The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP012131	Bordetella pertussis strain I150 chromosome, complete genome	4107430	27282	70036	4107430	transposase,tRNA	Synechococcus_phage(50.0%)	41	NA	NA
WP_010929577.1|27282_28233_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995007.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929578.1|28674_29109_-	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_019247164.1|29141_30359_-	thiolase family protein	NA	NA	NA	NA	NA
WP_010929580.1|30364_30862_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_019247165.1|31069_32005_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929582.1|32214_33006_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929583.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010929584.1|34625_35576_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814398.1|35572_36763_-	MFS transporter	NA	NA	NA	NA	NA
WP_010929585.1|37012_37924_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010929586.1|37925_40064_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003814404.1|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|41318_42212_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247766.1|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|42687_43218_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_010929588.1|43663_44614_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929589.1|45200_45749_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|45720_45957_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|46084_46978_+	AEC family transporter	NA	NA	NA	NA	NA
WP_010929590.1|48147_49395_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|49391_50006_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_010929591.1|50141_51092_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443813.1|51134_52391_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|53622_54357_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|54362_54953_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|54977_55667_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|55663_56425_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|56504_57404_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|57497_58448_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929595.1|59248_60475_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_047122776.1|60474_60888_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929597.1|61077_62019_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248755.1|62442_63417_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929599.1|63473_64055_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010929600.1|64067_64370_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_029443770.1|64488_65547_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_019247832.1|65581_66853_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010929603.1|67482_68664_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|69085_70036_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP012131	Bordetella pertussis strain I150 chromosome, complete genome	4107430	77634	136108	4107430	transposase,tRNA	Planktothrix_phage(22.22%)	54	NA	NA
WP_005012067.1|77634_78585_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166334.1|78659_79604_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929608.1|79600_81475_-	O-antigen biosynthesis protein WlbL	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
WP_003807102.1|82822_83527_-	O-antigen biosynthesis protein WlbI	NA	NA	NA	NA	NA
WP_010929609.1|83523_84696_-	O-antigen biosynthesis protein WlbH	NA	NA	NA	NA	NA
WP_010929610.1|84891_85485_-	O-antigen biosynthesis protein WlbG	NA	NA	NA	NA	NA
WP_010929611.1|85481_86714_-	O-antigen biosynthesis protein WlbF	NA	NA	NA	NA	NA
WP_010929612.1|86731_87991_-	O-antigen biosynthesis protein WlbE	NA	NA	NA	NA	NA
WP_010929613.1|88014_89103_-	O-antigen biosynthesis protein WlbD	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
WP_010929614.1|89110_90211_-	O-antigen biosynthesis protein WlbC	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
WP_003807114.1|90214_90790_-	O-antigen biosynthesis protein WlbB	NA	NA	NA	NA	NA
WP_003807115.1|90793_91846_-	O-antigen biosynthesis protein WlbA	NA	NA	NA	NA	NA
WP_010929615.1|91976_92984_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
WP_010929616.1|92985_94272_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
WP_003807124.1|94288_94444_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929617.1|94468_95272_-	type III pantothenate kinase	NA	NA	NA	NA	NA
WP_010929618.1|95268_96135_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_010929619.1|96209_97340_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003807131.1|97339_98179_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
WP_010929620.1|99111_99714_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_010929621.1|99743_100397_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003807138.1|100529_101786_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
WP_010929622.1|101833_102733_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_003818417.1|102808_103084_+	YbeD family protein	NA	NA	NA	NA	NA
WP_010929623.1|103091_103754_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
WP_003807146.1|103815_104817_+	lipoyl synthase	NA	NA	NA	NA	NA
WP_003807148.1|104831_105380_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
WP_010929624.1|105437_106334_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_010929625.1|106330_107392_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
WP_010929626.1|107427_108378_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929627.1|109277_110471_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_010929628.1|110552_111182_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_010927242.1|111243_111927_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_023853376.1|111936_113619_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003815933.1|113906_114254_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
WP_003815930.1|114344_114662_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|114944_115961_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815929.1|116036_116837_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003815927.1|116833_117709_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010929633.1|117719_119012_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929634.1|119054_120095_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
WP_010929635.1|120200_121022_-	phosphodiesterase	NA	NA	NA	NA	NA
WP_005012067.1|121122_122073_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905488.1|122171_123077_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.7	9.8e-21
WP_003815918.1|123073_123907_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010929637.1|124743_125754_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_019247800.1|125750_126140_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010929638.1|127033_128287_+	amidase	NA	NA	NA	NA	NA
WP_010929639.1|128377_130078_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_010929640.1|130504_131152_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853393.1|131150_132590_+	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_003815905.1|132682_132985_+	bacterioferritin-associated ferredoxin	NA	NA	NA	NA	NA
WP_010929512.1|133012_133891_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|135157_136108_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP012131	Bordetella pertussis strain I150 chromosome, complete genome	4107430	164892	225403	4107430	transposase,tRNA,protease	Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)	51	NA	NA
WP_005015810.1|164892_165843_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929659.1|167286_168189_-	YgcG family protein	NA	NA	NA	NA	NA
WP_003815889.1|168166_168796_-	LemA family protein	NA	NA	NA	NA	NA
WP_010929660.1|169078_170509_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.8	5.8e-44
WP_010929661.1|170542_171172_+	LysE family transporter	NA	NA	NA	NA	NA
WP_003815895.1|171220_172828_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
WP_010929663.1|172852_173536_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815898.1|173617_174094_-	bacterioferritin	NA	NA	NA	NA	NA
WP_010929591.1|174300_175251_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929664.1|176366_176894_+	META domain-containing protein	NA	NA	NA	NA	NA
WP_010929665.1|176985_177801_+	META and DUF4377 domain-containing protein	NA	NA	NA	NA	NA
WP_003808370.1|177861_178596_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_010929666.1|178633_180712_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
WP_003808374.1|180961_181234_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446322.1|181335_182421_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010929668.1|182424_184329_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA	NA
WP_014486044.1|184325_188000_+	translocation/assembly module TamB domain-containing protein	NA	NA	NA	NA	NA
WP_010929670.1|188060_188624_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
WP_003808385.1|188631_189054_-	VOC family protein	NA	NA	NA	NA	NA
WP_010929671.1|189081_189501_-	VOC family protein	NA	NA	NA	NA	NA
WP_076879599.1|189529_190003_-	GNAT family N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	31.1	2.2e-11
WP_003808391.1|190102_190600_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003808393.1|190754_193025_+	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA	NA
WP_010929672.1|193073_194306_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010929591.1|194404_195355_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929673.1|195457_196093_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.8e-83
WP_019248671.1|196089_196983_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_010929675.1|197377_198478_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_010929676.1|198559_198934_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_010929677.1|198993_201858_+	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
WP_010929678.1|202002_202743_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929679.1|202812_204024_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929680.1|204052_205021_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931070.1|205634_206585_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929699.1|206741_207065_+	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
WP_023853200.1|207169_208210_-	cyclase family protein	NA	NA	NA	NA	NA
WP_010929697.1|208215_208995_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
WP_003807672.1|209040_209337_-	YciI family protein	NA	NA	NA	NA	NA
WP_003807674.1|209362_209638_-	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
WP_003819086.1|209694_210339_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010929696.1|210338_211025_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010929695.1|211154_212006_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929694.1|212056_212782_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929693.1|212813_214163_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929692.1|214274_215207_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_033455792.1|215664_218460_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
WP_010929690.1|219053_221996_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_010929689.1|222067_222787_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_010929688.1|222825_223374_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929687.1|223528_224428_+	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_005012808.1|224452_225403_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP012131	Bordetella pertussis strain I150 chromosome, complete genome	4107430	233335	286923	4107430	transposase,tRNA,protease	Bacillus_phage(25.0%)	48	NA	NA
WP_005012067.1|233335_234286_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|234372_235323_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930742.1|235319_236270_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929700.1|236368_237166_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003814363.1|238115_238526_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_003814358.1|239547_240291_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814356.1|240334_241378_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814355.1|241548_243651_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_003814351.1|245061_246018_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929701.1|246036_246528_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_010929702.1|246524_247880_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
WP_010929703.1|247880_248579_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_010929704.1|248575_249277_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_003814339.1|249529_250579_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
WP_003814337.1|250684_251626_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_010929705.1|251622_253512_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
WP_003814332.1|253598_254237_+	VTT domain-containing protein	NA	NA	NA	NA	NA
WP_019247543.1|254379_255765_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
WP_010929706.1|255695_256232_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_010929707.1|256383_257775_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_010929708.1|257791_258772_-	AEC family transporter	NA	NA	NA	NA	NA
WP_003814324.1|258907_259891_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
WP_010929709.1|259955_260855_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814321.1|260961_262716_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_010929710.1|262723_263848_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929711.1|263861_264842_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|265572_266523_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929712.1|267082_267628_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929713.1|267711_269331_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004567834.1|269346_270501_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_003817696.1|270514_270640_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_010929714.1|270636_272388_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
WP_010929715.1|272384_274064_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
WP_010929716.1|274126_274675_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.3e-28
WP_010929717.1|275817_276096_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|277139_278090_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_173651708.1|278107_278254_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929718.1|278367_278529_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_010929719.1|278536_278677_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815821.1|279195_279645_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
WP_003815819.1|279654_280266_-	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_019247426.1|280424_281279_-	cytochrome c1	NA	NA	NA	NA	NA
WP_003815816.1|281298_282681_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_003815815.1|282745_283387_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_010929721.1|283526_283985_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_010927226.1|284009_284786_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_014906092.1|284839_285976_+	trypsin-like peptidase domain-containing protein	NA	W5SAB9	Pithovirus	31.2	1.2e-07
WP_005015810.1|285972_286923_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP012131	Bordetella pertussis strain I150 chromosome, complete genome	4107430	390856	448365	4107430	transposase	Orpheovirus(14.29%)	50	NA	NA
