The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP012083	Bordetella pertussis strain I751 chromosome, complete genome	4109556	27282	70036	4109556	tRNA,transposase	Synechococcus_phage(50.0%)	41	NA	NA
WP_010929577.1|27282_28233_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995007.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929578.1|28674_29109_-	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_019247164.1|29141_30359_-	thiolase family protein	NA	NA	NA	NA	NA
WP_010929580.1|30364_30862_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_019247165.1|31069_32005_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929582.1|32214_33006_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929583.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010929584.1|34625_35576_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814398.1|35572_36763_-	MFS transporter	NA	NA	NA	NA	NA
WP_010929585.1|37012_37924_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010929586.1|37925_40064_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003814404.1|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|41318_42212_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247766.1|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|42687_43218_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_010929588.1|43663_44614_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929589.1|45200_45749_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|45720_45957_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|46084_46978_+	AEC family transporter	NA	NA	NA	NA	NA
WP_010929590.1|48147_49395_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|49391_50006_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_010929591.1|50141_51092_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443813.1|51134_52391_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|53622_54357_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|54362_54953_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|54977_55667_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|55663_56425_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|56504_57404_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|57497_58448_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929595.1|59248_60475_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_047122776.1|60474_60888_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929597.1|61077_62019_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248755.1|62442_63417_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929599.1|63473_64055_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010929600.1|64067_64370_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_029443770.1|64488_65547_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_019247832.1|65581_66853_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010929603.1|67482_68664_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929584.1|69085_70036_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP012083	Bordetella pertussis strain I751 chromosome, complete genome	4109556	77634	136108	4109556	tRNA,transposase	Planktothrix_phage(22.22%)	54	NA	NA
WP_005012067.1|77634_78585_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166334.1|78659_79604_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929608.1|79600_81475_-	O-antigen biosynthesis protein WlbL	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
WP_003807102.1|82822_83527_-	O-antigen biosynthesis protein WlbI	NA	NA	NA	NA	NA
WP_010929609.1|83523_84696_-	O-antigen biosynthesis protein WlbH	NA	NA	NA	NA	NA
WP_010929610.1|84891_85485_-	O-antigen biosynthesis protein WlbG	NA	NA	NA	NA	NA
WP_010929611.1|85481_86714_-	O-antigen biosynthesis protein WlbF	NA	NA	NA	NA	NA
WP_010929612.1|86731_87991_-	O-antigen biosynthesis protein WlbE	NA	NA	NA	NA	NA
WP_010929613.1|88014_89103_-	O-antigen biosynthesis protein WlbD	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
WP_010929614.1|89110_90211_-	O-antigen biosynthesis protein WlbC	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
WP_003807114.1|90214_90790_-	O-antigen biosynthesis protein WlbB	NA	NA	NA	NA	NA
WP_003807115.1|90793_91846_-	O-antigen biosynthesis protein WlbA	NA	NA	NA	NA	NA
WP_010929615.1|91976_92984_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
WP_010929616.1|92985_94272_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
WP_003807124.1|94288_94444_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929617.1|94468_95272_-	type III pantothenate kinase	NA	NA	NA	NA	NA
WP_010929618.1|95268_96135_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_010929619.1|96209_97340_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003807131.1|97339_98179_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
WP_010929620.1|99111_99714_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_010929621.1|99743_100397_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003807138.1|100529_101786_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
WP_010929622.1|101833_102733_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_003818417.1|102808_103084_+	YbeD family protein	NA	NA	NA	NA	NA
WP_010929623.1|103091_103754_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
WP_003807146.1|103815_104817_+	lipoyl synthase	NA	NA	NA	NA	NA
WP_003807148.1|104831_105380_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
WP_010929624.1|105437_106334_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_010929625.1|106330_107392_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
WP_010929626.1|107427_108378_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929627.1|109277_110471_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_010929628.1|110552_111182_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_010927242.1|111243_111927_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_023853376.1|111936_113619_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003815933.1|113906_114254_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
WP_003815930.1|114344_114662_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|114944_115961_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815929.1|116036_116837_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003815927.1|116833_117709_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010929633.1|117719_119012_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929634.1|119054_120095_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
WP_010929635.1|120200_121022_-	phosphodiesterase	NA	NA	NA	NA	NA
WP_005012067.1|121122_122073_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905488.1|122171_123077_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.7	9.8e-21
WP_003815918.1|123073_123907_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010929637.1|124743_125754_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_019247800.1|125750_126140_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010929638.1|127033_128287_+	amidase	NA	NA	NA	NA	NA
WP_010929639.1|128377_130078_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_010929640.1|130504_131152_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853393.1|131150_132590_+	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_003815905.1|132682_132985_+	bacterioferritin-associated ferredoxin	NA	NA	NA	NA	NA
WP_010929512.1|133012_133891_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|135157_136108_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP012083	Bordetella pertussis strain I751 chromosome, complete genome	4109556	164893	225404	4109556	tRNA,transposase,protease	Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)	51	NA	NA
WP_005015810.1|164893_165844_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929659.1|167287_168190_-	YgcG family protein	NA	NA	NA	NA	NA
WP_003815889.1|168167_168797_-	LemA family protein	NA	NA	NA	NA	NA
WP_010929660.1|169079_170510_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.8	5.8e-44
WP_010929661.1|170543_171173_+	LysE family transporter	NA	NA	NA	NA	NA
WP_003815895.1|171221_172829_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
WP_010929663.1|172853_173537_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815898.1|173618_174095_-	bacterioferritin	NA	NA	NA	NA	NA
WP_010929591.1|174301_175252_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929664.1|176367_176895_+	META domain-containing protein	NA	NA	NA	NA	NA
WP_010929665.1|176986_177802_+	META and DUF4377 domain-containing protein	NA	NA	NA	NA	NA
WP_003808370.1|177862_178597_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_010929666.1|178634_180713_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
WP_003808374.1|180962_181235_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446322.1|181336_182422_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010929668.1|182425_184330_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA	NA
WP_014486044.1|184326_188001_+	translocation/assembly module TamB domain-containing protein	NA	NA	NA	NA	NA
WP_010929670.1|188061_188625_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
WP_003808385.1|188632_189055_-	VOC family protein	NA	NA	NA	NA	NA
WP_010929671.1|189082_189502_-	VOC family protein	NA	NA	NA	NA	NA
WP_076879599.1|189530_190004_-	GNAT family N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	31.1	2.2e-11
WP_003808391.1|190103_190601_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003808393.1|190755_193026_+	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA	NA
WP_010929672.1|193074_194307_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010929591.1|194405_195356_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929673.1|195458_196094_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.8e-83
WP_019248671.1|196090_196984_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_010929675.1|197378_198479_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_010929676.1|198560_198935_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_010929677.1|198994_201859_+	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
WP_010929678.1|202003_202744_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929679.1|202813_204025_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929680.1|204053_205022_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931070.1|205635_206586_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929699.1|206742_207066_+	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
WP_023853200.1|207170_208211_-	cyclase family protein	NA	NA	NA	NA	NA
WP_010929697.1|208216_208996_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
WP_003807672.1|209041_209338_-	YciI family protein	NA	NA	NA	NA	NA
WP_003807674.1|209363_209639_-	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
WP_003819086.1|209695_210340_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010929696.1|210339_211026_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010929695.1|211155_212007_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929694.1|212057_212783_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929693.1|212814_214164_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929692.1|214275_215208_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_033446321.1|215665_218461_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
WP_010929690.1|219054_221997_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_010929689.1|222068_222788_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_010929688.1|222826_223375_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929687.1|223529_224429_+	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_005012808.1|224453_225404_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP012083	Bordetella pertussis strain I751 chromosome, complete genome	4109556	233336	286926	4109556	tRNA,transposase,protease	Bacillus_phage(25.0%)	47	NA	NA
WP_005012067.1|233336_234287_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|234373_235324_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930742.1|235320_236271_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929700.1|236369_237167_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003814363.1|238116_238527_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_003814358.1|239548_240292_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814356.1|240335_241379_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814355.1|241549_243652_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_003814351.1|245062_246019_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929701.1|246037_246529_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_010929702.1|246525_247881_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
WP_010929703.1|247881_248580_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_010929704.1|248576_249278_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_003814339.1|249530_250580_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
WP_003814337.1|250685_251627_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_010929705.1|251623_253513_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
WP_003814332.1|253599_254238_+	VTT domain-containing protein	NA	NA	NA	NA	NA
WP_019247543.1|254380_255766_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
WP_010929706.1|255696_256233_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_010929707.1|256384_257776_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_010929708.1|257792_258773_-	AEC family transporter	NA	NA	NA	NA	NA
WP_003814324.1|258908_259892_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
WP_010929709.1|259956_260856_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814321.1|260962_262717_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_010929710.1|262724_263849_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929711.1|263862_264843_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_023999816.1|265573_266911_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929712.1|267084_267630_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929713.1|267713_269333_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004567834.1|269348_270503_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_003817696.1|270516_270642_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_010929714.1|270638_272390_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
WP_010929715.1|272386_274066_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
WP_010929716.1|274128_274677_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.3e-28
WP_010929717.1|275819_276098_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|277141_278092_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929718.1|278370_278532_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_010929719.1|278539_278680_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815821.1|279198_279648_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
WP_003815819.1|279657_280269_-	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_019247426.1|280427_281282_-	cytochrome c1	NA	NA	NA	NA	NA
WP_003815816.1|281301_282684_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_003815815.1|282748_283390_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_010929721.1|283529_283988_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_010927226.1|284012_284789_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_014906092.1|284842_285979_+	trypsin-like peptidase domain-containing protein	NA	W5SAB9	Pithovirus	31.2	1.2e-07
WP_005015810.1|285975_286926_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
