The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP019563	Staphylococcus aureus strain SR434 chromosome, complete genome	2809136	33	94451	2809136	tail,coat,holin,integrase,protease,terminase,capsid,portal,head	Staphylococcus_phage(89.66%)	118	21006:21023	44552:44569
WP_077156029.1|33_903_+	primase C-terminal domain-containing protein	NA	A0A1W6JQL5	Staphylococcus_phage	95.2	5.1e-160
WP_077156030.1|919_2389_+	virulence-associated protein E	NA	A0A1W6JQD6	Staphylococcus_phage	99.0	8.4e-288
WP_077156031.1|2674_3037_+	pathogenicity island protein	NA	A0A1W6JQD5	Staphylococcus_phage	96.7	1.9e-63
WP_077156032.1|3038_3323_+	pathogenicity island protein	NA	A0A1W6JQE4	Staphylococcus_phage	95.7	1.1e-47
WP_077156033.1|3319_3961_+	pathogenicity island protein	NA	Q4ZE67	Staphylococcus_phage	88.7	1.2e-105
WP_001288441.1|4528_4873_+	hypothetical protein	NA	A0A1W6JQF3	Staphylococcus_phage	100.0	1.4e-57
WP_000856045.1|4907_5486_+	hypothetical protein	NA	A0A1W6JQG0	Staphylococcus_phage	99.5	3.5e-80
WP_001160678.1|5485_5662_+	hypothetical protein	NA	A0A1W6JQJ5	Staphylococcus_phage	100.0	7.7e-23
WP_077156034.1|5714_6242_+|coat	spore coat protein	coat	A0A1W6JQH7	Staphylococcus_phage	97.1	1.3e-86
WP_000358778.1|6244_6586_+	hypothetical protein	NA	A0A1W6JQM3	Staphylococcus_phage	100.0	1.7e-58
WP_001293088.1|6582_7152_+|terminase	terminase small subunit	terminase	Q4ZE85	Staphylococcus_phage	97.4	7.9e-101
WP_001035599.1|7306_8011_-	toxic shock syndrome toxin TSST-1	NA	NA	NA	NA	NA
WP_001035616.1|8888_9449_-	DUF4888 domain-containing protein	NA	Q4ZBG8	Staphylococcus_virus	68.1	5.4e-62
WP_077156035.1|10236_11037_+	staphylococcal enterotoxin type C3	NA	A0A097PAT7	Streptococcus_pyogenes_phage	45.0	1.4e-50
WP_000746599.1|11205_11928_-	staphylococcal enterotoxin type L	NA	A0A1X9H080	Staphylococcus_phage	34.9	2.1e-26
WP_001045345.1|12955_14263_-	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000278575.1|14778_15981_+	5-aminolevulinate synthase	NA	D2TEZ5	Emiliania_huxleyi_virus	27.6	8.4e-36
WP_001108473.1|15983_16853_+	DMT family transporter	NA	NA	NA	NA	NA
WP_000206630.1|17350_18574_-	ArgE/DapE family deacylase	NA	NA	NA	NA	NA
WP_000791415.1|19009_20062_+	bi-component leukocidin LukGH subunit H	NA	A0A2I6PER8	Staphylococcus_phage	32.1	1.3e-35
WP_000595401.1|20083_21100_+	bi-component leukocidin LukGH subunit G	NA	A0A2I6PER8	Staphylococcus_phage	29.3	2.3e-26
21006:21023	attL	AAAAAGAAGAAAAATTAT	NA	NA	NA	NA
WP_000857185.1|22218_23256_-|integrase	site-specific integrase	integrase	Q38086	Staphylococcus_phage	100.0	4.5e-179
WP_001549185.1|23447_24161_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A1X9H026	Staphylococcus_phage	100.0	5.0e-129
WP_000705240.1|24238_24421_-	hypothetical protein	NA	A0A2I6PDR4	Staphylococcus_phage	100.0	5.3e-27
WP_000109192.1|24620_24806_-	hypothetical protein	NA	A0A1X9H0K5	Staphylococcus_phage	98.4	1.9e-24
WP_001049401.1|24802_24949_-	hypothetical protein	NA	U5U441	Staphylococcus_phage	100.0	4.3e-19
WP_000094093.1|24960_25668_-	helix-turn-helix transcriptional regulator	NA	G4KNM8	Staphylococcus_phage	100.0	7.7e-130
WP_000548576.1|25838_26078_+	helix-turn-helix transcriptional regulator	NA	Q9MBT3	Staphylococcus_prophage	100.0	8.0e-39
WP_000435341.1|26090_26351_+	transcriptional regulator	NA	A7TW91	Staphylococcus_phage	100.0	2.7e-40
WP_000351243.1|26374_26914_-	hypothetical protein	NA	A7TW92	Staphylococcus_phage	100.0	1.7e-97
WP_001148343.1|26970_27726_+	phage antirepressor KilAC domain-containing protein	NA	A0A1P8L6G2	Staphylococcus_phage	99.6	4.3e-139
