The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP012130	Bordetella pertussis strain H639 chromosome, complete genome	4088698	0	63965	4088698	transposase,tRNA	Natrialba_phage(11.11%)	57	NA	NA
WP_010929569.1|0_1920_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
WP_003806878.1|1916_2609_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA	NA
WP_003806879.1|2605_3403_+	ParA family protein	NA	Q8JL10	Natrialba_phage	34.9	5.6e-20
WP_010929570.1|3409_4171_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010929571.1|4214_5132_+	ParB/RepB/Spo0J family partition protein	NA	I3NLC2	Bifidobacterium_phage	38.1	1.9e-16
WP_019247667.1|5124_5910_+	asparaginase	NA	NA	NA	NA	NA
WP_019247666.1|5943_6126_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003806883.1|6721_7912_+	elongation factor Tu	NA	A0A1V0SLW6	Klosneuvirus	29.2	3.1e-14
WP_003806884.1|8150_8531_+	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
WP_003806885.1|8540_9074_+	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	30.5	1.4e-11
WP_010929572.1|9137_9569_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
WP_003806887.1|9571_10270_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
WP_003806888.1|10512_11037_+	50S ribosomal protein L10	NA	NA	NA	NA	NA
WP_003806889.1|11118_11502_+	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
WP_010929573.1|11661_15774_+	DNA-directed RNA polymerase subunit beta	NA	A0A0N9R0J7	Chrysochromulina_ericina_virus	28.8	2.4e-21
WP_003818292.1|15773_20018_+	DNA-directed RNA polymerase subunit beta'	NA	A0A2I7QNZ7	Vibrio_phage	24.7	3.5e-68
WP_010929574.1|20126_20531_-	TssQ family T6SS-associated lipoprotein	NA	NA	NA	NA	NA
WP_010929575.1|20771_21947_+	membrane protein	NA	NA	NA	NA	NA
WP_010929576.1|24352_25459_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
WP_003818297.1|26470_27286_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_010930363.1|27282_28233_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995007.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929578.1|28674_29109_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247164.1|29141_30359_-	thiolase family protein	NA	NA	NA	NA	NA
WP_010929580.1|30364_30862_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_019247165.1|31069_32005_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929582.1|32214_33006_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929583.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010929584.1|34625_35576_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814398.1|35572_36763_-	MFS transporter	NA	NA	NA	NA	NA
WP_010929585.1|37012_37924_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010929586.1|37925_40064_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003814404.1|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|41318_42212_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247766.1|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|42687_43218_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_023852754.1|43346_43646_-	DUF1974 domain-containing protein	NA	NA	NA	NA	NA
WP_010929588.1|43663_44614_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929589.1|45200_45749_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|45720_45957_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|46084_46978_+	membrane protein	NA	NA	NA	NA	NA
WP_010929590.1|48147_49395_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|49391_50006_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_010929591.1|50141_51092_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443813.1|51134_52391_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|53622_54357_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|54362_54953_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|54977_55667_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|55663_56425_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|56504_57404_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|57497_58448_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|58546_59497_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003815027.1|59597_60560_-	Nudix family hydrolase	NA	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	53.4	1.9e-06
WP_010931663.1|60552_61419_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_010931662.1|61618_62845_-	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA	NA	NA	NA	NA
WP_010931661.1|63014_63965_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP012130	Bordetella pertussis strain H639 chromosome, complete genome	4088698	248776	323120	4088698	transposase	uncultured_Mediterranean_phage(15.38%)	54	NA	NA
WP_010929591.1|248776_249727_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931563.1|249723_250914_-	voltage-gated potassium channel protein	NA	NA	NA	NA	NA
WP_010931562.1|251035_251800_-	phytanoyl-CoA dioxygenase	NA	NA	NA	NA	NA
WP_003807735.1|251886_252990_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_010931561.1|253181_254198_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815102.1|254479_254968_+	D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase	NA	A0A1B1IUK5	uncultured_Mediterranean_phage	34.1	1.6e-17
WP_003817656.1|256311_256992_-	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	34.8	3.5e-15
WP_010931560.1|257053_257905_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_010931559.1|257901_258699_-	thiazole synthase	NA	NA	NA	NA	NA
WP_010931558.1|258802_259696_-	cobalamin-binding protein	NA	NA	NA	NA	NA
WP_010931557.1|259707_261597_-	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	30.8	7.6e-07
WP_010931556.1|261933_265707_+	methionine synthase	NA	A0A140XBC7	Dickeya_phage	50.8	8.6e-10
WP_010929591.1|265703_266654_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929826.1|266962_267655_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	41.6	6.3e-36
WP_003818232.1|268028_268529_-	SET domain-containing protein	NA	NA	NA	NA	NA
WP_023853391.1|268635_269556_+	bestrophin	NA	NA	NA	NA	NA
WP_010929823.1|269572_270049_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929822.1|270142_271993_+	biosynthetic-type acetolactate synthase large subunit	NA	E4WLQ6	Ostreococcus_tauri_virus	30.4	2.2e-59
WP_010929821.1|272048_272807_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929820.1|272834_274268_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003818225.1|274341_275121_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929819.1|275133_275967_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_020699616.1|275975_276746_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.9	8.1e-24
WP_010929818.1|276745_277810_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929817.1|277961_280589_-	DNA topoisomerase III	NA	A0A0G2YA05	Acanthamoeba_polyphaga_mimivirus	25.4	6.1e-23
WP_010929816.1|280652_283274_+	DUF4401 domain-containing protein	NA	NA	NA	NA	NA
WP_003815964.1|284201_284660_-	DUF494 domain-containing protein	NA	NA	NA	NA	NA
WP_010929815.1|284938_287182_-	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA	NA
WP_010929814.1|287378_289403_-	TRAP transporter permease	NA	NA	NA	NA	NA
WP_010929813.1|289526_290489_-	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010929812.1|290700_291840_+	DSD1 family PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_010929811.1|291862_292828_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_004565905.1|293023_294214_+	acetylornithine transaminase	NA	A0A1V0SKB7	Klosneuvirus	26.7	4.4e-21
WP_003815955.1|294227_294473_+	DUF1653 domain-containing protein	NA	NA	NA	NA	NA
WP_010929810.1|294501_296523_-	acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha	NA	NA	NA	NA	NA
WP_003815953.1|296569_298177_-	methylcrotonoyl-CoA carboxylase	NA	A0A1B2ITV7	Pike_perch_iridovirus	57.3	5.4e-22
WP_010929808.1|298277_299447_-	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_005012067.1|302328_303279_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929807.1|303302_304361_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_003818201.1|304435_304810_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|305364_306315_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929833.1|307871_308717_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929834.1|308804_309968_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010929835.1|310386_311358_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929836.1|311396_312824_-	amidase	NA	NA	NA	NA	NA
WP_023853625.1|312943_313735_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929838.1|313853_316307_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	34.8	2.3e-112
WP_010929839.1|316401_317511_-	DNA polymerase III subunit beta	NA	B4UTW9	Rhizobium_phage	32.6	1.2e-41
WP_010929554.1|317513_318923_-	chromosomal replication initiator protein DnaA	NA	NA	NA	NA	NA
WP_003816025.1|319328_319463_+	50S ribosomal protein L34	NA	NA	NA	NA	NA
WP_003816026.1|319558_319930_+	ribonuclease P protein component	NA	NA	NA	NA	NA
WP_003816027.1|319926_320199_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	52.2	7.0e-15
WP_010927254.1|320247_321939_+	membrane protein insertase YidC	NA	NA	NA	NA	NA
WP_005012067.1|322169_323120_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP012130	Bordetella pertussis strain H639 chromosome, complete genome	4088698	626353	687544	4088698	protease,transposase	uncultured_Mediterranean_phage(40.0%)	55	NA	NA
WP_005013747.1|626353_627304_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446133.1|627779_628670_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_010931496.1|628666_629488_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_019247235.1|629687_630179_+	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_019247236.1|630197_631271_+	CHAD domain-containing protein	NA	NA	NA	NA	NA
WP_023853086.1|631317_632421_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
WP_003808577.1|632496_633117_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_003808574.1|633137_633647_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	42.1	1.2e-28
WP_003808570.1|633701_633953_+	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	53.4	1.6e-18
WP_010931494.1|634016_635150_+	benzoate/H(+) symporter BenE family transporter	NA	NA	NA	NA	NA
WP_003808567.1|635157_635544_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931493.1|635540_638060_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003808563.1|638488_638827_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003808562.1|638823_639330_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_010931492.1|639391_640192_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931491.1|640302_641244_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931490.1|641337_642873_-	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931489.1|644552_646403_-	dipeptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.2	1.6e-17
WP_003808549.1|646406_647240_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931488.1|647239_648181_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931487.1|648432_649404_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931486.1|649545_651834_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003808542.1|652140_653049_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010931485.1|653103_654069_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931484.1|654143_655805_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_010931483.1|655876_656587_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|656735_657686_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814152.1|658384_658768_+	membrane protein	NA	NA	NA	NA	NA
WP_010927005.1|658825_659428_+	DUF2946 family protein	NA	NA	NA	NA	NA
WP_003820995.1|659445_659847_-	DoxX family protein	NA	NA	NA	NA	NA
WP_010931482.1|659962_660874_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931481.1|660870_661452_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_003814165.1|662246_662981_+	arginyltransferase	NA	NA	NA	NA	NA
WP_010931480.1|663021_664071_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_003814172.1|664218_664797_-	TIGR01841 family phasin	NA	NA	NA	NA	NA
WP_010931479.1|665183_666161_+	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA	NA
WP_010931478.1|666254_670649_-	dermonecrotic toxin	NA	NA	NA	NA	NA
WP_003814178.1|670849_671698_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931477.1|671856_672669_-	competence/damage-inducible protein A	NA	NA	NA	NA	NA
WP_005015810.1|672724_673675_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931453.1|673773_674574_-	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_003814185.1|674635_675019_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_033446148.1|675030_676383_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	2.1e-51
WP_003814188.1|676670_677000_-	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_010931455.1|677002_677752_-	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010931456.1|677934_678855_+	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_003814195.1|678901_679114_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931457.1|679136_679559_+	SnoaL-like domain-containing protein	NA	NA	NA	NA	NA
WP_010931458.1|679575_680676_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931459.1|680772_682290_-|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_003814203.1|682365_683205_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_033446149.1|683226_684099_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814206.1|684189_685284_-	porin	NA	NA	NA	NA	NA
WP_076879617.1|685577_686528_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166340.1|686602_687544_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP012130	Bordetella pertussis strain H639 chromosome, complete genome	4088698	692868	739059	4088698	tail,terminase,transposase,tRNA	uncultured_Caudovirales_phage(18.18%)	50	NA	NA
WP_023995141.1|692868_693894_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814221.1|693934_694174_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931464.1|694243_695833_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_010931465.1|695832_696381_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_003814226.1|696461_697034_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010927008.1|697052_697964_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814230.1|698037_699006_-	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010931466.1|699128_700202_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_010931467.1|700206_702027_-	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_010930800.1|702103_703054_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446132.1|703142_703478_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_003819076.1|703611_704262_+	carbonic anhydrase	NA	NA	NA	NA	NA
WP_010931468.1|704283_705702_-	amidase	NA	NA	NA	NA	NA
WP_019248554.1|705771_706527_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247734.1|706495_707254_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931471.1|707264_708146_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931472.1|708162_708870_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931473.1|708872_709631_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931474.1|709840_711583_+	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010925795.1|711575_712100_+	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931475.1|712139_712934_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248926.1|713101_714175_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931532.1|714273_715224_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247378.1|715475_715682_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931451.1|715753_716365_-	S24 family peptidase	NA	NA	NA	NA	NA
WP_023853179.1|716919_717171_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_161633094.1|717163_717853_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|718109_719060_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247942.1|719699_720185_+|transposase	transposase	transposase	C7U0W1	Enterobacteria_phage	61.5	7.3e-39