NZ_CP012083	Bordetella pertussis strain I751 chromosome, complete genome	4109556	555311	614611	4109556	tRNA,transposase	Acinetobacter_phage(27.27%)	48	NA	NA
WP_023852617.1|555311_556262_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003815367.1|557585_558362_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931383.1|558396_560169_+	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931382.1|560170_561073_-	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_003817821.1|561197_561557_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931381.1|561588_562551_+|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_005012067.1|562649_563600_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931380.1|563612_564548_-	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_010931379.1|564607_565447_-	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931378.1|565443_566613_-	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_003815379.1|566609_567899_-	murein transglycosylase A	NA	NA	NA	NA	NA
WP_003815381.1|567941_568316_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003815384.1|568421_569159_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_010931377.1|569166_569871_+	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_010931376.1|570134_571655_+	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_003815390.1|571710_572274_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_003817833.1|572292_573324_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_010931375.1|573320_574109_+	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_019247413.1|574129_574288_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023997720.1|574284_575274_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|577030_577981_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931374.1|579203_580106_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814312.1|580107_580962_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931373.1|581008_582118_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931372.1|582128_582647_-	flavin reductase family protein	NA	NA	NA	NA	NA
WP_003814302.1|582676_583309_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_003814300.1|583380_584040_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_003814298.1|584036_585257_-	MFS transporter	NA	NA	NA	NA	NA
WP_019247745.1|585525_586398_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_010931370.1|586553_587291_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931369.1|587293_588925_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931368.1|589020_590010_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010927020.1|590006_590717_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931363.1|590812_591829_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814287.1|592100_592727_-	aminotransferase class IV	NA	NA	NA	NA	NA
WP_010931367.1|592782_593910_-	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
WP_003814283.1|593915_599633_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
WP_003814277.1|600200_601145_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
WP_003814275.1|601333_602269_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_010931365.1|602386_603958_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247692.1|604037_605246_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_019247693.1|605743_606661_+	DMT family transporter	NA	NA	NA	NA	NA
WP_003814254.1|609021_609243_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_010929632.1|609573_610590_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814252.1|610674_610926_-	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_003814250.1|610929_611745_-	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_010931362.1|611857_612736_-	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003820957.1|612847_614611_-|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
>prophage 7
NZ_CP012083	Bordetella pertussis strain I751 chromosome, complete genome	4109556	620766	674507	4109556	transposase	Salmonella_phage(33.33%)	48	NA	NA
WP_010930179.1|620766_621717_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994844.1|621812_622784_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931357.1|622788_623469_-	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_003814742.1|623606_623999_+	OsmC family protein	NA	NA	NA	NA	NA
WP_010931561.1|624106_625123_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814739.1|625362_626148_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931356.1|626242_627652_-	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_010927090.1|627662_628463_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931355.1|628483_629254_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_010931354.1|629296_629764_+	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_005013747.1|629760_630711_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818344.1|632659_633538_-	fatty acid desaturase	NA	NA	NA	NA	NA
WP_019247959.1|634464_637443_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931070.1|637796_638747_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931353.1|638743_639832_-	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_010931352.1|639867_640731_-	MaoC family dehydratase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010931351.1|641870_642260_-	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_014486103.1|642263_643046_-	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_047122778.1|643079_643865_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931349.1|644140_645280_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931348.1|645276_646068_+	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931347.1|646064_646814_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931346.1|646810_647683_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_004566224.1|647682_648684_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003808195.1|648680_649844_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003808193.1|649869_650553_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247312.1|650506_651841_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931344.1|651833_652928_+	CoA transferase	NA	NA	NA	NA	NA
WP_005012067.1|653694_654645_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931343.1|656585_657845_+	YeaH/YhbH family protein	NA	NA	NA	NA	NA
WP_003814858.1|657841_659380_+	SpoVR family protein	NA	NA	NA	NA	NA
WP_003814856.1|659376_660573_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931342.1|660569_661946_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003814852.1|661957_662974_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010927102.1|663042_664278_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010931341.1|664378_665173_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929282.1|665542_665950_+	GFA family protein	NA	NA	NA	NA	NA
WP_010929281.1|666367_666640_-	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_124740609.1|666809_667034_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814832.1|667221_668076_+	urease accessory protein UreD	NA	NA	NA	NA	NA
WP_010931340.1|668176_668479_+	urease subunit gamma	NA	NA	NA	NA	NA
WP_003814828.1|668523_669141_+	HupE/UreJ family protein	NA	NA	NA	NA	NA
WP_010931338.1|669157_669466_+	urease subunit beta	NA	NA	NA	NA	NA
WP_010931337.1|669462_671178_+	urease subunit alpha	NA	NA	NA	NA	NA
WP_014905506.1|671180_671798_+	urease accessory protein UreE	NA	NA	NA	NA	NA
WP_019247677.1|671898_672483_+	urease accessory protein UreF	NA	NA	NA	NA	NA
WP_010931336.1|672507_673152_+	urease accessory protein UreG	NA	NA	NA	NA	NA
WP_023995489.1|673556_674507_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 8
NZ_CP012083	Bordetella pertussis strain I751 chromosome, complete genome	4109556	723445	764444	4109556	tRNA,transposase,protease,integrase	Pseudomonas_phage(50.0%)	32	720693:720711	741630:741648
720693:720711	attL	CTGCCTGGCGTGGCCGAGT	NA	NA	NA	NA
WP_010931308.1|723445_724042_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931307.1|724038_724821_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_010931306.1|724893_725985_+	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_010931305.1|726264_727392_+|integrase	site-specific integrase	integrase	A0A1B0VMI6	Pseudomonas_phage	33.6	1.4e-48
WP_010931304.1|727733_728780_+	Fic family protein	NA	NA	NA	NA	NA
WP_010931303.1|728927_732047_+	DEAD/DEAH box helicase family protein	NA	NA	NA	NA	NA
WP_127821374.1|732048_732237_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|732196_733147_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162494040.1|733164_733323_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931301.1|736064_737276_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_005013747.1|737459_738410_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077274087.1|738426_738921_+	DUF4276 family protein	NA	NA	NA	NA	NA
WP_019247740.1|738924_739182_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019248455.1|739725_740637_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_029443992.1|740718_741003_+	ATP-dependent helicase	NA	A0A1V0SIN4	Klosneuvirus	34.1	6.8e-05
WP_005012067.1|741786_742737_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
741630:741648	attR	ACTCGGCCACGCCAGGCAG	NA	NA	NA	NA
WP_019247178.1|743155_745720_-	autotransporter domain-containing protein	NA	NA	NA	NA	NA
WP_019247179.1|745764_747618_-	autotransporter-associated beta strand repeat-containing protein	NA	NA	NA	NA	NA
WP_014905963.1|747950_749522_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_162291319.1|750790_750946_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|750963_751914_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905961.1|751999_752740_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_029443749.1|752966_753914_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|755301_756252_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994811.1|756269_756482_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814139.1|756445_757261_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931299.1|757393_758833_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003814142.1|758846_759188_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010931298.1|759242_760898_+	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
WP_003814146.1|761049_762060_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003814148.1|762192_762966_+	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012067.1|763493_764444_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP012083	Bordetella pertussis strain I751 chromosome, complete genome	4109556	774371	821989	4109556	tRNA,transposase,protease,holin	Bovine_alphaherpesvirus(10.0%)	47	NA	NA
WP_005012808.1|774371_775322_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818450.1|775460_776213_+	uracil-DNA glycosylase	NA	A0A1Y0B680	Bovine_alphaherpesvirus	47.5	2.5e-46
WP_010931273.1|776451_778176_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.9	9.5e-49
WP_004566001.1|778195_779455_+	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_010931274.1|779469_780564_-|tRNA	CCA tRNA nucleotidyltransferase	tRNA	A0A0F6YPT7	Sinorhizobium_phage	50.5	2.4e-50
WP_023995440.1|780560_782687_-	lytic transglycosylase domain-containing protein	NA	A0A0S2SXL7	Bacillus_phage	36.6	5.5e-14
WP_010931276.1|782699_783380_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
WP_003807204.1|783657_785031_+	MHS family MFS transporter	NA	NA	NA	NA	NA
WP_003818444.1|785032_786052_+	histone deacetylase family protein	NA	A0A2K9L473	Tupanvirus	31.7	3.4e-22
WP_003818443.1|786115_787087_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|787151_788102_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003807199.1|788200_789043_-	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA	NA
WP_010931277.1|789042_789378_-|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_010931278.1|789448_790867_-	adenosylhomocysteinase	NA	S4VPF6	Pandoravirus	29.4	8.7e-40
WP_003807194.1|791146_792187_-	glycosyltransferase family 1 protein	NA	NA	NA	NA	NA
WP_003818441.1|792266_792518_-	DUF1289 domain-containing protein	NA	NA	NA	NA	NA
WP_010925730.1|792628_793792_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	60.8	5.0e-126
WP_010931279.1|794075_794930_+	lysophospholipid acyltransferase family protein	NA	NA	NA	NA	NA
WP_010931280.1|794926_795817_+	lysophospholipid acyltransferase family protein	NA	NA	NA	NA	NA
WP_003807183.1|795859_796771_+	diaminopimelate epimerase	NA	NA	NA	NA	NA
WP_010931281.1|796797_797490_+	DUF484 family protein	NA	NA	NA	NA	NA
WP_010931282.1|797504_798485_+	tyrosine recombinase XerC	NA	A0A166YH27	Gordonia_phage	30.5	3.3e-14
WP_010931283.1|798497_800639_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_003818434.1|800687_801656_-	putative membrane protein	NA	NA	NA	NA	NA
WP_019247300.1|801646_802315_-	DUF1007 family protein	NA	NA	NA	NA	NA
WP_010931286.1|802275_803211_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931287.1|803207_804104_-	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_010931288.1|804100_804823_-	metal ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	30.0	1.1e-11
WP_019248127.1|804813_804978_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003807166.1|805151_805655_+	transcriptional repressor	NA	NA	NA	NA	NA
WP_010931290.1|805931_807047_+	GTP-binding protein	NA	NA	NA	NA	NA
WP_003807164.1|807189_807654_+	RNA polymerase-binding protein DksA	NA	NA	NA	NA	NA
WP_010931291.1|807801_808341_+|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_003807162.1|808362_809697_+|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A191ZC11	Erwinia_phage	29.6	3.5e-43
WP_003807161.1|809710_810016_-	copper-binding protein	NA	NA	NA	NA	NA
WP_023853416.1|810440_811022_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA	NA
WP_005013747.1|811103_812054_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|812152_813103_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814620.1|813543_814449_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_023853019.1|814504_816109_-	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
WP_010931270.1|816365_817871_-	tripartite tricarboxylate transporter permease	NA	NA	NA	NA	NA
WP_003820744.1|817885_818350_-	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA	NA
WP_005012067.1|818639_819590_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268687.1|819607_819796_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003820745.1|819752_820283_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814611.1|820282_820594_+	cell division protein ZapA	NA	NA	NA	NA	NA
WP_005012808.1|821038_821989_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP012083	Bordetella pertussis strain I751 chromosome, complete genome	4109556	1006206	1100243	4109556	transposase	Bacillus_virus(30.0%)	88	NA	NA
WP_005012067.1|1006206_1007157_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486100.1|1007259_1007922_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019249309.1|1008016_1008187_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247599.1|1008539_1009541_+	amidase	NA	NA	NA	NA	NA
WP_003818702.1|1009543_1010740_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486098.1|1010760_1011564_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_019247598.1|1011644_1011941_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247597.1|1011971_1012535_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014486097.1|1012575_1013433_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003818698.1|1013440_1014190_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.5	6.2e-29