WP_005012067.1|390856_391807_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927231.1|391943_392861_+	reductase	NA	NA	NA	NA	NA
WP_003815842.1|392857_393106_+	glutaredoxin family protein	NA	NA	NA	NA	NA
WP_003815840.1|393102_394308_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486045.1|394380_395376_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486046.1|395398_396619_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486047.1|396615_397260_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248476.1|398990_399800_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486048.1|400104_401058_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	42.5	5.6e-59
WP_014486049.1|401156_402140_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486050.1|402066_402768_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486051.1|402816_403587_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_019247259.1|403583_404762_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486052.1|404929_406636_-	thiamine pyrophosphate-requiring protein	NA	NA	NA	NA	NA
WP_014486053.1|406632_407529_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486054.1|407569_409159_-	rhodanese homology domain-containing protein	NA	NA	NA	NA	NA
WP_003807867.1|409208_410201_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807865.1|410269_410869_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014486055.1|411329_412310_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929577.1|412385_413336_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122777.1|413424_414339_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929782.1|414335_414995_+	LysE family translocator	NA	NA	NA	NA	NA
WP_003814709.1|415084_416008_+	alpha/beta fold hydrolase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	27.2	4.8e-07
WP_010929783.1|416013_416469_-	multidrug/biocide efflux PACE transporter	NA	NA	NA	NA	NA
WP_010929784.1|416465_417569_-	ChbG/HpnK family deacetylase	NA	NA	NA	NA	NA
WP_157734656.1|417527_417797_+	GtrA family protein	NA	NA	NA	NA	NA
WP_010927086.1|417756_419376_-	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_003814720.1|419372_420431_-	glycosyltransferase family 2 protein	NA	I1TED8	Salmonella_phage	40.5	2.8e-59
WP_033446199.1|420560_421055_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_022997984.1|421147_422125_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929785.1|422320_423526_+	sodium/glutamate symporter	NA	NA	NA	NA	NA
WP_010929786.1|423522_425034_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_003814726.1|425049_426363_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_003814728.1|426553_426733_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814730.1|427142_427877_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
WP_010929577.1|430321_431272_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247421.1|431403_431802_-	GTP-binding protein	NA	E4ZFJ7	Streptococcus_phage	44.3	9.0e-19
WP_003814701.1|432212_432683_-	universal stress protein	NA	NA	NA	NA	NA
WP_003820700.1|432771_433116_-	TIGR01244 family phosphatase	NA	NA	NA	NA	NA
WP_010929788.1|433215_434616_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010929789.1|436404_436923_-	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	38.9	2.1e-12
WP_003814694.1|437033_437789_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	40.8	2.9e-42
WP_003814691.1|437984_439217_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929791.1|439209_439995_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_003814685.1|440061_441033_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003814681.1|441043_442021_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247419.1|442146_443319_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929793.1|443345_444374_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003814674.1|444439_445633_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_005012067.1|447414_448365_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
NZ_CP012131	Bordetella pertussis strain I150 chromosome, complete genome	4107430	589370	650561	4107430	transposase,protease	uncultured_Mediterranean_phage(40.0%)	56	NA	NA
WP_005013747.1|589370_590321_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023998122.1|590817_591687_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_010931496.1|591683_592505_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_019247235.1|592704_593196_+	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_019247236.1|593214_594288_+	CHAD domain-containing protein	NA	NA	NA	NA	NA
WP_023853086.1|594334_595438_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
WP_003808577.1|595513_596134_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_003808574.1|596154_596664_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	42.1	1.2e-28
WP_003808570.1|596718_596970_+	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	53.4	1.6e-18
WP_010931494.1|597033_598167_+	benzoate/H(+) symporter BenE family transporter	NA	NA	NA	NA	NA
WP_003808567.1|598174_598561_-	MOSC N-terminal beta barrel domain-containing protein	NA	NA	NA	NA	NA
WP_010931493.1|598557_601077_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003808563.1|601505_601844_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003808562.1|601840_602347_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_010931492.1|602408_603209_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931491.1|603319_604261_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931490.1|604354_605890_-	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931489.1|607569_609420_-	dipeptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.2	1.6e-17
WP_003808549.1|609423_610257_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931488.1|610256_611198_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931487.1|611449_612421_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931486.1|612562_614851_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003808542.1|615157_616066_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010931485.1|616120_617086_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_062810229.1|617160_618822_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_010931483.1|618893_619604_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_154698388.1|619570_619735_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|619752_620703_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814152.1|621401_621785_+	membrane protein	NA	NA	NA	NA	NA
WP_010927005.1|621842_622445_+	DUF2946 family protein	NA	NA	NA	NA	NA
WP_003820995.1|622462_622864_-	DoxX family protein	NA	NA	NA	NA	NA
WP_003814158.1|622997_623891_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931481.1|623887_624469_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_003814165.1|625263_625998_+	arginyltransferase	NA	NA	NA	NA	NA
WP_010931480.1|626038_627088_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_003814172.1|627235_627814_-	TIGR01841 family phasin	NA	NA	NA	NA	NA
WP_010931479.1|628200_629178_+	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA	NA
WP_010931478.1|629271_633666_-	dermonecrotic toxin	NA	NA	NA	NA	NA
WP_003814178.1|633866_634715_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931477.1|634873_635686_-	competence/damage-inducible protein A	NA	NA	NA	NA	NA
WP_005015810.1|635741_636692_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931453.1|636790_637591_-	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_003814185.1|637652_638036_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_010931454.1|638047_639481_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	1.5e-52
WP_003814188.1|639687_640017_-	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_010931455.1|640019_640769_-	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010931456.1|640951_641872_+	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_003814195.1|641918_642131_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931457.1|642153_642576_+	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_010931458.1|642592_643693_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931459.1|643789_645307_-|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_003814203.1|645382_646222_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_003814205.1|646243_647125_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814206.1|647206_648301_-	porin	NA	NA	NA	NA	NA
WP_076879617.1|648594_649545_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166340.1|649619_650561_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
NZ_CP012131	Bordetella pertussis strain I150 chromosome, complete genome	4107430	655885	702076	4107430	transposase,terminase,tRNA,tail	uncultured_Caudovirales_phage(18.18%)	51	NA	NA
WP_023995141.1|655885_656911_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814221.1|656951_657191_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931464.1|657260_658850_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_010931465.1|658849_659398_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_003814226.1|659478_660051_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010927008.1|660069_660981_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814230.1|661054_662023_-	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010931466.1|662145_663219_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_010931467.1|663223_665044_-	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_010930800.1|665120_666071_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446132.1|666159_666495_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_003819076.1|666628_667279_+	carbonic anhydrase	NA	NA	NA	NA	NA
WP_010931468.1|667300_668719_-	amidase	NA	NA	NA	NA	NA
WP_019248554.1|668788_669544_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247734.1|669512_670271_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931471.1|670281_671163_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931472.1|671179_671887_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931473.1|671889_672648_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931474.1|672857_674600_+	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010925795.1|674592_675117_+	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931475.1|675156_675951_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248926.1|676118_677192_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|677290_678241_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247378.1|678492_678699_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931451.1|678770_679382_-	S24 family peptidase	NA	NA	NA	NA	NA
WP_023853179.1|679936_680188_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_161633094.1|680180_680870_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853183.1|680887_681109_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|681126_682077_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247942.1|682716_683202_+|transposase	transposase	transposase	C7U0W1	Enterobacteria_phage	61.5	7.3e-39
WP_010931447.1|683188_684466_+|terminase	terminase large subunit	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_010931446.1|684468_685887_+	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931445.1|685915_686971_+	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931444.1|686976_687219_+	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931443.1|687341_687944_+	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_005012808.1|688372_689323_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931442.1|689997_690249_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|690311_690794_+	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_010931440.1|690795_690996_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931439.1|690995_691391_+	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_010931438.1|691387_691786_+	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931437.1|691782_692205_+	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_010931436.1|692212_692713_+	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931435.1|692967_693486_+|tail	phage tail protein	tail	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_003813412.1|693495_693825_+|tail	phage tail assembly chaperone	tail	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931434.1|693842_694133_+	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_010931433.1|694158_696771_+|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931432.1|696780_697140_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931431.1|697207_697741_+	DUF1833 family protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931430.1|697737_698127_+	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931429.1|698119_702076_+	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
>prophage 8
NZ_CP012131	Bordetella pertussis strain I150 chromosome, complete genome	4107430	708242	762172	4107430	transposase,tRNA	Planktothrix_phage(50.0%)	46	NA	NA
WP_003814636.1|708242_709973_+|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
WP_010931419.1|710025_710454_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814641.1|710456_711137_+	protein TolQ	NA	NA	NA	NA	NA
WP_003814643.1|711136_711595_+	protein TolR	NA	NA	NA	NA	NA
WP_010931418.1|711631_712606_+	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_010931417.1|712622_713939_+	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_003814650.1|713970_714468_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_003814652.1|714554_715244_+	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_010931416.1|715243_716293_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003814657.1|716289_717084_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
WP_019247923.1|717252_717603_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247922.1|717578_718136_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012808.1|719265_720216_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929184.1|722353_723583_+	spore maturation protein	NA	NA	NA	NA	NA
WP_003814419.1|723585_725028_-	pyruvate kinase	NA	NA	NA	NA	NA
WP_010931414.1|725132_726278_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_010931413.1|726309_727107_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931412.1|727131_728691_-	chaperone SurA	NA	NA	NA	NA	NA
WP_010931411.1|728687_731060_-	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931410.1|731169_732273_+	phosphotransferase	NA	NA	NA	NA	NA
WP_010931409.1|732272_732965_+	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_003814436.1|733108_733810_+	membrane protein	NA	NA	NA	NA	NA
WP_003814437.1|733794_734172_-	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_005012067.1|734903_735854_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814441.1|736013_736886_-	oxaloacetate decarboxylase	NA	NA	NA	NA	NA
WP_003814443.1|737226_737445_+	DUF1059 domain-containing protein	NA	NA	NA	NA	NA
WP_019247242.1|737484_738864_-	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_010929976.1|738905_740303_-	amidase family protein	NA	NA	NA	NA	NA
WP_010927038.1|740342_741995_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.8	6.0e-16
WP_010929977.1|741998_742883_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929978.1|742882_743824_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929979.1|743902_745522_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929980.1|745688_746504_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814459.1|746571_747141_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|747141_748092_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814461.1|748746_749844_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_003814462.1|749877_751143_+	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929591.1|751300_752251_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929982.1|752494_753085_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_010929983.1|753100_755545_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_003814467.1|755664_756636_-	FecR family protein	NA	NA	NA	NA	NA