WP_010931447.1|720171_721449_+|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_010931446.1|721451_722870_+	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931445.1|722898_723954_+	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931444.1|723959_724202_+	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931443.1|724324_724927_+	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_005012808.1|725355_726306_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931442.1|726980_727232_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|727294_727777_+	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_162096760.1|727790_727979_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931439.1|727978_728374_+	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_010931438.1|728370_728769_+	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931437.1|728765_729188_+	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_010931436.1|729195_729696_+	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931435.1|729950_730469_+	hypothetical protein	NA	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_003813412.1|730478_730808_+	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931434.1|730825_731116_+	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_010931433.1|731141_733754_+|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931432.1|733763_734123_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931431.1|734190_734724_+	DUF1833 family protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931430.1|734720_735110_+	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931429.1|735102_739059_+	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
>prophage 6
NZ_CP012130	Bordetella pertussis strain H639 chromosome, complete genome	4088698	745225	799155	4088698	transposase,tRNA	Planktothrix_phage(50.0%)	46	NA	NA
WP_003814636.1|745225_746956_+|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
WP_010931419.1|747008_747437_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814641.1|747439_748120_+	protein TolQ	NA	NA	NA	NA	NA
WP_003814643.1|748119_748578_+	protein TolR	NA	NA	NA	NA	NA
WP_010931418.1|748614_749589_+	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_010931417.1|749605_750922_+	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_003814650.1|750953_751451_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_003814652.1|751537_752227_+	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_010931416.1|752226_753276_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003814657.1|753272_754067_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
WP_019247923.1|754235_754586_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247922.1|754561_755119_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012808.1|756248_757199_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929184.1|759336_760566_+	spore maturation protein	NA	NA	NA	NA	NA
WP_003814419.1|760568_762011_-	pyruvate kinase	NA	NA	NA	NA	NA
WP_010931414.1|762115_763261_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_010931413.1|763292_764090_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931412.1|764114_765674_-	chaperone SurA	NA	NA	NA	NA	NA
WP_010931411.1|765670_768043_-	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931410.1|768152_769256_+	phosphotransferase	NA	NA	NA	NA	NA
WP_010931409.1|769255_769948_+	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_003814436.1|770091_770793_+	membrane protein	NA	NA	NA	NA	NA
WP_003814437.1|770777_771155_-	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_005012067.1|771886_772837_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814441.1|772996_773869_-	oxaloacetate decarboxylase	NA	NA	NA	NA	NA
WP_003814443.1|774209_774428_+	DUF1059 domain-containing protein	NA	NA	NA	NA	NA
WP_019247242.1|774467_775847_-	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_010929976.1|775888_777286_-	amidase family protein	NA	NA	NA	NA	NA
WP_010927038.1|777325_778978_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.8	6.0e-16
WP_010929977.1|778981_779866_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929978.1|779865_780807_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929979.1|780885_782505_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929980.1|782671_783487_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814459.1|783554_784124_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931070.1|784124_785075_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814461.1|785729_786827_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_003814462.1|786860_788126_+	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929591.1|788283_789234_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929982.1|789477_790068_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_010929983.1|790083_792528_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_003814467.1|792647_793619_-	FecR family protein	NA	NA	NA	NA	NA
WP_023852739.1|793750_794275_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_005012067.1|794234_795185_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929984.1|795406_797602_-	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_020699729.1|797674_798082_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|798204_799155_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
NZ_CP012130	Bordetella pertussis strain H639 chromosome, complete genome	4088698	921744	989720	4088698	transposase	Bacillus_phage(33.33%)	56	NA	NA
WP_023994644.1|921744_922761_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003813988.1|922957_923941_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930019.1|925539_926928_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003813991.1|926958_927948_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813992.1|928058_929291_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003813993.1|929572_930373_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930018.1|930395_932627_-	BCCT family transporter	NA	NA	NA	NA	NA
WP_010930017.1|933414_933861_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_003813996.1|933882_934629_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_003813997.1|934772_935750_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
WP_010930016.1|936383_936995_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
WP_003813999.1|936988_938206_-	threonine ammonia-lyase	NA	NA	NA	NA	NA
WP_005013747.1|938346_939297_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814000.1|939293_940013_-	lipoprotein	NA	NA	NA	NA	NA
WP_003821234.1|940133_942293_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_003814002.1|942383_942653_-	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_005019401.1|942741_942948_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814003.1|942946_943474_+	lipoprotein	NA	NA	NA	NA	NA
WP_003814004.1|943492_944272_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930015.1|944439_945456_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_003814006.1|945528_946020_-	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_003814007.1|946030_947746_-	acetolactate synthase 3 catalytic subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.3	3.1e-60
WP_005012067.1|948909_949860_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930051.1|949856_951689_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
WP_010930052.1|952087_952747_+	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
WP_010930054.1|953274_953955_-	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_010930055.1|954236_954953_+	flagellar brake protein	NA	NA	NA	NA	NA
WP_010930056.1|954967_956269_-	phospholipase	NA	NA	NA	NA	NA
WP_029444137.1|958413_961302_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010930057.1|961525_962878_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_004568140.1|962906_963428_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_003819989.1|963424_964879_+	carboxylase	NA	NA	NA	NA	NA
WP_023852826.1|964913_965162_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247557.1|965267_966143_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010930060.1|966168_967224_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930061.1|967236_968028_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930062.1|968060_969431_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_010929591.1|970607_971558_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930064.1|971610_971832_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810832.1|971991_972204_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|972323_973442_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810837.1|973538_973754_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810839.1|973947_974199_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930066.1|974311_975262_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810840.1|975258_975642_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_023852913.1|975696_977511_-	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
WP_010930068.1|977660_978488_+	oxidoreductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
WP_010930069.1|978533_979514_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_003810850.1|979510_979723_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810851.1|979719_980901_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_019248496.1|981064_981799_+	serine/threonine protein phosphatase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
WP_010930071.1|981800_984413_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_003810859.1|984548_986462_-	S9 family peptidase	NA	NA	NA	NA	NA
WP_010930072.1|987077_987488_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003810865.1|987585_988671_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_005012067.1|988769_989720_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 8
NZ_CP012130	Bordetella pertussis strain H639 chromosome, complete genome	4088698	1033249	1105766	4088698	transposase,tRNA	Enterococcus_phage(14.29%)	60	NA	NA
WP_005012067.1|1033249_1034200_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930118.1|1034304_1035354_+	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
WP_010929632.1|1035491_1036508_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010926548.1|1038016_1038589_-	chorismate lyase	NA	NA	NA	NA	NA
WP_010930119.1|1038648_1039380_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_029443805.1|1039431_1040349_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930121.1|1041156_1044336_+	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_014486063.1|1044332_1045715_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010930123.1|1045784_1046036_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_010930124.1|1046181_1046796_-	SCO family protein	NA	NA	NA	NA	NA
WP_010930125.1|1046982_1049043_-	M3 family metallopeptidase	NA	NA	NA	NA	NA
WP_003811948.1|1049172_1050024_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
WP_010930126.1|1050020_1050647_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003817147.1|1050643_1052398_-	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_010930127.1|1052690_1055396_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_010930128.1|1055408_1057070_+	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
WP_010930129.1|1057082_1058873_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
WP_003817151.1|1059094_1060270_-	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_010929584.1|1060312_1061263_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930130.1|1061361_1062102_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_010930131.1|1062296_1064333_+	transketolase	NA	NA	NA	NA	NA
WP_010930132.1|1064350_1065361_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_010930133.1|1065478_1066672_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_010930134.1|1066701_1067475_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010930135.1|1067471_1068662_-	acetate kinase	NA	NA	NA	NA	NA
WP_003809454.1|1068687_1069626_-	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_010930136.1|1069622_1071971_-	DUF3141 domain-containing protein	NA	NA	NA	NA	NA
WP_010930137.1|1072125_1072767_-	glutathione transferase	NA	NA	NA	NA	NA
WP_023994624.1|1074096_1074249_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930138.1|1074280_1074829_-	diguanylate cyclase	NA	NA	NA	NA	NA
WP_003819814.1|1074847_1075333_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930139.1|1075510_1076449_+	DnaJ domain-containing protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
WP_003809467.1|1076451_1076769_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247197.1|1076814_1077759_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010930141.1|1079439_1080090_+	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
WP_003809479.1|1080143_1080479_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930142.1|1080475_1081336_+	M23 family metallopeptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
WP_003819817.1|1081352_1081634_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003809486.1|1081707_1081971_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_005012067.1|1082214_1083165_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811933.1|1083463_1084201_-	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
WP_010930143.1|1084636_1084960_+	flagellar transcriptional regulator FlhD	NA	NA	NA	NA	NA
WP_003811929.1|1084994_1085555_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
WP_003811927.1|1085675_1086551_+	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
WP_003817154.1|1086563_1087511_+	flagellar motor protein MotB	NA	NA	NA	NA	NA
WP_019247393.1|1087612_1087906_+	response regulator	NA	NA	NA	NA	NA
WP_010930144.1|1087932_1089990_+	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_003811919.1|1090004_1090505_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_010930145.1|1090578_1092285_+	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
WP_010930146.1|1093148_1094201_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_003811911.1|1094253_1094643_+	chemotaxis protein CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
WP_003817162.1|1094651_1095284_+	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_010931363.1|1095383_1096400_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003819773.1|1097230_1098238_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_014486064.1|1098234_1099878_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_010930149.1|1099874_1100762_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003809396.1|1100902_1101376_-	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_010930151.1|1101365_1102388_-	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
WP_015041211.1|1102384_1103812_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010931363.1|1104749_1105766_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP012130	Bordetella pertussis strain H639 chromosome, complete genome	4088698	1109519	1170546	4088698	transposase,holin,tRNA	Catovirus(20.0%)	52	NA	NA
WP_010930155.1|1109519_1110656_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
WP_023853534.1|1110652_1111726_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_003809423.1|1111883_1113320_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_010930157.1|1113410_1114052_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_010929632.1|1114387_1115404_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_019248433.1|1115736_1118484_+	pertactin autotransporter	NA	NA	NA	NA	NA
WP_010930160.1|1118550_1119972_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_003809431.1|1120235_1120952_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003809432.1|1121036_1121354_+	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003819794.1|1121394_1121808_+|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_010930161.1|1121809_1122169_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853525.1|1122211_1123756_-	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
WP_010930163.1|1123839_1124670_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_010930164.1|1124704_1125859_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_010930165.1|1125901_1126774_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486065.1|1126890_1129179_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003809441.1|1130385_1130850_+	barstar family protein	NA	NA	NA	NA	NA
WP_005013747.1|1130876_1131827_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154698393.1|1131844_1131982_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930167.1|1132194_1132971_-	phosphate ABC transporter ATP-binding protein PstB	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