WP_014486096.1|1014211_1015084_+	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_014486095.1|1015112_1015892_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486094.1|1015925_1016723_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003808978.1|1019377_1019770_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486091.1|1019763_1020624_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003818691.1|1020627_1021590_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_014486089.1|1022366_1023056_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.8	4.8e-12
WP_010929588.1|1023916_1024867_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931181.1|1025216_1026086_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010926062.1|1026156_1026852_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_010931179.1|1026841_1027351_+	nucleoside deaminase	NA	NA	NA	NA	NA
WP_010931178.1|1027347_1028568_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931177.1|1028515_1029418_-	transcriptional regulator GcvA	NA	NA	NA	NA	NA
WP_023997744.1|1030304_1031591_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931176.1|1031629_1033003_+	amidase	NA	NA	NA	NA	NA
WP_010931175.1|1033041_1033743_-	riboflavin synthase	NA	NA	NA	NA	NA
WP_010931174.1|1034041_1035031_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003809010.1|1035131_1035593_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931173.1|1035608_1036157_-	cysteine dioxygenase family protein	NA	NA	NA	NA	NA
WP_010931172.1|1036298_1037774_-	acyl--CoA ligase	NA	Q75ZG1	Hepacivirus	25.6	3.0e-35
WP_010931171.1|1037879_1038971_+	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
WP_010931170.1|1038974_1039757_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931169.1|1039766_1040555_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.0	1.1e-33
WP_010931168.1|1041680_1042115_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_010931167.1|1042111_1043122_-	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_003809025.1|1043165_1044092_-	VOC family protein	NA	NA	NA	NA	NA
WP_003809026.1|1044378_1044747_+	DUF861 domain-containing protein	NA	NA	NA	NA	NA
WP_154698394.1|1044799_1044946_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853143.1|1044963_1045914_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931165.1|1045958_1048385_+	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	33.8	1.2e-86
WP_010931164.1|1048433_1049126_+	HD domain-containing protein	NA	A0A1D6Y7U0	Golden_Marseillevirus	29.9	4.7e-07
WP_010931163.1|1049198_1050398_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_003819549.1|1050415_1051321_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931162.1|1051436_1052366_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010931161.1|1052391_1053738_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931160.1|1053765_1054515_+	SDR family oxidoreductase	NA	A0A0M4JSW6	Mollivirus	26.4	1.2e-11
WP_010931159.1|1054528_1055311_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_005012067.1|1055503_1056454_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931158.1|1056515_1057625_-	porin	NA	NA	NA	NA	NA
WP_003815281.1|1058137_1058974_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
WP_023997028.1|1059043_1060009_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|1060005_1060956_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023998107.1|1060973_1061144_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247492.1|1061341_1061884_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1062919_1063870_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247402.1|1064111_1064480_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019248356.1|1064525_1065650_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931156.1|1066784_1067537_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931155.1|1067628_1068249_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852714.1|1068352_1069303_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931154.1|1069299_1071408_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003820814.1|1071552_1072212_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_003820813.1|1072243_1072708_-	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_019248355.1|1072983_1073169_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931153.1|1073220_1073973_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931152.1|1073979_1075242_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_023852748.1|1075283_1076522_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820806.1|1077599_1078727_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_003814524.1|1078737_1079565_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_010931150.1|1079551_1080418_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010931149.1|1081784_1082189_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|1082280_1083231_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_155120814.1|1083248_1083413_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033446288.1|1083600_1084512_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003820799.1|1084526_1085237_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931147.1|1085233_1086478_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003820797.1|1086479_1086914_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_003814535.1|1086942_1087248_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_005012067.1|1087346_1088297_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247277.1|1088353_1089508_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_010930176.1|1089582_1090533_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931144.1|1091064_1091862_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247918.1|1091909_1092563_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003814544.1|1092519_1093608_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_003814547.1|1093772_1095998_-	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_023852715.1|1098275_1099172_+	inositol monophosphatase	NA	NA	NA	NA	NA
WP_162268686.1|1099125_1099275_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1099292_1100243_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_CP012083	Bordetella pertussis strain I751 chromosome, complete genome	4109556	1130629	1202649	4109556	protease,transposase	uncultured_Mediterranean_phage(25.0%)	54	NA	NA
WP_005012808.1|1130629_1131580_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012808.1|1131678_1132629_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931130.1|1132685_1133798_+	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_005012067.1|1136181_1137132_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931129.1|1137722_1138499_+	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_003812908.1|1138616_1138880_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931128.1|1138980_1139985_-	FecR domain-containing protein	NA	NA	NA	NA	NA
WP_010931127.1|1140185_1141787_-	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931126.1|1141812_1142571_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931125.1|1142662_1143319_-	adenylate kinase	NA	NA	NA	NA	NA
WP_010931124.1|1143409_1144174_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003812895.1|1144183_1144372_-	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931123.1|1144427_1145471_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_010931122.1|1145467_1145881_-	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_003812889.1|1145877_1146498_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_005012067.1|1146778_1147729_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931120.1|1147896_1149288_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_010931119.1|1149360_1149939_+	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_019247560.1|1150055_1151453_+	chloride channel protein	NA	NA	NA	NA	NA
WP_010931117.1|1151568_1152774_+	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_003820399.1|1152873_1153392_-	DUF192 domain-containing protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_003812875.1|1153486_1153732_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820400.1|1153959_1154274_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_010931116.1|1154363_1159553_+	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_010931115.1|1159549_1161718_+	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_010931114.1|1161773_1164089_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.1e-164
WP_003820402.1|1164093_1165413_+	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_014905522.1|1165431_1167105_+	MCE family protein	NA	NA	NA	NA	NA
WP_010931111.1|1167109_1167778_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_010931110.1|1167934_1171756_+	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_154698391.1|1171910_1172069_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930800.1|1172086_1173037_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812857.1|1173058_1174204_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|1174352_1175282_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812851.1|1175278_1176367_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_010931109.1|1176363_1177167_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812846.1|1177163_1177895_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931108.1|1177952_1179242_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931107.1|1179338_1179941_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812839.1|1184494_1184833_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931105.1|1185540_1185807_+	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_005012067.1|1187513_1188464_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931103.1|1188460_1189792_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931102.1|1191052_1193053_+	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_003819722.1|1193045_1193687_+	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_003809276.1|1193683_1194091_+	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_010931101.1|1194087_1194888_+	SURF1 family protein	NA	NA	NA	NA	NA
WP_010931100.1|1194962_1195667_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931099.1|1195698_1196493_+	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_005013747.1|1196489_1197440_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995489.1|1197538_1198489_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812014.1|1198587_1199022_-	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_010931098.1|1199104_1201441_+	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.8	3.2e-124
WP_010930525.1|1201632_1202649_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_CP012083	Bordetella pertussis strain I751 chromosome, complete genome	4109556	1243720	1325855	4109556	tRNA,transposase	Bacillus_virus(25.0%)	60	NA	NA
WP_010929591.1|1243720_1244671_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931074.1|1244758_1246411_+	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA	NA
WP_010931073.1|1246421_1247210_+	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
WP_003813284.1|1247209_1247680_+	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA	NA
WP_010931072.1|1247754_1249068_+	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
WP_010931071.1|1249121_1249727_-	fimbrial major subunit FimX	NA	NA	NA	NA	NA
WP_010927663.1|1250043_1250994_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931070.1|1250990_1251941_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931069.1|1252201_1253230_-	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010931068.1|1253309_1254608_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_003816847.1|1254604_1255186_-	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010931067.1|1255498_1259545_+	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
WP_062826587.1|1259785_1267447_+	hemagglutinin repeat-containing protein	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
WP_005012067.1|1267443_1268394_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931065.1|1269533_1270007_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931064.1|1270146_1270767_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010931063.1|1270902_1271703_+	aldolase	NA	NA	NA	NA	NA
WP_003810897.1|1271757_1272849_+	TRAP transporter substrate-binding protein DctP	NA	NA	NA	NA	NA
WP_010931062.1|1272870_1273314_-	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_010931061.1|1273342_1273975_-	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA	NA
WP_003810909.1|1274085_1274502_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931060.1|1274494_1275187_+	DUF2238 domain-containing protein	NA	NA	NA	NA	NA
WP_010931059.1|1275293_1275668_+	MAPEG family protein	NA	NA	NA	NA	NA
WP_010931058.1|1275744_1276554_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931057.1|1276649_1277594_+	dihydrodipicolinate synthase family protein	NA	NA	NA	NA	NA
WP_003816577.1|1277632_1278604_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003810921.1|1278694_1279132_-	carboxypeptidase regulatory-like domain-containing protein	NA	NA	NA	NA	NA
WP_029443733.1|1279190_1280072_-	NRDE family protein	NA	NA	NA	NA	NA
WP_010931054.1|1281075_1281936_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010931053.1|1281968_1283351_+	FAD-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	28.4	7.9e-30
WP_010931052.1|1283347_1284367_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247407.1|1284739_1285234_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931051.1|1285241_1285982_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931050.1|1286062_1287667_-	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA	NA
WP_010931049.1|1287706_1288495_-	DeoR family transcriptional regulator	NA	A0A077SK06	Escherichia_phage	30.4	2.0e-22
WP_010931048.1|1289697_1290786_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.1	9.7e-15
WP_010931047.1|1291666_1292479_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_004568502.1|1292491_1292800_+	DUF2160 domain-containing protein	NA	NA	NA	NA	NA
WP_010931046.1|1292917_1294648_+	carbohydrate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019249399.1|1294649_1295795_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810957.1|1296713_1297181_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_019247521.1|1297316_1298699_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_014486086.1|1298695_1299820_+	DNA repair exonuclease	NA	NA	NA	NA	NA
WP_010931042.1|1299816_1302453_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010931070.1|1302868_1303819_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931041.1|1307565_1308177_-	DUF2239 family protein	NA	NA	NA	NA	NA
WP_003812368.1|1308399_1309860_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.3	1.6e-97
WP_010931040.1|1309956_1311549_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	33.3	1.0e-17
WP_019247974.1|1311902_1312160_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003816876.1|1312161_1313502_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010931038.1|1313597_1314287_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247976.1|1314299_1315730_+	MFS transporter	NA	NA	NA	NA	NA
WP_014905903.1|1317454_1318276_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931036.1|1318286_1319858_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010931035.1|1319886_1320864_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931034.1|1320890_1321694_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.2	2.7e-30
