The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP012132	Bordetella pertussis strain I187 chromosome, complete genome	4106507	27282	70036	4106507	transposase,tRNA	Synechococcus_phage(50.0%)	41	NA	NA
WP_010930363.1|27282_28233_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995007.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929578.1|28674_29109_-	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_019247164.1|29141_30359_-	thiolase family protein	NA	NA	NA	NA	NA
WP_010929580.1|30364_30862_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_019247165.1|31069_32005_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929582.1|32214_33006_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929583.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010929584.1|34625_35576_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814398.1|35572_36763_-	MFS transporter	NA	NA	NA	NA	NA
WP_010929585.1|37012_37924_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010929586.1|37925_40064_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003814404.1|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|41318_42212_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247766.1|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|42687_43218_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_010929588.1|43663_44614_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929589.1|45200_45749_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|45720_45957_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|46084_46978_+	AEC family transporter	NA	NA	NA	NA	NA
WP_010929590.1|48147_49395_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|49391_50006_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_010929591.1|50141_51092_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443813.1|51134_52391_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|53622_54357_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|54362_54953_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|54977_55667_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|55663_56425_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|56504_57404_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|57497_58448_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929595.1|59248_60475_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_047122776.1|60474_60888_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929597.1|61077_62019_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248755.1|62442_63417_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929599.1|63473_64055_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010929600.1|64067_64370_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_029443770.1|64488_65547_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_019247832.1|65581_66853_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010929603.1|67482_68664_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929584.1|69085_70036_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP012132	Bordetella pertussis strain I187 chromosome, complete genome	4106507	232666	307010	4106507	transposase	uncultured_Mediterranean_phage(15.38%)	55	NA	NA
WP_010929591.1|232666_233617_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931563.1|233613_234804_-	voltage-gated potassium channel protein	NA	NA	NA	NA	NA
WP_010931562.1|234925_235690_-	phytanoyl-CoA dioxygenase family protein	NA	NA	NA	NA	NA
WP_003807735.1|235776_236880_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_010931561.1|237071_238088_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815102.1|238369_238858_+	D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase	NA	A0A1B1IUK5	uncultured_Mediterranean_phage	34.1	1.6e-17
WP_003817656.1|240201_240882_-	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	34.8	3.5e-15
WP_010931560.1|240943_241795_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_010931559.1|241791_242589_-	thiazole synthase	NA	NA	NA	NA	NA
WP_010931558.1|242692_243586_-	cobalamin-binding protein	NA	NA	NA	NA	NA
WP_010931557.1|243597_245487_-	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	30.8	7.6e-07
WP_010931556.1|245823_249597_+	methionine synthase	NA	A0A140XBC7	Dickeya_phage	50.8	8.6e-10
WP_010929591.1|249593_250544_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268689.1|250561_250738_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929826.1|250852_251545_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	41.6	6.3e-36
WP_003818232.1|251918_252419_-	SET domain-containing protein-lysine N-methyltransferase	NA	NA	NA	NA	NA
WP_023853391.1|252525_253446_+	bestrophin	NA	NA	NA	NA	NA
WP_010929823.1|253462_253939_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929822.1|254032_255883_+	biosynthetic-type acetolactate synthase large subunit	NA	E4WLQ6	Ostreococcus_tauri_virus	30.4	2.2e-59
WP_010929821.1|255938_256697_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929820.1|256724_258158_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003818225.1|258231_259011_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929819.1|259023_259857_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_020699616.1|259865_260636_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.9	8.1e-24
WP_010929818.1|260635_261700_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929817.1|261851_264479_-	DNA topoisomerase III	NA	A0A0G2YA05	Acanthamoeba_polyphaga_mimivirus	25.4	6.1e-23
WP_010929816.1|264542_267164_+	GDYXXLXY domain-containing protein	NA	NA	NA	NA	NA
WP_003815964.1|268091_268550_-	DUF494 domain-containing protein	NA	NA	NA	NA	NA
WP_010929815.1|268828_271072_-	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA	NA
WP_010929814.1|271268_273293_-	TRAP transporter permease	NA	NA	NA	NA	NA
WP_010929813.1|273416_274379_-	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010929812.1|274590_275730_+	DSD1 family PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_010929811.1|275752_276718_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_004565905.1|276913_278104_+	acetylornithine transaminase	NA	A0A1V0SKB7	Klosneuvirus	26.7	4.4e-21
WP_003815955.1|278117_278363_+	DUF1653 domain-containing protein	NA	NA	NA	NA	NA
WP_010929810.1|278391_280413_-	acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha	NA	NA	NA	NA	NA
WP_003815953.1|280459_282067_-	methylcrotonoyl-CoA carboxylase	NA	A0A1B2ITV7	Pike_perch_iridovirus	57.3	5.4e-22
WP_010929808.1|282167_283337_-	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_005012067.1|286218_287169_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929807.1|287192_288251_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_003818201.1|288325_288700_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|289254_290205_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929833.1|291761_292607_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929834.1|292694_293858_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010929835.1|294276_295248_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929836.1|295286_296714_-	amidase	NA	NA	NA	NA	NA
WP_023853625.1|296833_297625_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929838.1|297743_300197_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	34.8	2.3e-112
WP_010929839.1|300291_301401_-	DNA polymerase III subunit beta	NA	B4UTW9	Rhizobium_phage	32.6	1.2e-41
WP_010929554.1|301403_302813_-	chromosomal replication initiator protein DnaA	NA	NA	NA	NA	NA
WP_003816025.1|303218_303353_+	50S ribosomal protein L34	NA	NA	NA	NA	NA
WP_003816026.1|303448_303820_+	ribonuclease P protein component	NA	NA	NA	NA	NA
WP_003816027.1|303816_304089_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	52.2	7.0e-15
WP_010927254.1|304137_305829_+	membrane protein insertase YidC	NA	NA	NA	NA	NA
WP_005012067.1|306059_307010_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP012132	Bordetella pertussis strain I187 chromosome, complete genome	4106507	489373	607268	4106507	transposase,tRNA	Acinetobacter_phage(22.22%)	102	NA	NA
WP_005012067.1|489373_490324_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929956.1|490422_491373_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929957.1|492095_493370_+|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
WP_003807618.1|493456_494539_+	peptide chain release factor 1	NA	A0A0S4KWG0	Pseudomonas_phage	40.7	3.3e-07
WP_010929958.1|494549_495362_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_010929959.1|495398_495725_+	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA	NA
WP_003807624.1|495729_496290_+	UbiX family flavin prenyltransferase	NA	NA	NA	NA	NA
WP_003819054.1|496530_497523_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929960.1|497541_498537_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_023853194.1|498552_499929_+	FAD binding domain-containing protein	NA	A0A0P0IVM8	Acinetobacter_phage	37.3	2.4e-18
WP_010929962.1|499921_502303_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_019247263.1|502319_502709_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_020699695.1|502835_503066_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|503170_504121_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929963.1|504219_505170_-	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
WP_003815183.1|505166_506039_-	RNase adapter RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
WP_010929964.1|506969_508256_+	cytochrome c	NA	NA	NA	NA	NA
WP_010929965.1|508309_509236_-	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_010929966.1|509254_509710_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_003815177.1|510561_511353_-	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
WP_003815175.1|511384_512005_-	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_010929967.1|512001_512631_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_003815172.1|512643_513252_-	HAD-IIIA family hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
WP_003815171.1|513248_514238_-	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
WP_010929968.1|514343_515558_+	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_010929969.1|517509_518460_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929970.1|519893_521180_+	putative Na+/H+ antiporter	NA	NA	NA	NA	NA
WP_010929971.1|521345_521654_+	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
WP_003807035.1|521654_522320_+	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	6.7e-11
WP_003807038.1|522360_524151_+|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
WP_010929972.1|524263_525124_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_010929973.1|525120_526326_+	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010929974.1|526322_527207_-	DMT family transporter	NA	NA	NA	NA	NA
WP_033446233.1|528723_529158_-	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
WP_014905478.1|529120_530119_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931408.1|530230_531376_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931407.1|531450_532779_+	amidase	NA	NA	NA	NA	NA
WP_003815296.1|532812_533403_-	cysteine dioxygenase	NA	NA	NA	NA	NA
WP_010931406.1|533692_534487_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019249391.1|535656_536391_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931404.1|536397_537264_-	copper resistance protein B	NA	NA	NA	NA	NA
WP_010931403.1|537271_539047_-	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
WP_029443756.1|539089_539587_-	cupredoxin family protein	NA	NA	NA	NA	NA
WP_005013747.1|539883_540834_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|540932_541883_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931400.1|542223_543174_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931399.1|545497_546646_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003817794.1|546690_547353_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931397.1|547466_548459_+	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_003815313.1|548455_549193_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003815315.1|549272_550094_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931396.1|550182_551046_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_003815317.1|551172_551409_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931395.1|553383_554418_+	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA	NA
WP_003817805.1|554476_555454_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931394.1|555461_556382_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_023852622.1|556378_558079_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	1.0e-15
WP_010931393.1|558081_558987_+	hydrolase	NA	NA	NA	NA	NA
WP_010931392.1|559030_560164_+	M20 family metallopeptidase	NA	NA	NA	NA	NA
WP_005012808.1|560292_561243_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931391.1|561341_563411_-	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	37.3	2.6e-101
WP_019247688.1|563453_565556_-	primosomal protein N'	NA	NA	NA	NA	NA
WP_010931389.1|565862_566939_-	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
WP_010931388.1|567014_567899_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003815341.1|568081_568504_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA	NA
WP_010931387.1|568513_569914_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA	NA
WP_003817813.1|569956_570862_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA	NA
WP_010931386.1|570960_572502_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA	NA
WP_003815348.1|572536_573076_-	F0F1 ATP synthase subunit delta	NA	NA	NA	NA	NA
WP_010931385.1|573088_573559_-	F0F1 ATP synthase subunit B	NA	NA	NA	NA	NA
WP_003815363.1|573696_573939_-	F0F1 ATP synthase subunit C	NA	NA	NA	NA	NA
WP_003815364.1|574055_574937_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA	NA
WP_003815365.1|575009_575330_-	ATP synthase subunit I	NA	NA	NA	NA	NA
WP_023852617.1|576181_577132_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003815367.1|578455_579232_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931383.1|579266_581039_+	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931382.1|581040_581943_-	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_003817821.1|582067_582427_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931381.1|582458_583421_+|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_005012067.1|583519_584470_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931380.1|584482_585418_-	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_010931379.1|585477_586317_-	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931378.1|586313_587483_-	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_003815379.1|587479_588769_-	murein transglycosylase A	NA	NA	NA	NA	NA
WP_003815381.1|588811_589186_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003815384.1|589291_590029_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_010931377.1|590036_590741_+	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_010931376.1|591004_592525_+	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_003815390.1|592580_593144_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_003817833.1|593162_594194_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_010931375.1|594190_594979_+	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_019247413.1|594999_595158_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023997720.1|595154_596144_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|597900_598851_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931374.1|600073_600976_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814312.1|600977_601832_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931373.1|601878_602988_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931372.1|602998_603517_-	flavin reductase family protein	NA	NA	NA	NA	NA
WP_003814302.1|603546_604179_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_003814300.1|604250_604910_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_003814298.1|604906_606127_-	MFS transporter	NA	NA	NA	NA	NA
WP_019247745.1|606395_607268_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
>prophage 5
NZ_CP012132	Bordetella pertussis strain I187 chromosome, complete genome	4106507	611682	675515	4106507	transposase,tRNA	Pandoravirus(12.5%)	47	NA	NA
WP_010931363.1|611682_612699_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814287.1|612970_613597_-	aminotransferase class IV	NA	NA	NA	NA	NA