WP_023852739.1|756767_757292_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_005012067.1|757251_758202_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929984.1|758423_760619_-	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_010929985.1|760691_761120_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012808.1|761221_762172_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP012131	Bordetella pertussis strain I150 chromosome, complete genome	4107430	853050	902314	4107430	transposase,holin	Vibrio_phage(33.33%)	40	NA	NA
WP_010929591.1|853050_854001_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247352.1|854018_854573_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813949.1|854574_855009_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003813951.1|855005_855440_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003813952.1|855423_856227_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_003813954.1|856243_857059_-	metallophosphoesterase	NA	NA	NA	NA	NA
WP_019248500.1|857055_857871_-	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_010930033.1|858017_858719_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813960.1|858746_860705_-|holin	choline BCCT transporter BetT	holin	A0A2I7QNT1	Vibrio_phage	30.3	8.0e-28
WP_005013747.1|860787_861738_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930032.1|861958_862627_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_010930031.1|862750_863857_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_010930030.1|863869_866983_+	MexW/MexI family multidrug efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	21.5	4.5e-57
WP_010930029.1|866979_868473_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010926969.1|868487_869159_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_003813974.1|869202_869697_-	azurin	NA	NA	NA	NA	NA
WP_010930027.1|869837_870485_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_023853163.1|870588_872637_+	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010930025.1|872633_874646_+	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010930024.1|874671_876006_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_003813981.1|876114_877107_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813982.1|877173_879258_-	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
WP_010930023.1|879282_880254_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930022.1|880382_881414_-	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA	NA
WP_010930021.1|881417_882569_-	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_076879542.1|882739_883663_+	transcriptional regulator LrhA	NA	NA	NA	NA	NA
WP_003813987.1|883740_884565_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_023994644.1|884761_885778_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003813988.1|885974_886958_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930019.1|888556_889945_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003813991.1|889975_890965_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813992.1|891075_892308_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003813993.1|892589_893390_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930018.1|893412_895644_-|holin	choline BCCT transporter BetT	holin	NA	NA	NA	NA
WP_010930017.1|896431_896878_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_003813996.1|896899_897646_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_003813997.1|897789_898767_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
WP_010930016.1|899400_900012_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
WP_003813999.1|900005_901223_-	threonine ammonia-lyase	NA	NA	NA	NA	NA
WP_005013747.1|901363_902314_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP012131	Bordetella pertussis strain I150 chromosome, complete genome	4107430	911926	976866	4107430	transposase	Bacillus_phage(18.18%)	58	NA	NA
WP_005012067.1|911926_912877_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930051.1|912873_914706_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
WP_010930052.1|915104_915764_+	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
WP_023852837.1|915857_916004_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003809770.1|916112_916280_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930054.1|916291_916972_-	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_010930055.1|917253_917970_+	flagellar brake protein	NA	NA	NA	NA	NA
WP_010930056.1|917984_919286_-	phospholipase A	NA	NA	NA	NA	NA
WP_029444137.1|921430_924319_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010930057.1|924542_925895_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_004568140.1|925923_926445_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_003819989.1|926441_927896_+	carboxylase	NA	NA	NA	NA	NA
WP_023852826.1|927930_928179_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247557.1|928284_929160_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010930060.1|929185_930241_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930061.1|930253_931045_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930062.1|931077_932448_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_005012067.1|933624_934575_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930064.1|934627_934849_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810832.1|935008_935221_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|935340_936459_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810839.1|936964_937216_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930066.1|937328_938279_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810840.1|938275_938659_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_023852913.1|938713_940528_-	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
WP_010930068.1|940677_941505_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
WP_010930069.1|941550_942531_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_003810850.1|942527_942740_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810851.1|942736_943918_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_019248496.1|944081_944816_+	metallophosphoesterase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
WP_010930071.1|944817_947430_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_003810859.1|947565_949479_-	S9 family peptidase	NA	NA	NA	NA	NA
WP_010930072.1|950094_950505_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003810865.1|950602_951688_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_005012067.1|951786_952737_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930088.1|952733_953708_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003821497.1|953832_954744_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
WP_004566317.1|955020_955413_-	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
WP_005012808.1|955542_956493_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930090.1|956522_956705_-	type II toxin-antitoxin system HicA family toxin	NA	A0A1L2JY37	Aeribacillus_phage	56.1	3.7e-12
WP_010930091.1|957477_958659_-	MFS transporter	NA	NA	NA	NA	NA
WP_010930092.1|958874_959552_-	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_010930093.1|959548_960274_-	bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase	NA	NA	NA	NA	NA
WP_010930094.1|960399_960981_-	OmpA family protein	NA	NA	NA	NA	NA
WP_010930095.1|961351_964033_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	3.2e-104
WP_010930096.1|964032_965166_+	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	44.0	6.4e-78
WP_010930097.1|965158_966244_+	prephenate dehydratase	NA	NA	NA	NA	NA
WP_010930098.1|966330_967230_+	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010930099.1|967226_968555_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_010930100.1|968569_969241_+	(d)CMP kinase	NA	NA	NA	NA	NA
WP_010930101.1|969428_971144_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_010930102.1|971145_971505_+	integration host factor subunit beta	NA	NA	NA	NA	NA
WP_010930103.1|971696_972011_+	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
WP_010930104.1|972053_973274_+	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
WP_010930105.1|973270_974212_+	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A2H4N7X4	Lake_Baikal_phage	28.1	1.5e-16
WP_003821513.1|974208_975198_+	ADP-glyceromanno-heptose 6-epimerase	NA	E3SJ87	Synechococcus_phage	34.4	2.2e-26
WP_033446303.1|975232_975817_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|975915_976866_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_CP012131	Bordetella pertussis strain I150 chromosome, complete genome	4107430	996266	1059417	4107430	transposase	Enterococcus_phage(16.67%)	54	NA	NA
WP_005012067.1|996266_997217_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930118.1|997321_998371_+	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
WP_010929632.1|998508_999525_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010926548.1|1001033_1001606_-	chorismate lyase	NA	NA	NA	NA	NA
WP_010930119.1|1001665_1002397_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_029443805.1|1002448_1003366_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930121.1|1004173_1007353_+	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_014486063.1|1007349_1008732_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010930123.1|1008801_1009053_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_010930124.1|1009198_1009813_-	SCO family protein	NA	NA	NA	NA	NA
WP_019248379.1|1009999_1012114_-	M3 family metallopeptidase	NA	NA	NA	NA	NA
WP_003811948.1|1012189_1013041_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
WP_010930126.1|1013037_1013664_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003817147.1|1013660_1015415_-	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_010930127.1|1015707_1018413_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_010930128.1|1018425_1020087_+	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
WP_010930129.1|1020099_1021890_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
WP_003817151.1|1022111_1023287_-	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_010929584.1|1023329_1024280_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930130.1|1024378_1025119_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_010930131.1|1025313_1027350_+	transketolase	NA	NA	NA	NA	NA
WP_010930132.1|1027367_1028378_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_010930133.1|1028495_1029689_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_010930134.1|1029718_1030492_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010930135.1|1030488_1031679_-	acetate kinase	NA	NA	NA	NA	NA
WP_003809454.1|1031704_1032643_-	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_010930136.1|1032639_1034988_-	DUF3141 domain-containing protein	NA	NA	NA	NA	NA
WP_010930137.1|1035142_1035784_-	glutathione transferase	NA	NA	NA	NA	NA
WP_023853531.1|1035887_1037021_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994624.1|1037113_1037266_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930138.1|1037297_1037846_-	DinB family protein	NA	NA	NA	NA	NA
WP_003819814.1|1037864_1038350_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930139.1|1038527_1039466_+	DnaJ domain-containing protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
WP_003809467.1|1039468_1039786_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247197.1|1039831_1040776_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010930141.1|1042456_1043107_+	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
WP_003809479.1|1043160_1043496_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930142.1|1043492_1044353_+	M23 family metallopeptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
WP_003819817.1|1044369_1044651_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003809486.1|1044724_1044988_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_005012067.1|1045231_1046182_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811933.1|1046480_1047218_-	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
WP_010930143.1|1047653_1047977_+	flagellar transcriptional regulator FlhD	NA	NA	NA	NA	NA
WP_003811929.1|1048011_1048572_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
WP_003811927.1|1048692_1049568_+	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
WP_003817154.1|1049580_1050528_+	flagellar motor protein MotB	NA	NA	NA	NA	NA
WP_019247393.1|1050629_1050923_+	response regulator	NA	NA	NA	NA	NA
WP_010930144.1|1050949_1053007_+	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_003811919.1|1053021_1053522_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_010930145.1|1053595_1055302_+	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
WP_010930146.1|1056165_1057218_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_003811911.1|1057270_1057660_+	chemotaxis response regulator CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
WP_003817162.1|1057668_1058301_+	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_010931363.1|1058400_1059417_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_CP012131	Bordetella pertussis strain I150 chromosome, complete genome	4107430	1065401	1125464	4107430	transposase,tRNA,holin,protease	uncultured_Mediterranean_phage(37.5%)	50	NA	NA
WP_015041211.1|1065401_1066829_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010931363.1|1067766_1068783_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003809411.1|1069115_1070051_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.5	3.0e-41
WP_010930154.1|1070100_1071981_-	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_003809416.1|1072047_1072392_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.4	1.0e-10
WP_010930155.1|1072536_1073673_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
WP_023853534.1|1073669_1074743_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_003809423.1|1074900_1076337_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_010930157.1|1076427_1077069_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_023853536.1|1077404_1078421_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_005012808.1|1080463_1081414_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930160.1|1082616_1084038_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_003809431.1|1084301_1085018_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003809432.1|1085102_1085420_+	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003819794.1|1085460_1085874_+|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_010930161.1|1085875_1086235_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853525.1|1086277_1087822_-	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
WP_010930163.1|1087905_1088736_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_010930164.1|1088770_1089925_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_010930165.1|1089967_1090840_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486065.1|1090956_1093245_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003809441.1|1094451_1094916_+	barstar family protein	NA	NA	NA	NA	NA
WP_005013747.1|1094942_1095893_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154698393.1|1095910_1096048_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930167.1|1096260_1097037_-	phosphate ABC transporter ATP-binding protein PstB	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
WP_003809638.1|1097081_1097939_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_010930169.1|1097960_1098977_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_014486066.1|1099111_1100152_-	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