WP_010931033.1|1321690_1322485_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003816890.1|1322492_1323728_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_010931032.1|1323720_1324155_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|1324904_1325855_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP012083	Bordetella pertussis strain I751 chromosome, complete genome	4109556	1329966	1370635	4109556	tRNA,transposase	Salmonella_phage(33.33%)	42	NA	NA
WP_005013747.1|1329966_1330917_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931029.1|1330957_1332028_+	FUSC family protein	NA	NA	NA	NA	NA
WP_010931028.1|1332050_1332929_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931027.1|1333100_1334072_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931026.1|1334234_1335077_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931025.1|1335238_1335919_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010931024.1|1335912_1337082_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931023.1|1337078_1338110_+	alcohol dehydrogenase catalytic domain-containing protein	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
WP_010931022.1|1338153_1339395_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931021.1|1339429_1340962_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010931020.1|1341042_1341666_+	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_010931019.1|1341696_1342308_+	LysE family translocator	NA	NA	NA	NA	NA
WP_010931018.1|1342343_1342814_+	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
WP_019248147.1|1343245_1344250_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931017.1|1344286_1345801_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931016.1|1345804_1346764_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931015.1|1346792_1347596_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931014.1|1347597_1349232_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
WP_010931013.1|1349315_1350377_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_004567322.1|1350575_1350845_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931012.1|1350848_1351373_+	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
WP_010929591.1|1351788_1352739_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931011.1|1352735_1353770_-	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_003816758.1|1353878_1354517_+	DedA family protein	NA	NA	NA	NA	NA
WP_019247724.1|1354811_1355039_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003820420.1|1355161_1355875_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_005013747.1|1356119_1357070_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931009.1|1357173_1357455_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931008.1|1357569_1359018_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_005012808.1|1359128_1360079_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816756.1|1360075_1360525_-	dUTP diphosphatase	NA	S4TNT3	Salmonella_phage	67.2	3.7e-45
WP_010929584.1|1360719_1361670_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812834.1|1362005_1362203_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_003812832.1|1362218_1362578_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_010926359.1|1362652_1363675_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	38.6	1.0e-26
WP_010931007.1|1363687_1366105_+|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_010931006.1|1366110_1366452_+	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	42.2	2.8e-13
WP_003812822.1|1366510_1366921_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931005.1|1367420_1368512_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931004.1|1368695_1369292_+	lipoprotein	NA	NA	NA	NA	NA
WP_004567479.1|1369391_1369574_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|1369684_1370635_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP012083	Bordetella pertussis strain I751 chromosome, complete genome	4109556	1450312	1502465	4109556	tRNA,transposase	Salmonella_phage(25.0%)	46	NA	NA
WP_005013747.1|1450312_1451263_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023999730.1|1451280_1451433_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814065.1|1451429_1451783_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814063.1|1451795_1452158_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814061.1|1452199_1452625_-	DUF1841 family protein	NA	NA	NA	NA	NA
WP_057110980.1|1452827_1454084_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	64.8	1.2e-11
WP_003814057.1|1454282_1455263_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005015028.1|1455412_1456654_+	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1456752_1457703_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814052.1|1457711_1458407_-	two-component system response regulator KdpE	NA	NA	NA	NA	NA
WP_003814050.1|1461228_1461828_-	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
WP_010930950.1|1461838_1464004_-	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	27.1	1.2e-24
WP_010930949.1|1464027_1465812_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA	NA
WP_017685545.1|1465811_1465901_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_003814042.1|1466595_1466868_+	DUF4212 domain-containing protein	NA	NA	NA	NA	NA
WP_003814040.1|1466867_1468934_+	cation acetate symporter	NA	NA	NA	NA	NA
WP_010929577.1|1468930_1469881_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|1469979_1470930_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005015014.1|1471045_1471378_-	multidrug transporter	NA	NA	NA	NA	NA
WP_010929073.1|1471374_1472061_-	Smr/MutS family protein	NA	NA	NA	NA	NA
WP_010930948.1|1472047_1473007_-	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
WP_003814032.1|1473048_1475409_+	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
WP_010930946.1|1475408_1476041_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_010930945.1|1476142_1477483_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
WP_010930944.1|1477529_1478885_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
WP_170954289.1|1479010_1479655_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814024.1|1479599_1479917_-	virulence factor	NA	NA	NA	NA	NA
WP_003814023.1|1480189_1480705_-	hypothetical protein	NA	T1SAR8	Salmonella_phage	44.6	5.1e-06
WP_003814022.1|1480798_1480960_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814021.1|1480975_1481731_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_019247690.1|1482069_1482276_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814020.1|1482283_1482943_-	NAAT family transporter	NA	NA	NA	NA	NA
WP_010930941.1|1483237_1485442_-	TonB-dependent alcaligin siderophore receptor FauA	NA	NA	NA	NA	NA
WP_010930940.1|1485552_1486776_-	alcaligin siderophore export MFS transporter Bcr	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
WP_003814017.1|1486898_1487873_-	alcaligin siderophore biosynthesis transcriptional regulator AlcR	NA	NA	NA	NA	NA
WP_005013753.1|1487940_1489134_-	alcaligin siderophore biosynthesis protein AlcE	NA	NA	NA	NA	NA
WP_003814016.1|1489148_1489949_-	alcaligin siderophore biosynthesis protein AlcD	NA	NA	NA	NA	NA
WP_010930939.1|1489945_1491802_-	alcaligin siderophore biosynthesis protein AlcC	NA	NA	NA	NA	NA
WP_003814014.1|1491798_1492404_-	alcaligin siderophore biosynthesis protein AlcB	NA	NA	NA	NA	NA
WP_003814013.1|1492422_1493808_-	alcaligin siderophore biosynthesis protein AlcA	NA	NA	NA	NA	NA
WP_003814012.1|1494533_1495760_+	cation:proton antiporter	NA	NA	NA	NA	NA
WP_003814011.1|1495848_1496631_+	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_010929591.1|1496729_1497680_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814010.1|1497706_1498480_+	peroxide stress protein YaaA	NA	NA	NA	NA	NA
WP_003814009.1|1498491_1499733_+	MFS transporter	NA	NA	NA	NA	NA
WP_076879548.1|1501514_1502465_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP012083	Bordetella pertussis strain I751 chromosome, complete genome	4109556	1546390	1606303	4109556	tRNA,transposase	Streptococcus_virus(12.5%)	52	NA	NA
WP_010930416.1|1546390_1546879_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_019248504.1|1546996_1547575_+	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010930418.1|1547680_1548049_+	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|1548147_1549098_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994932.1|1549104_1550217_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
WP_010930419.1|1550903_1552106_+	MFS transporter	NA	NA	NA	NA	NA
WP_004568212.1|1552141_1552288_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930420.1|1552309_1554970_+	PD-(D/E)XK nuclease family protein	NA	NA	NA	NA	NA
WP_010930421.1|1554982_1558387_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_023995689.1|1559054_1561280_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.5	1.2e-43
WP_010930423.1|1561326_1561653_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_010930424.1|1561703_1562312_+	recombination protein RecR	NA	NA	NA	NA	NA
WP_005013747.1|1562410_1563361_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|1563459_1564410_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930425.1|1564479_1565244_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930426.1|1565240_1565840_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930427.1|1565943_1566795_-	neutral zinc metallopeptidase	NA	A0A1I9SA48	Rhodococcus_phage	35.3	7.0e-37
WP_010928449.1|1566854_1567481_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
WP_005012067.1|1567477_1568428_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019249265.1|1568526_1569639_-	DUF1513 domain-containing protein	NA	NA	NA	NA	NA
WP_019248041.1|1569628_1570630_-	imelysin family protein	NA	NA	NA	NA	NA
WP_019247498.1|1570735_1572247_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_023853587.1|1572243_1573548_-	imelysin	NA	NA	NA	NA	NA
WP_010930431.1|1573659_1574220_-	membrane protein	NA	NA	NA	NA	NA
WP_010930432.1|1574487_1575042_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	32.0	1.7e-15
WP_010930433.1|1575497_1575713_-	dodecin domain-containing protein	NA	NA	NA	NA	NA
WP_033446228.1|1575967_1578565_+	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	22.6	1.5e-21
WP_010930435.1|1578561_1579749_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_019248658.1|1580408_1581023_+	fimbrial protein	NA	NA	NA	NA	NA
WP_010930437.1|1581111_1582239_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA	NA
WP_033446216.1|1582250_1583156_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_005012067.1|1584048_1584999_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930439.1|1585180_1585933_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
WP_003811112.1|1586001_1586661_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
WP_003811113.1|1586657_1587386_+	glutamine ABC transporter ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	39.3	3.3e-35
WP_010930440.1|1587398_1589678_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	32.1	5.9e-06
WP_010930441.1|1589702_1589906_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_010930442.1|1589947_1590580_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	33.9	2.4e-13
WP_010930443.1|1590715_1591633_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_010930444.1|1591629_1592343_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_003811135.1|1592580_1593351_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003811137.1|1593355_1593955_-	C40 family peptidase	NA	A0A0A8WF62	Clostridium_phage	41.6	1.4e-20
WP_003811138.1|1594199_1595690_+	AMP nucleosidase	NA	NA	NA	NA	NA
WP_010926696.1|1595748_1596033_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930445.1|1596170_1596326_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811148.1|1596598_1597525_-	YicC family protein	NA	NA	NA	NA	NA
WP_003811149.1|1597661_1598402_+	ribonuclease PH	NA	NA	NA	NA	NA
WP_010930446.1|1598568_1599945_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003811152.1|1600126_1601032_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930448.1|1602683_1604486_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010930449.1|1604612_1605254_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA	NA
WP_005012808.1|1605352_1606303_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
NZ_CP012083	Bordetella pertussis strain I751 chromosome, complete genome	4109556	1651475	1707066	4109556	transposase	Brazilian_cedratvirus(25.0%)	47	NA	NA
WP_005013747.1|1651475_1652426_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930486.1|1652484_1653258_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486074.1|1653250_1654807_+	LTA synthase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1654803_1655754_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810741.1|1657080_1657683_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810743.1|1657922_1658624_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003816696.1|1658617_1659400_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_005012808.1|1659584_1660535_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930483.1|1660633_1661371_-	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_010926609.1|1661560_1662319_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930482.1|1662365_1663355_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_077069082.1|1663532_1664501_-	transporter	NA	NA	NA	NA	NA
WP_010930480.1|1666040_1667009_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930479.1|1667017_1667959_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|1668432_1669443_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930477.1|1669433_1670948_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930476.1|1670944_1672291_+	BatD family protein	NA	NA	NA	NA	NA
WP_010930475.1|1672293_1673328_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_023852967.1|1673377_1675003_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_005012067.1|1675555_1676506_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930487.1|1676610_1677558_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247865.1|1677611_1679426_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_010930489.1|1679418_1680093_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_023995112.1|1680222_1683297_+	autotransporter SphB2	NA	NA	NA	NA	NA
WP_019247905.1|1683310_1683610_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930492.1|1683924_1684548_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_010930493.1|1684791_1685661_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010930494.1|1685638_1686583_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247909.1|1686668_1687595_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247910.1|1687707_1688487_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930497.1|1688477_1689674_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010930498.1|1689704_1690655_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_010930499.1|1690876_1691566_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930500.1|1691630_1692386_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930501.1|1692437_1693430_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930502.1|1693439_1694393_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811538.1|1694508_1695471_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019249376.1|1696872_1697301_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1697297_1698248_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_170954298.1|1698541_1699279_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_010930504.1|1699702_1700890_-	MFS transporter	NA	NA	NA	NA	NA