WP_010931367.1|613652_614780_-	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
WP_003814283.1|614785_620503_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
WP_003814277.1|621070_622015_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
WP_003814275.1|622203_623139_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_010931365.1|623256_624828_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247692.1|624907_626116_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_019247693.1|626613_627531_+	DMT family transporter	NA	NA	NA	NA	NA
WP_003814254.1|629891_630113_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_010929632.1|630443_631460_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814252.1|631544_631796_-	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_003814250.1|631799_632615_-	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_010931362.1|632727_633606_-	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003820957.1|633717_635481_-|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
WP_010931361.1|635596_636937_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_010927010.1|638006_639431_-	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_003814239.1|639430_640132_-	response regulator	NA	W8CYM9	Bacillus_phage	36.6	5.6e-32
WP_010930179.1|641636_642587_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994844.1|642682_643654_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931357.1|643658_644339_-	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_003814742.1|644476_644869_+	OsmC family protein	NA	NA	NA	NA	NA
WP_010931561.1|644976_645993_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814739.1|646232_647018_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931356.1|647112_648522_-	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_010927090.1|648532_649333_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931355.1|649353_650124_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_010931354.1|650166_650634_+	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_005013747.1|650630_651581_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818344.1|653529_654408_-	fatty acid desaturase	NA	NA	NA	NA	NA
WP_019247959.1|655334_658313_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931070.1|658666_659617_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931353.1|659613_660702_-	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_010931352.1|660737_661601_-	MaoC family dehydratase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010931351.1|662740_663130_-	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_014486103.1|663133_663916_-	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_047122778.1|663949_664735_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931349.1|665010_666150_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931348.1|666146_666938_+	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931347.1|666934_667684_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931346.1|667680_668553_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_004566224.1|668552_669554_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003808195.1|669550_670714_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003808193.1|670739_671423_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247312.1|671376_672711_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931344.1|672703_673798_+	CoA transferase	NA	NA	NA	NA	NA
WP_005012067.1|674564_675515_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
NZ_CP012132	Bordetella pertussis strain I187 chromosome, complete genome	4106507	694426	771735	4106507	protease,transposase,integrase,tRNA	Bacillus_phage(20.0%)	58	741563:741581	761451:761469
WP_023995489.1|694426_695377_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931335.1|695475_696951_-	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931334.1|698538_699426_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931333.1|699428_700370_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931332.1|700415_701981_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931331.1|703758_705084_-	aspartate aminotransferase family protein	NA	NA	NA	NA	NA
WP_010931330.1|705266_706724_+	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	21.1	7.6e-15
WP_003816386.1|706687_707185_-	dihydrofolate reductase	NA	A0A140HLG8	Bacillus_phage	38.9	3.0e-24
WP_010931328.1|707215_708187_-	thymidylate synthase	NA	J7KKN7	Erwinia_phage	33.3	4.8e-50
WP_003808444.1|708239_708677_-	OsmC family protein	NA	NA	NA	NA	NA
WP_010931327.1|708800_709469_+	2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase	NA	NA	NA	NA	NA
WP_003808448.1|710197_711301_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_171024626.1|711403_712681_+	Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB	NA	NA	NA	NA	NA
WP_010930472.1|712692_713718_+	Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC	NA	A0A2K9L4U8	Tupanvirus	44.2	4.7e-72
WP_010931325.1|713719_715090_+	polysaccharide biosynthesis C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010931324.1|715090_716227_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010931323.1|716273_718199_+	asparagine synthase (glutamine-hydrolyzing)	NA	A0A2K9R7N5	Dishui_lake_phycodnavirus	29.0	1.0e-27
WP_010931322.1|718195_719317_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010931321.1|719313_720468_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_010931320.1|720464_721595_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_003808462.1|721602_723168_-	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_010931319.1|723174_724557_-	phosphomannomutase/phosphoglucomutase	NA	A0A127AWJ1	Bacillus_phage	31.6	6.2e-51
WP_003808465.1|724835_725447_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931317.1|725538_726954_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_003818936.1|726971_727682_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_010931316.1|727678_729001_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_010931315.1|729080_731042_+	sulfatase-like hydrolase/transferase	NA	NA	NA	NA	NA
WP_003818932.1|731167_732481_-	fumarylacetoacetase	NA	NA	NA	NA	NA
WP_003818930.1|732589_733888_-	homogentisate 1,2-dioxygenase	NA	NA	NA	NA	NA
WP_010931314.1|734070_734979_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003808487.1|734988_735198_-	DUF2783 domain-containing protein	NA	NA	NA	NA	NA
WP_003808489.1|735209_736889_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931313.1|736990_737944_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010925978.1|738034_738862_-	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	NA	NA	NA	NA
WP_010931312.1|738860_740747_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_003818921.1|740743_741343_+	lipoprotein localization protein LolB	NA	NA	NA	NA	NA
WP_010931311.1|741391_742291_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
741563:741581	attL	CTGCCTGGCGTGGCCGAGT	NA	NA	NA	NA
WP_010931310.1|742499_743450_+	ribose-phosphate pyrophosphokinase	NA	A0A2K9L8D8	Tupanvirus	35.5	7.3e-43
WP_029443719.1|743572_744187_+	50S ribosomal protein L25/general stress protein Ctc	NA	NA	NA	NA	NA
WP_010931308.1|744315_744912_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931307.1|744908_745691_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_010931306.1|745763_746855_+	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_010931305.1|747134_748262_+|integrase	site-specific integrase	integrase	A0A1B0VMI6	Pseudomonas_phage	33.6	1.4e-48
WP_010931304.1|748603_749650_+	Fic family protein	NA	NA	NA	NA	NA
WP_010931303.1|749797_752917_+	DEAD/DEAH box helicase family protein	NA	NA	NA	NA	NA
WP_023994585.1|752918_755870_+	DNA methylase	NA	G8I4P9	Mycobacterium_phage	25.1	2.9e-21
WP_010931301.1|755885_757097_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010931070.1|757280_758231_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077274087.1|758247_758742_+	DUF4276 family protein	NA	NA	NA	NA	NA
WP_019247740.1|758745_759003_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019248455.1|759546_760458_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_029443992.1|760539_760824_+	ATP-dependent helicase	NA	A0A1V0SIN4	Klosneuvirus	34.1	6.8e-05
WP_005012067.1|761607_762558_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
761451:761469	attR	ACTCGGCCACGCCAGGCAG	NA	NA	NA	NA
WP_019247178.1|762976_765541_-	autotransporter domain-containing protein	NA	NA	NA	NA	NA
WP_019247179.1|765585_767439_-	autotransporter-associated beta strand repeat-containing protein	NA	NA	NA	NA	NA
WP_014905963.1|767771_769343_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_162291319.1|770611_770767_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|770784_771735_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 8
NZ_CP012132	Bordetella pertussis strain I187 chromosome, complete genome	4106507	1027074	1120062	4106507	transposase	Bacillus_virus(30.0%)	86	NA	NA
WP_005012067.1|1027074_1028025_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486100.1|1028127_1028790_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019249309.1|1028884_1029055_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247599.1|1029407_1030409_+	amidase	NA	NA	NA	NA	NA
WP_003818702.1|1030411_1031608_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486098.1|1031628_1032432_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_019247598.1|1032512_1032809_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247597.1|1032839_1033403_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014486097.1|1033443_1034301_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003818698.1|1034308_1035058_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.5	6.2e-29
WP_014486096.1|1035079_1035952_+	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_014486095.1|1035980_1036760_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486094.1|1036793_1037591_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003808978.1|1040245_1040638_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486091.1|1040631_1041492_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003818691.1|1041495_1042458_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_014486089.1|1043234_1043924_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.8	4.8e-12
WP_010930208.1|1044784_1045735_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931181.1|1046084_1046954_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010926062.1|1047024_1047720_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_010931179.1|1047709_1048219_+	nucleoside deaminase	NA	NA	NA	NA	NA
WP_010931178.1|1048215_1049436_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931177.1|1049383_1050286_-	transcriptional regulator GcvA	NA	NA	NA	NA	NA
WP_023997744.1|1051172_1052459_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931176.1|1052497_1053871_+	amidase	NA	NA	NA	NA	NA
WP_010931175.1|1053909_1054611_-	riboflavin synthase	NA	NA	NA	NA	NA
WP_010931174.1|1054909_1055899_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003809010.1|1055999_1056461_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931173.1|1056476_1057025_-	cysteine dioxygenase family protein	NA	NA	NA	NA	NA
WP_010931172.1|1057166_1058642_-	acyl--CoA ligase	NA	Q75ZG1	Hepacivirus	25.6	3.0e-35
WP_010931171.1|1058747_1059839_+	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
WP_010931170.1|1059842_1060625_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931169.1|1060634_1061423_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.0	1.1e-33
WP_010931168.1|1062548_1062983_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_010931167.1|1062979_1063990_-	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_003809025.1|1064033_1064960_-	VOC family protein	NA	NA	NA	NA	NA
WP_003809026.1|1065246_1065615_+	DUF861 domain-containing protein	NA	NA	NA	NA	NA
WP_154698394.1|1065667_1065814_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853143.1|1065831_1066782_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931165.1|1066826_1069253_+	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	33.8	1.2e-86
WP_010931164.1|1069301_1069994_+	HD domain-containing protein	NA	A0A1D6Y7U0	Golden_Marseillevirus	29.9	4.7e-07
WP_010931163.1|1070066_1071266_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_003819549.1|1071283_1072189_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931162.1|1072304_1073234_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010931161.1|1073259_1074606_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931160.1|1074633_1075383_+	SDR family oxidoreductase	NA	A0A0M4JSW6	Mollivirus	26.4	1.2e-11
WP_010931159.1|1075396_1076179_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_005012067.1|1076371_1077322_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931158.1|1077383_1078493_-	porin	NA	NA	NA	NA	NA
WP_003815281.1|1079005_1079842_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
WP_023997028.1|1079911_1080877_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|1080873_1081824_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023998107.1|1081841_1082012_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247492.1|1082209_1082752_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1083787_1084738_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247402.1|1084979_1085348_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019248356.1|1085393_1086518_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931156.1|1087652_1088405_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931155.1|1088496_1089117_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852714.1|1089220_1090171_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931154.1|1090167_1092276_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003820814.1|1092420_1093080_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_003820813.1|1093111_1093576_-	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_019248355.1|1093851_1094037_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931153.1|1094088_1094841_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931152.1|1094847_1096110_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_023852748.1|1096151_1097390_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820806.1|1098467_1099595_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_003814524.1|1099605_1100433_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_010931150.1|1100419_1101286_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010931149.1|1102652_1103057_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446288.1|1103419_1104331_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003820799.1|1104345_1105056_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931147.1|1105052_1106297_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003820797.1|1106298_1106733_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_003814535.1|1106761_1107067_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_005012067.1|1107165_1108116_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247277.1|1108172_1109327_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_010930176.1|1109401_1110352_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931144.1|1110883_1111681_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247918.1|1111728_1112382_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003814544.1|1112338_1113427_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_003814547.1|1113591_1115817_-	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_023852715.1|1118094_1118991_+	inositol monophosphatase	NA	NA	NA	NA	NA
WP_162268686.1|1118944_1119094_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1119111_1120062_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP012132	Bordetella pertussis strain I187 chromosome, complete genome	4106507	1150448	1221419	4106507	protease,transposase	uncultured_Mediterranean_phage(25.0%)	53	NA	NA
WP_005012808.1|1150448_1151399_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931130.1|1151455_1152568_+	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_005012067.1|1154951_1155902_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931129.1|1156492_1157269_+	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_003812908.1|1157386_1157650_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931128.1|1157750_1158755_-	FecR domain-containing protein	NA	NA	NA	NA	NA