WP_010930171.1|1100346_1102428_-	polyphosphate kinase 1	NA	NA	NA	NA	NA
WP_010930172.1|1102663_1104157_+	exopolyphosphatase	NA	NA	NA	NA	NA
WP_003809629.1|1104387_1105182_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003819875.1|1105402_1106761_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_010930173.1|1106757_1107600_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
WP_010930174.1|1107618_1109505_-|protease	ATP-dependent zinc metalloprotease FtsH	protease	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
WP_162096758.1|1109446_1109698_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930175.1|1109742_1110375_-	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
WP_003809618.1|1110393_1110996_+	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|1111147_1112098_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_161633091.1|1112678_1113386_+	DUF192 domain-containing protein	NA	NA	NA	NA	NA
WP_003812707.1|1113744_1114731_-	homoserine kinase	NA	NA	NA	NA	NA
WP_010930178.1|1114870_1115884_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_005012067.1|1115880_1116831_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_155120815.1|1116848_1116989_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003812703.1|1116943_1117402_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003812701.1|1117438_1118752_-	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_010930180.1|1118769_1119141_+	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
WP_019248549.1|1119137_1120601_+	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
WP_010930182.1|1120741_1121470_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_010930183.1|1121451_1124301_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010929591.1|1124513_1125464_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP012131	Bordetella pertussis strain I150 chromosome, complete genome	4107430	1156530	1218701	4107430	transposase,tRNA	Erysipelothrix_phage(33.33%)	50	NA	NA
WP_010930198.1|1156530_1157481_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248935.1|1157579_1158203_-	serotype 2 fimbrial subunit	NA	NA	NA	NA	NA
WP_010930200.1|1158376_1160659_-	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_010930201.1|1160813_1163510_-	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA	NA
WP_010930202.1|1163635_1164124_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813631.1|1166534_1169405_+	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_010930204.1|1169450_1170665_+	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_003813626.1|1170894_1172322_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	2.1e-41
WP_023853245.1|1172419_1173511_+	cell division protein ZapE	NA	NA	NA	NA	NA
WP_010930206.1|1173523_1174282_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003813621.1|1174369_1175272_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|1175268_1176219_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930207.1|1176348_1177332_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813618.1|1177386_1178109_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930211.1|1179587_1180943_+|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930212.1|1181023_1183399_-	RNA-binding transcriptional accessory protein Tex	NA	NA	NA	NA	NA
WP_010930213.1|1183563_1185639_+	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	30.0	2.4e-75
WP_003813594.1|1185700_1186501_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_010930214.1|1186602_1187565_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_019247742.1|1187552_1188308_+	peptidoglycan editing factor PgeF	NA	NA	NA	NA	NA
WP_010930216.1|1188415_1190053_+	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA	NA
WP_003813586.1|1190120_1190858_+	acetoacetyl-CoA reductase	NA	NA	NA	NA	NA
WP_003813585.1|1190960_1191536_+	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA	NA
WP_010930217.1|1191708_1192245_+	iron transporter	NA	NA	NA	NA	NA
WP_003813580.1|1192247_1192592_+	cupredoxin domain-containing protein	NA	NA	NA	NA	NA
WP_010930218.1|1192607_1193453_+	FTR1 family protein	NA	NA	NA	NA	NA
WP_003821443.1|1193491_1194871_+	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_003813574.1|1194948_1195830_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_010929956.1|1195928_1196879_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811632.1|1196875_1197286_-	VOC family protein	NA	NA	NA	NA	NA
WP_010930219.1|1197393_1198248_-	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_003811636.1|1198240_1199203_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930220.1|1199248_1200373_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	Q6A202	Oenococcus_phage	28.3	1.5e-31
WP_019247966.1|1200478_1201357_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930222.1|1201481_1202261_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930223.1|1202414_1203836_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930224.1|1204270_1205968_+	sodium:solute symporter family protein	NA	NA	NA	NA	NA
WP_010930225.1|1206194_1207136_-	LD-carboxypeptidase	NA	NA	NA	NA	NA
WP_010930226.1|1207462_1208209_+	aldolase	NA	NA	NA	NA	NA
WP_033446252.1|1208216_1209143_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930228.1|1209264_1210182_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003811660.1|1210221_1211175_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811662.1|1211199_1211778_+	amino acid synthesis family protein	NA	NA	NA	NA	NA
WP_010930229.1|1213451_1214060_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930230.1|1214137_1214491_-	NirD/YgiW/YdeI family stress tolerance protein	NA	NA	NA	NA	NA
WP_010930231.1|1214574_1215564_-	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA	NA
WP_023852977.1|1215560_1215749_-	hypothetical protein	NA	NA	NA	NA	NA
WP_076879566.1|1215766_1216717_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|1216803_1217754_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931070.1|1217750_1218701_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP012131	Bordetella pertussis strain I150 chromosome, complete genome	4107430	1269629	1326840	4107430	transposase	Klosneuvirus(16.67%)	49	NA	NA
WP_010931070.1|1269629_1270580_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931041.1|1274326_1274938_-	DUF2239 family protein	NA	NA	NA	NA	NA
WP_003812368.1|1275160_1276621_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.3	1.6e-97
WP_010931040.1|1276717_1278310_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	33.3	1.0e-17
WP_019247974.1|1278663_1278921_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003816876.1|1278922_1280263_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010931038.1|1280358_1281048_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247976.1|1281060_1282491_+	MFS transporter	NA	NA	NA	NA	NA
WP_014905903.1|1284215_1285037_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931036.1|1285047_1286619_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010931035.1|1286647_1287625_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931034.1|1287651_1288455_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.2	2.7e-30
WP_010931033.1|1288451_1289246_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003816890.1|1289253_1290489_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_010931032.1|1290481_1290916_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|1291665_1292616_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931031.1|1293237_1294965_-	sulfate permease	NA	NA	NA	NA	NA
WP_010931030.1|1295076_1296435_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_023853289.1|1296491_1296710_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1296727_1297678_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931029.1|1297718_1298789_+	FUSC family protein	NA	NA	NA	NA	NA
WP_010931028.1|1298811_1299690_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931027.1|1299861_1300833_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931026.1|1300995_1301838_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931025.1|1301999_1302680_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010931024.1|1302673_1303843_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931023.1|1303839_1304871_+	alcohol dehydrogenase catalytic domain-containing protein	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
WP_010931022.1|1304914_1306156_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931021.1|1306190_1307723_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010931020.1|1307803_1308427_+	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_010931019.1|1308457_1309069_+	LysE family translocator	NA	NA	NA	NA	NA
WP_010931018.1|1309104_1309575_+	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
WP_019248147.1|1310006_1311011_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931017.1|1311047_1312562_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931016.1|1312565_1313525_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931015.1|1313553_1314357_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931014.1|1314358_1315993_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
WP_010931013.1|1316076_1317138_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_004567322.1|1317336_1317606_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931012.1|1317609_1318134_+	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
WP_010929591.1|1318549_1319500_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931011.1|1319496_1320531_-	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_003816758.1|1320639_1321278_+	DedA family protein	NA	NA	NA	NA	NA
WP_019247724.1|1321572_1321800_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003820420.1|1321922_1322636_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_005013747.1|1322880_1323831_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931009.1|1323934_1324216_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931008.1|1324330_1325779_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_005012808.1|1325889_1326840_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP012131	Bordetella pertussis strain I150 chromosome, complete genome	4107430	1417073	1469226	4107430	transposase,tRNA	Salmonella_phage(25.0%)	46	NA	NA
WP_005013747.1|1417073_1418024_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023999730.1|1418041_1418194_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814065.1|1418190_1418544_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814063.1|1418556_1418919_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814061.1|1418960_1419386_-	DUF1841 family protein	NA	NA	NA	NA	NA
WP_003814059.1|1419588_1420845_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	64.8	1.2e-11
WP_003814057.1|1421043_1422024_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005015028.1|1422173_1423415_+	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1423513_1424464_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814052.1|1424472_1425168_-	two-component system response regulator KdpE	NA	NA	NA	NA	NA
WP_003814050.1|1427989_1428589_-	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
WP_010930950.1|1428599_1430765_-	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	27.1	1.2e-24
WP_010930949.1|1430788_1432573_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA	NA
WP_017685545.1|1432572_1432662_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_003814042.1|1433356_1433629_+	DUF4212 domain-containing protein	NA	NA	NA	NA	NA
WP_003814040.1|1433628_1435695_+	cation acetate symporter	NA	NA	NA	NA	NA
WP_010929577.1|1435691_1436642_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|1436740_1437691_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005015014.1|1437806_1438139_-	multidrug transporter	NA	NA	NA	NA	NA
WP_010929073.1|1438135_1438822_-	Smr/MutS family protein	NA	NA	NA	NA	NA
WP_010930948.1|1438808_1439768_-	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
WP_003814032.1|1439809_1442170_+	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
WP_010930946.1|1442169_1442802_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_010930945.1|1442903_1444244_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
WP_010930944.1|1444290_1445646_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
WP_170954289.1|1445771_1446416_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814024.1|1446360_1446678_-	virulence factor	NA	NA	NA	NA	NA
WP_003814023.1|1446950_1447466_-	hypothetical protein	NA	T1SAR8	Salmonella_phage	44.6	5.1e-06
WP_003814022.1|1447559_1447721_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814021.1|1447736_1448492_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_019247690.1|1448830_1449037_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814020.1|1449044_1449704_-	NAAT family transporter	NA	NA	NA	NA	NA
WP_010930941.1|1449998_1452203_-	TonB-dependent alcaligin siderophore receptor FauA	NA	NA	NA	NA	NA
WP_010930940.1|1452313_1453537_-	alcaligin siderophore export MFS transporter Bcr	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
WP_003814017.1|1453659_1454634_-	alcaligin siderophore biosynthesis transcriptional regulator AlcR	NA	NA	NA	NA	NA
WP_005013753.1|1454701_1455895_-	alcaligin siderophore biosynthesis protein AlcE	NA	NA	NA	NA	NA
WP_003814016.1|1455909_1456710_-	alcaligin siderophore biosynthesis protein AlcD	NA	NA	NA	NA	NA
WP_010930939.1|1456706_1458563_-	alcaligin siderophore biosynthesis protein AlcC	NA	NA	NA	NA	NA
WP_003814014.1|1458559_1459165_-	alcaligin siderophore biosynthesis protein AlcB	NA	NA	NA	NA	NA
WP_003814013.1|1459183_1460569_-	alcaligin siderophore biosynthesis protein AlcA	NA	NA	NA	NA	NA
WP_003814012.1|1461294_1462521_+	cation:proton antiporter	NA	NA	NA	NA	NA
WP_003814011.1|1462609_1463392_+	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|1463490_1464441_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814010.1|1464467_1465241_+	peroxide stress protein YaaA	NA	NA	NA	NA	NA
WP_003814009.1|1465252_1466494_+	MFS transporter	NA	NA	NA	NA	NA
WP_076879548.1|1468275_1469226_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
NZ_CP012131	Bordetella pertussis strain I150 chromosome, complete genome	4107430	1513151	1581235	4107430	transposase,tRNA	Streptococcus_virus(11.11%)	59	NA	NA
WP_010930416.1|1513151_1513640_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_019248504.1|1513757_1514336_+	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010930418.1|1514441_1514810_+	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|1514908_1515859_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994932.1|1515865_1516978_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
WP_010930419.1|1517664_1518867_+	MFS transporter	NA	NA	NA	NA	NA
WP_004568212.1|1518902_1519049_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930420.1|1519070_1521731_+	PD-(D/E)XK nuclease family protein	NA	NA	NA	NA	NA
WP_010930421.1|1521743_1525148_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_023995689.1|1525815_1528041_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.5	1.2e-43
WP_010930423.1|1528087_1528414_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_010930424.1|1528464_1529073_+	recombination protein RecR	NA	NA	NA	NA	NA
WP_005013747.1|1529171_1530122_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930425.1|1530191_1530956_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930426.1|1530952_1531552_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930427.1|1531655_1532507_-	neutral zinc metallopeptidase	NA	A0A1I9SA48	Rhodococcus_phage	35.3	7.0e-37
WP_010928449.1|1532566_1533193_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
WP_005012067.1|1533189_1534140_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019249265.1|1534238_1535351_-	DUF1513 domain-containing protein	NA	NA	NA	NA	NA