WP_019249653.1|1700893_1701274_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930506.1|1702993_1703965_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930507.1|1703978_1704692_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930508.1|1704696_1705614_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811452.1|1705720_1706017_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929588.1|1706115_1707066_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
NZ_CP012083	Bordetella pertussis strain I751 chromosome, complete genome	4109556	1939830	2009482	4109556	tRNA,transposase	Staphylococcus_phage(16.67%)	55	NA	NA
WP_003818515.1|1939830_1942488_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	39.0	3.3e-173
WP_010930709.1|1942565_1943768_-	MFS transporter	NA	NA	NA	NA	NA
WP_003810260.1|1943764_1944277_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247822.1|1944399_1944837_-	HU family DNA-binding protein	NA	NA	NA	NA	NA
WP_010931070.1|1945113_1946064_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_062826579.1|1946162_1947113_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930710.1|1947366_1949172_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.5	2.2e-19
WP_010930711.1|1949285_1949453_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_003810297.1|1949516_1949753_-	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_010930712.1|1950121_1951321_-	multidrug effflux MFS transporter	NA	NA	NA	NA	NA
WP_010929591.1|1952836_1953787_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818523.1|1954238_1955240_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810306.1|1955412_1956270_+	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA	NA
WP_003810308.1|1956266_1957529_+	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.8e-28
WP_003818524.1|1957629_1958004_+	tautomerase family protein	NA	NA	NA	NA	NA
WP_010930713.1|1958076_1959264_+	acetyl-CoA C-acyltransferase family protein	NA	NA	NA	NA	NA
WP_010930714.1|1959348_1960119_+	spermidine synthase	NA	NA	NA	NA	NA
WP_010930715.1|1960232_1960997_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930716.1|1960947_1962249_+	malonyl-CoA decarboxylase family protein	NA	NA	NA	NA	NA
WP_010930717.1|1962245_1963052_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003818532.1|1964796_1965768_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003818533.1|1965924_1966437_+	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	52.3	1.8e-43
WP_010930718.1|1966595_1967570_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930719.1|1968570_1969365_+	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.7	5.1e-05
WP_003818535.1|1969390_1970197_-	TOBE domain-containing protein	NA	NA	NA	NA	NA
WP_003810329.1|1970307_1970898_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_010930720.1|1970908_1972087_+	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_010930721.1|1972189_1972564_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_019248531.1|1972816_1974148_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_019247651.1|1974214_1977445_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_003810344.1|1978935_1979682_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_010930724.1|1979766_1980228_+	holo-ACP synthase	NA	NA	NA	NA	NA
WP_010930725.1|1980265_1981324_+	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_010930726.1|1981286_1983116_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_003810356.1|1983155_1983728_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930727.1|1985152_1985974_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	4.1e-42
WP_010930728.1|1986292_1987615_+	isocitrate lyase	NA	NA	NA	NA	NA
WP_010930729.1|1987974_1988610_+	membrane protein	NA	NA	NA	NA	NA
WP_010930730.1|1988569_1989520_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930731.1|1990390_1991263_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930732.1|1991340_1992480_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930733.1|1992838_1994095_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_003816691.1|1994100_1994628_+	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_003816690.1|1994632_1995451_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003816687.1|1995450_1996173_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930735.1|1996194_1996509_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930736.1|1996526_1997675_+	CoA transferase	NA	NA	NA	NA	NA
WP_010930737.1|1997705_1998581_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816680.1|1998577_1999897_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_014486081.1|1999969_2001166_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_010930739.1|2001176_2002664_-	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_010930740.1|2005258_2006158_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852887.1|2006295_2007261_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005015810.1|2007359_2008310_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2008531_2009482_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
NZ_CP012083	Bordetella pertussis strain I751 chromosome, complete genome	4109556	2020978	2070380	4109556	transposase	Erysipelothrix_phage(16.67%)	45	NA	NA
WP_005013747.1|2020978_2021929_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812172.1|2023072_2023369_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247707.1|2023543_2024896_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	2.9e-45
WP_010930153.1|2025038_2026055_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930748.1|2028034_2029048_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_010930749.1|2029134_2030040_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812179.1|2030196_2030541_+	exported protein	NA	NA	NA	NA	NA
WP_010930750.1|2030698_2031157_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_010930751.1|2031170_2033387_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_003812183.1|2033383_2034445_+	XdhC family protein	NA	NA	NA	NA	NA
WP_010930752.1|2034473_2035448_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930753.1|2035399_2036218_-	hypothetical protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	28.8	2.3e-16
WP_003812191.1|2036230_2036839_-	LON peptidase substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930754.1|2037013_2037409_+	VOC family protein	NA	NA	NA	NA	NA
WP_010930755.1|2037427_2038867_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	37.4	7.4e-55
WP_003812199.1|2038895_2039243_+	GFA family protein	NA	NA	NA	NA	NA
WP_010929577.1|2039261_2040212_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2040864_2041815_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997035.1|2041898_2043716_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
WP_019247659.1|2043789_2044437_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930758.1|2044449_2045379_-	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_014905663.1|2045548_2046013_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003816977.1|2046260_2046941_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003816975.1|2046989_2048681_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
WP_010930760.1|2048696_2049248_-	SRPBCC family protein	NA	NA	NA	NA	NA
WP_003816971.1|2049244_2049616_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930761.1|2049728_2050565_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_029443822.1|2050575_2051100_-	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_003812228.1|2051197_2051377_+	DUF3008 family protein	NA	NA	NA	NA	NA
WP_010930763.1|2051506_2052481_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003816964.1|2052611_2052968_+	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
WP_010930764.1|2052957_2053833_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_010930765.1|2053931_2054816_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930766.1|2054837_2056133_-	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_003816959.1|2057081_2057732_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930767.1|2057819_2059340_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930768.1|2059597_2061463_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|2062508_2063459_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268681.1|2063476_2063617_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930769.1|2064431_2064791_-	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_010930770.1|2064778_2066215_-	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930771.1|2066211_2066865_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930772.1|2066861_2068055_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930773.1|2068158_2069433_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_005012067.1|2069429_2070380_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
NZ_CP012083	Bordetella pertussis strain I751 chromosome, complete genome	4109556	2081584	2149960	4109556	protease,transposase,tRNA	Klosneuvirus(22.22%)	59	NA	NA
WP_005013747.1|2081584_2082535_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122784.1|2082494_2082908_-	transcriptional regulator	NA	A0A222YXG1	Escherichia_phage	59.0	3.8e-36
WP_003816708.1|2083192_2083492_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930783.1|2083901_2086184_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	30.1	3.2e-36
WP_124740709.1|2086649_2086844_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930784.1|2086869_2088900_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	41.9	1.0e-65
WP_006218592.1|2088919_2089132_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_003810720.1|2089409_2089949_-	phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_023852902.1|2090062_2091358_-	adenylosuccinate synthase	NA	A0A160ER07	Powai_lake_megavirus	33.5	3.0e-63
WP_010930786.1|2091434_2092592_-	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
WP_010930787.1|2092775_2093675_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_010930788.1|2093693_2094998_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930789.1|2094963_2096070_-	GTPase HflX	NA	NA	NA	NA	NA
WP_003810707.1|2096157_2096394_-	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930790.1|2096532_2097603_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810703.1|2097606_2098962_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_077069010.1|2098988_2100149_-	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_010930791.1|2100151_2100790_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_023995843.1|2100791_2102078_-|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930793.1|2102136_2103432_-	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_003810693.1|2103438_2103945_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_004568542.1|2103941_2105090_-	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_003810689.1|2105117_2105543_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
WP_010930794.1|2105865_2108748_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
WP_023852900.1|2108840_2109596_-	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_010930796.1|2110361_2111711_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_076879566.1|2111809_2112760_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930048.1|2112858_2113809_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930594.1|2113882_2114356_+	RidA family protein	NA	NA	NA	NA	NA
WP_010930593.1|2114381_2115590_+	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_003816734.1|2115586_2116360_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_014905757.1|2116359_2116983_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_010926757.1|2117148_2117409_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_010930591.1|2117712_2118294_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004568544.1|2118360_2118615_-	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_010930590.1|2118601_2121226_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
WP_010930589.1|2121297_2122116_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810661.1|2122112_2122718_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_010930588.1|2122755_2123889_-	general secretion pathway protein	NA	NA	NA	NA	NA
WP_010930587.1|2125604_2125979_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930586.1|2126076_2127351_-	type 4b pilus protein PilO2	NA	NA	NA	NA	NA
WP_010930585.1|2127354_2128932_-	lipoprotein	NA	NA	NA	NA	NA
WP_010930584.1|2129838_2131194_-	amidase	NA	NA	NA	NA	NA
WP_010930583.1|2131190_2132825_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	8.2e-18
WP_010930582.1|2132817_2133648_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003810637.1|2133665_2134610_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930581.1|2134662_2136237_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247553.1|2136284_2136644_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247554.1|2136636_2136957_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247555.1|2137072_2138005_+	acyclic terpene utilization AtuA family protein	NA	NA	NA	NA	NA
WP_003818676.1|2138107_2139064_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810623.1|2139213_2140551_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010930578.1|2140555_2141812_-	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_010930577.1|2142007_2143054_-	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
WP_003818672.1|2143111_2143480_-	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
WP_010930576.1|2143610_2144483_-	MOSC N-terminal beta barrel domain-containing protein	NA	NA	NA	NA	NA
WP_003818670.1|2144559_2145462_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930574.1|2146518_2147736_-	four-carbon acid sugar kinase family protein	NA	NA	NA	NA	NA
WP_010929577.1|2149009_2149960_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NZ_CP012083	Bordetella pertussis strain I751 chromosome, complete genome	4109556	2165238	2230059	4109556	protease,transposase,tRNA	Lake_Baikal_phage(18.18%)	54	NA	NA
WP_005012067.1|2165238_2166189_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247934.1|2166759_2166972_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247935.1|2166989_2167721_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812478.1|2167755_2168397_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010930565.1|2168389_2169058_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010930564.1|2171270_2172047_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930563.1|2172068_2173226_-	thiolase	NA	NA	NA	NA	NA
WP_003812491.1|2173222_2173654_-	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_015063637.1|2173650_2174454_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010930561.1|2174467_2174869_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_010930560.1|2174935_2175907_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930559.1|2175972_2177196_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247936.1|2177423_2178374_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930557.1|2178497_2180951_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.0	1.5e-220
WP_010930556.1|2181139_2182444_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	53.8	3.2e-129
WP_003812508.1|2182548_2183202_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	57.5	6.8e-56
WP_010930555.1|2183204_2184515_-	trigger factor	NA	NA	NA	NA	NA
WP_010930554.1|2184711_2185272_+	TIGR00645 family protein	NA	K4K6D8	Caulobacter_phage	33.7	1.0e-23
WP_010930553.1|2185383_2185584_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.4	7.4e-14