WP_010931127.1|1158955_1160557_-	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931126.1|1160582_1161341_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931125.1|1161432_1162089_-	adenylate kinase	NA	NA	NA	NA	NA
WP_010931124.1|1162179_1162944_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003812895.1|1162953_1163142_-	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931123.1|1163197_1164241_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_010931122.1|1164237_1164651_-	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_003812889.1|1164647_1165268_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_005012067.1|1165548_1166499_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931120.1|1166666_1168058_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_010931119.1|1168130_1168709_+	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_019247560.1|1168825_1170223_+	chloride channel protein	NA	NA	NA	NA	NA
WP_010931117.1|1170338_1171544_+	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_003820399.1|1171643_1172162_-	DUF192 domain-containing protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_003812875.1|1172256_1172502_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820400.1|1172729_1173044_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_010931116.1|1173133_1178323_+	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_010931115.1|1178319_1180488_+	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_010931114.1|1180543_1182859_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.1e-164
WP_003820402.1|1182863_1184183_+	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_014905522.1|1184201_1185875_+	MCE family protein	NA	NA	NA	NA	NA
WP_010931111.1|1185879_1186548_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_010931110.1|1186704_1190526_+	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_154698391.1|1190680_1190839_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930800.1|1190856_1191807_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812857.1|1191828_1192974_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|1193122_1194052_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812851.1|1194048_1195137_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_010931109.1|1195133_1195937_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812846.1|1195933_1196665_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931108.1|1196722_1198012_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931107.1|1198108_1198711_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812839.1|1203264_1203603_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931105.1|1204310_1204577_+	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_005012067.1|1206283_1207234_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931103.1|1207230_1208562_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931102.1|1209822_1211823_+	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_003819722.1|1211815_1212457_+	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_003809276.1|1212453_1212861_+	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_010931101.1|1212857_1213658_+	SURF1 family protein	NA	NA	NA	NA	NA
WP_010931100.1|1213732_1214437_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931099.1|1214468_1215263_+	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_005013747.1|1215259_1216210_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995489.1|1216308_1217259_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812014.1|1217357_1217792_-	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_010931098.1|1217874_1220211_+	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.8	3.2e-124
WP_010930525.1|1220402_1221419_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP012132	Bordetella pertussis strain I187 chromosome, complete genome	4106507	1268813	1349688	4106507	transposase,tRNA	Bacillus_virus(25.0%)	59	NA	NA
WP_010927663.1|1268813_1269764_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931070.1|1269760_1270711_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931069.1|1270971_1272000_-	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010931068.1|1272079_1273378_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_003816847.1|1273374_1273956_-	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010931067.1|1274268_1278315_+	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
WP_010931066.1|1278555_1286217_+	hemagglutinin repeat-containing protein	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
WP_005012067.1|1286213_1287164_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931065.1|1288303_1288777_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931064.1|1288916_1289537_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010931063.1|1289672_1290473_+	aldolase	NA	NA	NA	NA	NA
WP_003810897.1|1290527_1291619_+	TRAP transporter substrate-binding protein DctP	NA	NA	NA	NA	NA
WP_010931062.1|1291640_1292084_-	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_010931061.1|1292112_1292745_-	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA	NA
WP_003810909.1|1292855_1293272_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931060.1|1293264_1293957_+	DUF2238 domain-containing protein	NA	NA	NA	NA	NA
WP_010931059.1|1294063_1294438_+	MAPEG family protein	NA	NA	NA	NA	NA
WP_010931058.1|1294514_1295324_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931057.1|1295419_1296364_+	dihydrodipicolinate synthase family protein	NA	NA	NA	NA	NA
WP_003816577.1|1296402_1297374_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003810921.1|1297464_1297902_-	carboxypeptidase regulatory-like domain-containing protein	NA	NA	NA	NA	NA
WP_029443733.1|1297960_1298842_-	NRDE family protein	NA	NA	NA	NA	NA
WP_010931054.1|1299845_1300706_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010931053.1|1300738_1302121_+	FAD-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	28.4	7.9e-30
WP_010931052.1|1302117_1303137_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247407.1|1303509_1304004_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931051.1|1304011_1304752_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931050.1|1304832_1306437_-	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA	NA
WP_010931049.1|1306476_1307265_-	DeoR family transcriptional regulator	NA	A0A077SK06	Escherichia_phage	30.4	2.0e-22
WP_010931048.1|1308467_1309556_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.1	9.7e-15
WP_010931047.1|1310436_1311249_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_004568502.1|1311261_1311570_+	DUF2160 domain-containing protein	NA	NA	NA	NA	NA
WP_010931046.1|1311687_1313418_+	carbohydrate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019249399.1|1313419_1314565_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931044.1|1314694_1315363_-	DUF502 domain-containing protein	NA	NA	NA	NA	NA
WP_003810957.1|1315484_1315952_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_019247521.1|1316087_1317470_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_014486086.1|1317466_1318591_+	DNA repair exonuclease	NA	NA	NA	NA	NA
WP_010931042.1|1318587_1321224_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010931070.1|1321639_1322590_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931041.1|1326336_1326948_-	DUF2239 family protein	NA	NA	NA	NA	NA
WP_003812368.1|1327170_1328631_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.3	1.6e-97
WP_010931040.1|1328727_1330320_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	33.3	1.0e-17
WP_019247974.1|1330673_1330931_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003816876.1|1330932_1332273_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010931038.1|1332368_1333058_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247976.1|1333070_1334501_+	MFS transporter	NA	NA	NA	NA	NA
WP_014905903.1|1336225_1337047_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931036.1|1337057_1338629_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010931035.1|1338657_1339635_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931034.1|1339661_1340465_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.2	2.7e-30
WP_010931033.1|1340461_1341256_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003816890.1|1341263_1342499_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_010931032.1|1342491_1342926_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|1343675_1344626_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931031.1|1345247_1346975_-	sulfate permease	NA	NA	NA	NA	NA
WP_010931030.1|1347086_1348445_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_023853289.1|1348501_1348720_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1348737_1349688_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_CP012132	Bordetella pertussis strain I187 chromosome, complete genome	4106507	1469079	1521232	4106507	transposase,tRNA	Salmonella_phage(25.0%)	46	NA	NA
WP_005013747.1|1469079_1470030_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023999730.1|1470047_1470200_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814065.1|1470196_1470550_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814063.1|1470562_1470925_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814061.1|1470966_1471392_-	DUF1841 family protein	NA	NA	NA	NA	NA
WP_003814059.1|1471594_1472851_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	64.8	1.2e-11
WP_003814057.1|1473049_1474030_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005015028.1|1474179_1475421_+	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1475519_1476470_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814052.1|1476478_1477174_-	two-component system response regulator KdpE	NA	NA	NA	NA	NA
WP_003814050.1|1479995_1480595_-	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
WP_010930950.1|1480605_1482771_-	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	27.1	1.2e-24
WP_010930949.1|1482794_1484579_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA	NA
WP_017685545.1|1484578_1484668_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_003814042.1|1485362_1485635_+	DUF4212 domain-containing protein	NA	NA	NA	NA	NA
WP_003814040.1|1485634_1487701_+	cation acetate symporter	NA	NA	NA	NA	NA
WP_010929577.1|1487697_1488648_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|1488746_1489697_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005015014.1|1489812_1490145_-	multidrug transporter	NA	NA	NA	NA	NA
WP_010929073.1|1490141_1490828_-	Smr/MutS family protein	NA	NA	NA	NA	NA
WP_010930948.1|1490814_1491774_-	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
WP_003814032.1|1491815_1494176_+	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
WP_010930946.1|1494175_1494808_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_010930945.1|1494909_1496250_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
WP_010930944.1|1496296_1497652_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
WP_170954289.1|1497777_1498422_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814024.1|1498366_1498684_-	virulence factor	NA	NA	NA	NA	NA
WP_003814023.1|1498956_1499472_-	hypothetical protein	NA	T1SAR8	Salmonella_phage	44.6	5.1e-06
WP_003814022.1|1499565_1499727_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814021.1|1499742_1500498_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_019247690.1|1500836_1501043_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814020.1|1501050_1501710_-	NAAT family transporter	NA	NA	NA	NA	NA
WP_010930941.1|1502004_1504209_-	TonB-dependent alcaligin siderophore receptor FauA	NA	NA	NA	NA	NA
WP_010930940.1|1504319_1505543_-	alcaligin siderophore export MFS transporter Bcr	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
WP_003814017.1|1505665_1506640_-	alcaligin siderophore biosynthesis transcriptional regulator AlcR	NA	NA	NA	NA	NA
WP_005013753.1|1506707_1507901_-	alcaligin siderophore biosynthesis protein AlcE	NA	NA	NA	NA	NA
WP_003814016.1|1507915_1508716_-	alcaligin siderophore biosynthesis protein AlcD	NA	NA	NA	NA	NA
WP_010930939.1|1508712_1510569_-	alcaligin siderophore biosynthesis protein AlcC	NA	NA	NA	NA	NA
WP_003814014.1|1510565_1511171_-	alcaligin siderophore biosynthesis protein AlcB	NA	NA	NA	NA	NA
WP_003814013.1|1511189_1512575_-	alcaligin siderophore biosynthesis protein AlcA	NA	NA	NA	NA	NA
WP_003814012.1|1513300_1514527_+	cation:proton antiporter	NA	NA	NA	NA	NA
WP_003814011.1|1514615_1515398_+	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|1515496_1516447_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814010.1|1516473_1517247_+	peroxide stress protein YaaA	NA	NA	NA	NA	NA
WP_003814009.1|1517258_1518500_+	MFS transporter	NA	NA	NA	NA	NA
WP_076879548.1|1520281_1521232_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_CP012132	Bordetella pertussis strain I187 chromosome, complete genome	4106507	1565157	1633246	4106507	transposase,tRNA	Streptococcus_virus(11.11%)	59	NA	NA
WP_010930416.1|1565157_1565646_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_019248504.1|1565763_1566342_+	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010930418.1|1566447_1566816_+	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|1566914_1567865_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994932.1|1567871_1568984_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
WP_010930419.1|1569670_1570873_+	MFS transporter	NA	NA	NA	NA	NA
WP_004568212.1|1570908_1571055_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930420.1|1571076_1573737_+	PD-(D/E)XK nuclease family protein	NA	NA	NA	NA	NA
WP_010930421.1|1573749_1577154_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_023995689.1|1577821_1580047_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.5	1.2e-43
WP_010930423.1|1580093_1580420_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_010930424.1|1580470_1581079_+	recombination protein RecR	NA	NA	NA	NA	NA
WP_005013747.1|1581177_1582128_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930425.1|1582197_1582962_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930426.1|1582958_1583558_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930427.1|1583661_1584513_-	neutral zinc metallopeptidase	NA	A0A1I9SA48	Rhodococcus_phage	35.3	7.0e-37
WP_010928449.1|1584572_1585199_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
WP_005012067.1|1585195_1586146_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019249265.1|1586244_1587357_-	DUF1513 domain-containing protein	NA	NA	NA	NA	NA
WP_019248041.1|1587346_1588348_-	imelysin family protein	NA	NA	NA	NA	NA
WP_019247498.1|1588453_1589965_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_023853587.1|1589961_1591266_-	imelysin	NA	NA	NA	NA	NA
WP_010930431.1|1591377_1591938_-	membrane protein	NA	NA	NA	NA	NA
WP_010930432.1|1592205_1592760_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	32.0	1.7e-15
WP_010930433.1|1593215_1593431_-	dodecin domain-containing protein	NA	NA	NA	NA	NA
WP_033446228.1|1593685_1596283_+	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	22.6	1.5e-21
WP_010930435.1|1596279_1597467_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010930436.1|1598128_1598743_+	serotype 3 fimbrial subunit	NA	NA	NA	NA	NA
WP_010930437.1|1598831_1599959_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA	NA
WP_033446216.1|1599970_1600876_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_005012067.1|1601768_1602719_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930439.1|1602900_1603653_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
WP_003811112.1|1603721_1604381_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
WP_003811113.1|1604377_1605106_+	glutamine ABC transporter ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	39.3	3.3e-35
WP_010930440.1|1605118_1607398_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	32.1	5.9e-06
WP_010930441.1|1607422_1607626_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_010930442.1|1607667_1608300_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	33.9	2.4e-13
WP_010930443.1|1608435_1609353_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_010930444.1|1609349_1610063_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_003811135.1|1610300_1611071_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003811137.1|1611075_1611675_-	C40 family peptidase	NA	A0A0A8WF62	Clostridium_phage	41.6	1.4e-20