WP_003809638.1|1133015_1133873_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_010930169.1|1133894_1134911_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_014486066.1|1135045_1136086_-	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
WP_010930171.1|1136280_1138362_-	polyphosphate kinase 1	NA	NA	NA	NA	NA
WP_010930172.1|1138597_1140091_+	exopolyphosphatase	NA	NA	NA	NA	NA
WP_003809629.1|1140321_1141116_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003819875.1|1141336_1142695_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_010930173.1|1142691_1143534_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
WP_010930174.1|1143552_1145439_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
WP_162096758.1|1145380_1145632_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930175.1|1145676_1146309_-	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
WP_003809618.1|1146327_1146930_+	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_005012067.1|1147081_1148032_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_161633091.1|1148612_1149320_+	DUF192 domain-containing protein	NA	NA	NA	NA	NA
WP_003812707.1|1149678_1150665_-	homoserine kinase	NA	NA	NA	NA	NA
WP_010930178.1|1150804_1151818_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_005012067.1|1151814_1152765_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812703.1|1152877_1153336_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003812701.1|1153372_1154686_-	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_010930180.1|1154703_1155075_+	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
WP_019248549.1|1155071_1156535_+	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
WP_010930182.1|1156675_1157404_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_010930183.1|1157385_1160235_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010929591.1|1160447_1161398_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930184.1|1161565_1162390_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
WP_010930185.1|1162389_1163268_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930186.1|1164172_1165288_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_020699602.1|1165316_1166111_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.3	1.2e-11
WP_010930188.1|1166107_1167973_+	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
WP_003812436.1|1168051_1168684_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930189.1|1168680_1168983_-	membrane protein	NA	NA	NA	NA	NA
WP_010930190.1|1169025_1170546_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
>prophage 10
NZ_CP012130	Bordetella pertussis strain H639 chromosome, complete genome	4088698	1188116	1253699	4088698	transposase,tRNA	Erysipelothrix_phage(33.33%)	52	NA	NA
WP_023853221.1|1188116_1189913_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248398.1|1189912_1190881_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816844.1|1190950_1191796_+	PHP domain-containing protein	NA	NA	NA	NA	NA
WP_003812405.1|1191863_1192418_+	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_010930198.1|1192464_1193415_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930199.1|1193513_1194146_-	fimbrial protein	NA	NA	NA	NA	NA
WP_010930200.1|1194309_1196592_-	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_010930201.1|1196746_1199443_-	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA	NA
WP_010930202.1|1199568_1200057_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813631.1|1202467_1205338_+	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_010930204.1|1205383_1206598_+	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_003813626.1|1206827_1208255_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	2.1e-41
WP_023853245.1|1208352_1209444_+	cell division protein ZapE	NA	NA	NA	NA	NA
WP_010930206.1|1209456_1210215_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003813621.1|1210302_1211205_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|1211201_1212152_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930207.1|1212281_1213265_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813618.1|1213319_1214042_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930211.1|1215520_1216876_+|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930212.1|1216956_1219332_-	RNA-binding transcriptional accessory protein	NA	NA	NA	NA	NA
WP_010930213.1|1219496_1221572_+	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	30.0	2.4e-75
WP_033446255.1|1221633_1222428_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_010930214.1|1222535_1223498_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_019247742.1|1223485_1224241_+	peptidoglycan editing factor PgeF	NA	NA	NA	NA	NA
WP_010930216.1|1224348_1225986_+	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA	NA
WP_003813586.1|1226053_1226791_+	acetoacetyl-CoA reductase	NA	NA	NA	NA	NA
WP_003813585.1|1226893_1227469_+	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA	NA
WP_010930217.1|1227641_1228178_+	membrane protein	NA	NA	NA	NA	NA
WP_033451623.1|1228210_1228525_+	cupredoxin domain-containing protein	NA	NA	NA	NA	NA
WP_010930218.1|1228540_1229386_+	membrane protein	NA	NA	NA	NA	NA
WP_003821443.1|1229424_1230804_+	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_003813574.1|1230881_1231763_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_010929956.1|1231861_1232812_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811632.1|1232808_1233219_-	VOC family protein	NA	NA	NA	NA	NA
WP_010930219.1|1233326_1234181_-	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_003811636.1|1234173_1235136_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930220.1|1235181_1236306_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	Q6A202	Oenococcus_phage	28.3	1.5e-31
WP_019247966.1|1236411_1237290_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930222.1|1237414_1238194_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930223.1|1238347_1239769_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930224.1|1240203_1241901_+	sodium:solute symporter family protein	NA	NA	NA	NA	NA
WP_010930225.1|1242127_1243069_-	LD-carboxypeptidase	NA	NA	NA	NA	NA
WP_010930226.1|1243395_1244142_+	aldolase	NA	NA	NA	NA	NA
WP_033446252.1|1244149_1245076_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930228.1|1245197_1246115_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003811660.1|1246154_1247108_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811662.1|1247132_1247711_+	amino acid synthesis family protein	NA	NA	NA	NA	NA
WP_010930229.1|1249384_1249993_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930230.1|1250070_1250424_-	NirD/YgiW/YdeI family stress tolerance protein	NA	NA	NA	NA	NA
WP_010930231.1|1250507_1251497_-	succinylglutamate desuccinylase	NA	NA	NA	NA	NA
WP_076879566.1|1251699_1252650_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853639.1|1252748_1253699_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_CP012130	Bordetella pertussis strain H639 chromosome, complete genome	4088698	1352835	1421322	4088698	transposase	Planktothrix_phage(33.33%)	58	NA	NA
WP_005012808.1|1352835_1353786_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930283.1|1354554_1355193_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_019247793.1|1356082_1356529_+	glutamate racemase	NA	NA	NA	NA	NA
WP_010930284.1|1356610_1357312_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.4	1.3e-17
WP_003811277.1|1357312_1358080_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.4	1.2e-14
WP_010930285.1|1358076_1359315_-	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA	NA
WP_003811272.1|1359314_1360241_-	high-affinity branched-chain amino acid ABC transporter permease LivH	NA	NA	NA	NA	NA
WP_010930286.1|1360343_1361459_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005015810.1|1361474_1362425_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930287.1|1362778_1363360_-	queuosine precursor transporter	NA	A0A2I7SAW6	Vibrio_phage	37.3	9.4e-17
WP_003811267.1|1363356_1364190_-	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
WP_010930288.1|1364400_1365714_+	sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA	NA	NA	NA	NA
WP_003811262.1|1365890_1366772_+	sn-glycerol-3-phosphate ABC transporter permease UgpA	NA	NA	NA	NA	NA
WP_003811259.1|1366791_1367643_+	sn-glycerol-3-phosphate ABC transporter permease UgpE	NA	NA	NA	NA	NA
WP_010930289.1|1367695_1368784_+	sn-glycerol-3-phosphate import ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	31.2	2.2e-19
WP_010930290.1|1368894_1370022_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003811244.1|1370256_1370868_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010929584.1|1370966_1371917_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811293.1|1372138_1372516_-	DUF423 domain-containing protein	NA	NA	NA	NA	NA
WP_003811295.1|1372663_1373161_+	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
WP_010930291.1|1373157_1373685_+	RES family NAD+ phosphorylase	NA	NA	NA	NA	NA
WP_003811298.1|1373818_1374634_+	exported protein	NA	NA	NA	NA	NA
WP_010930292.1|1374646_1375828_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_003811301.1|1375875_1376769_-	phosphatidylserine decarboxylase	NA	NA	NA	NA	NA
WP_010930293.1|1376895_1377366_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930294.1|1377491_1378319_-	DUF3298 domain-containing protein	NA	NA	NA	NA	NA
WP_003811306.1|1378347_1379124_-	lipoate--protein ligase family protein	NA	NA	NA	NA	NA
WP_023852802.1|1379120_1379396_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930295.1|1379410_1379875_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930296.1|1379886_1380588_-	thiol:disulfide oxidoreductase	NA	NA	NA	NA	NA
WP_003811310.1|1380697_1381198_-	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	38.4	4.7e-25
WP_010930297.1|1381280_1382459_-	DUF1501 domain-containing protein	NA	NA	NA	NA	NA
WP_003811313.1|1384086_1384422_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_010930298.1|1384609_1386058_+	CoA transferase	NA	NA	NA	NA	NA
WP_023852799.1|1386115_1386460_+	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	58.4	3.0e-31
WP_003811316.1|1386566_1387106_-	peroxiredoxin	NA	NA	NA	NA	NA
WP_005012067.1|1387198_1388149_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852768.1|1388247_1388655_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247530.1|1388887_1389319_-	BcpO-related WXXGXW repeat protein	NA	NA	NA	NA	NA
WP_010930300.1|1389500_1389905_-	DoxX family protein	NA	NA	NA	NA	NA
WP_010930301.1|1391141_1391465_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247533.1|1391467_1392355_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_003811322.1|1392387_1392813_-	universal stress protein	NA	NA	NA	NA	NA
WP_019247534.1|1392884_1393238_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811324.1|1393477_1393984_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930302.1|1394022_1395354_-	transcriptional regulator PtsJ	NA	NA	NA	NA	NA
WP_003811326.1|1395413_1396229_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_010930303.1|1396225_1397080_+	pyridoxine/pyridoxal/pyridoxamine kinase	NA	NA	NA	NA	NA
WP_010930304.1|1400142_1402686_-	malto-oligosyltrehalose synthase	NA	NA	NA	NA	NA
WP_010930305.1|1404052_1405807_-	malto-oligosyltrehalose trehalohydrolase	NA	NA	NA	NA	NA
WP_010930306.1|1405803_1407924_-	glycogen debranching protein GlgX	NA	NA	NA	NA	NA
WP_010930307.1|1407928_1410124_-	1,4-alpha-glucan branching protein GlgB	NA	NA	NA	NA	NA
WP_010930308.1|1410120_1413462_-	maltose alpha-D-glucosyltransferase	NA	NA	NA	NA	NA
WP_010930208.1|1416264_1417215_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811361.1|1417280_1417460_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247449.1|1417576_1418332_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010930310.1|1418318_1419464_-	DUF3182 family protein	NA	NA	NA	NA	NA
WP_010930208.1|1420371_1421322_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_CP012130	Bordetella pertussis strain H639 chromosome, complete genome	4088698	1481813	1537300	4088698	protease,transposase	Mollivirus(16.67%)	56	NA	NA
WP_005012067.1|1481813_1482764_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811846.1|1483965_1484412_-	flagellar export protein FliJ	NA	NA	NA	NA	NA
WP_019247562.1|1484404_1485880_-	flagellar protein export ATPase FliI	NA	NA	NA	NA	NA
WP_010930338.1|1485876_1486632_-	flagellar assembly protein FliH	NA	NA	NA	NA	NA
WP_003817203.1|1486624_1487635_-	flagellar motor switch protein FliG	NA	NA	NA	NA	NA
WP_010930339.1|1487624_1489301_-	flagellar basal body M-ring protein FliF	NA	NA	NA	NA	NA
WP_010930340.1|1489613_1489946_+	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA	NA
WP_010930341.1|1489959_1490355_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930342.1|1490364_1490691_-	flagellar biosynthesis protein FlhB	NA	NA	NA	NA	NA
WP_019247563.1|1490687_1491014_-	flagellar hook-length control protein FliK	NA	NA	NA	NA	NA
WP_023997203.1|1490940_1491354_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930343.1|1491958_1492309_-	flagellar protein FliT	NA	NA	NA	NA	NA
WP_010930344.1|1492356_1492785_-	flagellar export chaperone FliS	NA	NA	NA	NA	NA
WP_010930345.1|1492792_1494166_-	flagellar filament capping protein FliD	NA	NA	NA	NA	NA
WP_003817216.1|1494306_1494684_-	flagellar protein FlaG	NA	NA	NA	NA	NA
WP_010930346.1|1494946_1496254_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_023852965.1|1496314_1497145_+	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_003811815.1|1497141_1497630_+	CvpA family protein	NA	NA	NA	NA	NA
WP_003811814.1|1497671_1499192_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	43.7	4.8e-97
WP_003811812.1|1499235_1499712_-	disulfide bond formation protein B	NA	NA	NA	NA	NA
WP_010930348.1|1500515_1503113_-	[protein-PII] uridylyltransferase	NA	NA	NA	NA	NA
WP_003811806.1|1503142_1503964_-	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
WP_003811803.1|1504690_1505440_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
WP_010926570.1|1505623_1506502_+	elongation factor Ts	NA	NA	NA	NA	NA
WP_010930349.1|1506599_1507316_+	UMP kinase	NA	NA	NA	NA	NA
WP_003811796.1|1507330_1507891_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_010930350.1|1508057_1508822_+	di-trans,poly-cis-decaprenylcistransferase	NA	R9W0U9	Flavobacterium_phage	36.1	1.7e-18
WP_010930351.1|1508841_1509699_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003811788.1|1509695_1510895_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_010930352.1|1510934_1512269_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_010930353.1|1512321_1514658_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
WP_003811782.1|1514783_1515347_+	OmpH family outer membrane protein	NA	NA	NA	NA	NA
WP_010930354.1|1515355_1516447_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
WP_003811776.1|1516518_1516974_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA	NA
WP_010930355.1|1516974_1517769_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
WP_010930356.1|1517765_1518947_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
WP_003811770.1|1518933_1519539_+	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	40.2	8.8e-26
WP_003811768.1|1519535_1520309_+	RNA methyltransferase	NA	NA	NA	NA	NA
WP_010930357.1|1520320_1521148_-	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
WP_010930358.1|1521309_1523673_+	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	35.9	2.2e-165
WP_010930359.1|1523740_1524460_-	glutamine amidotransferase	NA	NA	NA	NA	NA
WP_003811761.1|1524583_1525009_+	membrane protein	NA	NA	NA	NA	NA
WP_005012067.1|1525043_1525994_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811759.1|1526111_1527038_+	paraslipin	NA	NA	NA	NA	NA
WP_010930360.1|1527103_1528261_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
WP_003811754.1|1528241_1528709_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
WP_005015810.1|1528856_1529807_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811752.1|1529823_1530258_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_003811750.1|1530247_1530598_+	RnfH family protein	NA	NA	NA	NA	NA
WP_003811748.1|1530794_1531949_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003811746.1|1531945_1533118_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003811743.1|1533165_1534059_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003811741.1|1534104_1534542_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_010930362.1|1534601_1535291_+	VIT family protein	NA	NA	NA	NA	NA