WP_019248041.1|1535340_1536342_-	imelysin family protein	NA	NA	NA	NA	NA
WP_019247498.1|1536447_1537959_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_023853587.1|1537955_1539260_-	imelysin	NA	NA	NA	NA	NA
WP_010930431.1|1539371_1539932_-	membrane protein	NA	NA	NA	NA	NA
WP_010930432.1|1540199_1540754_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	32.0	1.7e-15
WP_010930433.1|1541209_1541425_-	dodecin domain-containing protein	NA	NA	NA	NA	NA
WP_033446228.1|1541679_1544277_+	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	22.6	1.5e-21
WP_010930435.1|1544273_1545461_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010930436.1|1546117_1546732_+	serotype 3 fimbrial subunit	NA	NA	NA	NA	NA
WP_010930437.1|1546820_1547948_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA	NA
WP_033446216.1|1547959_1548865_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_005012067.1|1549757_1550708_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930439.1|1550889_1551642_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
WP_003811112.1|1551710_1552370_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
WP_003811113.1|1552366_1553095_+	glutamine ABC transporter ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	39.3	3.3e-35
WP_010930440.1|1553107_1555387_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	32.1	5.9e-06
WP_010930441.1|1555411_1555615_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_010930442.1|1555656_1556289_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	33.9	2.4e-13
WP_010930443.1|1556424_1557342_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_010930444.1|1557338_1558052_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_003811135.1|1558289_1559060_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003811137.1|1559064_1559664_-	C40 family peptidase	NA	A0A0A8WF62	Clostridium_phage	41.6	1.4e-20
WP_003811138.1|1559908_1561399_+	AMP nucleosidase	NA	NA	NA	NA	NA
WP_010926696.1|1561457_1561742_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930445.1|1561879_1562035_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811148.1|1562307_1563234_-	YicC family protein	NA	NA	NA	NA	NA
WP_003811149.1|1563370_1564111_+	ribonuclease PH	NA	NA	NA	NA	NA
WP_010930446.1|1564277_1565654_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003811152.1|1565835_1566741_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930448.1|1568392_1570195_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010930449.1|1570321_1570963_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA	NA
WP_005012808.1|1571061_1572012_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930450.1|1572033_1573254_+	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
WP_003811164.1|1573439_1574852_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_003811167.1|1574915_1575983_+	PAS domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
WP_010930451.1|1575982_1577470_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
WP_010930452.1|1577479_1578424_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811176.1|1578583_1579282_+	pirin family protein	NA	NA	NA	NA	NA
WP_010930453.1|1579359_1580265_+	pirin family protein	NA	NA	NA	NA	NA
WP_005012067.1|1580284_1581235_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
NZ_CP012131	Bordetella pertussis strain I150 chromosome, complete genome	4107430	1617184	1672775	4107430	transposase	Brazilian_cedratvirus(25.0%)	47	NA	NA
WP_005013747.1|1617184_1618135_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930486.1|1618193_1618967_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486074.1|1618959_1620516_+	LTA synthase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1620512_1621463_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810741.1|1622789_1623392_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810743.1|1623631_1624333_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003816696.1|1624326_1625109_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_005012808.1|1625293_1626244_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930483.1|1626342_1627080_-	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_010926609.1|1627269_1628028_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930482.1|1628074_1629064_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930481.1|1629241_1630210_-	transporter	NA	NA	NA	NA	NA
WP_010930480.1|1631749_1632718_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930479.1|1632726_1633668_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|1634141_1635152_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930477.1|1635142_1636657_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930476.1|1636653_1638000_+	BatD family protein	NA	NA	NA	NA	NA
WP_010930475.1|1638002_1639037_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_023852967.1|1639086_1640712_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_005012067.1|1641264_1642215_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930487.1|1642319_1643267_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247865.1|1643320_1645135_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_010930489.1|1645127_1645802_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_023995112.1|1645931_1649006_+	autotransporter SphB2	NA	NA	NA	NA	NA
WP_019247905.1|1649019_1649319_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930492.1|1649633_1650257_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_010930493.1|1650500_1651370_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010930494.1|1651347_1652292_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247909.1|1652377_1653304_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247910.1|1653416_1654196_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930497.1|1654186_1655383_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010930498.1|1655413_1656364_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_010930499.1|1656585_1657275_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930500.1|1657339_1658095_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930501.1|1658146_1659139_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930502.1|1659148_1660102_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811538.1|1660217_1661180_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019249376.1|1662581_1663010_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1663006_1663957_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_170954298.1|1664250_1664988_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_010930504.1|1665411_1666599_-	MFS transporter	NA	NA	NA	NA	NA
WP_019249653.1|1666602_1666983_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930506.1|1668702_1669674_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930507.1|1669687_1670401_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930508.1|1670405_1671323_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811452.1|1671429_1671726_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929588.1|1671824_1672775_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
NZ_CP012131	Bordetella pertussis strain I150 chromosome, complete genome	4107430	1830542	1889812	4107430	transposase,tRNA,protease	Klosneuvirus(40.0%)	51	NA	NA
WP_005013747.1|1830542_1831493_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930573.1|1831617_1832427_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929577.1|1832627_1833578_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930574.1|1834851_1836069_+	four-carbon acid sugar kinase family protein	NA	NA	NA	NA	NA
WP_003818670.1|1837125_1838028_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930576.1|1838104_1838977_+	MOSC N-terminal beta barrel domain-containing protein	NA	NA	NA	NA	NA
WP_003818672.1|1839107_1839476_+	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
WP_010930577.1|1839533_1840580_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
WP_010930578.1|1840775_1842032_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_003810623.1|1842036_1843374_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_003818676.1|1843523_1844480_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247555.1|1844582_1845515_-	acyclic terpene utilization AtuA family protein	NA	NA	NA	NA	NA
WP_019247554.1|1845630_1845951_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247553.1|1845943_1846303_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930581.1|1846350_1847925_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810637.1|1847977_1848922_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930582.1|1848939_1849770_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930583.1|1849762_1851397_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	8.2e-18
WP_010930584.1|1851393_1852749_+	amidase	NA	NA	NA	NA	NA
WP_010930585.1|1853655_1855233_+	lipoprotein	NA	NA	NA	NA	NA
WP_010930586.1|1855236_1856511_+	type 4b pilus protein PilO2	NA	NA	NA	NA	NA
WP_010930587.1|1856608_1856983_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930588.1|1858698_1859832_+	general secretion pathway protein	NA	NA	NA	NA	NA
WP_003810661.1|1859869_1860475_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_010930589.1|1860471_1861290_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930590.1|1861361_1863986_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
WP_004568544.1|1863972_1864227_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_010930591.1|1864293_1864875_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926757.1|1865178_1865439_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_014905757.1|1865604_1866228_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_003816734.1|1866227_1867001_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_010930593.1|1866997_1868206_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_010930594.1|1868231_1868705_-	RidA family protein	NA	NA	NA	NA	NA
WP_010930048.1|1868778_1869729_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879566.1|1869827_1870778_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930796.1|1870876_1872226_-	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_023852900.1|1872991_1873747_+	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_010930794.1|1873839_1876722_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
WP_003810689.1|1877044_1877470_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
WP_004568542.1|1877497_1878646_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_003810693.1|1878642_1879149_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930793.1|1879155_1880451_+	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_023995843.1|1880509_1881796_+|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930791.1|1881797_1882436_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_003810701.1|1882438_1883599_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_003810703.1|1883625_1884981_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_010930790.1|1884984_1886055_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810707.1|1886193_1886430_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930789.1|1886517_1887624_+	GTPase HflX	NA	NA	NA	NA	NA
WP_010930788.1|1887589_1888894_+|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930787.1|1888912_1889812_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
>prophage 19
NZ_CP012131	Bordetella pertussis strain I150 chromosome, complete genome	4107430	1900052	1944375	4107430	transposase	Staphylococcus_phage(25.0%)	45	NA	NA
WP_005013747.1|1900052_1901003_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|1901101_1902052_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930782.1|1902251_1903337_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_003810400.1|1903352_1904114_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_170954295.1|1904110_1905070_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.6	1.7e-23
WP_010930780.1|1905132_1905633_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930779.1|1905665_1906409_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_010930778.1|1906504_1906744_-	membrane protein	NA	NA	NA	NA	NA
WP_010930777.1|1906757_1906910_-	lipoprotein	NA	NA	NA	NA	NA
WP_010930776.1|1906995_1908486_-	cytochrome c oxidase accessory protein CcoG	NA	NA	NA	NA	NA
WP_010930775.1|1908577_1909516_-	cytochrome-c oxidase, cbb3-type subunit III	NA	NA	NA	NA	NA
WP_003818560.1|1909512_1909689_-	cytochrome oxidase	NA	NA	NA	NA	NA
WP_003810383.1|1909691_1910354_-	cytochrome-c oxidase, cbb3-type subunit II	NA	NA	NA	NA	NA
WP_003810379.1|1911975_1912119_-	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA	NA
WP_010930774.1|1912115_1913090_-	membrane protein	NA	NA	NA	NA	NA
WP_162268682.1|1912984_1913239_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1913256_1914207_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930773.1|1914203_1915478_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_010930772.1|1915581_1916775_+	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930771.1|1916771_1917425_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930770.1|1917421_1918858_+	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930769.1|1918845_1919205_+	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_162268681.1|1920019_1920160_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1920177_1921128_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930768.1|1922173_1924039_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930767.1|1924296_1925817_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_003816959.1|1925904_1926555_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930766.1|1927503_1928799_+	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_010930765.1|1928820_1929705_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930764.1|1929803_1930679_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_003816964.1|1930668_1931025_-	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
WP_010930763.1|1931155_1932130_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003812228.1|1932259_1932439_-	DUF3008 family protein	NA	NA	NA	NA	NA
WP_029443822.1|1932536_1933061_+	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_010930761.1|1933071_1933908_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816971.1|1934020_1934392_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930760.1|1934388_1934940_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_003816975.1|1934955_1936647_-	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
WP_003816977.1|1936695_1937376_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014905663.1|1937623_1938088_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930758.1|1938257_1939187_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_019247659.1|1939199_1939847_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023997035.1|1939920_1941738_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
WP_005012067.1|1941821_1942772_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|1943424_1944375_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NZ_CP012131	Bordetella pertussis strain I150 chromosome, complete genome	4107430	1974148	2038517	4107430	transposase	Vibrio_phage(20.0%)	51	NA	NA
WP_005013747.1|1974148_1975099_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005015810.1|1975320_1976271_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852887.1|1976369_1977335_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930740.1|1977472_1978372_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930739.1|1980966_1982454_+	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_014486081.1|1982464_1983661_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_003816680.1|1983733_1985053_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010930737.1|1985049_1985925_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930736.1|1985955_1987104_-	CoA transferase	NA	NA	NA	NA	NA