WP_003811138.1|1611919_1613410_+	AMP nucleosidase	NA	NA	NA	NA	NA
WP_010926696.1|1613468_1613753_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930445.1|1613890_1614046_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811148.1|1614318_1615245_-	YicC family protein	NA	NA	NA	NA	NA
WP_003811149.1|1615381_1616122_+	ribonuclease PH	NA	NA	NA	NA	NA
WP_010930446.1|1616288_1617665_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003811152.1|1617846_1618752_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930448.1|1620403_1622206_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010930449.1|1622332_1622974_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA	NA
WP_005012808.1|1623072_1624023_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930450.1|1624044_1625265_+	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
WP_003811164.1|1625450_1626863_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_003811167.1|1626926_1627994_+	PAS domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
WP_010930451.1|1627993_1629481_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
WP_010930452.1|1629490_1630435_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811176.1|1630594_1631293_+	pirin family protein	NA	NA	NA	NA	NA
WP_010930453.1|1631370_1632276_+	pirin family protein	NA	NA	NA	NA	NA
WP_005012067.1|1632295_1633246_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP012132	Bordetella pertussis strain I187 chromosome, complete genome	4106507	1669195	1724786	4106507	transposase	Brazilian_cedratvirus(25.0%)	47	NA	NA
WP_005013747.1|1669195_1670146_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930486.1|1670204_1670978_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486074.1|1670970_1672527_+	LTA synthase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1672523_1673474_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810741.1|1674800_1675403_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810743.1|1675642_1676344_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003816696.1|1676337_1677120_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_005012808.1|1677304_1678255_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930483.1|1678353_1679091_-	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_010926609.1|1679280_1680039_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930482.1|1680085_1681075_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930481.1|1681252_1682221_-	transporter	NA	NA	NA	NA	NA
WP_010930480.1|1683760_1684729_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930479.1|1684737_1685679_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|1686152_1687163_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930477.1|1687153_1688668_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930476.1|1688664_1690011_+	BatD family protein	NA	NA	NA	NA	NA
WP_010930475.1|1690013_1691048_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_023852967.1|1691097_1692723_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_005012067.1|1693275_1694226_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930487.1|1694330_1695278_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247865.1|1695331_1697146_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_010930489.1|1697138_1697813_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_023995112.1|1697942_1701017_+	autotransporter SphB2	NA	NA	NA	NA	NA
WP_019247905.1|1701030_1701330_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930492.1|1701644_1702268_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_010930493.1|1702511_1703381_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010930494.1|1703358_1704303_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247909.1|1704388_1705315_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247910.1|1705427_1706207_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930497.1|1706197_1707394_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010930498.1|1707424_1708375_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_010930499.1|1708596_1709286_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930500.1|1709350_1710106_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930501.1|1710157_1711150_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930502.1|1711159_1712113_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811538.1|1712228_1713191_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019249376.1|1714592_1715021_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1715017_1715968_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_170954298.1|1716261_1716999_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_010930504.1|1717422_1718610_-	MFS transporter	NA	NA	NA	NA	NA
WP_019249653.1|1718613_1718994_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930506.1|1720713_1721685_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930507.1|1721698_1722412_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930508.1|1722416_1723334_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811452.1|1723440_1723737_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929588.1|1723835_1724786_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP012132	Bordetella pertussis strain I187 chromosome, complete genome	4106507	1958600	2028252	4106507	transposase,tRNA	Staphylococcus_phage(16.67%)	55	NA	NA
WP_003818515.1|1958600_1961258_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	39.0	3.3e-173
WP_010930709.1|1961335_1962538_-	MFS transporter	NA	NA	NA	NA	NA
WP_003810260.1|1962534_1963047_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247822.1|1963169_1963607_-	HU family DNA-binding protein	NA	NA	NA	NA	NA
WP_010931070.1|1963883_1964834_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077069014.1|1964932_1965883_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930710.1|1966136_1967942_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.5	2.2e-19
WP_010930711.1|1968055_1968223_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_003810297.1|1968286_1968523_-	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_010930712.1|1968891_1970091_-	multidrug effflux MFS transporter	NA	NA	NA	NA	NA
WP_010929591.1|1971606_1972557_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818523.1|1973008_1974010_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810306.1|1974182_1975040_+	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA	NA
WP_003810308.1|1975036_1976299_+	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.8e-28
WP_003818524.1|1976399_1976774_+	tautomerase family protein	NA	NA	NA	NA	NA
WP_010930713.1|1976846_1978034_+	acetyl-CoA C-acyltransferase family protein	NA	NA	NA	NA	NA
WP_010930714.1|1978118_1978889_+	spermidine synthase	NA	NA	NA	NA	NA
WP_010930715.1|1979002_1979767_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930716.1|1979717_1981019_+	malonyl-CoA decarboxylase family protein	NA	NA	NA	NA	NA
WP_010930717.1|1981015_1981822_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003818532.1|1983566_1984538_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003818533.1|1984694_1985207_+	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	52.3	1.8e-43
WP_010930718.1|1985365_1986340_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930719.1|1987340_1988135_+	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.7	5.1e-05
WP_003818535.1|1988160_1988967_-	TOBE domain-containing protein	NA	NA	NA	NA	NA
WP_003810329.1|1989077_1989668_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_010930720.1|1989678_1990857_+	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_010930721.1|1990959_1991334_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_019248531.1|1991586_1992918_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_019247651.1|1992984_1996215_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_003810344.1|1997705_1998452_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_010930724.1|1998536_1998998_+	holo-ACP synthase	NA	NA	NA	NA	NA
WP_010930725.1|1999035_2000094_+	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_010930726.1|2000056_2001886_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_003810356.1|2001925_2002498_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930727.1|2003922_2004744_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	4.1e-42
WP_010930728.1|2005062_2006385_+	isocitrate lyase	NA	NA	NA	NA	NA
WP_010930729.1|2006744_2007380_+	membrane protein	NA	NA	NA	NA	NA
WP_010930730.1|2007339_2008290_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930731.1|2009160_2010033_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930732.1|2010110_2011250_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930733.1|2011608_2012865_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_003816691.1|2012870_2013398_+	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_003816690.1|2013402_2014221_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003816687.1|2014220_2014943_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930735.1|2014964_2015279_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930736.1|2015296_2016445_+	CoA transferase	NA	NA	NA	NA	NA
WP_010930737.1|2016475_2017351_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816680.1|2017347_2018667_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_014486081.1|2018739_2019936_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_010930739.1|2019946_2021434_-	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_010930740.1|2024028_2024928_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852887.1|2025065_2026031_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005015810.1|2026129_2027080_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2027301_2028252_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP012132	Bordetella pertussis strain I187 chromosome, complete genome	4106507	2039748	2089144	4106507	transposase	Erysipelothrix_phage(16.67%)	45	NA	NA
WP_005013747.1|2039748_2040699_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812172.1|2041836_2042133_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247707.1|2042307_2043660_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	2.9e-45
WP_010930153.1|2043802_2044819_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930748.1|2046798_2047812_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_010930749.1|2047898_2048804_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812179.1|2048960_2049305_+	exported protein	NA	NA	NA	NA	NA
WP_010930750.1|2049462_2049921_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_010930751.1|2049934_2052151_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_003812183.1|2052147_2053209_+	XdhC family protein	NA	NA	NA	NA	NA
WP_010930752.1|2053237_2054212_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930753.1|2054163_2054982_-	hypothetical protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	28.8	2.3e-16
WP_003812191.1|2054994_2055603_-	LON peptidase substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930754.1|2055777_2056173_+	VOC family protein	NA	NA	NA	NA	NA
WP_010930755.1|2056191_2057631_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	37.4	7.4e-55
WP_003812199.1|2057659_2058007_+	GFA family protein	NA	NA	NA	NA	NA
WP_010929577.1|2058025_2058976_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2059628_2060579_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997035.1|2060662_2062480_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
WP_019247659.1|2062553_2063201_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930758.1|2063213_2064143_-	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_014905663.1|2064312_2064777_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003816977.1|2065024_2065705_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003816975.1|2065753_2067445_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
WP_010930760.1|2067460_2068012_-	SRPBCC family protein	NA	NA	NA	NA	NA
WP_003816971.1|2068008_2068380_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930761.1|2068492_2069329_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_029443822.1|2069339_2069864_-	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_003812228.1|2069961_2070141_+	DUF3008 family protein	NA	NA	NA	NA	NA
WP_010930763.1|2070270_2071245_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003816964.1|2071375_2071732_+	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
WP_010930764.1|2071721_2072597_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_010930765.1|2072695_2073580_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930766.1|2073601_2074897_-	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_003816959.1|2075845_2076496_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930767.1|2076583_2078104_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930768.1|2078361_2080227_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|2081272_2082223_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268681.1|2082240_2082381_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930769.1|2083195_2083555_-	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_010930770.1|2083542_2084979_-	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930771.1|2084975_2085629_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930772.1|2085625_2086819_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930773.1|2086922_2088197_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_005012067.1|2088193_2089144_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
NZ_CP012132	Bordetella pertussis strain I187 chromosome, complete genome	4106507	2100348	2141039	4106507	protease,transposase,tRNA	Klosneuvirus(25.0%)	36	NA	NA
WP_005013747.1|2100348_2101299_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2101397_2102348_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122784.1|2102307_2102721_-	transcriptional regulator	NA	A0A222YXG1	Escherichia_phage	59.0	3.8e-36
WP_003816708.1|2103005_2103305_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930783.1|2103714_2105997_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	30.1	3.2e-36
WP_010930784.1|2106682_2108713_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	41.9	1.0e-65
WP_006218592.1|2108732_2108945_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_003810720.1|2109222_2109762_-	phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_023852902.1|2109875_2111171_-	adenylosuccinate synthase	NA	A0A160ER07	Powai_lake_megavirus	33.5	3.0e-63
WP_010930786.1|2111247_2112405_-	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
WP_010930787.1|2112588_2113488_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_010930788.1|2113506_2114811_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930789.1|2114776_2115883_-	GTPase HflX	NA	NA	NA	NA	NA
WP_003810707.1|2115970_2116207_-	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930790.1|2116345_2117416_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810703.1|2117419_2118775_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_003810701.1|2118801_2119962_-	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_010930791.1|2119964_2120603_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_023995843.1|2120604_2121891_-|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930793.1|2121949_2123245_-	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_003810693.1|2123251_2123758_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_004568542.1|2123754_2124903_-	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_003810689.1|2124930_2125356_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
WP_010930794.1|2125678_2128561_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
WP_023852900.1|2128653_2129409_-	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_010930796.1|2130174_2131524_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_076879566.1|2131622_2132573_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930048.1|2132671_2133622_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930594.1|2133695_2134169_+	RidA family protein	NA	NA	NA	NA	NA