WP_003812519.1|2185929_2186496_-	DUF924 family protein	NA	NA	NA	NA	NA
WP_010930551.1|2186579_2186783_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.1	1.6e-16
WP_003812524.1|2187089_2187410_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812526.1|2187451_2187733_-	membrane protein	NA	NA	NA	NA	NA
WP_010930550.1|2187807_2189064_-	autotransporter Phg	NA	NA	NA	NA	NA
WP_010930549.1|2189446_2189776_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003812536.1|2191346_2192168_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
WP_010930548.1|2192167_2193307_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
WP_019247938.1|2193313_2194210_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_010930546.1|2194206_2196132_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	31.8	1.1e-66
WP_010926400.1|2196491_2199104_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_003812546.1|2199156_2201457_-	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	35.9	9.9e-110
WP_003812548.1|2201453_2202662_-	fatty acid desaturase	NA	NA	NA	NA	NA
WP_010930545.1|2202923_2203298_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2203294_2204245_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879626.1|2204343_2206338_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.3	4.4e-21
WP_010930543.1|2206397_2207363_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_010930542.1|2207352_2210214_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
WP_010930541.1|2210216_2210723_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_010930540.1|2210827_2212036_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	30.0	3.8e-36
WP_033446178.1|2212037_2212976_-	membrane protein	NA	NA	NA	NA	NA
WP_010930538.1|2213137_2213611_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|2213607_2214558_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566334.1|2214668_2215109_-	DUF937 domain-containing protein	NA	NA	NA	NA	NA
WP_010930537.1|2215237_2216467_-	lytic murein transglycosylase	NA	NA	NA	NA	NA
WP_004566336.1|2216505_2217327_-	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_029443743.1|2217380_2218532_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930535.1|2218623_2219112_-	DUF1854 domain-containing protein	NA	NA	NA	NA	NA
WP_019247811.1|2221662_2224212_+	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_010930533.1|2224282_2226856_+	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_003813568.1|2227121_2227322_+	CsbD family protein	NA	NA	NA	NA	NA
WP_003813570.1|2227353_2227515_+	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
WP_003813572.1|2227572_2227911_+	BON domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|2228059_2229010_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2229108_2230059_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
NZ_CP012083	Bordetella pertussis strain I751 chromosome, complete genome	4109556	2300735	2364313	4109556	protease,transposase	uncultured_Caudovirales_phage(11.11%)	49	NA	NA
WP_005012067.1|2300735_2301686_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2301784_2302735_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809615.1|2303036_2303513_-	transcription elongation factor GreA	NA	NA	NA	NA	NA
WP_019247142.1|2304136_2305774_+	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	30.2	8.8e-12
WP_003809610.1|2305804_2307118_-	pyrimidine permease	NA	Q9KX94	Enterobacteria_phage	67.1	2.1e-149
WP_004568205.1|2307251_2307569_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023852827.1|2307669_2308992_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|2308988_2309939_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930836.1|2310468_2311491_-	putative 2-aminoethylphosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003820286.1|2311519_2312350_-	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA	NA
WP_029443740.1|2312366_2314064_-	putative 2-aminoethylphosphonate ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010930838.1|2314128_2315205_-	putative 2-aminoethylphosphonate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.8	1.2e-28
WP_010930839.1|2315364_2316228_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930840.1|2316258_2316828_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010930841.1|2316844_2317696_-	sulfurtransferase	NA	NA	NA	NA	NA
WP_003813142.1|2318753_2319635_+|protease	protease HtpX	protease	NA	NA	NA	NA
WP_010930842.1|2319709_2320699_-	quinone oxidoreductase	NA	NA	NA	NA	NA
WP_010930843.1|2320761_2321712_-	DMT family transporter	NA	NA	NA	NA	NA
WP_003813147.1|2321774_2322632_+	DMT family transporter	NA	NA	NA	NA	NA
WP_003813149.1|2322691_2323180_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930844.1|2324752_2325943_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_010930845.1|2325939_2327526_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_010930846.1|2327544_2328612_-	tartrate dehydrogenase	NA	NA	NA	NA	NA
WP_010930847.1|2328716_2330261_-	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	25.4	3.1e-14
WP_010930848.1|2330680_2332255_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930849.1|2332362_2333379_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003813165.1|2333375_2334215_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930850.1|2334219_2335857_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	3.6e-21
WP_005013747.1|2335853_2336804_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268683.1|2336821_2336965_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930851.1|2336946_2338221_+	4-aminobutyrate--2-oxoglutarate transaminase	NA	A0A1V0SKB7	Klosneuvirus	27.9	1.6e-24
WP_010930852.1|2338250_2338541_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_047122810.1|2338613_2339627_+	histone deacetylase family protein	NA	A0A2K9L4C2	Tupanvirus	35.2	1.7e-42
WP_010930854.1|2339646_2340909_+	Zn-dependent hydrolase	NA	NA	NA	NA	NA
WP_010930855.1|2340911_2341835_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010930856.1|2341831_2343325_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930857.1|2343335_2344268_-	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA	NA
WP_076879554.1|2344449_2345775_+	aspartate aminotransferase family protein	NA	A0A1C9EHH3	Mycobacterium_phage	22.5	1.8e-07
WP_023853659.1|2345809_2347153_-	sodium:alanine symporter family protein	NA	NA	NA	NA	NA
WP_023853666.1|2347225_2348746_-	DUF853 domain-containing protein	NA	A0A248XCZ8	Klebsiella_phage	44.9	1.7e-78
WP_010930861.1|2348900_2349632_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_010930862.1|2349699_2351040_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_010930863.1|2351055_2351967_+	oxygen-dependent coproporphyrinogen oxidase	NA	NA	NA	NA	NA
WP_010930864.1|2351957_2352551_+	nicotinate (nicotinamide) nucleotide adenylyltransferase	NA	NA	NA	NA	NA
WP_003813196.1|2352612_2352999_+	ribosome silencing factor	NA	NA	NA	NA	NA
WP_003813199.1|2353010_2353481_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
WP_010930865.1|2353492_2354116_+	septum formation inhibitor Maf	NA	NA	NA	NA	NA
WP_010930866.1|2354136_2356884_-	autotransporter Vag8	NA	NA	NA	NA	NA
WP_005012808.1|2363362_2364313_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
NZ_CP012083	Bordetella pertussis strain I751 chromosome, complete genome	4109556	2510303	2565783	4109556	tRNA,transposase	Planktothrix_phage(40.0%)	51	NA	NA
WP_005012067.1|2510303_2511254_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930388.1|2511733_2512390_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA	NA
WP_010930387.1|2512404_2514072_-	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_010930386.1|2514074_2514704_-	TRAP transporter small permease subunit	NA	NA	NA	NA	NA
WP_014486072.1|2514915_2516010_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930384.1|2516154_2516967_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_023853502.1|2516970_2518674_-	FimV N-terminal domain protein	NA	NA	NA	NA	NA
WP_010930382.1|2518724_2519855_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930381.1|2520041_2521118_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_010930380.1|2521199_2521850_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_010930379.1|2521864_2523268_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
WP_004567445.1|2523551_2524370_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930378.1|2524366_2525071_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.0	2.6e-13
WP_010930377.1|2525970_2527086_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_004567447.1|2527119_2527494_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930376.1|2527516_2528674_-	formate dehydrogenase subunit gamma	NA	NA	NA	NA	NA
WP_003812666.1|2528686_2528920_-	lipoprotein	NA	NA	NA	NA	NA
WP_019247523.1|2529554_2532524_-	formate dehydrogenase subunit alpha	NA	NA	NA	NA	NA
WP_023853518.1|2532538_2532748_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248667.1|2532899_2533529_-	molecular chaperone TorD family protein	NA	NA	NA	NA	NA
WP_010930373.1|2533525_2535616_-	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_010930372.1|2535639_2536320_-	DUF3306 domain-containing protein	NA	NA	NA	NA	NA
WP_003820494.1|2536316_2536877_-	DUF3305 domain-containing protein	NA	NA	NA	NA	NA
WP_004567450.1|2536883_2537981_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010930371.1|2538133_2538727_+	molybdenum cofactor guanylyltransferase MobA	NA	NA	NA	NA	NA
WP_010930370.1|2538723_2540016_+	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_003812685.1|2540029_2540572_+	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA	NA
WP_010930369.1|2540581_2541418_-	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003820487.1|2541451_2542513_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	42.8	2.9e-80
WP_019247210.1|2542554_2543607_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_019247209.1|2543622_2543925_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|2544066_2545017_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268680.1|2545034_2545199_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930368.1|2545195_2546890_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003809599.1|2546886_2547972_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	6.4e-27
WP_010930367.1|2548019_2548919_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003809593.1|2548929_2549574_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_010930366.1|2550595_2553838_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_023852833.1|2553848_2555003_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.4	3.3e-53
WP_010930364.1|2555229_2556192_+	transaldolase	NA	H6WFR1	Cyanophage	29.2	7.5e-11
WP_076879624.1|2556290_2557241_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930363.1|2557339_2558290_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2558388_2559339_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930362.1|2559348_2560038_-	VIT family protein	NA	NA	NA	NA	NA
WP_003811741.1|2560097_2560535_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003811743.1|2560580_2561474_-	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003811746.1|2561521_2562694_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003811748.1|2562690_2563845_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003811750.1|2564041_2564392_-	RnfH family protein	NA	NA	NA	NA	NA
WP_003811752.1|2564381_2564816_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_010930800.1|2564832_2565783_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NZ_CP012083	Bordetella pertussis strain I751 chromosome, complete genome	4109556	2881438	2962716	4109556	tRNA,transposase,protease	Planktothrix_phage(16.67%)	60	NA	NA
WP_005012067.1|2881438_2882389_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813621.1|2882385_2883288_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930206.1|2883375_2884134_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_023853245.1|2884146_2885238_-	cell division protein ZapE	NA	NA	NA	NA	NA
WP_003813626.1|2885335_2886763_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	2.1e-41
WP_010930204.1|2886992_2888207_-	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_003813631.1|2888252_2891123_-	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_010930202.1|2893533_2894022_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930201.1|2894147_2896844_+	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA	NA
WP_010930200.1|2896998_2899281_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_019248935.1|2899456_2900080_+	serotype 2 fimbrial subunit	NA	NA	NA	NA	NA
WP_010930198.1|2900178_2901129_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812405.1|2901175_2901730_-	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_003816844.1|2901797_2902643_-	PHP domain-containing protein	NA	NA	NA	NA	NA
WP_019248398.1|2902712_2903681_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_023995083.1|2903680_2904544_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010930196.1|2907376_2911303_-	inverse autotransporter beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_010930194.1|2912038_2915269_-	autotransporter SphB3	NA	NA	NA	NA	NA
WP_010928340.1|2915550_2916378_-	TatD family hydrolase	NA	NA	NA	NA	NA
WP_003812422.1|2916411_2917107_-	lipoprotein-releasing ABC transporter ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	38.6	7.0e-35
WP_019247537.1|2917099_2918380_-	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010930192.1|2918389_2919367_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930191.1|2919348_2921049_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.3	1.3e-50
WP_010926448.1|2921151_2922255_+	peptide chain release factor 2	NA	NA	NA	NA	NA
WP_010926447.1|2922285_2923041_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930190.1|2923047_2924568_+|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
WP_010930189.1|2924610_2924913_+	membrane protein	NA	NA	NA	NA	NA
WP_003812436.1|2924909_2925542_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930188.1|2925620_2927486_-	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
WP_020699602.1|2927482_2928277_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.3	1.2e-11
WP_010930186.1|2928305_2929421_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930185.1|2930325_2931204_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930184.1|2931203_2932028_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
WP_010929591.1|2932195_2933146_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930183.1|2933358_2936208_+	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010930182.1|2936189_2936918_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_019248549.1|2937058_2938522_-	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
WP_010930180.1|2938518_2938890_-	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
WP_003812701.1|2938907_2940221_+	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_003812703.1|2940257_2940716_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_155120815.1|2940670_2940811_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930178.1|2941774_2942788_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_003812707.1|2942927_2943914_+	homoserine kinase	NA	NA	NA	NA	NA
WP_161633091.1|2944272_2944980_-	DUF192 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|2945560_2946511_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809618.1|2946662_2947265_-	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_010930175.1|2947283_2947916_+	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
