_-	M24 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931461.1|3423054_3424092_+	sodium:calcium antiporter	NA	NA	NA	NA	NA
WP_003814209.1|3424473_3424833_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041166340.1|3424916_3425858_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879617.1|3425932_3426883_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814206.1|3427176_3428271_+	porin	NA	NA	NA	NA	NA
WP_033446149.1|3428361_3429234_+	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814203.1|3429255_3430095_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_010931459.1|3430170_3431688_+|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_010931458.1|3431784_3432885_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931457.1|3432901_3433324_-	SnoaL-like domain-containing protein	NA	NA	NA	NA	NA
WP_003814195.1|3433346_3433559_-	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931456.1|3433605_3434526_-	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_010931455.1|3434708_3435458_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_003814188.1|3435460_3435790_+	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_033446148.1|3436077_3437430_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	2.1e-51
WP_003814185.1|3437441_3437825_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_010931453.1|3437886_3438687_+	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_005015810.1|3438785_3439736_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
NZ_CP011197	Bordetella pertussis strain H812 chromosome, complete genome	4106501	3600405	3655379	4106501	transposase	Lake_Baikal_phage(20.0%)	44	NA	NA
WP_005012067.1|3600405_3601356_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929827.1|3601472_3602540_+	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_019247670.1|3602615_3605744_-	Rne/Rng family ribonuclease	NA	NA	NA	NA	NA
WP_023853155.1|3606251_3607217_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_010929830.1|3607219_3607891_+	HAD family hydrolase	NA	NA	NA	NA	NA
WP_010929831.1|3608047_3609007_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA	NA
WP_003821340.1|3609014_3609677_+	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA	NA
WP_005013747.1|3609673_3610624_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929806.1|3610745_3611999_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929805.1|3611976_3612939_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929804.1|3613070_3613565_+	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_010929803.1|3613564_3614797_+	dehydratase	NA	NA	NA	NA	NA
WP_019247316.1|3615542_3615824_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929802.1|3615810_3616797_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929801.1|3616940_3617345_+	RidA family protein	NA	NA	NA	NA	NA
WP_010929800.1|3617486_3620873_+	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010929799.1|3620903_3622367_+	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_019247315.1|3622375_3624004_+	L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010929797.1|3624089_3624749_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929796.1|3624778_3625219_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929795.1|3625729_3625933_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	58.2	5.8e-14
WP_010929794.1|3626108_3627014_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929577.1|3627112_3628063_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|3628161_3629112_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814674.1|3630893_3632087_-	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_010929793.1|3632152_3633181_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_019247419.1|3633207_3634380_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003814681.1|3634505_3635483_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814685.1|3635493_3636465_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929791.1|3636531_3637317_-	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_003814691.1|3637309_3638542_-	CoA transferase	NA	NA	NA	NA	NA
WP_003814694.1|3638737_3639493_-	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	40.8	2.9e-42
WP_010929789.1|3639603_3640122_+	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	38.9	2.1e-12
WP_010929788.1|3641910_3643311_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_003820700.1|3643410_3643755_+	TIGR01244 family phosphatase	NA	NA	NA	NA	NA
WP_003814701.1|3643843_3644314_+	universal stress protein	NA	NA	NA	NA	NA
WP_019247421.1|3644724_3645123_+	GTP-binding protein	NA	E4ZFJ7	Streptococcus_phage	44.3	9.0e-19
WP_010929577.1|3645254_3646205_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814730.1|3648649_3649384_+	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
WP_003814728.1|3649793_3649973_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814726.1|3650163_3651477_+	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929786.1|3651492_3653004_-	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010929785.1|3653000_3654206_-	sodium/glutamate symporter	NA	NA	NA	NA	NA
WP_022997984.1|3654401_3655379_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 27
NZ_CP011197	Bordetella pertussis strain H812 chromosome, complete genome	4106501	3745192	3860862	4106501	protease,tRNA,transposase	Bacillus_phage(12.5%)	100	NA	NA
WP_005013747.1|3745192_3746143_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814960.1|3746265_3746994_+	monofunctional biosynthetic peptidoglycan transglycosylase	NA	NA	NA	NA	NA
WP_010929739.1|3747090_3748269_+	LPS export ABC transporter permease LptG	NA	NA	NA	NA	NA
WP_010929738.1|3748265_3749099_+	symmetrical bis(5'-nucleosyl)-tetraphosphatase	NA	NA	NA	NA	NA
WP_010929737.1|3749135_3749876_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929736.1|3749995_3751171_-	dihydroorotase	NA	NA	NA	NA	NA
WP_003820560.1|3751167_3752121_-	aspartate carbamoyltransferase catalytic subunit	NA	A7RB08	Paramecium_bursaria_Chlorella_virus	35.8	2.5e-30
WP_010929735.1|3752134_3752536_-	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_010927118.1|3752528_3753134_-	YqgE/AlgH family protein	NA	NA	NA	NA	NA
WP_003814980.1|3753221_3753386_-	rubredoxin	NA	NA	NA	NA	NA