WP_010930735.1|1987121_1987436_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_062810228.1|1987457_1988180_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003816690.1|1988179_1988998_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003816691.1|1989002_1989530_-	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_010930733.1|1989535_1990792_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_010930732.1|1991150_1992290_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930731.1|1992367_1993240_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930730.1|1994110_1995061_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930729.1|1995020_1995656_-	membrane protein	NA	NA	NA	NA	NA
WP_010930728.1|1996015_1997338_-	isocitrate lyase	NA	NA	NA	NA	NA
WP_010930727.1|1997656_1998478_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	4.1e-42
WP_003810356.1|1999902_2000475_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930726.1|2000514_2002344_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_010930725.1|2002306_2003365_-	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_010930724.1|2003402_2003864_-	holo-ACP synthase	NA	NA	NA	NA	NA
WP_003810344.1|2003948_2004695_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_019247651.1|2006185_2009416_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_019248531.1|2009482_2010814_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_010930721.1|2011066_2011441_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930720.1|2011543_2012722_-	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_003810329.1|2012732_2013323_-	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_003818535.1|2013433_2014240_+	TOBE domain-containing protein	NA	NA	NA	NA	NA
WP_010930719.1|2014265_2015060_-	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.7	5.1e-05
WP_010930718.1|2016060_2017035_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003818533.1|2017193_2017706_-	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	52.3	1.8e-43
WP_003818532.1|2017862_2018834_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930717.1|2020578_2021385_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010930716.1|2021381_2022683_-	malonyl-CoA decarboxylase family protein	NA	NA	NA	NA	NA
WP_010930715.1|2022633_2023398_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930714.1|2023511_2024282_-	spermidine synthase	NA	NA	NA	NA	NA
WP_010930713.1|2024366_2025554_-	acetyl-CoA C-acyltransferase family protein	NA	NA	NA	NA	NA
WP_003818524.1|2025626_2026001_-	tautomerase family protein	NA	NA	NA	NA	NA
WP_003810308.1|2026101_2027364_-	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.8e-28
WP_003810306.1|2027360_2028218_-	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA	NA
WP_003818523.1|2028390_2029392_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|2029843_2030794_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930712.1|2032309_2033509_+	multidrug effflux MFS transporter	NA	NA	NA	NA	NA
WP_003810297.1|2033877_2034114_+	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_010930711.1|2034177_2034345_+	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_010930710.1|2034458_2036264_-	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.5	2.2e-19
WP_062826579.1|2036517_2037468_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931070.1|2037566_2038517_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
NZ_CP012131	Bordetella pertussis strain I150 chromosome, complete genome	4107430	2170046	2219699	4107430	transposase,tRNA	Synechococcus_phage(15.38%)	43	NA	NA
WP_005012067.1|2170046_2170997_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879626.1|2171095_2173090_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.3	4.4e-21
WP_010930543.1|2173149_2174115_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_010930542.1|2174104_2176966_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
WP_010930541.1|2176968_2177475_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_010930540.1|2177579_2178788_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	30.0	3.8e-36
WP_033446178.1|2178789_2179728_-	membrane protein	NA	NA	NA	NA	NA
WP_010930538.1|2179889_2180363_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|2180359_2181310_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566334.1|2181420_2181861_-	DUF937 domain-containing protein	NA	NA	NA	NA	NA
WP_010930537.1|2181989_2183219_-	lytic murein transglycosylase	NA	NA	NA	NA	NA
WP_004566336.1|2183257_2184079_-	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_029443743.1|2184132_2185284_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930535.1|2185375_2185864_-	DUF1854 domain-containing protein	NA	NA	NA	NA	NA
WP_019247811.1|2188414_2190964_+	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_010930533.1|2191034_2193608_+	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_003813568.1|2193873_2194074_+	CsbD family protein	NA	NA	NA	NA	NA
WP_003813570.1|2194105_2194267_+	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
WP_003813572.1|2194324_2194663_+	BON domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|2194811_2195762_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247882.1|2196536_2197205_+	arylesterase	NA	NA	NA	NA	NA
WP_019247881.1|2197186_2199202_-	SurA N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_004568486.1|2199384_2200134_+	glycerophosphodiester phosphodiesterase	NA	A0A2H4PGQ5	Escherichia_phage	27.8	1.5e-14
WP_003816518.1|2200146_2201010_+	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
WP_003816520.1|2201013_2202429_-	dihydrolipoyl dehydrogenase	NA	NA	NA	NA	NA
WP_010930530.1|2202562_2203291_-	redoxin family protein	NA	A0A1D8KSL1	Synechococcus_phage	56.8	9.6e-43
WP_003811035.1|2203429_2203630_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_003816523.1|2203805_2204204_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003816525.1|2204227_2205628_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	26.5	7.3e-31
WP_010930529.1|2205746_2206499_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930528.1|2206787_2207387_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248494.1|2207491_2208271_-	3'-5' exonuclease	NA	NA	NA	NA	NA
WP_003811022.1|2208267_2209152_-	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A292GJG6	Xanthomonas_phage	49.5	4.6e-15
WP_019247478.1|2209169_2209949_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.9	4.8e-32
WP_010930526.1|2209933_2210692_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.2	1.4e-68
WP_003811015.1|2210817_2211465_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_010929632.1|2211732_2212749_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930524.1|2212846_2213887_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	51.3	6.1e-91
WP_003811011.1|2214021_2215314_+	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	36.0	1.7e-66
WP_003811007.1|2216673_2217057_+	thioredoxin family protein	NA	V9SJ74	Achromobacter_phage	25.8	8.1e-09
WP_010930523.1|2217074_2217662_-	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	35.8	4.7e-16
WP_005012067.1|2217699_2218650_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930048.1|2218748_2219699_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
NZ_CP012131	Bordetella pertussis strain I150 chromosome, complete genome	4107430	2476006	2534250	4107430	transposase,tRNA	Planktothrix_phage(28.57%)	54	NA	NA
WP_005012067.1|2476006_2476957_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930388.1|2477436_2478093_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA	NA
WP_010930387.1|2478107_2479775_-	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_010930386.1|2479777_2480407_-	TRAP transporter small permease subunit	NA	NA	NA	NA	NA
WP_014486072.1|2480618_2481713_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930384.1|2481857_2482670_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_023853502.1|2482673_2484377_-	FimV N-terminal domain protein	NA	NA	NA	NA	NA
WP_010930382.1|2484427_2485558_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930381.1|2485744_2486821_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_010930380.1|2486902_2487553_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_010930379.1|2487567_2488971_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
WP_004567445.1|2489254_2490073_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930378.1|2490069_2490774_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.0	2.6e-13
WP_010930377.1|2491673_2492789_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_004567447.1|2492822_2493197_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930376.1|2493219_2494377_-	formate dehydrogenase subunit gamma	NA	NA	NA	NA	NA
WP_003812666.1|2494389_2494623_-	lipoprotein	NA	NA	NA	NA	NA
WP_019247523.1|2495257_2498227_-	formate dehydrogenase subunit alpha	NA	NA	NA	NA	NA
WP_023853518.1|2498241_2498451_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248667.1|2498602_2499232_-	molecular chaperone TorD family protein	NA	NA	NA	NA	NA
WP_010930373.1|2499228_2501319_-	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_010930372.1|2501342_2502023_-	DUF3306 domain-containing protein	NA	NA	NA	NA	NA
WP_003820494.1|2502019_2502580_-	DUF3305 domain-containing protein	NA	NA	NA	NA	NA
WP_004567450.1|2502586_2503684_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010930371.1|2503836_2504430_+	molybdenum cofactor guanylyltransferase MobA	NA	NA	NA	NA	NA
WP_010930370.1|2504426_2505719_+	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_003812685.1|2505732_2506275_+	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA	NA
WP_010930369.1|2506284_2507121_-	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003820487.1|2507154_2508216_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	42.8	2.9e-80
WP_019247210.1|2508257_2509310_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_019247209.1|2509325_2509628_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|2509769_2510720_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268680.1|2510737_2510902_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930368.1|2510898_2512593_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003809599.1|2512589_2513675_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	6.4e-27
WP_010930367.1|2513722_2514622_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003809593.1|2514632_2515277_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_010930366.1|2516298_2519541_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_023852833.1|2519551_2520706_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.4	3.3e-53
WP_010930364.1|2520932_2521895_+	transaldolase	NA	H6WFR1	Cyanophage	29.2	7.5e-11
WP_076879624.1|2521993_2522944_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930363.1|2523042_2523993_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930362.1|2524002_2524692_-	VIT family protein	NA	NA	NA	NA	NA
WP_003811741.1|2524751_2525189_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003811743.1|2525234_2526128_-	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003811746.1|2526175_2527348_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003811748.1|2527344_2528499_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003811750.1|2528695_2529046_-	RnfH family protein	NA	NA	NA	NA	NA
WP_003811752.1|2529035_2529470_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_010930800.1|2529486_2530437_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811754.1|2530584_2531052_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
WP_010930360.1|2531032_2532190_-	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
WP_003811759.1|2532255_2533182_-	paraslipin	NA	NA	NA	NA	NA
WP_005012067.1|2533299_2534250_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NZ_CP012131	Bordetella pertussis strain I150 chromosome, complete genome	4107430	2576528	2643028	4107430	transposase	uncultured_Caudovirales_phage(40.0%)	56	NA	NA
WP_005012067.1|2576528_2577479_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811850.1|2577848_2578421_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA	NA
WP_003811852.1|2578423_2579434_+	flagellar motor switch protein FliM	NA	NA	NA	NA	NA
WP_010930335.1|2579426_2579927_+	flagellar motor switch protein FliN	NA	NA	NA	NA	NA
WP_003811855.1|2579937_2580279_+	flagellar biosynthetic protein FliO	NA	NA	NA	NA	NA
WP_015041547.1|2580290_2581082_+	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA	NA
WP_003811859.1|2581098_2581368_+	flagellar biosynthesis protein FliQ	NA	NA	NA	NA	NA
WP_010930333.1|2581390_2582179_+	flagellar biosynthetic protein FliR	NA	NA	NA	NA	NA
WP_010929632.1|2582225_2583242_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_014486070.1|2583458_2584901_-	PAS domain-containing protein	NA	A0A1B0V854	Salmonella_phage	41.8	1.0e-35
WP_010930332.1|2585079_2586699_-	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	45.3	1.5e-08
WP_010930331.1|2586819_2588640_-	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	52.6	6.4e-11
WP_010930330.1|2588718_2590251_-	flagellar hook-associated protein FlgL	NA	NA	NA	NA	NA
WP_010930329.1|2590284_2591931_-	flagellar hook-associated protein FlgK	NA	NA	NA	NA	NA
WP_010930328.1|2592000_2593023_-	flagellar assembly peptidoglycan hydrolase FlgJ	NA	A0A088F6W1	Sulfitobacter_phage	31.4	1.9e-12
WP_010930327.1|2593040_2594174_-	flagellar basal body P-ring protein FlgI	NA	NA	NA	NA	NA
WP_010930326.1|2594176_2594866_-	flagellar basal body L-ring protein FlgH	NA	NA	NA	NA	NA
WP_010930325.1|2594865_2595651_-	flagellar basal-body rod protein FlgG	NA	NA	NA	NA	NA
WP_003817181.1|2595694_2596459_-	flagellar basal body rod protein FlgF	NA	NA	NA	NA	NA
WP_003817180.1|2596497_2597919_-	flagellar hook-basal body complex protein	NA	NA	NA	NA	NA
WP_010930324.1|2597984_2598689_-	flagellar basal body rod modification protein FlgD	NA	NA	NA	NA	NA
WP_003817176.1|2598736_2599156_-	flagellar basal body rod protein FlgC	NA	NA	NA	NA	NA
WP_010930323.1|2599168_2599576_-	flagellar basal body rod protein FlgB	NA	NA	NA	NA	NA
WP_010930322.1|2599759_2600470_+	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA	NA
WP_003817172.1|2600596_2600887_+	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA	NA
WP_003817170.1|2600904_2601387_+	flagellar protein FlgN	NA	NA	NA	NA	NA
WP_010930321.1|2605892_2607047_-	flagellar type III secretion system protein FlhB	NA	NA	NA	NA	NA
WP_010931363.1|2607352_2608369_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930319.1|2608615_2609404_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003812020.1|2609470_2610151_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812022.1|2610147_2610918_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.1	9.8e-30
WP_010930208.1|2611016_2611967_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811401.1|2612022_2612940_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
WP_003811400.1|2612950_2614129_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	NA	NA	NA	NA
WP_010930318.1|2614148_2615144_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811396.1|2616732_2617341_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_003811393.1|2617328_2618369_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_003811391.1|2618386_2619349_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811389.1|2619345_2620539_-	CoA transferase	NA	NA	NA	NA	NA
WP_010930317.1|2620535_2621333_-	citryl-CoA lyase	NA	NA	NA	NA	NA
WP_014486069.1|2621358_2622345_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930316.1|2622363_2624403_-	acetate--CoA ligase family protein	NA	NA	NA	NA	NA
WP_010930315.1|2624604_2625285_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930314.1|2625298_2626210_-	CoA ester lyase	NA	NA	NA	NA	NA