WP_010930593.1|2134194_2135403_+	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_003816734.1|2135399_2136173_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_014905757.1|2136172_2136796_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_010926757.1|2136961_2137222_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_010930591.1|2137525_2138107_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004568544.1|2138173_2138428_-	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_010930590.1|2138414_2141039_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
>prophage 17
NZ_CP012132	Bordetella pertussis strain I187 chromosome, complete genome	4106507	2168822	2234371	4106507	protease,transposase,tRNA	Lake_Baikal_phage(20.0%)	58	NA	NA
WP_010929577.1|2168822_2169773_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930573.1|2169973_2170783_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_005013747.1|2170907_2171858_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930572.1|2171854_2172748_-	methylglyoxal synthase	NA	NA	NA	NA	NA
WP_003812452.1|2172872_2173067_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA	NA
WP_003812453.1|2173066_2173408_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_010930571.1|2173417_2175280_-	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	42.4	3.0e-101
WP_003812456.1|2175409_2175922_-	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA	NA
WP_003812458.1|2175924_2176248_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	52.8	6.8e-25
WP_003812460.1|2176249_2176660_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	79.0	7.5e-53
WP_010930570.1|2176697_2177909_-	IscS subfamily cysteine desulfurase	NA	NA	NA	NA	NA
WP_003812463.1|2177926_2178439_-	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA	NA
WP_010930569.1|2178654_2179146_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
WP_010930568.1|2179398_2181435_-	excinuclease ABC subunit UvrB	NA	NA	NA	NA	NA
WP_019247244.1|2181512_2182715_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_010930566.1|2182843_2183494_+	transcriptional repressor LexA	NA	A0A2H4JG58	uncultured_Caudovirales_phage	50.7	3.3e-10
WP_005012067.1|2185051_2186002_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247934.1|2186572_2186785_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247935.1|2186802_2187534_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812478.1|2187568_2188210_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010930565.1|2188202_2188871_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010930564.1|2191083_2191860_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930563.1|2191881_2193039_-	thiolase	NA	NA	NA	NA	NA
WP_003812491.1|2193035_2193467_-	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_015063637.1|2193463_2194267_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010930561.1|2194280_2194682_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_010930560.1|2194748_2195720_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930559.1|2195785_2197009_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247936.1|2197236_2198187_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930557.1|2198310_2200764_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.0	1.5e-220
WP_010930556.1|2200952_2202257_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	53.8	3.2e-129
WP_003812508.1|2202361_2203015_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	57.5	6.8e-56
WP_010930555.1|2203017_2204328_-	trigger factor	NA	NA	NA	NA	NA
WP_010930554.1|2204524_2205085_+	TIGR00645 family protein	NA	K4K6D8	Caulobacter_phage	33.7	1.0e-23
WP_010930553.1|2205196_2205397_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.4	7.4e-14
WP_003812519.1|2205742_2206309_-	DUF924 family protein	NA	NA	NA	NA	NA
WP_010930551.1|2206392_2206596_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.1	1.6e-16
WP_003812524.1|2206902_2207223_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812526.1|2207264_2207546_-	membrane protein	NA	NA	NA	NA	NA
WP_010930550.1|2207620_2208877_-	autotransporter Phg	NA	NA	NA	NA	NA
WP_010930549.1|2209259_2209589_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003812536.1|2211159_2211981_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
WP_010930548.1|2211980_2213120_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
WP_019247938.1|2213126_2214023_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_010930546.1|2214019_2215945_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	31.8	1.1e-66
WP_010926400.1|2216304_2218917_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_003812546.1|2218969_2221270_-	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	35.9	9.9e-110
WP_003812548.1|2221266_2222475_-	fatty acid desaturase	NA	NA	NA	NA	NA
WP_010930545.1|2222736_2223111_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2223107_2224058_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879626.1|2224156_2226151_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.3	4.4e-21
WP_010930543.1|2226210_2227176_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_010930542.1|2227165_2230027_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
WP_010930541.1|2230029_2230536_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_010930540.1|2230640_2231849_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	30.0	3.8e-36
WP_033446178.1|2231850_2232789_-	membrane protein	NA	NA	NA	NA	NA
WP_010930538.1|2232950_2233424_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|2233420_2234371_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
NZ_CP012132	Bordetella pertussis strain I187 chromosome, complete genome	4106507	2320548	2384126	4106507	protease,transposase	uncultured_Caudovirales_phage(11.11%)	49	NA	NA
WP_010931070.1|2320548_2321499_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809615.1|2321800_2322277_-	transcription elongation factor GreA	NA	NA	NA	NA	NA
WP_019247142.1|2322900_2324538_+	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	30.2	8.8e-12
WP_003809610.1|2324568_2325882_-	pyrimidine permease	NA	Q9KX94	Enterobacteria_phage	67.1	2.1e-149
WP_004568205.1|2326015_2326333_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023852827.1|2326433_2327756_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|2327752_2328703_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2328801_2329752_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930836.1|2330281_2331304_-	putative 2-aminoethylphosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003820286.1|2331332_2332163_-	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA	NA
WP_029443740.1|2332179_2333877_-	putative 2-aminoethylphosphonate ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010930838.1|2333941_2335018_-	putative 2-aminoethylphosphonate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.8	1.2e-28
WP_010930839.1|2335177_2336041_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930840.1|2336071_2336641_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010930841.1|2336657_2337509_-	sulfurtransferase	NA	NA	NA	NA	NA
WP_003813142.1|2338566_2339448_+|protease	protease HtpX	protease	NA	NA	NA	NA
WP_010930842.1|2339522_2340512_-	quinone oxidoreductase	NA	NA	NA	NA	NA
WP_010930843.1|2340574_2341525_-	DMT family transporter	NA	NA	NA	NA	NA
WP_003813147.1|2341587_2342445_+	DMT family transporter	NA	NA	NA	NA	NA
WP_003813149.1|2342504_2342993_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930844.1|2344565_2345756_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_010930845.1|2345752_2347339_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_010930846.1|2347357_2348425_-	tartrate dehydrogenase	NA	NA	NA	NA	NA
WP_010930847.1|2348529_2350074_-	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	25.4	3.1e-14
WP_010930848.1|2350493_2352068_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930849.1|2352175_2353192_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003813165.1|2353188_2354028_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930850.1|2354032_2355670_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	3.6e-21
WP_005013747.1|2355666_2356617_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268683.1|2356634_2356778_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930851.1|2356759_2358034_+	4-aminobutyrate--2-oxoglutarate transaminase	NA	A0A1V0SKB7	Klosneuvirus	27.9	1.6e-24
WP_010930852.1|2358063_2358354_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_047122810.1|2358426_2359440_+	histone deacetylase family protein	NA	A0A2K9L4C2	Tupanvirus	35.2	1.7e-42
WP_010930854.1|2359459_2360722_+	Zn-dependent hydrolase	NA	NA	NA	NA	NA
WP_010930855.1|2360724_2361648_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010930856.1|2361644_2363138_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930857.1|2363148_2364081_-	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA	NA
WP_076879554.1|2364262_2365588_+	aspartate aminotransferase family protein	NA	A0A1C9EHH3	Mycobacterium_phage	22.5	1.8e-07
WP_023853659.1|2365622_2366966_-	sodium:alanine symporter family protein	NA	NA	NA	NA	NA
WP_023853666.1|2367038_2368559_-	DUF853 domain-containing protein	NA	A0A248XCZ8	Klebsiella_phage	44.9	1.7e-78
WP_010930861.1|2368713_2369445_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_010930862.1|2369512_2370853_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_010930863.1|2370868_2371780_+	oxygen-dependent coproporphyrinogen oxidase	NA	NA	NA	NA	NA
WP_010930864.1|2371770_2372364_+	nicotinate (nicotinamide) nucleotide adenylyltransferase	NA	NA	NA	NA	NA
WP_003813196.1|2372425_2372812_+	ribosome silencing factor	NA	NA	NA	NA	NA
WP_003813199.1|2372823_2373294_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
WP_010930865.1|2373305_2373929_+	septum formation inhibitor Maf	NA	NA	NA	NA	NA
WP_010930866.1|2373949_2376697_-	autotransporter Vag8	NA	NA	NA	NA	NA
WP_005012808.1|2383175_2384126_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
NZ_CP012132	Bordetella pertussis strain I187 chromosome, complete genome	4106507	2529067	2587311	4106507	transposase,tRNA	Planktothrix_phage(28.57%)	54	NA	NA
WP_005012067.1|2529067_2530018_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930388.1|2530497_2531154_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA	NA
WP_010930387.1|2531168_2532836_-	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_010930386.1|2532838_2533468_-	TRAP transporter small permease subunit	NA	NA	NA	NA	NA
WP_014486072.1|2533679_2534774_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930384.1|2534918_2535731_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_023853502.1|2535734_2537438_-	FimV N-terminal domain protein	NA	NA	NA	NA	NA
WP_010930382.1|2537488_2538619_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930381.1|2538805_2539882_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_010930380.1|2539963_2540614_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_010930379.1|2540628_2542032_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
WP_004567445.1|2542315_2543134_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930378.1|2543130_2543835_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.0	2.6e-13
WP_010930377.1|2544734_2545850_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_004567447.1|2545883_2546258_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930376.1|2546280_2547438_-	formate dehydrogenase subunit gamma	NA	NA	NA	NA	NA
WP_003812666.1|2547450_2547684_-	lipoprotein	NA	NA	NA	NA	NA
WP_019247523.1|2548318_2551288_-	formate dehydrogenase subunit alpha	NA	NA	NA	NA	NA
WP_023853518.1|2551302_2551512_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248667.1|2551663_2552293_-	molecular chaperone TorD family protein	NA	NA	NA	NA	NA
WP_010930373.1|2552289_2554380_-	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_010930372.1|2554403_2555084_-	DUF3306 domain-containing protein	NA	NA	NA	NA	NA
WP_003820494.1|2555080_2555641_-	DUF3305 domain-containing protein	NA	NA	NA	NA	NA
WP_004567450.1|2555647_2556745_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010930371.1|2556897_2557491_+	molybdenum cofactor guanylyltransferase MobA	NA	NA	NA	NA	NA
WP_010930370.1|2557487_2558780_+	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_003812685.1|2558793_2559336_+	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA	NA
WP_010930369.1|2559345_2560182_-	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003820487.1|2560215_2561277_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	42.8	2.9e-80
WP_019247210.1|2561318_2562371_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_019247209.1|2562386_2562689_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|2562830_2563781_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268680.1|2563798_2563963_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930368.1|2563959_2565654_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003809599.1|2565650_2566736_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	6.4e-27
WP_010930367.1|2566783_2567683_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003809593.1|2567693_2568338_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_010930366.1|2569359_2572602_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_023852833.1|2572612_2573767_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.4	3.3e-53
WP_010930364.1|2573993_2574956_+	transaldolase	NA	H6WFR1	Cyanophage	29.2	7.5e-11
WP_005013747.1|2575054_2576005_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930363.1|2576103_2577054_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930362.1|2577063_2577753_-	VIT family protein	NA	NA	NA	NA	NA
WP_003811741.1|2577812_2578250_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003811743.1|2578295_2579189_-	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003811746.1|2579236_2580409_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003811748.1|2580405_2581560_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003811750.1|2581756_2582107_-	RnfH family protein	NA	NA	NA	NA	NA
WP_003811752.1|2582096_2582531_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_010930800.1|2582547_2583498_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811754.1|2583645_2584113_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
WP_010930360.1|2584093_2585251_-	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
WP_003811759.1|2585316_2586243_-	paraslipin	NA	NA	NA	NA	NA
WP_005012067.1|2586360_2587311_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NZ_CP012132	Bordetella pertussis strain I187 chromosome, complete genome	4106507	2629591	2696091	4106507	transposase	uncultured_Caudovirales_phage(40.0%)	56	NA	NA
WP_005012067.1|2629591_2630542_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811850.1|2630911_2631484_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA	NA
WP_003811852.1|2631486_2632497_+	flagellar motor switch protein FliM	NA	NA	NA	NA	NA
WP_010930335.1|2632489_2632990_+	flagellar motor switch protein FliN	NA	NA	NA	NA	NA
WP_003811855.1|2633000_2633342_+	flagellar biosynthetic protein FliO	NA	NA	NA	NA	NA
WP_015041547.1|2633353_2634145_+	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA	NA
WP_003811859.1|2634161_2634431_+	flagellar biosynthesis protein FliQ	NA	NA	NA	NA	NA
WP_010930333.1|2634453_2635242_+	flagellar biosynthetic protein FliR	NA	NA	NA	NA	NA
WP_010929632.1|2635288_2636305_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_014486070.1|2636521_2637964_-	PAS domain-containing protein	NA	A0A1B0V854	Salmonella_phage	41.8	1.0e-35
WP_010930332.1|2638142_2639762_-	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	45.3	1.5e-08
WP_010930331.1|2639882_2641703_-	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	52.6	6.4e-11
WP_010930330.1|2641781_2643314_-	flagellar hook-associated protein FlgL	NA	NA	NA	NA	NA
WP_010930329.1|2643347_2644994_-	flagellar hook-associated protein FlgK	NA	NA	NA	NA	NA
WP_010930328.1|2645063_2646086_-	flagellar assembly peptidoglycan hydrolase FlgJ	NA	A0A088F6W1	Sulfitobacter_phage	31.4	1.9e-12
WP_010930327.1|2646103_2647237_-	flagellar basal body P-ring protein FlgI	NA	NA	NA	NA	NA
WP_010930326.1|2647239_2647929_-	flagellar basal body L-ring protein FlgH	NA	NA	NA	NA	NA
WP_010930325.1|2647928_2648714_-	flagellar basal-body rod protein FlgG	NA	NA	NA	NA	NA
WP_003817181.1|2648757_2649522_-	flagellar basal body rod protein FlgF	NA	NA	NA	NA	NA
WP_003817180.1|2649560_2650982_-	flagellar hook-basal body complex protein	NA	NA	NA	NA	NA
WP_010930324.1|2651047_2651752_-	flagellar basal body rod modification protein FlgD	NA	NA	NA	NA	NA
WP_003817176.1|2651799_2652219_-	flagellar basal body rod protein FlgC	NA	NA	NA	NA	NA