WP_010930363.1|1535300_1536251_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879624.1|1536349_1537300_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP012130	Bordetella pertussis strain H639 chromosome, complete genome	4088698	1632002	1700088	4088698	transposase,tRNA	Streptococcus_virus(11.11%)	57	NA	NA
WP_010930416.1|1632002_1632491_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_019248504.1|1632608_1633187_+	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010930418.1|1633292_1633661_+	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|1633759_1634710_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994932.1|1634716_1635829_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
WP_010930419.1|1636515_1637718_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930420.1|1637921_1640582_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930421.1|1640594_1643999_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_023995689.1|1644666_1646892_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.5	1.2e-43
WP_010930423.1|1646938_1647265_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_010930424.1|1647315_1647924_+	recombination protein RecR	NA	NA	NA	NA	NA
WP_005013747.1|1648022_1648973_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930425.1|1649042_1649807_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446226.1|1649803_1650340_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930427.1|1650506_1651358_-	membrane protein	NA	A0A1I9SA48	Rhodococcus_phage	35.3	7.0e-37
WP_010928449.1|1651417_1652044_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
WP_005012067.1|1652040_1652991_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019249265.1|1653089_1654202_-	DUF1513 domain-containing protein	NA	NA	NA	NA	NA
WP_019248041.1|1654191_1655193_-	imelysin family protein	NA	NA	NA	NA	NA
WP_019247498.1|1655298_1656810_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_023853587.1|1656806_1658111_-	imelysin	NA	NA	NA	NA	NA
WP_010930431.1|1658222_1658783_-	membrane protein	NA	NA	NA	NA	NA
WP_010930432.1|1659050_1659605_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	32.0	1.7e-15
WP_010930433.1|1660060_1660276_-	dodecin domain-containing protein	NA	NA	NA	NA	NA
WP_033446228.1|1660530_1663128_+	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	22.6	1.5e-21
WP_010930435.1|1663124_1664312_+	cupin	NA	NA	NA	NA	NA
WP_019248658.1|1664970_1665585_+	fimbrial protein	NA	NA	NA	NA	NA
WP_023994740.1|1665673_1666795_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA	NA
WP_033446216.1|1666812_1667718_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_010929577.1|1668610_1669561_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930439.1|1669742_1670495_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
WP_003811112.1|1670563_1671223_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
WP_003811113.1|1671219_1671948_+	glutamine ABC transporter ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	39.3	3.3e-35
WP_010930440.1|1671960_1674240_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	32.1	5.9e-06
WP_010930441.1|1674264_1674468_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_010930442.1|1674509_1675142_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	33.9	2.4e-13
WP_010930443.1|1675277_1676195_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_010930444.1|1676191_1676905_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_003811135.1|1677142_1677913_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003811137.1|1677917_1678517_-	C40 family peptidase	NA	A0A0A8WF62	Clostridium_phage	41.6	1.4e-20
WP_003811138.1|1678761_1680252_+	AMP nucleosidase	NA	NA	NA	NA	NA
WP_010926696.1|1680310_1680595_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003811148.1|1681160_1682087_-	YicC family protein	NA	NA	NA	NA	NA
WP_003811149.1|1682223_1682964_+	ribonuclease PH	NA	NA	NA	NA	NA
WP_010930446.1|1683130_1684507_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003811152.1|1684688_1685594_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930448.1|1687245_1689048_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_003811159.1|1689165_1689816_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA	NA
WP_005012808.1|1689914_1690865_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930450.1|1690886_1692107_+	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
WP_003811164.1|1692292_1693705_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_003811167.1|1693768_1694836_+	PAS domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
WP_010930451.1|1694835_1696323_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
WP_010930452.1|1696332_1697277_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811176.1|1697436_1698135_+	pirin family protein	NA	NA	NA	NA	NA
WP_010930453.1|1698212_1699118_+	pirin family protein	NA	NA	NA	NA	NA
WP_005012067.1|1699137_1700088_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP012130	Bordetella pertussis strain H639 chromosome, complete genome	4088698	1736037	1791628	4088698	transposase	Brazilian_cedratvirus(25.0%)	47	NA	NA
WP_005013747.1|1736037_1736988_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930486.1|1737046_1737820_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486074.1|1737812_1739369_+	LTA synthase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1739365_1740316_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810741.1|1741642_1742245_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810743.1|1742484_1743186_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003816696.1|1743179_1743962_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_005012808.1|1744146_1745097_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930483.1|1745195_1745933_-	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_010926609.1|1746122_1746881_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930482.1|1746927_1747917_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930481.1|1748094_1749063_-	transporter	NA	NA	NA	NA	NA
WP_010930480.1|1750602_1751571_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930479.1|1751579_1752521_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|1752994_1754005_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930477.1|1753995_1755510_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930476.1|1755506_1756853_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930475.1|1756855_1757890_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_023852967.1|1757939_1759565_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_005012067.1|1760117_1761068_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930487.1|1761172_1762120_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247865.1|1762173_1763988_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_010930489.1|1763980_1764655_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_023995112.1|1764784_1767859_+	autotransporter SphB2	NA	NA	NA	NA	NA
WP_019247905.1|1767872_1768172_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930492.1|1768486_1769110_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_010930493.1|1769353_1770223_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010930494.1|1770200_1771145_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247909.1|1771230_1772157_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247910.1|1772269_1773049_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930497.1|1773039_1774236_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010930498.1|1774266_1775217_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_010930499.1|1775438_1776128_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930500.1|1776192_1776948_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930501.1|1776999_1777992_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930502.1|1778001_1778955_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811538.1|1779070_1780033_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019249376.1|1781434_1781863_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1781859_1782810_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930503.1|1783103_1783826_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_010930504.1|1784264_1785452_-	MFS transporter	NA	NA	NA	NA	NA
WP_010930505.1|1785455_1785806_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930506.1|1787555_1788527_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930507.1|1788540_1789254_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930508.1|1789258_1790176_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811452.1|1790282_1790579_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929588.1|1790677_1791628_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP012130	Bordetella pertussis strain H639 chromosome, complete genome	4088698	2024391	2094043	4088698	transposase,tRNA	Staphylococcus_phage(16.67%)	55	NA	NA
WP_003818515.1|2024391_2027049_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	39.0	3.3e-173
WP_010930709.1|2027126_2028329_-	MFS transporter	NA	NA	NA	NA	NA
WP_003810260.1|2028325_2028838_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247822.1|2028960_2029398_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931070.1|2029674_2030625_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_062826579.1|2030723_2031674_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853105.1|2031837_2033733_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.5	2.3e-19
WP_010930711.1|2033846_2034014_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_003810297.1|2034077_2034314_-	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_033446265.1|2034682_2035834_-	multidrug effflux MFS transporter	NA	NA	NA	NA	NA
WP_010929591.1|2037397_2038348_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818523.1|2038799_2039801_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810306.1|2039973_2040831_+	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA	NA
WP_003810308.1|2040827_2042090_+	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.8e-28
WP_003818524.1|2042190_2042565_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
WP_010930713.1|2042637_2043825_+	acetyl-CoA C-acyltransferase family protein	NA	NA	NA	NA	NA
WP_010930714.1|2043909_2044680_+	spermidine synthase	NA	NA	NA	NA	NA
WP_010930715.1|2044793_2045558_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930716.1|2045508_2046810_+	malonyl-CoA decarboxylase	NA	NA	NA	NA	NA
WP_010930717.1|2046806_2047613_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_003818532.1|2049357_2050329_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003818533.1|2050485_2050998_+	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	52.3	1.8e-43
WP_010930718.1|2051156_2052131_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930719.1|2053131_2053926_+	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.7	5.1e-05
WP_003818535.1|2053951_2054758_-	TOBE domain-containing protein	NA	NA	NA	NA	NA
WP_003810329.1|2054868_2055459_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_010930720.1|2055469_2056648_+	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_010930721.1|2056750_2057125_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_019248531.1|2057377_2058709_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_019247651.1|2058775_2062006_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_003810344.1|2063496_2064243_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_010930724.1|2064327_2064789_+	holo-ACP synthase	NA	NA	NA	NA	NA
WP_010930725.1|2064826_2065885_+	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_010930726.1|2065847_2067677_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_003810356.1|2067716_2068289_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930727.1|2069713_2070535_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	4.1e-42
WP_010930728.1|2070853_2072176_+	isocitrate lyase	NA	NA	NA	NA	NA
WP_010930729.1|2072535_2073171_+	membrane protein	NA	NA	NA	NA	NA
WP_010930730.1|2073130_2074081_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930731.1|2074951_2075824_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930732.1|2075901_2077041_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930733.1|2077399_2078656_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_003816691.1|2078661_2079189_+	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_003816690.1|2079193_2080012_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003816687.1|2080011_2080734_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930735.1|2080755_2081070_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930736.1|2081087_2082236_+	CoA transferase	NA	NA	NA	NA	NA
WP_010930737.1|2082266_2083142_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816680.1|2083138_2084458_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_014486081.1|2084530_2085727_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_010930739.1|2085737_2087225_-	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_010930740.1|2089819_2090719_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852887.1|2090856_2091822_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005015810.1|2091920_2092871_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2093092_2094043_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
NZ_CP012130	Bordetella pertussis strain H639 chromosome, complete genome	4088698	2105539	2154935	4088698	transposase	Erysipelothrix_phage(16.67%)	45	NA	NA
WP_005013747.1|2105539_2106490_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812172.1|2107627_2107924_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247707.1|2108098_2109451_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	2.9e-45
WP_010930153.1|2109593_2110610_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930748.1|2112589_2113603_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_010930749.1|2113689_2114595_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812179.1|2114751_2115096_+	exported protein	NA	NA	NA	NA	NA
WP_010930750.1|2115253_2115712_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_010930751.1|2115725_2117942_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_003812183.1|2117938_2119000_+	XdhC family protein	NA	NA	NA	NA	NA
WP_010930752.1|2119028_2120003_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930753.1|2119954_2120773_-	hypothetical protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	28.8	2.3e-16
WP_003812191.1|2120785_2121394_-	peptidase S16	NA	NA	NA	NA	NA
WP_010930754.1|2121568_2121964_+	VOC family protein	NA	NA	NA	NA	NA
WP_010930755.1|2121982_2123422_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	37.4	7.4e-55
WP_003812199.1|2123450_2123798_+	GFA family protein	NA	NA	NA	NA	NA
WP_010929577.1|2123816_2124767_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2125419_2126370_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997035.1|2126453_2128271_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
WP_019247659.1|2128344_2128992_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930758.1|2129004_2129934_-	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_014905663.1|2130103_2130568_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003816977.1|2130815_2131496_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003816975.1|2131544_2133236_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
WP_010930760.1|2133251_2133803_-	SRPBCC family protein	NA	NA	NA	NA	NA
WP_003816971.1|2133799_2134171_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930761.1|2134283_2135120_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_029443822.1|2135130_2135655_-	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_003812228.1|2135752_2135932_+	DUF3008 family protein	NA	NA	NA	NA	NA
WP_010930763.1|2136061_2137036_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003816964.1|2137166_2137523_+	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
WP_010930764.1|2137512_2138388_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_010930765.1|2138486_2139371_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930766.1|2139392_2140688_-	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_003816959.1|2141636_2142287_+	flavodoxin family protein	NA	NA	NA	NA	NA