WP_003811381.1|2626206_2626785_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930313.1|2626923_2627829_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930312.1|2627836_2631256_+	TM0106 family RecB-like putative nuclease	NA	NA	NA	NA	NA
WP_010930311.1|2631243_2633844_-	BP1344/BB2830 family autotransporter	NA	NA	NA	NA	NA
WP_003811375.1|2634799_2635432_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003811372.1|2635825_2636584_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_003811370.1|2636580_2637783_+	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010930208.1|2637970_2638921_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930310.1|2639828_2640974_+	DUF3182 family protein	NA	NA	NA	NA	NA
WP_019247449.1|2640960_2641716_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_003811361.1|2641832_2642012_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930208.1|2642077_2643028_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
NZ_CP012131	Bordetella pertussis strain I150 chromosome, complete genome	4107430	2671143	2708555	4107430	transposase	Planktothrix_phage(33.33%)	39	NA	NA
WP_005012067.1|2671143_2672094_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2672192_2673143_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811316.1|2673235_2673775_+	peroxiredoxin	NA	NA	NA	NA	NA
WP_023852799.1|2673881_2674226_-	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	58.4	3.0e-31
WP_010930298.1|2674283_2675732_-	CoA transferase	NA	NA	NA	NA	NA
WP_003811313.1|2675919_2676255_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_010930297.1|2677882_2679061_+	DUF1501 domain-containing protein	NA	NA	NA	NA	NA
WP_003811310.1|2679143_2679644_+	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	38.4	4.7e-25
WP_010930296.1|2679753_2680455_+	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010930295.1|2680466_2680931_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_023852802.1|2680945_2681221_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003811306.1|2681217_2681994_+	lipoate--protein ligase family protein	NA	NA	NA	NA	NA
WP_010930294.1|2682022_2682850_+	DUF3298 domain-containing protein	NA	NA	NA	NA	NA
WP_010930293.1|2682975_2683446_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003811301.1|2683572_2684466_+	phosphatidylserine decarboxylase	NA	NA	NA	NA	NA
WP_010930292.1|2684513_2685695_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_003811298.1|2685707_2686523_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930291.1|2686656_2687184_-	RES family NAD+ phosphorylase	NA	NA	NA	NA	NA
WP_003811295.1|2687180_2687678_-	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
WP_003811293.1|2687825_2688203_+	DUF423 domain-containing protein	NA	NA	NA	NA	NA
WP_010929584.1|2688424_2689375_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811244.1|2689473_2690085_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930290.1|2690319_2691447_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930289.1|2691557_2692646_-	sn-glycerol-3-phosphate import ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	31.2	2.2e-19
WP_003811259.1|2692698_2693550_-	sn-glycerol-3-phosphate ABC transporter permease UgpE	NA	NA	NA	NA	NA
WP_003811262.1|2693569_2694451_-	sn-glycerol-3-phosphate ABC transporter permease UgpA	NA	NA	NA	NA	NA
WP_010930288.1|2694627_2695941_-	sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA	NA	NA	NA	NA
WP_003811267.1|2696151_2696985_+	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
WP_010930287.1|2696981_2697563_+	queuosine precursor transporter	NA	A0A2I7SAW6	Vibrio_phage	37.3	9.4e-17
WP_005015810.1|2697916_2698867_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930286.1|2698882_2699998_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003811272.1|2700100_2701027_+	high-affinity branched-chain amino acid ABC transporter permease LivH	NA	NA	NA	NA	NA
WP_010930285.1|2701026_2702265_+	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA	NA
WP_003811277.1|2702261_2703029_+	high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG	NA	A0A2H4PQG7	Staphylococcus_phage	26.4	1.2e-14
WP_010930284.1|2703029_2703731_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.4	1.3e-17
WP_019247793.1|2703812_2704259_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_010930283.1|2705148_2705787_+	glutathione S-transferase	NA	NA	NA	NA	NA
WP_005012808.1|2706555_2707506_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012808.1|2707604_2708555_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 25
NZ_CP012131	Bordetella pertussis strain I150 chromosome, complete genome	4107430	2807682	2928059	4107430	transposase,protease	Agrobacterium_phage(16.67%)	97	NA	NA
WP_023853639.1|2807682_2808633_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879566.1|2808731_2809682_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931071.1|2810010_2810616_+	fimbrial major subunit FimX	NA	NA	NA	NA	NA
WP_010931072.1|2810669_2811983_-	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
WP_003813284.1|2812057_2812528_-	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA	NA
WP_010931073.1|2812527_2813316_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
WP_010931074.1|2813326_2814979_-	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA	NA
WP_010929591.1|2815066_2816017_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931075.1|2817178_2817685_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA	NA
WP_003813293.1|2817681_2818446_-	phenylacetate-CoA oxygenase subunit PaaC	NA	NA	NA	NA	NA
WP_010931076.1|2818461_2818746_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA	NA
WP_003813298.1|2818810_2819800_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
WP_010931077.1|2819971_2820901_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA	NA
WP_003813302.1|2820872_2821559_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
WP_003813303.1|2821592_2822138_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	37.7	2.1e-26
WP_003813306.1|2822182_2823448_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003813309.1|2823444_2824347_+	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA	NA
WP_019247679.1|2825528_2826473_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931079.1|2826567_2828085_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931080.1|2828126_2829755_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_003811986.1|2829862_2830744_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931081.1|2833856_2834231_+	endonuclease	NA	F4YXR7	Roseobacter_phage	54.4	2.1e-25
WP_003812004.1|2834255_2834594_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931082.1|2834637_2836272_-	NAD+ synthase	NA	A0A2L0UZF5	Agrobacterium_phage	36.6	8.3e-87
WP_010931083.1|2836310_2837657_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_003812010.1|2837764_2839186_+	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_010931084.1|2839255_2839840_-	nitroreductase	NA	NA	NA	NA	NA
WP_005012067.1|2839942_2840893_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931085.1|2841027_2842134_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010931086.1|2842144_2843242_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
WP_010931087.1|2843386_2844592_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_010931088.1|2844598_2845120_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA	NA
WP_010931089.1|2845116_2845608_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
WP_003819740.1|2845604_2845856_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
WP_003819741.1|2845836_2846322_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
WP_010931090.1|2846457_2849919_+	DUF748 domain-containing protein	NA	NA	NA	NA	NA
WP_010931091.1|2849936_2850821_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
WP_010931092.1|2850830_2851262_-	lipoprotein	NA	NA	NA	NA	NA
WP_003809348.1|2851508_2852012_+	peroxiredoxin	NA	M1I839	Pelagibacter_phage	44.1	1.8e-24
WP_010931094.1|2852089_2853490_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931095.1|2853564_2854440_-	membrane protein	NA	NA	NA	NA	NA
WP_023853546.1|2854436_2855444_-	biotin synthase BioB	NA	NA	NA	NA	NA
WP_010931097.1|2855911_2856217_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003819753.1|2856307_2856898_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930525.1|2857088_2858105_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010931098.1|2858296_2860633_-	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.8	3.2e-124
WP_003812014.1|2860715_2861150_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_023995489.1|2861248_2862199_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2862297_2863248_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931099.1|2863244_2864039_-	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_010931100.1|2864070_2864775_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931101.1|2864849_2865650_-	SURF1 family protein	NA	NA	NA	NA	NA
WP_003809276.1|2865646_2866054_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_003819722.1|2866050_2866692_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_010931102.1|2866684_2868685_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_010931103.1|2869945_2871277_+	MFS transporter	NA	NA	NA	NA	NA
WP_005012067.1|2871273_2872224_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931105.1|2873930_2874197_-	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_003812839.1|2874904_2875243_+	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931107.1|2879796_2880399_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931108.1|2880495_2881785_+	MFS transporter	NA	NA	NA	NA	NA
WP_003812846.1|2881842_2882574_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931109.1|2882570_2883374_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812851.1|2883370_2884459_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|2884455_2885385_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812857.1|2885533_2886679_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930800.1|2886700_2887651_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154698391.1|2887668_2887827_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931110.1|2887981_2891803_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010931111.1|2891959_2892628_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_014905522.1|2892632_2894306_-	MCE family protein	NA	NA	NA	NA	NA
WP_003820402.1|2894324_2895644_-	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_010931114.1|2895648_2897964_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.1e-164
WP_010931115.1|2898019_2900188_-	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_010931116.1|2900184_2905374_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_003820400.1|2905463_2905778_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_003812875.1|2906005_2906251_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820399.1|2906345_2906864_+	DUF192 domain-containing protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_010931117.1|2906963_2908169_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_019247560.1|2908284_2909682_-	chloride channel protein	NA	NA	NA	NA	NA
WP_010931119.1|2909798_2910377_-	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_010931120.1|2910449_2911841_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_005012067.1|2912008_2912959_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812889.1|2913239_2913860_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_010931122.1|2913856_2914270_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_010931123.1|2914266_2915310_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_003812895.1|2915365_2915554_+	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931124.1|2915563_2916328_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_010931125.1|2916418_2917075_+	adenylate kinase	NA	NA	NA	NA	NA
WP_010931126.1|2917166_2917925_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931127.1|2917950_2919552_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931128.1|2919752_2920757_+	FecR domain-containing protein	NA	NA	NA	NA	NA
WP_003812908.1|2920857_2921121_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931129.1|2921238_2922015_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_005012067.1|2922605_2923556_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931130.1|2925939_2927052_-	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_005012808.1|2927108_2928059_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
NZ_CP012131	Bordetella pertussis strain I150 chromosome, complete genome	4107430	2958445	3002136	4107430	transposase	Planktothrix_phage(33.33%)	41	NA	NA
WP_005012067.1|2958445_2959396_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268686.1|2959413_2959563_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023852715.1|2959516_2960413_-	inositol monophosphatase	NA	NA	NA	NA	NA
WP_003814547.1|2962690_2964916_+	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_003814544.1|2965080_2966169_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_019247918.1|2966125_2966779_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931144.1|2966826_2967624_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930176.1|2968155_2969106_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247277.1|2969180_2970335_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|2970391_2971342_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814535.1|2971440_2971746_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_003820797.1|2971774_2972209_-	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_010931147.1|2972210_2973455_-	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003820799.1|2973451_2974162_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_033446288.1|2974176_2975088_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931149.1|2975450_2975855_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247890.1|2975851_2976310_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_019247891.1|2976316_2977225_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010931150.1|2977221_2978088_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_003814524.1|2978074_2978902_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003820806.1|2978912_2980040_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_023852748.1|2981117_2982356_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931152.1|2982397_2983660_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010931153.1|2983666_2984419_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_019248355.1|2984470_2984656_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003820813.1|2984931_2985396_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_003820814.1|2985427_2986087_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_010931154.1|2986231_2988340_+	AsmA family protein	NA	NA	NA	NA	NA
WP_023852714.1|2988336_2989287_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931155.1|2989390_2990011_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931156.1|2990102_2990855_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019248356.1|2991989_2993114_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247402.1|2993159_2993528_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2993769_2994720_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247492.1|2995755_2996298_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023998107.1|2996495_2996666_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2996683_2997634_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997028.1|2997630_2998596_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815281.1|2998665_2999502_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
WP_010931158.1|3000014_3001124_+	porin	NA	NA	NA	NA	NA
WP_005012067.1|3001185_3002136_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 28