WP_010930323.1|2652231_2652639_-	flagellar basal body rod protein FlgB	NA	NA	NA	NA	NA
WP_010930322.1|2652822_2653533_+	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA	NA
WP_003817172.1|2653659_2653950_+	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA	NA
WP_003817170.1|2653967_2654450_+	flagellar protein FlgN	NA	NA	NA	NA	NA
WP_010930321.1|2658955_2660110_-	flagellar type III secretion system protein FlhB	NA	NA	NA	NA	NA
WP_010931363.1|2660415_2661432_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930319.1|2661678_2662467_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003812020.1|2662533_2663214_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812022.1|2663210_2663981_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.1	9.8e-30
WP_010930208.1|2664079_2665030_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811401.1|2665085_2666003_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
WP_003811400.1|2666013_2667192_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	NA	NA	NA	NA
WP_010930318.1|2667211_2668207_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811396.1|2669795_2670404_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_003811393.1|2670391_2671432_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_003811391.1|2671449_2672412_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811389.1|2672408_2673602_-	CoA transferase	NA	NA	NA	NA	NA
WP_010930317.1|2673598_2674396_-	citryl-CoA lyase	NA	NA	NA	NA	NA
WP_014486069.1|2674421_2675408_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930316.1|2675426_2677466_-	acetate--CoA ligase family protein	NA	NA	NA	NA	NA
WP_010930315.1|2677667_2678348_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930314.1|2678361_2679273_-	CoA ester lyase	NA	NA	NA	NA	NA
WP_003811381.1|2679269_2679848_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930313.1|2679986_2680892_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930312.1|2680899_2684319_+	TM0106 family RecB-like putative nuclease	NA	NA	NA	NA	NA
WP_010930311.1|2684306_2686907_-	BP1344/BB2830 family autotransporter	NA	NA	NA	NA	NA
WP_003811375.1|2687862_2688495_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003811372.1|2688888_2689647_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_003811370.1|2689643_2690846_+	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010930208.1|2691033_2691984_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930310.1|2692891_2694037_+	DUF3182 family protein	NA	NA	NA	NA	NA
WP_019247449.1|2694023_2694779_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_003811361.1|2694895_2695075_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930208.1|2695140_2696091_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
NZ_CP012132	Bordetella pertussis strain I187 chromosome, complete genome	4106507	2894430	2967755	4106507	protease,transposase,tRNA	Catovirus(22.22%)	53	NA	NA
WP_010930211.1|2894430_2895786_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003813618.1|2897264_2897987_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930207.1|2898041_2899025_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|2899154_2900105_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813621.1|2900101_2901004_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930206.1|2901091_2901850_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_023853245.1|2901862_2902954_-	cell division protein ZapE	NA	NA	NA	NA	NA
WP_003813626.1|2903051_2904479_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	2.1e-41
WP_010930204.1|2904708_2905923_-	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_003813631.1|2905968_2908839_-	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_010930202.1|2911249_2911738_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930201.1|2911863_2914560_+	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA	NA
WP_010930200.1|2914714_2916997_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_019248935.1|2917170_2917794_+	serotype 2 fimbrial subunit	NA	NA	NA	NA	NA
WP_010930198.1|2917892_2918843_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812405.1|2918889_2919444_-	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_003816844.1|2919511_2920357_-	PHP domain-containing protein	NA	NA	NA	NA	NA
WP_019248398.1|2920426_2921395_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_023995083.1|2921394_2922258_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010930196.1|2925090_2929017_-	inverse autotransporter beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_010930194.1|2929752_2932983_-	autotransporter SphB3	NA	NA	NA	NA	NA
WP_010928340.1|2933264_2934092_-	TatD family hydrolase	NA	NA	NA	NA	NA
WP_003812422.1|2934125_2934821_-	lipoprotein-releasing ABC transporter ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	38.6	7.0e-35
WP_019247537.1|2934813_2936094_-	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010930192.1|2936103_2937081_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930191.1|2937062_2938763_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.3	1.3e-50
WP_010926448.1|2938865_2939969_+	peptide chain release factor 2	NA	NA	NA	NA	NA
WP_010926447.1|2939999_2940755_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930190.1|2940761_2942282_+|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
WP_010930189.1|2942324_2942627_+	membrane protein	NA	NA	NA	NA	NA
WP_003812436.1|2942623_2943256_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930188.1|2943334_2945200_-	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
WP_020699602.1|2945196_2945991_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.3	1.2e-11
WP_010930186.1|2946019_2947135_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930185.1|2948039_2948918_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930184.1|2948917_2949742_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
WP_010929591.1|2949909_2950860_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930183.1|2951072_2953922_+	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010930182.1|2953903_2954632_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_019248549.1|2954772_2956236_-	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
WP_010930180.1|2956232_2956604_-	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
WP_003812701.1|2956621_2957935_+	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_003812703.1|2957971_2958430_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_155120815.1|2958384_2958525_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2958542_2959493_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930178.1|2959489_2960503_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_003812707.1|2960642_2961629_+	homoserine kinase	NA	NA	NA	NA	NA
WP_161633091.1|2961987_2962695_-	DUF192 domain-containing protein	NA	NA	NA	NA	NA
WP_010929591.1|2963275_2964226_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809618.1|2964377_2964980_-	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_010930175.1|2964998_2965631_+	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
WP_162096758.1|2965675_2965927_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930174.1|2965868_2967755_+|protease	ATP-dependent zinc metalloprotease FtsH	protease	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
>prophage 22
NZ_CP012132	Bordetella pertussis strain I187 chromosome, complete genome	4106507	2979480	3029200	4106507	tRNA,transposase,holin	uncultured_Mediterranean_phage(60.0%)	43	NA	NA
WP_005013747.1|2979480_2980431_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809441.1|2980457_2980922_-	barstar family protein	NA	NA	NA	NA	NA
WP_014486065.1|2982128_2984417_-	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_010930165.1|2984533_2985406_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930164.1|2985448_2986603_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_010930163.1|2986637_2987468_-	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_023853525.1|2987551_2989096_+	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
WP_010930161.1|2989138_2989498_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003819794.1|2989499_2989913_-|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_003809432.1|2989953_2990271_-	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003809431.1|2990355_2991072_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930160.1|2991335_2992757_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_005015810.1|2995429_2996380_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_161633096.1|2996359_2996614_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853536.1|2996952_2997969_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930157.1|2998304_2998946_-	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_003809423.1|2999036_3000473_-	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_023853534.1|3000630_3001704_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_010930155.1|3001700_3002837_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
WP_003809416.1|3002981_3003326_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.4	1.0e-10
WP_010930154.1|3003392_3005273_+	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_003809411.1|3005322_3006258_+	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.5	3.0e-41
WP_010931363.1|3006590_3007607_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_015041211.1|3008544_3009972_+|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010930151.1|3009968_3010991_+	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
WP_003809396.1|3010980_3011454_+	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_010930149.1|3011594_3012482_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_014486064.1|3012478_3014122_+	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_010930148.1|3014118_3015168_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_010931363.1|3015956_3016973_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003817162.1|3017072_3017705_-	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_003811911.1|3017713_3018103_-	chemotaxis response regulator CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
WP_010930146.1|3018155_3019208_-	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_023995045.1|3020071_3020836_-	Tar ligand binding domain-containing protein	NA	NA	NA	NA	NA
WP_003811919.1|3020909_3021410_-	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_010930144.1|3021424_3023482_-	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_019247393.1|3023508_3023802_-	response regulator	NA	NA	NA	NA	NA
WP_003817154.1|3023903_3024851_-	flagellar motor protein MotB	NA	NA	NA	NA	NA
WP_003811927.1|3024863_3025739_-	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
WP_003811929.1|3025859_3026420_-	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
WP_010930143.1|3026454_3026778_-	flagellar transcriptional regulator FlhD	NA	NA	NA	NA	NA
WP_003811933.1|3027213_3027951_+	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
WP_005012067.1|3028249_3029200_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NZ_CP012132	Bordetella pertussis strain I187 chromosome, complete genome	4106507	3037410	3099568	4106507	transposase	Erysipelothrix_phage(20.0%)	46	NA	NA
WP_023853531.1|3037410_3038544_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930137.1|3038647_3039289_+	glutathione transferase	NA	NA	NA	NA	NA
WP_010930136.1|3039443_3041792_+	DUF3141 domain-containing protein	NA	NA	NA	NA	NA
WP_003809454.1|3041788_3042727_+	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_010930135.1|3042752_3043943_+	acetate kinase	NA	NA	NA	NA	NA
WP_010930134.1|3043939_3044713_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010930133.1|3044742_3045936_-	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_010930132.1|3046053_3047064_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_010930131.1|3047081_3049118_-	transketolase	NA	NA	NA	NA	NA
WP_010930130.1|3049312_3050053_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_010929969.1|3050151_3051102_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929584.1|3051200_3052151_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003817151.1|3052193_3053369_+	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_010930129.1|3053590_3055381_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
WP_010930128.1|3055393_3057055_-	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
WP_010930127.1|3057067_3059773_-	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_003817147.1|3060065_3061820_+	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_010930126.1|3061816_3062443_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003811948.1|3062439_3063291_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
WP_019248379.1|3063366_3065481_+	M3 family metallopeptidase	NA	NA	NA	NA	NA
WP_010930124.1|3065667_3066282_+	SCO family protein	NA	NA	NA	NA	NA
WP_010930123.1|3066427_3066679_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_014486063.1|3066748_3068131_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010930121.1|3068127_3071307_-	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_077069988.1|3072114_3073035_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930119.1|3073086_3073818_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_010926548.1|3073877_3074450_+	chorismate lyase	NA	NA	NA	NA	NA
WP_010929632.1|3075958_3076975_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930118.1|3077112_3078162_-	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
WP_005012067.1|3078266_3079217_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813314.1|3079312_3080038_-	CoA pyrophosphatase	NA	NA	NA	NA	NA
WP_003813315.1|3080248_3080629_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_014905652.1|3080934_3081807_+	EamA family transporter	NA	NA	NA	NA	NA
WP_023852686.1|3081814_3082195_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023852693.1|3082348_3083623_-	PA0069 family radical SAM protein	NA	NA	NA	NA	NA
WP_010930113.1|3085110_3086019_-	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA	NA
WP_010930112.1|3086816_3087881_-	sulfate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.3	3.8e-24
WP_170954292.1|3089717_3090719_-	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003813333.1|3090941_3091583_-	peroxiredoxin	NA	NA	NA	NA	NA
WP_003821527.1|3091665_3093492_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010930111.1|3093735_3094665_-	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA	NA
WP_010930110.1|3094664_3095414_-	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
WP_003821521.1|3095485_3096400_-	histone deacetylase family protein	NA	A0A2K9KZC4	Tupanvirus	34.7	9.8e-45
WP_010930108.1|3096419_3097565_+	lytic murein transglycosylase B	NA	NA	NA	NA	NA
WP_014486062.1|3097625_3098537_-	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	38.8	8.0e-47
WP_005012067.1|3098617_3099568_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
NZ_CP012132	Bordetella pertussis strain I187 chromosome, complete genome	4106507	3118990	3174120	4106507	transposase	Bacillus_phage(28.57%)	48	NA	NA
WP_005012808.1|3118990_3119941_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566317.1|3120070_3120463_+	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
WP_003821497.1|3120739_3121651_-	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
WP_010930088.1|3121775_3122750_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|3122746_3123697_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810865.1|3123795_3124881_-	DNA polymerase IV	NA	NA	NA	NA	NA
WP_010930072.1|3124978_3125389_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003810859.1|3126004_3127918_+	S9 family peptidase	NA	NA	NA	NA	NA
WP_010930071.1|3128053_3130666_+	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_019248496.1|3130667_3131402_-	metallophosphoesterase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
WP_003810851.1|3131565_3132747_+	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_003810850.1|3132743_3132956_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930069.1|3132952_3133933_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_010930068.1|3133978_3134806_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
WP_023852913.1|3134955_3136770_+	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