WP_010930767.1|2142374_2143895_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930768.1|2144152_2146018_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|2147063_2148014_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268681.1|2148031_2148172_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930769.1|2148986_2149346_-	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_010930770.1|2149333_2150770_-	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930771.1|2150766_2151420_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930772.1|2151416_2152610_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930773.1|2152713_2153988_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_005012067.1|2153984_2154935_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
NZ_CP012130	Bordetella pertussis strain H639 chromosome, complete genome	4088698	2166139	2234515	4088698	protease,transposase,tRNA	Klosneuvirus(22.22%)	59	NA	NA
WP_005013747.1|2166139_2167090_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2167188_2168139_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122784.1|2168098_2168512_-	transcriptional regulator	NA	A0A222YXG1	Escherichia_phage	59.0	3.8e-36
WP_003816708.1|2168796_2169096_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930783.1|2169505_2171788_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	30.1	3.2e-36
WP_124740709.1|2172253_2172448_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930784.1|2172473_2174504_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	41.9	1.0e-65
WP_006218592.1|2174523_2174736_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_003810720.1|2175013_2175553_-	phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_023852902.1|2175666_2176962_-	adenylosuccinate synthase	NA	A0A160ER07	Powai_lake_megavirus	33.5	3.0e-63
WP_010930786.1|2177038_2178196_-	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
WP_010930787.1|2178379_2179279_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_010930788.1|2179297_2180602_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930789.1|2180567_2181674_-	GTPase HflX	NA	NA	NA	NA	NA
WP_003810707.1|2181761_2181998_-	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930790.1|2182136_2183207_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810703.1|2183210_2184566_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_023852925.1|2184592_2185750_-	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_010930791.1|2185755_2186394_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_033446258.1|2186395_2187691_-|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_033446257.1|2187740_2189027_-	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_003810693.1|2189042_2189549_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_004568542.1|2189545_2190694_-	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_003810689.1|2190721_2191147_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
WP_010930794.1|2191469_2194352_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
WP_023852900.1|2194444_2195200_-	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_010930796.1|2195965_2197315_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_005012067.1|2197413_2198364_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930594.1|2198437_2198911_+	RidA family protein	NA	NA	NA	NA	NA
WP_010930593.1|2198936_2200145_+	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_003816734.1|2200141_2200915_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_014905757.1|2200914_2201538_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_010926757.1|2201703_2201964_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_010930591.1|2202267_2202849_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004568544.1|2202915_2203170_-	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_010930590.1|2203156_2205781_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
WP_010930589.1|2205852_2206671_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810661.1|2206667_2207273_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_010930588.1|2207310_2208444_-	general secretion pathway protein	NA	NA	NA	NA	NA
WP_010930587.1|2210159_2210534_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930586.1|2210631_2211906_-	type 4b pilus protein PilO2	NA	NA	NA	NA	NA
WP_010930585.1|2211909_2213487_-	lipoprotein	NA	NA	NA	NA	NA
WP_010930584.1|2214393_2215749_-	amidase	NA	NA	NA	NA	NA
WP_010930583.1|2215745_2217380_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	8.2e-18
WP_010930582.1|2217372_2218203_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003810637.1|2218220_2219165_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930581.1|2219217_2220792_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247553.1|2220839_2221199_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247554.1|2221191_2221512_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247555.1|2221627_2222560_+	acyclic terpene utilization AtuA family protein	NA	NA	NA	NA	NA
WP_003818676.1|2222662_2223619_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810623.1|2223768_2225106_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010930578.1|2225110_2226367_-	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_010930577.1|2226562_2227609_-	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
WP_003818672.1|2227666_2228035_-	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
WP_010930576.1|2228165_2229038_-	MOSC domain-containing protein	NA	NA	NA	NA	NA
WP_003818670.1|2229114_2230017_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930574.1|2231073_2232291_-	four-carbon acid sugar kinase family protein	NA	NA	NA	NA	NA
WP_010929577.1|2233564_2234515_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
NZ_CP012130	Bordetella pertussis strain H639 chromosome, complete genome	4088698	2249793	2314614	4088698	protease,transposase,tRNA	Lake_Baikal_phage(18.18%)	54	NA	NA
WP_005012067.1|2249793_2250744_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247934.1|2251314_2251527_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247935.1|2251544_2252276_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812478.1|2252310_2252952_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010930565.1|2252944_2253613_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010930564.1|2255825_2256602_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930563.1|2256623_2257781_-	thiolase	NA	NA	NA	NA	NA
WP_003812491.1|2257777_2258209_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930562.1|2258205_2259003_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010930561.1|2259022_2259424_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_010930560.1|2259490_2260462_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930559.1|2260527_2261751_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247936.1|2261978_2262929_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930557.1|2263052_2265506_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.0	1.5e-220
WP_010930556.1|2265694_2266999_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	53.8	3.2e-129
WP_003812508.1|2267103_2267757_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	57.5	6.8e-56
WP_010930555.1|2267759_2269070_-	trigger factor	NA	NA	NA	NA	NA
WP_076879561.1|2269248_2269827_+	TIGR00645 family protein	NA	K4K6D8	Caulobacter_phage	33.7	1.0e-23
WP_010930553.1|2269938_2270139_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.4	7.4e-14
WP_003812519.1|2270484_2271051_-	DUF924 family protein	NA	NA	NA	NA	NA
WP_010930551.1|2271134_2271338_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.1	1.6e-16
WP_003812524.1|2271644_2271965_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812526.1|2272006_2272288_-	membrane protein	NA	NA	NA	NA	NA
WP_010930550.1|2272362_2273619_-	autotransporter Phg	NA	NA	NA	NA	NA
WP_010930549.1|2274001_2274331_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003812536.1|2275901_2276723_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
WP_010930548.1|2276722_2277862_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
WP_019247938.1|2277868_2278765_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_033446179.1|2278779_2280687_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	31.8	1.1e-66
WP_010926400.1|2281046_2283659_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_003812546.1|2283711_2286012_-	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	35.9	9.9e-110
WP_003812548.1|2286008_2287217_-	aminotransferase	NA	NA	NA	NA	NA
WP_010930545.1|2287478_2287853_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2287849_2288800_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879626.1|2288898_2290893_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.3	4.4e-21
WP_010930543.1|2290952_2291918_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_010930542.1|2291907_2294769_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
WP_010930541.1|2294771_2295278_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_010930540.1|2295382_2296591_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	30.0	3.8e-36
WP_033446178.1|2296592_2297531_-	membrane protein	NA	NA	NA	NA	NA
WP_010930538.1|2297692_2298166_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|2298162_2299113_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566334.1|2299223_2299664_-	DUF937 domain-containing protein	NA	NA	NA	NA	NA
WP_010930537.1|2299792_2301022_-	lytic murein transglycosylase	NA	NA	NA	NA	NA
WP_004566336.1|2301060_2301882_-	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_029443743.1|2301935_2303087_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930535.1|2303178_2303667_-	DUF1854 domain-containing protein	NA	NA	NA	NA	NA
WP_019247811.1|2306217_2308767_+	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_010930533.1|2308837_2311411_+	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_003813568.1|2311676_2311877_+	CsbD family protein	NA	NA	NA	NA	NA
WP_003813570.1|2311908_2312070_+	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
WP_003813572.1|2312127_2312466_+	BON domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|2312614_2313565_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2313663_2314614_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
NZ_CP012130	Bordetella pertussis strain H639 chromosome, complete genome	4088698	2567973	2633694	4088698	protease,transposase,tRNA	Salmonella_phage(15.38%)	59	NA	NA
WP_023853254.1|2567973_2569917_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566380.1|2569913_2570834_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930928.1|2570853_2571441_-	DNA repair protein RecO	NA	NA	NA	NA	NA
WP_003813784.1|2571433_2572324_-	GTPase Era	NA	NA	NA	NA	NA
WP_023853248.1|2572320_2573082_-	ribonuclease III	NA	M4QNJ2	Ostreococcus_lucimarinus_virus	33.0	3.1e-20
WP_010930929.1|2573087_2573972_-	signal peptidase I	NA	NA	NA	NA	NA
WP_010930930.1|2573994_2575788_-	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	23.5	8.4e-24
WP_004566381.1|2575918_2577406_-|protease	DegQ family serine endoprotease	protease	W5SAB9	Pithovirus	31.5	1.2e-07
WP_010930931.1|2577443_2578502_-	siderophore-interacting protein	NA	NA	NA	NA	NA
WP_023853242.1|2578501_2579002_-	sigma-E factor negative regulatory protein	NA	NA	NA	NA	NA
WP_003813797.1|2579014_2579614_-	RNA polymerase sigma factor RpoE	NA	A0A0F6TH34	Sinorhizobium_phage	26.1	2.2e-05
WP_010930933.1|2579610_2580111_-	membrane protein	NA	NA	NA	NA	NA
WP_003813802.1|2580112_2581342_-	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA	NA
WP_003813816.1|2581531_2581771_-	acyl carrier protein	NA	B2ZXV3	Ralstonia_phage	46.6	5.4e-11
WP_003813819.1|2581953_2582706_-	3-oxoacyl-ACP reductase FabG	NA	Q06VL0	Trichoplusia_ni_ascovirus	31.3	6.9e-12
WP_010930934.1|2582707_2583643_-	ACP S-malonyltransferase	NA	NA	NA	NA	NA
WP_010930935.1|2583724_2584711_-	ketoacyl-ACP synthase III	NA	NA	NA	NA	NA
WP_003821347.1|2584710_2585769_-	phosphate acyltransferase PlsX	NA	NA	NA	NA	NA
WP_003813827.1|2585825_2586008_-	50S ribosomal protein L32	NA	NA	NA	NA	NA
WP_010930936.1|2586059_2586653_-	DUF177 domain-containing protein	NA	NA	NA	NA	NA
WP_003821345.1|2586761_2587361_+	septum formation protein Maf	NA	NA	NA	NA	NA
WP_010930937.1|2587357_2588068_+	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_010930938.1|2588069_2588897_+	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA	NA
WP_003814009.1|2590713_2591955_-	MFS transporter	NA	NA	NA	NA	NA
WP_003814010.1|2591966_2592740_-	peroxide stress protein YaaA	NA	NA	NA	NA	NA
WP_005012067.1|2592766_2593717_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814011.1|2593815_2594598_-	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003814012.1|2594686_2595913_-	transporter	NA	NA	NA	NA	NA
WP_003814013.1|2596638_2598024_+	alcaligin siderophore biosynthesis protein AlcA	NA	NA	NA	NA	NA
WP_003814014.1|2598042_2598648_+	alcaligin siderophore biosynthesis protein AlcB	NA	NA	NA	NA	NA
WP_010930939.1|2598644_2600501_+	alcaligin siderophore biosynthesis protein AlcC	NA	NA	NA	NA	NA
WP_003814016.1|2600497_2601298_+	alcaligin siderophore biosynthesis protein AlcD	NA	NA	NA	NA	NA
WP_005013753.1|2601312_2602506_+	alcaligin siderophore biosynthesis protein AlcE	NA	NA	NA	NA	NA
WP_003814017.1|2602573_2603548_+	alcaligin siderophore biosynthesis transcriptional regulator AlcR	NA	NA	NA	NA	NA
WP_010930940.1|2603670_2604894_+	alcaligin siderophore export MFS transporter Bcr	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
WP_010930941.1|2605004_2607209_+	TonB-dependent alcaligin siderophore receptor FauA	NA	NA	NA	NA	NA
WP_003814020.1|2607503_2608163_+	NAAT family transporter	NA	NA	NA	NA	NA
WP_019247690.1|2608170_2608377_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814021.1|2608715_2609471_+	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_003814023.1|2609741_2610257_+	hypothetical protein	NA	T1SAR8	Salmonella_phage	44.6	5.1e-06
WP_003814024.1|2610529_2610847_+	virulence factor	NA	NA	NA	NA	NA
WP_005014990.1|2611034_2611271_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930944.1|2611561_2612917_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
WP_010930945.1|2612963_2614304_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
WP_010930946.1|2614405_2615038_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_010930947.1|2615037_2617407_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
WP_010930948.1|2617439_2618399_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
WP_010929073.1|2618385_2619072_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005015014.1|2619068_2619401_+	multidrug transporter	NA	NA	NA	NA	NA
WP_005012067.1|2619516_2620467_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|2620565_2621516_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814040.1|2621512_2623579_-	cation acetate symporter	NA	NA	NA	NA	NA
WP_003814042.1|2623578_2623851_-	DUF4212 domain-containing protein	NA	NA	NA	NA	NA
WP_017685545.1|2624545_2624635_+	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_010930949.1|2624634_2626419_+	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA	NA
WP_010930950.1|2626442_2628608_+	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	27.1	1.2e-24
WP_003814050.1|2628618_2629218_+	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
WP_003814052.1|2632039_2632735_+	two-component system response regulator KdpE	NA	NA	NA	NA	NA
WP_005013747.1|2632743_2633694_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NZ_CP012130	Bordetella pertussis strain H639 chromosome, complete genome	4088698	2719811	2760480	4088698	transposase,tRNA	Salmonella_phage(33.33%)	42	NA	NA
WP_010929591.1|2719811_2720762_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004567479.1|2720872_2721055_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931004.1|2721154_2721751_-	lipoprotein	NA	NA	NA	NA	NA
WP_010931005.1|2721934_2723026_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003812822.1|2723525_2723936_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852697.1|2723994_2724324_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	42.2	2.7e-13
WP_010931007.1|2724341_2726759_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_010926359.1|2726771_2727794_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	38.6	1.0e-26