NZ_CP012131	Bordetella pertussis strain I150 chromosome, complete genome	4107430	3382081	3435822	4107430	transposase	Staphylococcus_phage(33.33%)	48	NA	NA
WP_023995489.1|3382081_3383032_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931336.1|3383436_3384081_-	urease accessory protein UreG	NA	NA	NA	NA	NA
WP_019247677.1|3384105_3384690_-	urease accessory protein UreF	NA	NA	NA	NA	NA
WP_014905506.1|3384790_3385408_-	urease accessory protein UreE	NA	NA	NA	NA	NA
WP_010931337.1|3385410_3387126_-	urease subunit alpha	NA	NA	NA	NA	NA
WP_010931338.1|3387122_3387431_-	urease subunit beta	NA	NA	NA	NA	NA
WP_003814828.1|3387447_3388065_-	HupE/UreJ family protein	NA	NA	NA	NA	NA
WP_010931340.1|3388109_3388412_-	urease subunit gamma	NA	NA	NA	NA	NA
WP_003814832.1|3388512_3389367_-	urease accessory protein UreD	NA	NA	NA	NA	NA
WP_124740609.1|3389554_3389779_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929281.1|3389948_3390221_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_010929282.1|3390638_3391046_-	GFA family protein	NA	NA	NA	NA	NA
WP_010931341.1|3391415_3392210_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010927102.1|3392310_3393546_+	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003814852.1|3393614_3394631_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931342.1|3394642_3396019_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003814856.1|3396015_3397212_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814858.1|3397208_3398747_-	SpoVR family protein	NA	NA	NA	NA	NA
WP_010931343.1|3398743_3400003_-	YeaH/YhbH family protein	NA	NA	NA	NA	NA
WP_005012067.1|3401943_3402894_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931344.1|3403660_3404755_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247312.1|3404747_3406082_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_003808193.1|3406035_3406719_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_024000003.1|3406744_3407908_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_004566224.1|3407904_3408906_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931346.1|3408905_3409778_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931347.1|3409774_3410524_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931348.1|3410520_3411312_-	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931349.1|3411308_3412448_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_047122778.1|3412723_3413509_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486103.1|3413542_3414325_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_010931351.1|3414328_3414718_+	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_010931352.1|3415857_3416721_+	MaoC family dehydratase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010931353.1|3416756_3417845_+	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_010931070.1|3417841_3418792_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247959.1|3419145_3422124_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003818344.1|3423050_3423929_+	fatty acid desaturase	NA	NA	NA	NA	NA
WP_005013747.1|3425877_3426828_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931354.1|3426824_3427292_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_010931355.1|3427334_3428105_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_077069987.1|3428125_3428926_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931356.1|3428936_3430346_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_003814739.1|3430440_3431226_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931561.1|3431465_3432482_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814742.1|3432589_3432982_-	OsmC family protein	NA	NA	NA	NA	NA
WP_010931357.1|3433119_3433800_+	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_023994844.1|3433804_3434776_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930179.1|3434871_3435822_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 29
NZ_CP012131	Bordetella pertussis strain I150 chromosome, complete genome	4107430	3441977	3501275	4107430	transposase,tRNA	Acinetobacter_phage(27.27%)	48	NA	NA
WP_003820957.1|3441977_3443741_+|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
WP_010931362.1|3443852_3444731_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003814250.1|3444843_3445659_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_003814252.1|3445662_3445914_+	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_010929632.1|3445998_3447015_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814254.1|3447345_3447567_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_019247693.1|3449927_3450845_-	DMT family transporter	NA	NA	NA	NA	NA
WP_019247692.1|3451342_3452551_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931365.1|3452630_3454202_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814275.1|3454319_3455255_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_003814277.1|3455443_3456388_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
WP_003814283.1|3456955_3462673_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
WP_010931367.1|3462678_3463806_+	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
WP_003814287.1|3463861_3464488_+	aminotransferase class IV	NA	NA	NA	NA	NA
WP_010931363.1|3464759_3465776_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010927020.1|3465871_3466582_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931368.1|3466578_3467568_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931369.1|3467663_3469295_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931370.1|3469297_3470035_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247745.1|3470190_3471063_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_003814298.1|3471331_3472552_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814300.1|3472548_3473208_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_003814302.1|3473279_3473912_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_010931372.1|3473941_3474460_+	flavin reductase family protein	NA	NA	NA	NA	NA
WP_010931373.1|3474470_3475580_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003814312.1|3475626_3476481_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931374.1|3476482_3477385_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3478607_3479558_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997720.1|3481312_3482302_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247413.1|3482298_3482457_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931375.1|3482477_3483266_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_003817833.1|3483262_3484294_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_003815390.1|3484312_3484876_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_010931376.1|3484931_3486452_-	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_010931377.1|3486715_3487420_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_003815384.1|3487427_3488165_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_003815381.1|3488270_3488645_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003815379.1|3488687_3489977_+	murein transglycosylase A	NA	NA	NA	NA	NA
WP_010931378.1|3489973_3491143_+	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_010931379.1|3491139_3491979_+	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931380.1|3492038_3492974_+	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_010929591.1|3492986_3493937_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931381.1|3494035_3494998_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_003817821.1|3495029_3495389_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931382.1|3495513_3496416_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_010931383.1|3496417_3498190_-	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_003815367.1|3498224_3499001_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_023852617.1|3500324_3501275_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 30
NZ_CP012131	Bordetella pertussis strain I150 chromosome, complete genome	4107430	3516213	3574286	4107430	transposase,tRNA	Planktothrix_phage(12.5%)	47	NA	NA
WP_005012808.1|3516213_3517164_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931392.1|3517292_3518426_-	M20 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931393.1|3518469_3519375_-	hydrolase	NA	NA	NA	NA	NA
WP_023852622.1|3519377_3521078_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	1.0e-15
WP_010931394.1|3521074_3521995_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003817805.1|3522002_3522980_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931395.1|3523038_3524073_-	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA	NA
WP_003815317.1|3526047_3526284_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023995266.1|3526410_3527274_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_003815315.1|3527362_3528184_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003815313.1|3528263_3529001_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931397.1|3528997_3529990_-	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_003817794.1|3530103_3530766_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931399.1|3530810_3531959_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010931400.1|3534282_3535233_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486105.1|3535573_3536524_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|3536622_3537573_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443756.1|3537869_3538367_+	cupredoxin family protein	NA	NA	NA	NA	NA
WP_010931403.1|3538409_3540185_+	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
WP_010931404.1|3540192_3541059_+	copper resistance protein B	NA	NA	NA	NA	NA
WP_019249391.1|3541065_3541800_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931406.1|3542969_3543764_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815296.1|3544053_3544644_+	cysteine dioxygenase	NA	NA	NA	NA	NA
WP_010931407.1|3544677_3546006_-	amidase	NA	NA	NA	NA	NA
WP_010931408.1|3546080_3547226_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014905478.1|3547337_3548336_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446233.1|3548298_3548733_+	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
WP_010929974.1|3550249_3551134_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929973.1|3551130_3552336_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010929972.1|3552332_3553193_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_003807038.1|3553305_3555096_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
WP_003807035.1|3555136_3555802_-	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	6.7e-11
WP_010929971.1|3555802_3556111_-	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929970.1|3556276_3557563_-	putative Na+/H+ antiporter	NA	NA	NA	NA	NA
WP_010929969.1|3558996_3559947_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929968.1|3561898_3563113_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_003815171.1|3563218_3564208_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
WP_003815172.1|3564204_3564813_+	HAD-IIIA family hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
WP_010929967.1|3564825_3565455_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_003815175.1|3565451_3566072_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_003815177.1|3566103_3566895_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
WP_010929966.1|3567746_3568202_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_010929965.1|3568220_3569147_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_010929964.1|3569200_3570487_-	cytochrome c	NA	NA	NA	NA	NA
WP_003815183.1|3571417_3572290_+	RNase adapter RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
WP_010929963.1|3572286_3573237_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
WP_005012067.1|3573335_3574286_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 32
NZ_CP012131	Bordetella pertussis strain I150 chromosome, complete genome	4107430	4029601	4083033	4107430	transposase	Planktothrix_phage(40.0%)	46	NA	NA
WP_010931661.1|4029601_4030552_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931662.1|4030721_4031948_+	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA	NA	NA	NA	NA
WP_010931663.1|4032147_4033014_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_003815027.1|4033006_4033969_+	Nudix family hydrolase	NA	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	53.4	1.9e-06
WP_010927663.1|4034069_4035020_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|4035118_4036069_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|4036167_4037118_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994937.1|4037114_4038608_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_003815032.1|4038604_4041712_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931665.1|4041708_4044777_-	MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931666.1|4044773_4046024_-	MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_003815038.1|4046204_4046966_-	cell division protein ZapD	NA	NA	NA	NA	NA
WP_019247320.1|4046998_4047649_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_003820519.1|4047651_4048491_-	prepilin peptidase	NA	NA	NA	NA	NA
WP_003815047.1|4048731_4049475_+	copper resistance protein NlpE N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_003815049.1|4049557_4049905_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003815051.1|4050002_4050845_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_003815053.1|4050889_4051777_-	segregation/condensation protein A	NA	NA	NA	NA	NA
WP_003815055.1|4051803_4051992_-	DUF3460 family protein	NA	NA	NA	NA	NA
WP_010931669.1|4052089_4053547_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_010931670.1|4053533_4055060_+	glycerol kinase GlpK	NA	NA	NA	NA	NA
WP_003815061.1|4055078_4055546_-	CopD family protein	NA	NA	NA	NA	NA
WP_010931671.1|4055545_4056568_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_169507388.1|4056688_4057408_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.9	4.7e-34
WP_003815066.1|4057483_4058584_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815068.1|4058585_4059776_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815070.1|4059895_4060912_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	42.1	1.0e-71
WP_003815073.1|4061230_4061902_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	38.2	9.5e-29
WP_010927126.1|4061898_4062807_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_010931672.1|4063018_4063666_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA	NA
WP_010931673.1|4067517_4068594_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
WP_003815084.1|4068604_4069414_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_023999981.1|4069503_4070277_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_023853189.1|4070277_4070442_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930363.1|4070459_4071410_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077274100.1|4071298_4072321_+	CoA transferase	NA	NA	NA	NA	NA
WP_010931674.1|4072310_4073465_+	CoA transferase	NA	NA	NA	NA	NA
WP_010931675.1|4073504_4074917_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_019247370.1|4075041_4075908_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931677.1|4075909_4076734_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_023853488.1|4076730_4077492_+	nitroreductase	NA	M1I6Q5	Acanthocystis_turfacea_Chlorella_virus	31.0	2.0e-19
WP_003808010.1|4077572_4078259_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931679.1|4078432_4079440_+	hydroxymethylglutaryl-CoA lyase	NA	NA	NA	NA	NA
WP_003819309.1|4079436_4080216_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931680.1|4080273_4081536_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929591.1|4082082_4083033_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