WP_010929734.1|3753502_3754351_+	hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_003814984.1|3754347_3755001_+	thiamine phosphate synthase	NA	NA	NA	NA	NA
WP_010929733.1|3755017_3756301_+	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA	NA
WP_010929732.1|3756540_3758166_+	DUF342 domain-containing protein	NA	NA	NA	NA	NA
WP_003814990.1|3758259_3758661_-	RidA family protein	NA	NA	NA	NA	NA
WP_003814993.1|3758685_3759120_-	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814996.1|3759121_3760771_-	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	31.2	2.6e-56
WP_010929731.1|3760811_3761981_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010929730.1|3761983_3762847_-	enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_010929729.1|3766210_3766915_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.2	1.1e-16
WP_003815010.1|3766908_3767703_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	23.5	2.6e-09
WP_003815011.1|3767699_3768665_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815013.1|3768668_3769589_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815015.1|3769685_3770849_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929728.1|3771071_3771962_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003815019.1|3771965_3772469_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929727.1|3772511_3773510_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930048.1|3773506_3774457_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_111735998.1|3774545_3774833_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|3775024_3775975_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566083.1|3776034_3776595_+	5'-3'-deoxyribonucleotidase	NA	A0A1E1EUN3	Acanthamoeba_castellanii_mimivirus	30.8	3.2e-14
WP_004566082.1|3778097_3778979_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929725.1|3779092_3780295_+	MFS transporter	NA	NA	NA	NA	NA
WP_003819105.1|3780423_3782283_-	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
WP_003819104.1|3782360_3783170_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010929724.1|3783240_3784242_+	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_003807710.1|3784273_3785134_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010929723.1|3785333_3786338_+	alpha/beta hydrolase	NA	A0A2L2DMU8	Acanthamoeba_polyphaga_mimivirus	31.5	7.5e-30
WP_003819100.1|3786334_3787921_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003807706.1|3787929_3788856_+	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA	NA
WP_003807705.1|3788878_3789505_+	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_005015810.1|3789603_3790554_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014906092.1|3790550_3791687_-|protease	trypsin-like serine protease	protease	W5SAB9	Pithovirus	31.2	1.2e-07
WP_010927226.1|3791740_3792517_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_010929721.1|3792541_3793000_-	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_003815815.1|3793139_3793781_+	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_003815816.1|3793845_3795228_+	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_010929720.1|3795253_3796102_+	cytochrome c1	NA	NA	NA	NA	NA
WP_003815819.1|3796260_3796872_+	stringent starvation protein A	NA	NA	NA	NA	NA
WP_003815821.1|3796881_3797331_+|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
WP_010929718.1|3797997_3798159_-	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_077069015.1|3798234_3798450_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3798436_3799387_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929717.1|3800430_3800709_-	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_010929716.1|3801851_3802400_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.3e-28
WP_010929715.1|3802462_3804142_-	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
WP_010929714.1|3804138_3805890_-	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
WP_003817696.1|3805886_3806012_-	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_004567834.1|3806025_3807180_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_023852659.1|3807195_3808773_-	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_010929712.1|3808898_3809444_-	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929591.1|3810003_3810954_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929711.1|3811684_3812665_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929710.1|3812678_3813803_+	CoA transferase	NA	NA	NA	NA	NA
WP_003814321.1|3813810_3815565_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_010929709.1|3815671_3816571_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814324.1|3816635_3817619_-	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
WP_010929708.1|3817754_3818735_+	AEC family transporter	NA	NA	NA	NA	NA
WP_010929707.1|3818751_3820143_-	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_010929706.1|3820294_3820831_+|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_019247543.1|3820761_3822147_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
WP_003814332.1|3822289_3822928_-	membrane protein	NA	NA	NA	NA	NA
WP_010929705.1|3823014_3824904_+	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
WP_003814337.1|3824900_3825842_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_003814339.1|3825947_3826997_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
WP_010929704.1|3827249_3827951_+	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_010929703.1|3827947_3828646_+	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_010929702.1|3828646_3830002_+	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
WP_010929701.1|3829998_3830490_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_003814351.1|3830508_3831465_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003814355.1|3832875_3834978_-	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_003814356.1|3835148_3836192_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814358.1|3836235_3836979_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814363.1|3838000_3838411_-	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA	NA