WP_003812832.1|2727868_2728228_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_003812834.1|2728243_2728441_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_010929584.1|2728776_2729727_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816756.1|2729921_2730371_+	dUTP diphosphatase	NA	S4TNT3	Salmonella_phage	67.2	3.7e-45
WP_005012808.1|2730367_2731318_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931008.1|2731428_2732877_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_023853496.1|2732991_2733237_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2733376_2734327_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820420.1|2734571_2735285_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_019247724.1|2735407_2735635_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003816758.1|2735929_2736568_-	DedA family protein	NA	NA	NA	NA	NA
WP_010931011.1|2736676_2737711_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_010929591.1|2737707_2738658_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931012.1|2739073_2739598_-	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
WP_004567322.1|2739601_2739871_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931013.1|2740069_2741131_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931014.1|2741214_2742849_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
WP_010931015.1|2742850_2743654_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931016.1|2743682_2744642_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_077092439.1|2744645_2746160_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248147.1|2746196_2747201_-	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931018.1|2747632_2748103_-	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
WP_010931019.1|2748138_2748750_-	LysE family translocator	NA	NA	NA	NA	NA
WP_010931020.1|2748780_2749404_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_010931021.1|2749484_2751017_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_023853282.1|2751051_2752269_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931023.1|2752336_2753368_-	alcohol dehydrogenase catalytic domain-containing protein	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
WP_010931024.1|2753364_2754534_-	NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_010931025.1|2754527_2755208_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931026.1|2755369_2756212_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931027.1|2756374_2757346_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931028.1|2757517_2758396_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931029.1|2758418_2759489_-	FUSC family protein	NA	NA	NA	NA	NA
WP_005013747.1|2759529_2760480_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
NZ_CP012130	Bordetella pertussis strain H639 chromosome, complete genome	4088698	2815945	2888815	4088698	transposase,tRNA	Moraxella_phage(16.67%)	58	NA	NA
WP_003810909.1|2815945_2816362_-|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931061.1|2816472_2817105_+	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA	NA
WP_010931062.1|2817133_2817577_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_003810897.1|2817598_2818690_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931063.1|2818744_2819545_-	aldolase	NA	NA	NA	NA	NA
WP_010931064.1|2819680_2820301_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931065.1|2820440_2820914_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|2822053_2823004_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931066.1|2823000_2830662_-	filamentous hemagglutinin N-terminal domain-containing protein	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
WP_010931067.1|2830902_2834949_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
WP_003816847.1|2835261_2835843_+	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010931068.1|2835839_2837138_+	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010931069.1|2837217_2838246_+	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010931070.1|2838506_2839457_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|2839453_2840404_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931071.1|2840720_2841326_+	fimbrial protein	NA	NA	NA	NA	NA
WP_010931072.1|2841379_2842693_-	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
WP_003813284.1|2842767_2843238_-	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA	NA
WP_010931073.1|2843237_2844026_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
WP_010931074.1|2844036_2845689_-	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA	NA
WP_010929591.1|2845776_2846727_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931075.1|2847888_2848395_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA	NA
WP_003813293.1|2848391_2849156_-	phenylacetate-CoA oxygenase subunit PaaC	NA	NA	NA	NA	NA
WP_010931076.1|2849171_2849456_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA	NA
WP_003813298.1|2849520_2850510_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
WP_010931077.1|2850681_2851611_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA	NA
WP_003813302.1|2851582_2852269_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
WP_003813303.1|2852302_2852848_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	37.7	2.1e-26
WP_003813306.1|2852892_2854158_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003813309.1|2854154_2855057_+	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA	NA
WP_019247679.1|2856238_2857183_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931079.1|2857277_2858795_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931080.1|2858836_2860465_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_003811986.1|2860572_2861454_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931081.1|2864566_2864941_+	endonuclease	NA	F4YXR7	Roseobacter_phage	54.4	2.1e-25
WP_003812004.1|2864965_2865304_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931082.1|2865347_2866982_-	NAD+ synthase	NA	A0A2L0UZF5	Agrobacterium_phage	36.6	8.3e-87
WP_010931083.1|2867020_2868367_-	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_003812010.1|2868474_2869896_+	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_010931084.1|2869965_2870550_-	nitroreductase	NA	NA	NA	NA	NA
WP_005012067.1|2870652_2871603_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931085.1|2871737_2872844_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010931086.1|2872854_2873952_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
WP_010931087.1|2874096_2875302_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_010931088.1|2875308_2875830_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA	NA
WP_023853551.1|2875826_2876309_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
WP_003819740.1|2876314_2876566_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
WP_003819741.1|2876546_2877032_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
WP_010931090.1|2877167_2880629_+	DUF748 domain-containing protein	NA	NA	NA	NA	NA
WP_010931091.1|2880646_2881531_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
WP_010931092.1|2881540_2881972_-	lipoprotein	NA	NA	NA	NA	NA
WP_003809348.1|2882218_2882722_+	peroxiredoxin	NA	M1I839	Pelagibacter_phage	44.1	1.8e-24
WP_010931094.1|2882799_2884200_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931095.1|2884274_2885150_-	membrane protein	NA	NA	NA	NA	NA
WP_023853546.1|2885146_2886154_-	biotin synthase BioB	NA	NA	NA	NA	NA
WP_010931097.1|2886621_2886927_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003819753.1|2887017_2887608_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930525.1|2887798_2888815_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 22
NZ_CP012130	Bordetella pertussis strain H639 chromosome, complete genome	4088698	2891958	2958770	4088698	protease,transposase	uncultured_Mediterranean_phage(28.57%)	49	NA	NA
WP_023995489.1|2891958_2892909_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2893007_2893958_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931099.1|2893954_2894749_-	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_010931100.1|2894780_2895485_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931101.1|2895559_2896360_-	SURF1 family protein	NA	NA	NA	NA	NA
WP_003809276.1|2896356_2896764_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_003819722.1|2896760_2897402_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_010931102.1|2897394_2899395_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_010931103.1|2900655_2901987_+	MFS transporter	NA	NA	NA	NA	NA
WP_005012067.1|2901983_2902934_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931105.1|2904640_2904907_-	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_003812839.1|2905614_2905953_+	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931107.1|2910507_2911110_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931108.1|2911206_2912496_+	MFS transporter	NA	NA	NA	NA	NA
WP_003812846.1|2912553_2913285_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931109.1|2913281_2914085_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812851.1|2914081_2915170_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|2915166_2916096_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812857.1|2916244_2917390_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930800.1|2917411_2918362_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931110.1|2918692_2922514_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010931111.1|2922670_2923339_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_014905522.1|2923343_2925017_-	MCE family protein	NA	NA	NA	NA	NA
WP_003820402.1|2925035_2926355_-	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_010931114.1|2926359_2928675_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.1e-164
WP_010931115.1|2928730_2930899_-	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_023853340.1|2930895_2936076_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_003820400.1|2936174_2936489_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_003812875.1|2936716_2936962_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820399.1|2937056_2937575_+	hypothetical protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_010931117.1|2937674_2938880_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_019247560.1|2938995_2940393_-	chloride channel protein	NA	NA	NA	NA	NA
WP_010931119.1|2940509_2941088_-	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_010931120.1|2941160_2942552_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_005012067.1|2942719_2943670_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812889.1|2943950_2944571_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_010931122.1|2944567_2944981_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_010931123.1|2944977_2946021_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_003812895.1|2946076_2946265_+	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931124.1|2946274_2947039_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_010931125.1|2947129_2947786_+	adenylate kinase	NA	NA	NA	NA	NA
WP_010931126.1|2947877_2948636_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931127.1|2948661_2950263_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931128.1|2950463_2951468_+	DUF4880 domain-containing protein	NA	NA	NA	NA	NA
WP_003812908.1|2951568_2951832_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931129.1|2951949_2952726_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_005012067.1|2953316_2954267_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931130.1|2956650_2957763_-	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_005012808.1|2957819_2958770_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NZ_CP012130	Bordetella pertussis strain H639 chromosome, complete genome	4088698	2989156	3029394	4088698	transposase	Planktothrix_phage(50.0%)	37	NA	NA
WP_010929591.1|2989156_2990107_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852715.1|2990227_2991124_-	inositol monophosphatase	NA	NA	NA	NA	NA
WP_003814547.1|2993401_2995627_+	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_003814544.1|2995791_2996880_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_019247918.1|2996836_2997490_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931144.1|2997537_2998335_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930176.1|2998866_2999817_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994659.1|2999897_3001046_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|3001102_3002053_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814535.1|3002151_3002457_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_003820797.1|3002485_3002920_-	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_010931147.1|3002921_3004166_-	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003820799.1|3004162_3004873_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_033446288.1|3004887_3005799_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_155120814.1|3005986_3006151_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|3006168_3007119_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931149.1|3007210_3007615_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247890.1|3007611_3008070_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247891.1|3008076_3008985_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931150.1|3008981_3009848_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_003814524.1|3009834_3010662_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003820806.1|3010672_3011800_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_023852748.1|3012877_3014116_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931152.1|3014157_3015420_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010931153.1|3015426_3016179_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_019248355.1|3016230_3016416_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003820813.1|3016691_3017156_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_003820814.1|3017187_3017847_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_010931154.1|3017991_3020100_+	AsmA family protein	NA	NA	NA	NA	NA
WP_023852714.1|3020096_3021047_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931155.1|3021150_3021771_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003820818.1|3021874_3022615_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019248356.1|3023749_3024874_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247402.1|3024919_3025288_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3025529_3026480_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247492.1|3027515_3028058_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3028443_3029394_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 25
NZ_CP012130	Bordetella pertussis strain H639 chromosome, complete genome	4088698	3401380	3455121	4088698	transposase	Staphylococcus_phage(33.33%)	48	NA	NA
WP_023995489.1|3401380_3402331_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931336.1|3402735_3403380_-	urease accessory protein UreG	NA	NA	NA	NA	NA
WP_019247677.1|3403404_3403989_-	urease accessory protein UreF	NA	NA	NA	NA	NA
WP_014905506.1|3404089_3404707_-	urease accessory protein UreE	NA	NA	NA	NA	NA
WP_010931337.1|3404709_3406425_-	urease subunit alpha	NA	NA	NA	NA	NA
WP_010931338.1|3406421_3406730_-	urease subunit beta	NA	NA	NA	NA	NA
WP_003814828.1|3406746_3407364_-	HupE/UreJ family protein	NA	NA	NA	NA	NA
WP_010931340.1|3407408_3407711_-	urease subunit gamma	NA	NA	NA	NA	NA
WP_003814832.1|3407811_3408666_-	urease accessory protein UreD	NA	NA	NA	NA	NA
WP_124740609.1|3408853_3409078_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929281.1|3409247_3409520_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_010929282.1|3409937_3410345_-	GFA family protein	NA	NA	NA	NA	NA
WP_010931341.1|3410714_3411509_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010927102.1|3411609_3412845_+	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003814852.1|3412913_3413930_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931342.1|3413941_3415318_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003814856.1|3415314_3416511_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814858.1|3416507_3418046_-	SpoVR family protein	NA	NA	NA	NA	NA
WP_010931343.1|3418042_3419302_-	YeaH/YhbH family protein	NA	NA	NA	NA	NA