WP_162096758.1|2947960_2948212_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930174.1|2948153_2950040_+|protease	ATP-dependent zinc metalloprotease FtsH	protease	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
WP_010930173.1|2950058_2950901_+	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
WP_003819875.1|2950897_2952256_+	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_003809629.1|2952476_2953271_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930172.1|2953501_2954995_-	exopolyphosphatase	NA	NA	NA	NA	NA
WP_010930171.1|2955230_2957312_+	polyphosphate kinase 1	NA	NA	NA	NA	NA
WP_014486066.1|2957506_2958547_+	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
WP_010930169.1|2958681_2959698_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_003809638.1|2959719_2960577_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_010930167.1|2960621_2961398_+	phosphate ABC transporter ATP-binding protein PstB	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
WP_154698393.1|2961610_2961748_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2961765_2962716_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
NZ_CP012083	Bordetella pertussis strain I751 chromosome, complete genome	4109556	2971784	3020722	4109556	tRNA,transposase,holin	uncultured_Mediterranean_phage(37.5%)	46	NA	NA
WP_003819794.1|2971784_2972198_-|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_003809432.1|2972238_2972556_-	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003809431.1|2972640_2973357_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930160.1|2973620_2975042_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_019248433.1|2975108_2977856_-	pertactin autotransporter	NA	NA	NA	NA	NA
WP_023853536.1|2978188_2979205_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930157.1|2979540_2980182_-	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_003809423.1|2980272_2981709_-	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_023853534.1|2981866_2982940_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_010930155.1|2982936_2984073_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
WP_003809416.1|2984217_2984562_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.4	1.0e-10
WP_010930154.1|2984628_2986509_+	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_003809411.1|2986558_2987494_+	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.5	3.0e-41
WP_010931363.1|2987826_2988843_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_015041211.1|2989780_2991208_+|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010930151.1|2991204_2992227_+	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
WP_003809396.1|2992216_2992690_+	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_010930149.1|2992830_2993718_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_014486064.1|2993714_2995358_+	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_010930148.1|2995354_2996404_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_023853536.1|2997192_2998209_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003817162.1|2998308_2998941_-	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_003811911.1|2998949_2999339_-	chemotaxis response regulator CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
WP_010930146.1|2999391_3000444_-	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_010930145.1|3001307_3003014_-	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
WP_003811919.1|3003087_3003588_-	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_010930144.1|3003602_3005660_-	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_019247393.1|3005686_3005980_-	response regulator	NA	NA	NA	NA	NA
WP_003817154.1|3006081_3007029_-	flagellar motor protein MotB	NA	NA	NA	NA	NA
WP_003811927.1|3007041_3007917_-	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
WP_003811929.1|3008037_3008598_-	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
WP_010930143.1|3008632_3008956_-	flagellar transcriptional regulator FlhD	NA	NA	NA	NA	NA
WP_003811933.1|3009391_3010129_+	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
WP_005012067.1|3010427_3011378_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809486.1|3011621_3011885_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_003819817.1|3011958_3012240_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930142.1|3012256_3013117_-	M23 family metallopeptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
WP_003809479.1|3013113_3013449_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930141.1|3013502_3014153_-	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
WP_019247197.1|3015833_3016778_-	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_003809467.1|3016823_3017141_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930139.1|3017143_3018082_-	DnaJ domain-containing protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
WP_003819814.1|3018259_3018745_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930138.1|3018763_3019312_+	DinB family protein	NA	NA	NA	NA	NA
WP_023994624.1|3019343_3019496_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853531.1|3019588_3020722_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 25
NZ_CP012083	Bordetella pertussis strain I751 chromosome, complete genome	4109556	3032329	3104823	4109556	transposase	Bacillus_virus(16.67%)	58	NA	NA
WP_010929584.1|3032329_3033280_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003817151.1|3033322_3034498_+	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_010930129.1|3034719_3036510_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
WP_010930128.1|3036522_3038184_-	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
WP_010930127.1|3038196_3040902_-	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_003817147.1|3041194_3042949_+	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_010930126.1|3042945_3043572_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003811948.1|3043568_3044420_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
WP_019248379.1|3044495_3046610_+	M3 family metallopeptidase	NA	NA	NA	NA	NA
WP_010930124.1|3046796_3047411_+	SCO family protein	NA	NA	NA	NA	NA
WP_010930123.1|3047556_3047808_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_014486063.1|3047877_3049260_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010930121.1|3049256_3052436_-	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_029443805.1|3053243_3054161_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930119.1|3054212_3054944_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_010926548.1|3055003_3055576_+	chorismate lyase	NA	NA	NA	NA	NA
WP_010929632.1|3057084_3058101_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930118.1|3058238_3059288_-	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
WP_005012067.1|3059392_3060343_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813314.1|3060438_3061164_-	CoA pyrophosphatase	NA	NA	NA	NA	NA
WP_003813315.1|3061374_3061755_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_014905652.1|3062060_3062933_+	EamA family transporter	NA	NA	NA	NA	NA
WP_023852686.1|3062940_3063321_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023852693.1|3063474_3064749_-	PA0069 family radical SAM protein	NA	NA	NA	NA	NA
WP_010930113.1|3066236_3067145_-	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA	NA
WP_010930112.1|3067942_3069007_-	sulfate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.3	3.8e-24
WP_170954292.1|3070843_3071845_-	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003813333.1|3072067_3072709_-	peroxiredoxin	NA	NA	NA	NA	NA
WP_003821527.1|3072791_3074618_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010930111.1|3074861_3075791_-	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA	NA
WP_010930110.1|3075790_3076540_-	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
WP_003821521.1|3076611_3077526_-	histone deacetylase family protein	NA	A0A2K9KZC4	Tupanvirus	34.7	9.8e-45
WP_010930108.1|3077545_3078691_+	lytic murein transglycosylase B	NA	NA	NA	NA	NA
WP_014486062.1|3078751_3079663_-	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	38.8	8.0e-47
WP_005012067.1|3079743_3080694_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446303.1|3080792_3081377_-	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003821513.1|3081411_3082401_-	ADP-glyceromanno-heptose 6-epimerase	NA	E3SJ87	Synechococcus_phage	34.4	2.2e-26
WP_010930105.1|3082397_3083339_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A2H4N7X4	Lake_Baikal_phage	28.1	1.5e-16
WP_010930104.1|3083335_3084556_-	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
WP_010930103.1|3084598_3084913_-	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
WP_010930102.1|3085104_3085464_-	integration host factor subunit beta	NA	NA	NA	NA	NA
WP_010930101.1|3085465_3087181_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_010930100.1|3087368_3088040_-	(d)CMP kinase	NA	NA	NA	NA	NA
WP_010930099.1|3088054_3089383_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_010930098.1|3089379_3090279_-	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010930097.1|3090365_3091451_-	prephenate dehydratase	NA	NA	NA	NA	NA
WP_010930096.1|3091443_3092577_-	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	44.0	6.4e-78
WP_010930095.1|3092576_3095258_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	3.2e-104
WP_010930094.1|3095628_3096210_+	OmpA family protein	NA	NA	NA	NA	NA
WP_010930093.1|3096335_3097061_+	bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase	NA	NA	NA	NA	NA
WP_010930092.1|3097057_3097735_+	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_010930091.1|3097950_3099132_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930090.1|3099904_3100087_+	type II toxin-antitoxin system HicA family toxin	NA	A0A1L2JY37	Aeribacillus_phage	56.1	3.7e-12
WP_005012808.1|3100116_3101067_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566317.1|3101196_3101589_+	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
WP_003821497.1|3101865_3102777_-	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
WP_010930088.1|3102901_3103876_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|3103872_3104823_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
NZ_CP012083	Bordetella pertussis strain I751 chromosome, complete genome	4109556	3118330	3171848	4109556	transposase,holin	Bacillus_phage(33.33%)	44	NA	NA
WP_010930066.1|3118330_3119281_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810839.1|3119393_3119645_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|3120150_3121269_-	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810832.1|3121388_3121601_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930064.1|3121760_3121982_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|3122034_3122985_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930062.1|3124161_3125532_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_010930061.1|3125564_3126356_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930060.1|3126368_3127424_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019247557.1|3127449_3128325_-	amidohydrolase	NA	NA	NA	NA	NA
WP_023852826.1|3128430_3128679_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003819989.1|3128713_3130168_-	carboxylase	NA	NA	NA	NA	NA
WP_004568140.1|3130164_3130686_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_010930057.1|3130714_3132067_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_029444137.1|3132290_3135179_-	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010930056.1|3137323_3138625_+	phospholipase A	NA	NA	NA	NA	NA
WP_010930055.1|3138639_3139356_-	flagellar brake protein	NA	NA	NA	NA	NA
WP_010930054.1|3139637_3140318_+	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_003809770.1|3140329_3140497_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023852837.1|3140605_3140752_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930052.1|3140845_3141505_-	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
WP_010930051.1|3141903_3143736_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
WP_005012067.1|3143732_3144683_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814007.1|3145846_3147562_+	acetolactate synthase 3 catalytic subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.3	3.1e-60
WP_003814006.1|3147572_3148064_+	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_010930015.1|3148136_3149153_+	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_003814004.1|3149320_3150100_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_003814003.1|3150118_3150646_-	lipoprotein	NA	NA	NA	NA	NA
WP_003814002.1|3150939_3151209_+	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_003821234.1|3151299_3153459_+	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_003814000.1|3153579_3154299_+	lipoprotein	NA	NA	NA	NA	NA
WP_005013747.1|3154295_3155246_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813999.1|3155386_3156604_+	threonine ammonia-lyase	NA	NA	NA	NA	NA
WP_010930016.1|3156597_3157209_-	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
WP_003813997.1|3157842_3158820_+	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
WP_003813996.1|3158963_3159710_+	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_010930017.1|3159731_3160178_+	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_010930018.1|3160965_3163197_+|holin	choline BCCT transporter BetT	holin	NA	NA	NA	NA
WP_003813993.1|3163219_3164020_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813992.1|3164301_3165534_+	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003813991.1|3165644_3166634_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930019.1|3166664_3168053_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003813988.1|3169651_3170635_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_023994644.1|3170831_3171848_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 27
NZ_CP012083	Bordetella pertussis strain I751 chromosome, complete genome	4109556	3236306	3306358	4109556	transposase	Klosneuvirus(16.67%)	55	NA	NA
WP_041337087.1|3236306_3237257_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813068.1|3237253_3238273_-	class 1 fructose-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	35.7	1.5e-49
WP_010930049.1|3238282_3240991_-	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	24.0	2.8e-15
WP_010930050.1|3241138_3241795_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|3241893_3242844_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023998705.1|3242991_3243885_+	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_010930013.1|3244084_3245779_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_010930012.1|3245813_3246740_+	VOC family protein	NA	NA	NA	NA	NA
WP_010930011.1|3246808_3247906_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003818996.1|3247924_3248788_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.9	9.6e-34
WP_010930010.1|3248799_3249582_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_004566042.1|3249578_3250697_+	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
WP_010930009.1|3250693_3252226_+	acyl--CoA ligase	NA	NA	NA	NA	NA
WP_003818991.1|3252266_3253274_+	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_023999677.1|3253418_3254141_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930007.1|3254156_3255179_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_010930006.1|3255495_3256230_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930005.1|3256314_3258060_+	acetolactate synthase	NA	NA	NA	NA	NA
WP_010930004.1|3258056_3258809_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930003.1|3258853_3259810_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003818983.1|3259898_3260465_+	membrane protein	NA	NA	NA	NA	NA