WP_003810840.1|3136824_3137208_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_010930066.1|3137204_3138155_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810839.1|3138267_3138519_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|3139024_3140143_-	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810832.1|3140262_3140475_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930064.1|3140634_3140856_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3140908_3141859_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930062.1|3143035_3144406_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_010930061.1|3144438_3145230_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930060.1|3145242_3146298_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019247557.1|3146323_3147199_-	amidohydrolase	NA	NA	NA	NA	NA
WP_023852826.1|3147304_3147553_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003819989.1|3147587_3149042_-	carboxylase	NA	NA	NA	NA	NA
WP_004568140.1|3149038_3149560_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_010930057.1|3149588_3150941_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_029444137.1|3151164_3154053_-	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010930056.1|3156197_3157499_+	phospholipase A	NA	NA	NA	NA	NA
WP_010930055.1|3157513_3158230_-	flagellar brake protein	NA	NA	NA	NA	NA
WP_010930054.1|3158511_3159192_+	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_003809770.1|3159203_3159371_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023852837.1|3159479_3159626_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930052.1|3159719_3160379_-	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
WP_010930051.1|3160777_3162610_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
WP_005012067.1|3162606_3163557_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814007.1|3164720_3166436_+	acetolactate synthase 3 catalytic subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.3	3.1e-60
WP_003814006.1|3166446_3166938_+	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_010930015.1|3167010_3168027_+	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_003814004.1|3168194_3168974_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_003814003.1|3168992_3169520_-	lipoprotein	NA	NA	NA	NA	NA
WP_003814002.1|3169813_3170083_+	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_003821234.1|3170173_3172333_+	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_003814000.1|3172453_3173173_+	lipoprotein	NA	NA	NA	NA	NA
WP_005013747.1|3173169_3174120_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 25
NZ_CP012132	Bordetella pertussis strain I187 chromosome, complete genome	4106507	3255180	3328342	4106507	transposase	Klosneuvirus(16.67%)	57	NA	NA
WP_041337087.1|3255180_3256131_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813068.1|3256127_3257147_-	class 1 fructose-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	35.7	1.5e-49
WP_010930049.1|3257156_3259865_-	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	24.0	2.8e-15
WP_010930050.1|3260012_3260669_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|3260767_3261718_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023998705.1|3261865_3262759_+	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_010930013.1|3262958_3264653_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_010930012.1|3264687_3265614_+	VOC family protein	NA	NA	NA	NA	NA
WP_010930011.1|3265682_3266780_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003818996.1|3266798_3267662_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.9	9.6e-34
WP_010930010.1|3267673_3268456_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_004566042.1|3268452_3269571_+	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
WP_010930009.1|3269567_3271100_+	acyl--CoA ligase	NA	NA	NA	NA	NA
WP_003818991.1|3271140_3272148_+	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_023999677.1|3272292_3273015_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930007.1|3273030_3274053_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_010930006.1|3274369_3275104_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930005.1|3275188_3276934_+	acetolactate synthase	NA	NA	NA	NA	NA
WP_010930004.1|3276930_3277683_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930003.1|3277727_3278684_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003818983.1|3278772_3279339_+	membrane protein	NA	NA	NA	NA	NA
WP_010930002.1|3279346_3280207_-	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_020699739.1|3280236_3280965_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.4	3.4e-32
WP_003807497.1|3280996_3281680_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010930000.1|3282517_3283432_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929999.1|3283496_3284405_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929998.1|3284495_3285920_-	TolC family protein	NA	NA	NA	NA	NA
WP_010929997.1|3285921_3287244_-	cyclolysin T1SS periplasmic adaptor subunit CyaD	NA	NA	NA	NA	NA
WP_010929996.1|3287240_3289379_-	cyclolysin T1SS permease/ATPase CyaB	NA	W8CYL7	Bacillus_phage	29.2	2.7e-45
WP_010929995.1|3289456_3294577_-	bifunctional adenylate cyclase toxin/hemolysin CyaA	NA	NA	NA	NA	NA
WP_153302771.1|3294677_3294986_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929994.1|3295055_3295613_+	cyclolysin-activating lysine-acyltransferase	NA	NA	NA	NA	NA
WP_010929993.1|3295628_3297110_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010929992.1|3299280_3300618_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_010929991.1|3300652_3302650_-	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010929990.1|3302667_3304716_-	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010929989.1|3304846_3305713_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929988.1|3305981_3306947_-	octaprenyl diphosphate synthase	NA	NA	NA	NA	NA
WP_010929987.1|3307061_3308210_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_003807462.1|3308634_3308946_+	50S ribosomal protein L21	NA	NA	NA	NA	NA
WP_003807460.1|3308979_3309240_+	50S ribosomal protein L27	NA	NA	NA	NA	NA
WP_003807459.1|3309389_3310523_+	GTPase ObgE	NA	NA	NA	NA	NA
WP_003807457.1|3310593_3311730_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	44.8	5.8e-63
WP_010925762.1|3311895_3312690_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003807452.1|3312752_3313196_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|3313311_3314262_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929985.1|3314363_3314792_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929984.1|3314864_3317060_+	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|3317281_3318232_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852739.1|3318191_3318716_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_003814467.1|3318847_3319819_+	FecR family protein	NA	NA	NA	NA	NA
WP_010929983.1|3319938_3322383_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_010929982.1|3322398_3322989_-	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|3323232_3324183_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814462.1|3324340_3325606_-	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003814461.1|3325639_3326737_-	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_005013747.1|3327391_3328342_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
NZ_CP012132	Bordetella pertussis strain I187 chromosome, complete genome	4106507	3339629	3439742	4106507	tail,transposase,terminase,protease,tRNA	uncultured_Caudovirales_phage(14.29%)	108	NA	NA
WP_005012067.1|3339629_3340580_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814437.1|3341311_3341689_+	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_003814436.1|3341673_3342375_-	membrane protein	NA	NA	NA	NA	NA
WP_010931409.1|3342518_3343211_-	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_010931410.1|3343210_3344314_-	phosphotransferase	NA	NA	NA	NA	NA
WP_010931411.1|3344423_3346796_+	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931412.1|3346792_3348352_+	chaperone SurA	NA	NA	NA	NA	NA
WP_010931413.1|3348376_3349174_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931414.1|3349205_3350351_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_003814419.1|3350455_3351898_+	pyruvate kinase	NA	NA	NA	NA	NA
WP_010929184.1|3351900_3353130_-	spore maturation protein	NA	NA	NA	NA	NA
WP_005012808.1|3355267_3356218_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247922.1|3357347_3357905_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247923.1|3357880_3358231_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814657.1|3358399_3359194_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
WP_010931416.1|3359190_3360240_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003814652.1|3360239_3360929_-	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_003814650.1|3361015_3361513_-	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_010931417.1|3361544_3362861_-	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_010931418.1|3362877_3363852_-	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_003814643.1|3363888_3364347_-	protein TolR	NA	NA	NA	NA	NA
WP_003814641.1|3364346_3365027_-	protein TolQ	NA	NA	NA	NA	NA
WP_010931419.1|3365029_3365458_-	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814636.1|3365510_3367241_-|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
WP_003814635.1|3367306_3367879_+	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_010931420.1|3367859_3368546_+	response regulator	NA	NA	NA	NA	NA
WP_010931421.1|3368901_3369573_+	SOS response-associated peptidase	NA	Q5QF62	Pseudomonas_virus	39.9	4.7e-36
WP_010931422.1|3369901_3370123_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010926433.1|3370122_3370404_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931423.1|3370400_3370916_-	DUF2514 family protein	NA	NA	NA	NA	NA
WP_010931424.1|3370915_3371467_-	lysozyme	NA	NA	NA	NA	NA
WP_010931425.1|3371445_3371688_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931426.1|3371692_3372505_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926428.1|3372504_3372768_-	hypothetical protein	NA	NA	NA	NA	NA
WP_124740660.1|3372808_3373006_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931428.1|3372986_3373403_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931429.1|3373407_3377364_-	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
WP_010931430.1|3377356_3377746_-	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931431.1|3377742_3378276_-	DUF1833 family protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931432.1|3378343_3378703_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931433.1|3378712_3381325_-|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931434.1|3381350_3381641_-	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_003813412.1|3381658_3381988_-|tail	phage tail assembly chaperone	tail	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931435.1|3381997_3382516_-|tail	phage tail protein	tail	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_010931436.1|3382770_3383271_-	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931437.1|3383278_3383701_-	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_010931438.1|3383697_3384096_-	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931439.1|3384092_3384488_-	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_010931440.1|3384487_3384688_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|3384689_3385172_-	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_010931442.1|3385234_3385486_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|3386160_3387111_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931443.1|3387539_3388142_-	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_010931444.1|3388264_3388507_-	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931445.1|3388512_3389568_-	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931446.1|3389596_3391015_-	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931447.1|3391017_3392295_-|terminase	terminase large subunit	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_019247942.1|3392281_3392767_-|transposase	transposase	transposase	C7U0W1	Enterobacteria_phage	61.5	7.3e-39
WP_005012067.1|3393406_3394357_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853183.1|3394374_3394596_+	hypothetical protein	NA	NA	NA	NA	NA
WP_161633094.1|3394613_3395303_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853179.1|3395295_3395547_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931451.1|3396101_3396713_+	S24 family peptidase	NA	NA	NA	NA	NA
WP_019247378.1|3396784_3396991_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3397242_3398193_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248926.1|3398291_3399365_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931475.1|3399532_3400327_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010925795.1|3400366_3400891_-	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931474.1|3400883_3402626_-	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010931473.1|3402835_3403594_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931472.1|3403596_3404304_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931471.1|3404320_3405202_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_019247734.1|3405212_3405971_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_019248554.1|3405939_3406695_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931468.1|3406764_3408183_+	amidase	NA	NA	NA	NA	NA
WP_003819076.1|3408204_3408855_-	carbonic anhydrase	NA	NA	NA	NA	NA
WP_033446132.1|3408988_3409324_-	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_010930800.1|3409412_3410363_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931467.1|3410439_3412260_+	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_010931466.1|3412264_3413338_-	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_003814230.1|3413460_3414429_+	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010927008.1|3414502_3415414_+	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814226.1|3415432_3416005_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010931465.1|3416085_3416634_-	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_010931464.1|3416633_3418223_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_003814221.1|3418292_3418532_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_023995141.1|3418572_3419598_-|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814217.1|3419663_3420845_-	UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase	NA	NA	NA	NA	NA
WP_010931463.1|3420941_3421394_+	membrane protein	NA	NA	NA	NA	NA
WP_010931462.1|3421403_3422744_-	aminopeptidase P N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010931461.1|3423060_3424098_+	sodium:calcium antiporter	NA	NA	NA	NA	NA
WP_003814209.1|3424479_3424839_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041166340.1|3424922_3425864_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879617.1|3425938_3426889_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814206.1|3427182_3428277_+	porin	NA	NA	NA	NA	NA
WP_003814205.1|3428358_3429240_+	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814203.1|3429261_3430101_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_010931459.1|3430176_3431694_+|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_010931458.1|3431790_3432891_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931457.1|3432907_3433330_-	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_003814195.1|3433352_3433565_-	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931456.1|3433611_3434532_-	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_010931455.1|3434714_3435464_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_003814188.1|3435466_3435796_+	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_010931454.1|3436002_3437436_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	1.5e-52
WP_003814185.1|3437447_3437831_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_010931453.1|3437892_3438693_+	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_005015810.1|3438791_3439742_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 27
NZ_CP012132	Bordetella pertussis strain I187 chromosome, complete genome	4106507	3600411	3655385	4106507	transposase	Lake_Baikal_phage(20.0%)	44	NA	NA