WP_005012067.1|3421242_3422193_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931344.1|3422959_3424054_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247312.1|3424046_3425381_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_003808193.1|3425334_3426018_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003808195.1|3426043_3427207_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_004566224.1|3427203_3428205_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931346.1|3428204_3429077_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931347.1|3429073_3429823_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931348.1|3429819_3430611_-	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931349.1|3430607_3431747_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_047122778.1|3432022_3432808_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486103.1|3432841_3433624_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_010931351.1|3433627_3434017_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931352.1|3435156_3436020_+	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931353.1|3436055_3437144_+	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_010931070.1|3437140_3438091_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247959.1|3438444_3441423_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003818344.1|3442349_3443228_+	fatty acid desaturase	NA	NA	NA	NA	NA
WP_005013747.1|3445176_3446127_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931354.1|3446123_3446591_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_010931355.1|3446633_3447404_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_010927090.1|3447424_3448225_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931356.1|3448235_3449645_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_003814739.1|3449739_3450525_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931561.1|3450764_3451781_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814742.1|3451888_3452281_-	OsmC family protein	NA	NA	NA	NA	NA
WP_010931357.1|3452418_3453099_+	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_023994844.1|3453103_3454075_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930179.1|3454170_3455121_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
NZ_CP012130	Bordetella pertussis strain H639 chromosome, complete genome	4088698	3461276	3520576	4088698	transposase,tRNA	Acinetobacter_phage(27.27%)	47	NA	NA
WP_003820957.1|3461276_3463040_+|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
WP_010931362.1|3463151_3464030_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003814250.1|3464142_3464958_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_003814252.1|3464961_3465213_+	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_010929632.1|3465297_3466314_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814254.1|3466644_3466866_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_019247693.1|3469226_3470144_-	DMT family transporter	NA	NA	NA	NA	NA
WP_019247692.1|3470641_3471850_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931365.1|3471929_3473501_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814275.1|3473618_3474554_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_003814277.1|3474742_3475687_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
WP_003814283.1|3476254_3481972_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
WP_010931367.1|3481977_3483105_+	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
WP_003814287.1|3483160_3483787_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|3484058_3485075_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010927020.1|3485170_3485881_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931368.1|3485877_3486867_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931369.1|3486962_3488594_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931370.1|3488596_3489334_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247745.1|3489489_3490362_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_023852703.1|3490711_3491851_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814300.1|3491847_3492507_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_003814302.1|3492578_3493211_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_010931372.1|3493240_3493759_+	flavin reductase family protein	NA	NA	NA	NA	NA
WP_010931373.1|3493769_3494879_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003814312.1|3494925_3495780_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931374.1|3495781_3496684_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_077092443.1|3497906_3498857_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997720.1|3500613_3501603_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931375.1|3501778_3502567_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_003817833.1|3502563_3503595_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_003815390.1|3503613_3504177_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_010931376.1|3504232_3505753_-	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_010931377.1|3506016_3506721_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_023852620.1|3506728_3507457_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_003815381.1|3507571_3507946_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003815379.1|3507988_3509278_+	murein transglycosylase A	NA	NA	NA	NA	NA
WP_010931378.1|3509274_3510444_+	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_010931379.1|3510440_3511280_+	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931380.1|3511339_3512275_+	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_005012067.1|3512287_3513238_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931381.1|3513336_3514299_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_003817821.1|3514330_3514690_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931382.1|3514814_3515717_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_010931383.1|3515718_3517491_-	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_003815367.1|3517525_3518302_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_023852617.1|3519625_3520576_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 27
NZ_CP012130	Bordetella pertussis strain H639 chromosome, complete genome	4088698	3535514	3593587	4088698	transposase,tRNA	Planktothrix_phage(12.5%)	47	NA	NA
WP_010929584.1|3535514_3536465_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931392.1|3536593_3537727_-	M20 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931393.1|3537770_3538676_-	hydrolase	NA	NA	NA	NA	NA
WP_023852622.1|3538678_3540379_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	1.0e-15
WP_010931394.1|3540375_3541296_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003817805.1|3541303_3542281_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931395.1|3542339_3543374_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003815317.1|3545348_3545585_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931396.1|3545711_3546575_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_003815315.1|3546663_3547485_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003815313.1|3547564_3548302_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931397.1|3548298_3549291_-	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_010931398.1|3549443_3550067_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931399.1|3550111_3551260_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931400.1|3553583_3554534_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486105.1|3554874_3555825_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|3555923_3556874_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443756.1|3557170_3557668_+	cupredoxin family protein	NA	NA	NA	NA	NA
WP_010931403.1|3557710_3559486_+	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
WP_010931404.1|3559493_3560360_+	copper resistance protein B	NA	NA	NA	NA	NA
WP_019249391.1|3560366_3561101_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931406.1|3562270_3563065_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815296.1|3563354_3563945_+	cysteine dioxygenase	NA	NA	NA	NA	NA
WP_010931407.1|3563978_3565307_-	amidase	NA	NA	NA	NA	NA
WP_010931408.1|3565381_3566527_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014905478.1|3566638_3567637_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446233.1|3567599_3568034_+	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
WP_010929974.1|3569550_3570435_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929973.1|3570431_3571637_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010929972.1|3571633_3572494_-	endonuclease	NA	NA	NA	NA	NA
WP_003807038.1|3572606_3574397_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
WP_033446243.1|3574437_3575082_-	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	8.5e-11
WP_010929971.1|3575103_3575412_-	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929970.1|3575577_3576864_-	membrane protein	NA	NA	NA	NA	NA
WP_010929969.1|3578297_3579248_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929968.1|3581199_3582414_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_003815171.1|3582519_3583509_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
WP_003815172.1|3583505_3584114_+	HAD-IIIA family hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
WP_010929967.1|3584126_3584756_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_003815175.1|3584752_3585373_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_003815177.1|3585404_3586196_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
WP_010929966.1|3587047_3587503_+	PTS transporter subunit EIIA	NA	NA	NA	NA	NA
WP_010929965.1|3587521_3588448_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_010929964.1|3588501_3589788_-	cytochrome c	NA	NA	NA	NA	NA
WP_003815183.1|3590718_3591591_+	RNase adapter RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
WP_010929963.1|3591587_3592538_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
WP_005012067.1|3592636_3593587_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 28
NZ_CP012130	Bordetella pertussis strain H639 chromosome, complete genome	4088698	3603387	3674728	4088698	transposase,tRNA	Paramecium_bursaria_Chlorella_virus(20.0%)	59	NA	NA
WP_010929957.1|3603387_3604662_-|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
WP_010929956.1|3605384_3606335_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929591.1|3606433_3607384_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929955.1|3607482_3609858_-	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010929954.1|3609877_3610714_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929953.1|3610710_3611508_-	citryl-CoA lyase	NA	NA	NA	NA	NA
WP_010929952.1|3611504_3613694_-	acetate--CoA ligase family protein	NA	NA	NA	NA	NA
WP_010929951.1|3613745_3614732_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929950.1|3614813_3616616_-	DNA alkylation response protein	NA	NA	NA	NA	NA
WP_010929949.1|3616873_3618991_+	crotonase	NA	NA	NA	NA	NA
WP_010929948.1|3619020_3620205_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_010929947.1|3620226_3620715_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929946.1|3620864_3622697_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	A7IW18	Paramecium_bursaria_Chlorella_virus	48.1	4.3e-156
WP_010929945.1|3622894_3623875_-	NAD(P)-dependent oxidoreductase	NA	M1IDV7	Acanthocystis_turfacea_Chlorella_virus	29.5	7.6e-11
WP_010929944.1|3623931_3624951_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003815697.1|3625014_3625908_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929943.1|3626306_3627086_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929942.1|3627085_3629227_+	acetate--CoA ligase family protein	NA	NA	NA	NA	NA
WP_010929941.1|3629374_3630319_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929940.1|3630402_3631386_-	oxidoreductase	NA	NA	NA	NA	NA
WP_003815690.1|3631750_3633025_+	NAD(P)-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010929939.1|3633055_3633484_+	RidA family protein	NA	NA	NA	NA	NA
WP_003815682.1|3633494_3634169_+	DUF1028 domain-containing protein	NA	NA	NA	NA	NA
WP_010929938.1|3634161_3635334_+	acetylornithine deacetylase	NA	NA	NA	NA	NA
WP_010929937.1|3635466_3636486_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929936.1|3636666_3637857_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010929935.1|3637870_3639001_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010929934.1|3639044_3640766_-	D-lactate dehydrogenase	NA	NA	NA	NA	NA
WP_003815672.1|3640884_3641847_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815671.1|3641953_3642925_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247835.1|3643543_3644212_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003815668.1|3644208_3644616_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_010929577.1|3644612_3645563_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814730.1|3648007_3648742_+	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
WP_003814728.1|3649151_3649331_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814726.1|3649521_3650835_+	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929786.1|3650850_3652362_-	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010929785.1|3652358_3653564_-	sodium/glutamate symporter	NA	NA	NA	NA	NA
WP_022997984.1|3653759_3654737_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446199.1|3654829_3655324_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003814720.1|3655453_3656512_+	glycosyltransferase family 2 protein	NA	I1TED8	Salmonella_phage	40.5	2.8e-59
WP_010927086.1|3656508_3658128_+	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_157734656.1|3658087_3658357_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929784.1|3658315_3659419_+	ChbG/HpnK family deacetylase	NA	NA	NA	NA	NA
WP_010929783.1|3659415_3659871_+	multidrug/biocide efflux PACE transporter	NA	NA	NA	NA	NA
WP_003814709.1|3659876_3660800_-	alpha/beta fold hydrolase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	27.2	4.8e-07
WP_010929782.1|3660889_3661549_-	LysE family translocator	NA	NA	NA	NA	NA
WP_047122777.1|3661545_3662460_-	DMT family transporter	NA	NA	NA	NA	NA
WP_010929577.1|3662548_3663499_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486055.1|3663574_3664555_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807865.1|3665015_3665615_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003807867.1|3665683_3666676_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486054.1|3666725_3668315_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_014486053.1|3668355_3669252_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486052.1|3669248_3670955_+	thiamine pyrophosphate-requiring protein	NA	NA	NA	NA	NA
WP_019247259.1|3671122_3672301_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486051.1|3672297_3673068_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_014486050.1|3673116_3673818_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486049.1|3673744_3674728_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 29
NZ_CP012130	Bordetella pertussis strain H639 chromosome, complete genome	4088698	3744550	3796689	4088698	protease,transposase	Paramecium_bursaria_Chlorella_virus(14.29%)	50	NA	NA
WP_005013747.1|3744550_3745501_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814960.1|3745623_3746352_+	monofunctional biosynthetic peptidoglycan transglycosylase	NA	NA	NA	NA	NA
WP_010929739.1|3746448_3747627_+	LPS export ABC transporter permease LptG	NA	NA	NA	NA	NA
WP_010929738.1|3747623_3748457_+	symmetrical bis(5'-nucleosyl)-tetraphosphatase	NA	NA	NA	NA	NA
WP_010929737.1|3748493_3749234_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929736.1|3749353_3750529_-	dihydroorotase	NA	NA	NA	NA	NA
WP_003820560.1|3750525_3751479_-	aspartate carbamoyltransferase catalytic subunit	NA	A7RB08	Paramecium_bursaria_Chlorella_virus	35.8	2.5e-30
WP_010929735.1|3751492_3751894_-	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_010927118.1|3751886_3752492_-	YqgE/AlgH family protein	NA	NA	NA	NA	NA
WP_003814980.1|3752579_3752744_-	rubredoxin	NA	NA	NA	NA	NA
WP_010929734.1|3752860_3753709_+	hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_003814984.1|3753705_3754359_+	thiamine phosphate synthase	NA	NA	NA	NA	NA
WP_010929733.1|3754375_3755659_+	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA	NA
WP_010929732.1|3755898_3757524_+	DUF342 domain-containing protein	NA	NA	NA	NA	NA