WP_010930002.1|3260472_3261333_-	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_020699739.1|3261362_3262091_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.4	3.4e-32
WP_003807497.1|3262122_3262806_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010930000.1|3263643_3264558_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929999.1|3264622_3265531_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929998.1|3265621_3267046_-	TolC family protein	NA	NA	NA	NA	NA
WP_010929997.1|3267047_3268370_-	cyclolysin T1SS periplasmic adaptor subunit CyaD	NA	NA	NA	NA	NA
WP_010929996.1|3268366_3270505_-	cyclolysin T1SS permease/ATPase CyaB	NA	W8CYL7	Bacillus_phage	29.2	2.7e-45
WP_010929995.1|3270582_3275703_-	bifunctional adenylate cyclase toxin/hemolysin CyaA	NA	NA	NA	NA	NA
WP_153302771.1|3275803_3276112_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929994.1|3276181_3276739_+	cyclolysin-activating lysine-acyltransferase	NA	NA	NA	NA	NA
WP_010929993.1|3276754_3278236_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010929992.1|3280406_3281744_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_010929991.1|3281778_3283776_-	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010929990.1|3283793_3285842_-	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010929989.1|3285972_3286839_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929988.1|3287107_3288073_-	octaprenyl diphosphate synthase	NA	NA	NA	NA	NA
WP_010929987.1|3288187_3289336_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_003807462.1|3289760_3290072_+	50S ribosomal protein L21	NA	NA	NA	NA	NA
WP_003807460.1|3290105_3290366_+	50S ribosomal protein L27	NA	NA	NA	NA	NA
WP_003807459.1|3290515_3291649_+	GTPase ObgE	NA	NA	NA	NA	NA
WP_003807457.1|3291719_3292856_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	44.8	5.8e-63
WP_010925762.1|3293021_3293816_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003807452.1|3293878_3294322_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|3294437_3295388_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929985.1|3295489_3295918_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929984.1|3295990_3298186_+	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|3298407_3299358_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|3299456_3300407_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852739.1|3300366_3300891_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_003814467.1|3301022_3301994_+	FecR family protein	NA	NA	NA	NA	NA
WP_010929983.1|3302113_3304558_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_010929982.1|3304573_3305164_-	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|3305407_3306358_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 28
NZ_CP012083	Bordetella pertussis strain I751 chromosome, complete genome	4109556	3321806	3421919	4109556	protease,terminase,tRNA,transposase,tail	uncultured_Caudovirales_phage(14.29%)	108	NA	NA
WP_005012067.1|3321806_3322757_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814437.1|3323488_3323866_+	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_003814436.1|3323850_3324552_-	membrane protein	NA	NA	NA	NA	NA
WP_010931409.1|3324695_3325388_-	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_010931410.1|3325387_3326491_-	phosphotransferase	NA	NA	NA	NA	NA
WP_010931411.1|3326600_3328973_+	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931412.1|3328969_3330529_+	chaperone SurA	NA	NA	NA	NA	NA
WP_010931413.1|3330553_3331351_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931414.1|3331382_3332528_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_003814419.1|3332632_3334075_+	pyruvate kinase	NA	NA	NA	NA	NA
WP_010929184.1|3334077_3335307_-	spore maturation protein	NA	NA	NA	NA	NA
WP_005012808.1|3337444_3338395_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247922.1|3339524_3340082_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247923.1|3340057_3340408_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814657.1|3340576_3341371_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
WP_010931416.1|3341367_3342417_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003814652.1|3342416_3343106_-	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_003814650.1|3343192_3343690_-	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_010931417.1|3343721_3345038_-	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_010931418.1|3345054_3346029_-	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_003814643.1|3346065_3346524_-	protein TolR	NA	NA	NA	NA	NA
WP_003814641.1|3346523_3347204_-	protein TolQ	NA	NA	NA	NA	NA
WP_010931419.1|3347206_3347635_-	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814636.1|3347687_3349418_-|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
WP_003814635.1|3349483_3350056_+	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_010931420.1|3350036_3350723_+	response regulator	NA	NA	NA	NA	NA
WP_010931421.1|3351078_3351750_+	SOS response-associated peptidase	NA	Q5QF62	Pseudomonas_virus	39.9	4.7e-36
WP_010931422.1|3352078_3352300_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010926433.1|3352299_3352581_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931423.1|3352577_3353093_-	DUF2514 family protein	NA	NA	NA	NA	NA
WP_010931424.1|3353092_3353644_-	lysozyme	NA	NA	NA	NA	NA
WP_010931425.1|3353622_3353865_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931426.1|3353869_3354682_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926428.1|3354681_3354945_-	hypothetical protein	NA	NA	NA	NA	NA
WP_124740660.1|3354985_3355183_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931428.1|3355163_3355580_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931429.1|3355584_3359541_-	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
WP_010931430.1|3359533_3359923_-	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931431.1|3359919_3360453_-	DUF1833 family protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931432.1|3360520_3360880_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931433.1|3360889_3363502_-|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931434.1|3363527_3363818_-	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_003813412.1|3363835_3364165_-|tail	phage tail assembly chaperone	tail	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931435.1|3364174_3364693_-|tail	phage tail protein	tail	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_010931436.1|3364947_3365448_-	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931437.1|3365455_3365878_-	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_010931438.1|3365874_3366273_-	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931439.1|3366269_3366665_-	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_010931440.1|3366664_3366865_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|3366866_3367349_-	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_010931442.1|3367411_3367663_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|3368337_3369288_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931443.1|3369716_3370319_-	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_010931444.1|3370441_3370684_-	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931445.1|3370689_3371745_-	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931446.1|3371773_3373192_-	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931447.1|3373194_3374472_-|terminase	terminase large subunit	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_019247942.1|3374458_3374944_-|transposase	transposase	transposase	C7U0W1	Enterobacteria_phage	61.5	7.3e-39
WP_005012067.1|3375583_3376534_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853183.1|3376551_3376773_+	hypothetical protein	NA	NA	NA	NA	NA
WP_161633094.1|3376790_3377480_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853179.1|3377472_3377724_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931451.1|3378278_3378890_+	S24 family peptidase	NA	NA	NA	NA	NA
WP_019247378.1|3378961_3379168_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3379419_3380370_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248926.1|3380468_3381542_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931475.1|3381709_3382504_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010925795.1|3382543_3383068_-	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931474.1|3383060_3384803_-	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010931473.1|3385012_3385771_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931472.1|3385773_3386481_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931471.1|3386497_3387379_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_019247734.1|3387389_3388148_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_019248554.1|3388116_3388872_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931468.1|3388941_3390360_+	amidase	NA	NA	NA	NA	NA
WP_003819076.1|3390381_3391032_-	carbonic anhydrase	NA	NA	NA	NA	NA
WP_033446132.1|3391165_3391501_-	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_010930800.1|3391589_3392540_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931467.1|3392616_3394437_+	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_010931466.1|3394441_3395515_-	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_003814230.1|3395637_3396606_+	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010927008.1|3396679_3397591_+	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814226.1|3397609_3398182_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010931465.1|3398262_3398811_-	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_010931464.1|3398810_3400400_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_003814221.1|3400469_3400709_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_023995141.1|3400749_3401775_-|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814217.1|3401840_3403022_-	UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase	NA	NA	NA	NA	NA
WP_010931463.1|3403118_3403571_+	membrane protein	NA	NA	NA	NA	NA
WP_010931462.1|3403580_3404921_-	aminopeptidase P N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010931461.1|3405237_3406275_+	sodium:calcium antiporter	NA	NA	NA	NA	NA
WP_003814209.1|3406656_3407016_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041166340.1|3407099_3408041_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879617.1|3408115_3409066_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814206.1|3409359_3410454_+	porin	NA	NA	NA	NA	NA
WP_003814205.1|3410535_3411417_+	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814203.1|3411438_3412278_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_010931459.1|3412353_3413871_+|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_010931458.1|3413967_3415068_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931457.1|3415084_3415507_-	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_003814195.1|3415529_3415742_-	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931456.1|3415788_3416709_-	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_010931455.1|3416891_3417641_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_003814188.1|3417643_3417973_+	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_010931454.1|3418179_3419613_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	1.5e-52
WP_003814185.1|3419624_3420008_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_010931453.1|3420069_3420870_+	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_005015810.1|3420968_3421919_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 30
NZ_CP012083	Bordetella pertussis strain I751 chromosome, complete genome	4109556	4031727	4085159	4109556	transposase	Planktothrix_phage(40.0%)	46	NA	NA
WP_010931661.1|4031727_4032678_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931662.1|4032847_4034074_+	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA	NA	NA	NA	NA
WP_010931663.1|4034273_4035140_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_003815027.1|4035132_4036095_+	Nudix family hydrolase	NA	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	53.4	1.9e-06
WP_010927663.1|4036195_4037146_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|4037244_4038195_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|4038293_4039244_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994937.1|4039240_4040734_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_003815032.1|4040730_4043838_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931665.1|4043834_4046903_-	MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931666.1|4046899_4048150_-	MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_003815038.1|4048330_4049092_-	cell division protein ZapD	NA	NA	NA	NA	NA
WP_019247320.1|4049124_4049775_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_003820519.1|4049777_4050617_-	prepilin peptidase	NA	NA	NA	NA	NA
WP_003815047.1|4050857_4051601_+	copper resistance protein NlpE N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_003815049.1|4051683_4052031_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003815051.1|4052128_4052971_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_003815053.1|4053015_4053903_-	segregation/condensation protein A	NA	NA	NA	NA	NA
WP_003815055.1|4053929_4054118_-	DUF3460 family protein	NA	NA	NA	NA	NA
WP_010931669.1|4054215_4055673_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_010931670.1|4055659_4057186_+	glycerol kinase GlpK	NA	NA	NA	NA	NA
WP_003815061.1|4057204_4057672_-	CopD family protein	NA	NA	NA	NA	NA
WP_010931671.1|4057671_4058694_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_169507388.1|4058814_4059534_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.9	4.7e-34
WP_003815066.1|4059609_4060710_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815068.1|4060711_4061902_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815070.1|4062021_4063038_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	42.1	1.0e-71
WP_003815073.1|4063356_4064028_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	38.2	9.5e-29
WP_010927126.1|4064024_4064933_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_010931672.1|4065144_4065792_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA	NA
WP_010931673.1|4069643_4070720_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
WP_003815084.1|4070730_4071540_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815086.1|4071629_4072403_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_023853189.1|4072403_4072568_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853639.1|4072585_4073536_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077598841.1|4073424_4074447_+	CoA transferase	NA	NA	NA	NA	NA
WP_010931674.1|4074436_4075591_+	CoA transferase	NA	NA	NA	NA	NA
WP_010931675.1|4075630_4077043_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_019247370.1|4077167_4078034_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931677.1|4078035_4078860_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_023853488.1|4078856_4079618_+	nitroreductase	NA	M1I6Q5	Acanthocystis_turfacea_Chlorella_virus	31.0	2.0e-19
WP_003808010.1|4079698_4080385_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931679.1|4080558_4081566_+	hydroxymethylglutaryl-CoA lyase	NA	NA	NA	NA	NA
WP_003819309.1|4081562_4082342_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931680.1|4082399_4083662_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929591.1|4084208_4085159_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