WP_005012067.1|3600411_3601362_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929827.1|3601478_3602546_+	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_019247670.1|3602621_3605750_-	Rne/Rng family ribonuclease	NA	NA	NA	NA	NA
WP_023853155.1|3606257_3607223_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_010929830.1|3607225_3607897_+	HAD family hydrolase	NA	NA	NA	NA	NA
WP_010929831.1|3608053_3609013_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA	NA
WP_003821340.1|3609020_3609683_+	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA	NA
WP_005013747.1|3609679_3610630_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929806.1|3610751_3612005_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929805.1|3611982_3612945_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929804.1|3613076_3613571_+	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_010929803.1|3613570_3614803_+	CoA transferase	NA	NA	NA	NA	NA
WP_019247316.1|3615548_3615830_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929802.1|3615816_3616803_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929801.1|3616946_3617351_+	RidA family protein	NA	NA	NA	NA	NA
WP_010929800.1|3617492_3620879_+	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010929799.1|3620909_3622373_+	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_019248869.1|3622393_3624010_+	L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010929797.1|3624095_3624755_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929796.1|3624784_3625225_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929795.1|3625735_3625939_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	58.2	5.8e-14
WP_010929794.1|3626114_3627020_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929577.1|3627118_3628069_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|3628167_3629118_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814674.1|3630899_3632093_-	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_010929793.1|3632158_3633187_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_019247419.1|3633213_3634386_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003814681.1|3634511_3635489_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814685.1|3635499_3636471_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929791.1|3636537_3637323_-	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_003814691.1|3637315_3638548_-	CoA transferase	NA	NA	NA	NA	NA
WP_003814694.1|3638743_3639499_-	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	40.8	2.9e-42
WP_010929789.1|3639609_3640128_+	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	38.9	2.1e-12
WP_010929788.1|3641916_3643317_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_003820700.1|3643416_3643761_+	TIGR01244 family phosphatase	NA	NA	NA	NA	NA
WP_003814701.1|3643849_3644320_+	universal stress protein	NA	NA	NA	NA	NA
WP_019247421.1|3644730_3645129_+	GTP-binding protein	NA	E4ZFJ7	Streptococcus_phage	44.3	9.0e-19
WP_010929577.1|3645260_3646211_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814730.1|3648655_3649390_+	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
WP_003814728.1|3649799_3649979_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814726.1|3650169_3651483_+	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929786.1|3651498_3653010_-	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010929785.1|3653006_3654212_-	sodium/glutamate symporter	NA	NA	NA	NA	NA
WP_022997984.1|3654407_3655385_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 28
NZ_CP012132	Bordetella pertussis strain I187 chromosome, complete genome	4106507	3745198	3799393	4106507	protease,transposase	Paramecium_bursaria_Chlorella_virus(14.29%)	54	NA	NA
WP_005013747.1|3745198_3746149_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814960.1|3746271_3747000_+	monofunctional biosynthetic peptidoglycan transglycosylase	NA	NA	NA	NA	NA
WP_010929739.1|3747096_3748275_+	LPS export ABC transporter permease LptG	NA	NA	NA	NA	NA
WP_010929738.1|3748271_3749105_+	symmetrical bis(5'-nucleosyl)-tetraphosphatase	NA	NA	NA	NA	NA
WP_010929737.1|3749141_3749882_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929736.1|3750001_3751177_-	dihydroorotase	NA	NA	NA	NA	NA
WP_003820560.1|3751173_3752127_-	aspartate carbamoyltransferase catalytic subunit	NA	A7RB08	Paramecium_bursaria_Chlorella_virus	35.8	2.5e-30
WP_010929735.1|3752140_3752542_-	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_010927118.1|3752534_3753140_-	YqgE/AlgH family protein	NA	NA	NA	NA	NA
WP_003814980.1|3753227_3753392_-	rubredoxin	NA	NA	NA	NA	NA
WP_010929734.1|3753508_3754357_+	hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_003814984.1|3754353_3755007_+	thiamine phosphate synthase	NA	NA	NA	NA	NA
WP_010929733.1|3755023_3756307_+	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA	NA
WP_010929732.1|3756546_3758172_+	DUF342 domain-containing protein	NA	NA	NA	NA	NA
WP_003814990.1|3758265_3758667_-	RidA family protein	NA	NA	NA	NA	NA
WP_003814993.1|3758691_3759126_-	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814996.1|3759127_3760777_-	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	31.2	2.6e-56
WP_010929731.1|3760817_3761987_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929730.1|3761989_3762853_-	enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_010929729.1|3766216_3766921_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.2	1.1e-16
WP_003815010.1|3766914_3767709_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	23.5	2.6e-09
WP_003815011.1|3767705_3768671_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815013.1|3768674_3769595_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815015.1|3769691_3770855_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929728.1|3771077_3771968_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003815019.1|3771971_3772475_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929727.1|3772517_3773516_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930048.1|3773512_3774463_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_111735998.1|3774551_3774839_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|3775030_3775981_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566083.1|3776040_3776601_+	5'-3'-deoxyribonucleotidase	NA	A0A1E1EUN3	Acanthamoeba_castellanii_mimivirus	30.8	3.2e-14
WP_004566082.1|3778103_3778985_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929725.1|3779098_3780301_+	MFS transporter	NA	NA	NA	NA	NA
WP_003819105.1|3780429_3782289_-	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
WP_003819104.1|3782366_3783176_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010929724.1|3783246_3784248_+	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_003807710.1|3784279_3785140_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010929723.1|3785339_3786344_+	alpha/beta hydrolase	NA	A0A2L2DMU8	Acanthamoeba_polyphaga_mimivirus	31.5	7.5e-30
WP_003819100.1|3786340_3787927_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003807706.1|3787935_3788862_+	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA	NA
WP_003807705.1|3788884_3789511_+	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_005015810.1|3789609_3790560_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014906092.1|3790556_3791693_-	trypsin-like peptidase domain-containing protein	NA	W5SAB9	Pithovirus	31.2	1.2e-07
WP_010927226.1|3791746_3792523_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_010929721.1|3792547_3793006_-	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_003815815.1|3793145_3793787_+	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_003815816.1|3793851_3795234_+	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_019247426.1|3795253_3796108_+	cytochrome c1	NA	NA	NA	NA	NA
WP_003815819.1|3796266_3796878_+	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_003815821.1|3796887_3797337_+|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
WP_010929719.1|3797855_3797996_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929718.1|3798003_3798165_-	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_193394812.1|3798278_3798425_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3798442_3799393_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 29
NZ_CP012132	Bordetella pertussis strain I187 chromosome, complete genome	4106507	3810009	3870898	4106507	protease,transposase,tRNA	uncultured_Caudovirales_phage(33.33%)	51	NA	NA
WP_010929591.1|3810009_3810960_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929711.1|3811690_3812671_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929710.1|3812684_3813809_+	CoA transferase	NA	NA	NA	NA	NA
WP_003814321.1|3813816_3815571_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_010929709.1|3815677_3816577_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814324.1|3816641_3817625_-	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
WP_010929708.1|3817760_3818741_+	AEC family transporter	NA	NA	NA	NA	NA
WP_010929707.1|3818757_3820149_-	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_010929706.1|3820300_3820837_+|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_019247543.1|3820767_3822153_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
WP_003814332.1|3822295_3822934_-	VTT domain-containing protein	NA	NA	NA	NA	NA
WP_010929705.1|3823020_3824910_+	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
WP_003814337.1|3824906_3825848_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_003814339.1|3825953_3827003_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
WP_010929704.1|3827255_3827957_+	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_010929703.1|3827953_3828652_+	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_010929702.1|3828652_3830008_+	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
WP_010929701.1|3830004_3830496_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_003814351.1|3830514_3831471_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003814355.1|3832881_3834984_-	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_003814356.1|3835154_3836198_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814358.1|3836241_3836985_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814363.1|3838006_3838417_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_010929700.1|3839366_3840164_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930742.1|3840262_3841213_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|3841209_3842160_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|3842246_3843197_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929681.1|3843311_3844313_-	HindIII family type II restriction endonuclease	NA	NA	NA	NA	NA
WP_010929682.1|3844403_3844970_-	preprotein translocase subunit SecD	NA	NA	NA	NA	NA
WP_010929683.1|3845288_3847202_+	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA	NA
WP_010929684.1|3847243_3848674_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_019247308.1|3848786_3850199_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_003818947.1|3850215_3850911_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|3851129_3852080_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929687.1|3852104_3853004_-	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_010929688.1|3853158_3853707_+	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929689.1|3853745_3854465_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_010929690.1|3854536_3857479_+	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_033455792.1|3858072_3860868_+|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
WP_010929692.1|3861325_3862258_+	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929693.1|3862369_3863719_+	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929694.1|3863750_3864476_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929695.1|3864526_3865378_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929696.1|3865507_3866194_+	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_003819086.1|3866193_3866838_+	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_003807674.1|3866894_3867170_+	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
WP_003807672.1|3867195_3867492_+	YciI family protein	NA	NA	NA	NA	NA
WP_010929697.1|3867537_3868317_+	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
WP_023853200.1|3868322_3869363_+	cyclase family protein	NA	NA	NA	NA	NA
WP_010929699.1|3869467_3869791_-	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
WP_010931070.1|3869947_3870898_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 30
NZ_CP012132	Bordetella pertussis strain I187 chromosome, complete genome	4106507	4028678	4082110	4106507	transposase	Planktothrix_phage(40.0%)	46	NA	NA
WP_010931661.1|4028678_4029629_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931662.1|4029798_4031025_+	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA	NA	NA	NA	NA
WP_010931663.1|4031224_4032091_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_003815027.1|4032083_4033046_+	Nudix family hydrolase	NA	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	53.4	1.9e-06
WP_010927663.1|4033146_4034097_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|4034195_4035146_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|4035244_4036195_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994937.1|4036191_4037685_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_003815032.1|4037681_4040789_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931665.1|4040785_4043854_-	MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931666.1|4043850_4045101_-	MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_003815038.1|4045281_4046043_-	cell division protein ZapD	NA	NA	NA	NA	NA
WP_019247320.1|4046075_4046726_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_003820519.1|4046728_4047568_-	prepilin peptidase	NA	NA	NA	NA	NA
WP_003815047.1|4047808_4048552_+	copper resistance protein NlpE N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_003815049.1|4048634_4048982_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003815051.1|4049079_4049922_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_003815053.1|4049966_4050854_-	segregation/condensation protein A	NA	NA	NA	NA	NA
WP_003815055.1|4050880_4051069_-	DUF3460 family protein	NA	NA	NA	NA	NA
WP_010931669.1|4051166_4052624_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_010931670.1|4052610_4054137_+	glycerol kinase GlpK	NA	NA	NA	NA	NA
WP_003815061.1|4054155_4054623_-	CopD family protein	NA	NA	NA	NA	NA
WP_010931671.1|4054622_4055645_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_169507388.1|4055765_4056485_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.9	4.7e-34
WP_003815066.1|4056560_4057661_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815068.1|4057662_4058853_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815070.1|4058972_4059989_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	42.1	1.0e-71
WP_003815073.1|4060307_4060979_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	38.2	9.5e-29
WP_010927126.1|4060975_4061884_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_010931672.1|4062095_4062743_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA	NA
WP_010931673.1|4066594_4067671_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
WP_003815084.1|4067681_4068491_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815086.1|4068580_4069354_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_023853189.1|4069354_4069519_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930363.1|4069536_4070487_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077274100.1|4070375_4071398_+	CoA transferase	NA	NA	NA	NA	NA
WP_010931674.1|4071387_4072542_+	CoA transferase	NA	NA	NA	NA	NA
WP_010931675.1|4072581_4073994_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_019247370.1|4074118_4074985_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931677.1|4074986_4075811_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_023853488.1|4075807_4076569_+	nitroreductase	NA	M1I6Q5	Acanthocystis_turfacea_Chlorella_virus	31.0	2.0e-19
WP_003808010.1|4076649_4077336_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931679.1|4077509_4078517_+	hydroxymethylglutaryl-CoA lyase	NA	NA	NA	NA	NA
WP_003819309.1|4078513_4079293_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931680.1|4079350_4080613_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929591.1|4081159_4082110_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