WP_010929700.1|3839360_3840158_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930742.1|3840256_3841207_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|3841203_3842154_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|3842240_3843191_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929681.1|3843305_3844307_-	HindIII family type II restriction endonuclease	NA	NA	NA	NA	NA
WP_010929682.1|3844397_3844964_-	preprotein translocase subunit SecD	NA	NA	NA	NA	NA
WP_010929683.1|3845282_3847196_+	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA	NA
WP_010929684.1|3847237_3848668_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_019247308.1|3848780_3850193_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_003818947.1|3850209_3850905_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|3851123_3852074_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929687.1|3852098_3852998_-	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_010929688.1|3853152_3853701_+	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929689.1|3853739_3854459_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_023994893.1|3854629_3857473_+	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_033455792.1|3858066_3860862_+|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
>prophage 28
NZ_CP011197	Bordetella pertussis strain H812 chromosome, complete genome	4106501	4005569	4070481	4106501	transposase	Planktothrix_phage(40.0%)	60	NA	NA
WP_039249574.1|4005569_4006055_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_153302797.1|4006143_4006281_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931647.1|4006273_4007254_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019248461.1|4007520_4008330_+	pertussis toxin ADP-ribosyltransferase subunit PtxA	NA	NA	NA	NA	NA
WP_014906114.1|4008369_4009050_+	pertussis toxin binding subunit PtxB	NA	NA	NA	NA	NA
WP_010929491.1|4009043_4009502_+	pertussis toxin subunit 4	NA	NA	NA	NA	NA
WP_023853616.1|4009513_4009876_+	pertussis toxin binding subunit PtxD	NA	NA	NA	NA	NA
WP_010931651.1|4009958_4010642_+	pertussis toxin binding subunit PtxE	NA	NA	NA	NA	NA
WP_010929493.1|4010697_4011006_+	type IV secretion system protein PtlA	NA	NA	NA	NA	NA
WP_010929494.1|4011024_4011339_+	type IV secretion system protein PtlB	NA	NA	NA	NA	NA
WP_010931652.1|4011335_4013810_+	type IV secretion system protein PtlC	NA	NA	NA	NA	NA
WP_010931653.1|4013817_4015209_+	type IV secretion system protein PtlD	NA	NA	NA	NA	NA
WP_010929497.1|4015205_4015391_+	type IV secretion system protein PtlI	NA	NA	NA	NA	NA
WP_010929498.1|4015369_4016071_+	type IV secretion system peptidoglycanase PtlE	NA	NA	NA	NA	NA
WP_010931654.1|4016067_4016889_+	type IV secretion system protein PtlF	NA	NA	NA	NA	NA
WP_010931655.1|4016869_4017994_+	type IV secretion system protein PtlG	NA	NA	NA	NA	NA
WP_010929500.1|4017986_4019006_+	type IV secretion system protein PtlH	NA	NA	NA	NA	NA
WP_010931656.1|4019211_4020102_-	DMT family transporter	NA	NA	NA	NA	NA
WP_010929501.1|4020346_4021138_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003815873.1|4021220_4021595_+	DUF1232 domain-containing protein	NA	NA	NA	NA	NA
WP_010931658.1|4021572_4022982_+	DUF2868 domain-containing protein	NA	NA	NA	NA	NA
WP_003815876.1|4022974_4024357_+	GTPase/DUF3482 domain-containing protein	NA	A0A0R6PHS5	Moraxella_phage	38.9	9.9e-57
WP_003815878.1|4024691_4026296_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931659.1|4026373_4027345_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931660.1|4027355_4028282_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931661.1|4028672_4029623_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931662.1|4029792_4031019_+	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA	NA	NA	NA	NA
WP_010931663.1|4031218_4032085_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_003815027.1|4032077_4033040_+	Nudix family hydrolase	NA	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	53.4	1.9e-06
WP_010927663.1|4033140_4034091_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|4034189_4035140_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|4035238_4036189_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994937.1|4036185_4037679_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_003815032.1|4037675_4040783_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931665.1|4040779_4043848_-	MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931666.1|4043844_4045095_-	MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_023853184.1|4045275_4046028_-	cell division protein ZapD	NA	NA	NA	NA	NA
WP_010931667.1|4046069_4046714_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_010931668.1|4046722_4047703_-	prepilin peptidase	NA	NA	NA	NA	NA
WP_003815047.1|4047802_4048546_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815049.1|4048628_4048976_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003815051.1|4049073_4049916_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_003815053.1|4049960_4050848_-	segregation/condensation protein A	NA	NA	NA	NA	NA
WP_003815055.1|4050874_4051063_-	DUF3460 family protein	NA	NA	NA	NA	NA
WP_010931669.1|4051160_4052618_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_010931670.1|4052604_4054131_+	glycerol kinase GlpK	NA	NA	NA	NA	NA
WP_003815061.1|4054149_4054617_-	membrane protein	NA	NA	NA	NA	NA
WP_010931671.1|4054616_4055639_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003815064.1|4055759_4056500_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	4.4e-35
WP_003815066.1|4056554_4057655_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815068.1|4057656_4058847_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815070.1|4058966_4059983_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	42.1	1.0e-71
WP_003815073.1|4060301_4060973_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	38.2	9.5e-29
WP_010927126.1|4060969_4061878_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_010931672.1|4062089_4062737_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA	NA
WP_033446142.1|4066597_4067665_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
WP_003815084.1|4067675_4068485_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815086.1|4068574_4069348_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_023853189.1|4069348_4069513_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930363.1|4069530_4070481_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