WP_003814990.1|3757617_3758019_-	RidA family protein	NA	NA	NA	NA	NA
WP_003814993.1|3758043_3758478_-	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814996.1|3758479_3760129_-	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	31.2	2.6e-56
WP_010929731.1|3760169_3761339_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010929730.1|3761341_3762205_-	enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_010929729.1|3765568_3766273_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.2	1.1e-16
WP_003815010.1|3766266_3767061_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	23.5	2.6e-09
WP_003815011.1|3767057_3768023_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815013.1|3768026_3768947_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815015.1|3769043_3770207_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929728.1|3770429_3771320_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003815019.1|3771323_3771827_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929727.1|3771869_3772868_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930048.1|3772864_3773815_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_111735998.1|3773903_3774191_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|3774382_3775333_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566083.1|3775392_3775953_+	5'-3'-deoxyribonucleotidase	NA	A0A1E1EUN3	Acanthamoeba_castellanii_mimivirus	30.8	3.2e-14
WP_004566082.1|3777455_3778337_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929725.1|3778450_3779653_+	MFS transporter	NA	NA	NA	NA	NA
WP_003819105.1|3779781_3781641_-	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
WP_003819104.1|3781718_3782528_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010929724.1|3782598_3783600_+	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_003807710.1|3783631_3784492_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010929723.1|3784691_3785696_+	alpha/beta hydrolase	NA	A0A2L2DMU8	Acanthamoeba_polyphaga_mimivirus	31.5	7.5e-30
WP_003819100.1|3785692_3787279_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003807706.1|3787287_3788214_+	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA	NA
WP_003807705.1|3788236_3788863_+	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_005015810.1|3788961_3789912_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014906092.1|3789908_3791045_-|protease	trypsin-like serine protease	protease	W5SAB9	Pithovirus	31.2	1.2e-07
WP_010927226.1|3791098_3791875_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_010929721.1|3791899_3792358_-	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_003815815.1|3792497_3793139_+	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_003815816.1|3793203_3794586_+	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_010929720.1|3794611_3795460_+	cytochrome c1	NA	NA	NA	NA	NA
WP_003815819.1|3795618_3796230_+	stringent starvation protein A	NA	NA	NA	NA	NA
WP_003815821.1|3796239_3796689_+|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
>prophage 30
NZ_CP012130	Bordetella pertussis strain H639 chromosome, complete genome	4088698	3808312	3869201	4088698	protease,transposase,tRNA	uncultured_Caudovirales_phage(33.33%)	51	NA	NA
WP_005012067.1|3808312_3809263_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929711.1|3809993_3810974_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929710.1|3810987_3812112_+	CoA transferase	NA	NA	NA	NA	NA
WP_003814321.1|3812119_3813874_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_010929709.1|3813980_3814880_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814324.1|3814944_3815928_-	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
WP_010929708.1|3816063_3817044_+	AEC family transporter	NA	NA	NA	NA	NA
WP_010929707.1|3817060_3818452_-	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_010929706.1|3818603_3819140_+|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_019247543.1|3819070_3820456_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
WP_003814332.1|3820598_3821237_-	membrane protein	NA	NA	NA	NA	NA
WP_010929705.1|3821323_3823213_+	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
WP_003814337.1|3823209_3824151_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_003814339.1|3824256_3825306_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
WP_010929704.1|3825558_3826260_+	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_010929703.1|3826256_3826955_+	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_010929702.1|3826955_3828311_+	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
WP_010929701.1|3828307_3828799_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_003814351.1|3828817_3829774_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003814355.1|3831184_3833287_-	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_003814356.1|3833457_3834501_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814358.1|3834544_3835288_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814363.1|3836309_3836720_-	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA	NA
WP_010929700.1|3837669_3838467_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930742.1|3838565_3839516_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|3839512_3840463_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|3840549_3841500_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929681.1|3841614_3842616_-	HindIII family type II restriction endonuclease	NA	NA	NA	NA	NA
WP_010929682.1|3842706_3843273_-	preprotein translocase subunit SecD	NA	NA	NA	NA	NA
WP_010929683.1|3843591_3845505_+	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA	NA
WP_010929684.1|3845546_3846977_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_019247308.1|3847089_3848502_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_003818947.1|3848518_3849214_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|3849432_3850383_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929687.1|3850407_3851307_-	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_010929688.1|3851461_3852010_+	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929689.1|3852048_3852768_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_023994893.1|3852938_3855782_+	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_033446404.1|3856375_3859171_+|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
WP_010929692.1|3859628_3860561_+	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929693.1|3860672_3862022_+	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929694.1|3862053_3862779_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_033446325.1|3862829_3863612_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929696.1|3863810_3864497_+	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_003819086.1|3864496_3865141_+	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_003807674.1|3865197_3865473_+	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
WP_003807672.1|3865498_3865795_+	YciI family protein	NA	NA	NA	NA	NA
WP_010929697.1|3865840_3866620_+	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
WP_023853200.1|3866625_3867666_+	cyclase	NA	NA	NA	NA	NA
WP_010929699.1|3867770_3868094_-	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
WP_010931070.1|3868250_3869201_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 31
NZ_CP012130	Bordetella pertussis strain H639 chromosome, complete genome	4088698	3899584	3967407	4088698	transposase,tRNA	Bacillus_phage(22.22%)	58	NA	NA
WP_010929591.1|3899584_3900535_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003815898.1|3900741_3901218_+	bacterioferritin	NA	NA	NA	NA	NA
WP_010929663.1|3901299_3901983_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003815895.1|3902007_3903615_-	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
WP_010929661.1|3903663_3904293_-	LysE family transporter	NA	NA	NA	NA	NA
WP_010929660.1|3904326_3905757_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.8	5.8e-44
WP_003815889.1|3906039_3906669_+	LemA family protein	NA	NA	NA	NA	NA
WP_010929659.1|3906646_3907549_+	YgcG family protein	NA	NA	NA	NA	NA
WP_005015810.1|3908992_3909943_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995348.1|3910501_3912055_-	ubiquinone biosynthesis regulatory protein kinase UbiB	NA	A0A2N9QVT9	Dishui_lake_phycodnavirus	28.7	1.0e-33
WP_023853232.1|3912060_3912696_-	SCP-2 sterol transfer family protein	NA	NA	NA	NA	NA
WP_010929656.1|3912924_3913947_-	Tim44 domain-containing protein	NA	NA	NA	NA	NA
WP_003815111.1|3914112_3914889_-	bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	NA	NA	NA	NA	NA
WP_003815113.1|3915052_3915751_+	phosphate regulon transcriptional regulatory protein PhoB	NA	W8CYM9	Bacillus_phage	37.1	8.6e-33
WP_010929655.1|3915762_3917073_+	phosphate regulon sensor histidine kinase PhoR	NA	A0A1V0SGX0	Hokovirus	25.5	6.2e-16
WP_010929654.1|3917128_3917806_+	heavy metal response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.2	1.5e-29
WP_010929653.1|3917802_3919200_+	heavy metal sensor histidine kinase	NA	NA	NA	NA	NA
WP_010929652.1|3919305_3919767_+	DUF411 domain-containing protein	NA	NA	NA	NA	NA
WP_023853237.1|3919871_3921071_+	phosphoglycerate dehydrogenase	NA	A0A1V0SBV6	Catovirus	42.6	3.1e-91
WP_010929650.1|3921121_3921997_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815126.1|3922098_3922530_+	VOC family protein	NA	NA	NA	NA	NA
WP_010929649.1|3922554_3923283_+	5-oxoprolinase subunit PxpB	NA	NA	NA	NA	NA
WP_010929648.1|3923279_3924260_+	biotin-dependent carboxyltransferase	NA	NA	NA	NA	NA
WP_003815135.1|3925026_3925809_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929647.1|3925927_3926899_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247545.1|3926969_3927728_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247546.1|3927746_3928190_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003817676.1|3928210_3929023_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010929646.1|3929028_3929961_+	alpha/beta hydrolase fold domain-containing protein	NA	NA	NA	NA	NA
WP_010929645.1|3929944_3931168_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929644.1|3931255_3932038_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247146.1|3932090_3936053_-	FAD/FMN-binding oxidoreductase	NA	NA	NA	NA	NA
WP_003815155.1|3936799_3938308_+	threonine ammonia-lyase, biosynthetic	NA	NA	NA	NA	NA
WP_005012067.1|3938726_3939677_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929512.1|3940943_3941822_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023853394.1|3941849_3942134_-	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_023853393.1|3942244_3943684_-	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_010929640.1|3943682_3944330_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929639.1|3944756_3946457_+	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_010929638.1|3946547_3947801_-	amidase	NA	NA	NA	NA	NA
WP_019247800.1|3948694_3949084_+	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010929637.1|3949080_3950091_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_003815918.1|3950927_3951761_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_014905488.1|3951757_3952663_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.7	9.8e-21
WP_005012067.1|3952761_3953712_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929635.1|3953812_3954634_+	phosphodiesterase	NA	NA	NA	NA	NA
WP_010929634.1|3954739_3955780_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
WP_010929633.1|3955822_3957115_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003815927.1|3957125_3958001_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_003815929.1|3957997_3958798_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_010931363.1|3958873_3959890_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815930.1|3960172_3960490_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003815933.1|3960580_3960928_-	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
WP_023853376.1|3961215_3962898_+|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010927242.1|3962907_3963591_+	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_010929628.1|3963652_3964282_+	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_010929627.1|3964363_3965557_-	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_010929626.1|3966456_3967407_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 32
NZ_CP012130	Bordetella pertussis strain H639 chromosome, complete genome	4088698	3995230	4052678	4088698	transposase	uncultured_Mediterranean_phage(40.0%)	48	NA	NA
WP_041166334.1|3995230_3996175_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|3996249_3997200_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929607.1|3997196_3998606_-	signal recognition particle protein	NA	NA	NA	NA	NA
WP_010929606.1|3998711_3999554_+	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA	NA
WP_003807805.1|3999555_3999807_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003807804.1|3999895_4000477_+	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA	A0A1W6DX33	Sphingobium_phage	54.3	1.7e-05
WP_010929605.1|4000508_4001129_+	glutathione S-transferase	NA	NA	NA	NA	NA
WP_010929604.1|4001290_4003198_-	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	37.2	1.1e-117
WP_003816713.1|4004390_4004705_-	DUF1153 domain-containing protein	NA	NA	NA	NA	NA
WP_010929584.1|4004798_4005749_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929603.1|4006170_4007352_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247832.1|4007981_4009253_+	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_029443770.1|4009287_4010346_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_010929600.1|4010464_4010767_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_010929599.1|4010779_4011361_+	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_019248755.1|4011417_4012392_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929597.1|4012815_4013757_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929596.1|4013940_4014360_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929595.1|4014359_4015586_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_005012067.1|4016386_4017337_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|4017435_4018386_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994937.1|4018382_4019876_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_003815032.1|4019872_4022980_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931665.1|4022976_4026045_-	MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931666.1|4026041_4027292_-	MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_023853184.1|4027472_4028225_-	cell division protein ZapD	NA	NA	NA	NA	NA
WP_010931667.1|4028266_4028911_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_010931668.1|4028919_4029900_-	prepilin peptidase	NA	NA	NA	NA	NA
WP_003815047.1|4029999_4030743_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815049.1|4030825_4031173_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003815051.1|4031270_4032113_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_003815053.1|4032157_4033045_-	segregation/condensation protein A	NA	NA	NA	NA	NA
WP_003815055.1|4033071_4033260_-	DUF3460 family protein	NA	NA	NA	NA	NA
WP_010931669.1|4033357_4034815_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_010931670.1|4034801_4036328_+	glycerol kinase GlpK	NA	NA	NA	NA	NA
WP_003815061.1|4036346_4036814_-	membrane protein	NA	NA	NA	NA	NA
WP_010931671.1|4036813_4037836_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003815064.1|4037956_4038697_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	4.4e-35
WP_003815066.1|4038751_4039852_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815068.1|4039853_4041044_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815070.1|4041163_4042180_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	42.1	1.0e-71
WP_003815073.1|4042498_4043170_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	38.2	9.5e-29
WP_010927126.1|4043166_4044075_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_010931672.1|4044286_4044934_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA	NA
WP_033446142.1|4048794_4049862_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
WP_003815084.1|4049872_4050682_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815086.1|4050771_4051545_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_010930363.1|4051727_4052678_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