WP_001148861.1|27741_27939_+	hypothetical protein	NA	A0A1W6JPV3	Staphylococcus_phage	100.0	1.2e-24
WP_000939496.1|27969_28110_+	hypothetical protein	NA	A0A2I6PDG0	Staphylococcus_phage	100.0	1.9e-16
WP_000275058.1|28124_28757_-	hypothetical protein	NA	A7TW95	Staphylococcus_phage	100.0	1.5e-113
WP_001120197.1|28815_29136_+	DUF771 domain-containing protein	NA	A0A2I6PDH6	Staphylococcus_phage	100.0	1.5e-56
WP_000066020.1|29132_29294_+	DUF1270 domain-containing protein	NA	A0A2I6PDF7	Staphylococcus_phage	100.0	1.9e-20
WP_000291488.1|29386_29647_+	DUF1108 family protein	NA	A0A2I6PDH1	Staphylococcus_phage	100.0	2.6e-43
WP_001205732.1|29655_29919_+	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
WP_031865195.1|29927_31871_+	AAA family ATPase	NA	A0A2I6PDH3	Staphylococcus_phage	97.8	0.0e+00
WP_000138473.1|31872_32793_+	recombinase RecT	NA	A0A2I6PDH5	Staphylococcus_phage	99.0	7.3e-165
WP_072519237.1|32858_33491_+	MBL fold metallo-hydrolase	NA	S4SWA4	Staphylococcus_phage	100.0	9.4e-87
WP_000934760.1|33491_33962_+	single-stranded DNA-binding protein	NA	A0EWX3	Staphylococcus_phage	99.4	7.4e-81
WP_031865196.1|33991_34885_+	DnaD domain-containing protein	NA	A0A2I6PDG7	Staphylococcus_phage	99.3	2.5e-141
WP_000338530.1|34891_35110_+	hypothetical protein	NA	A0A2I6PDG4	Staphylococcus_phage	100.0	1.0e-37
WP_000401958.1|35118_35523_+	RusA family crossover junction endodeoxyribonuclease	NA	A0EWX6	Staphylococcus_phage	99.3	3.2e-72
WP_000101275.1|35535_35904_+	hypothetical protein	NA	I1W656	Staphylococcus_phage	100.0	6.3e-51
WP_031865197.1|35907_36150_+	phage protein	NA	A0A2I6PDM0	Staphylococcus_phage	93.8	8.1e-39
WP_001065085.1|36164_36413_+	DUF1024 family protein	NA	A0A0E3XC66	Staphylococcus_phage	98.8	1.2e-37
WP_001668923.1|36405_36939_+	dUTP diphosphatase	NA	A0A059T5A7	Staphylococcus_phage	100.0	1.6e-95
WP_000195823.1|36975_37164_+	DUF1381 domain-containing protein	NA	A0EWR9	Staphylococcus_virus	100.0	1.8e-25
WP_001125015.1|37138_37339_+	hypothetical protein	NA	A0A2I6PF22	Staphylococcus_phage	100.0	1.8e-28
WP_000237868.1|37341_37491_+	transcriptional activator RinB	NA	A0A2I6PDY4	Staphylococcus_phage	98.0	1.1e-17
WP_000265043.1|37490_37691_+	DUF1514 family protein	NA	A0A2I6PDV9	Staphylococcus_phage	100.0	1.4e-28
WP_000590122.1|37718_38135_+	hypothetical protein	NA	G4KNP7	Staphylococcus_phage	100.0	1.3e-76
WP_000988332.1|38366_38666_+	HNH endonuclease	NA	A0A2I6PDH9	Staphylococcus_phage	100.0	3.5e-52
WP_000402904.1|38795_39140_+	hypothetical protein	NA	G4KNP9	Staphylococcus_phage	100.0	9.4e-57
WP_000625088.1|39136_40798_+|terminase	terminase large subunit	terminase	A0A2I6PDJ8	Staphylococcus_phage	100.0	0.0e+00
WP_031902643.1|40813_42001_+|portal	phage portal protein	portal	A0A2I6PDI1	Staphylococcus_phage	99.7	1.3e-219
WP_000642728.1|41984_42722_+|protease	Clp protease ClpP	protease	G4KNQ2	Staphylococcus_phage	100.0	1.8e-129
WP_000154559.1|42745_43891_+|capsid	phage major capsid protein	capsid	G4KNQ3	Staphylococcus_phage	100.0	9.6e-215
WP_000238237.1|43910_44171_+	hypothetical protein	NA	A0A0H3U504	Staphylococcus_phage	100.0	6.4e-42
WP_000150936.1|44183_44468_+|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
WP_000755150.1|44451_44814_+|head,tail	head-tail adaptor protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
44552:44569	attR	AAAAAGAAGAAAAATTAT	NA	NA	NA	NA
WP_000114226.1|44810_45215_+	HK97 gp10 family phage protein	NA	G4KNQ5	Staphylococcus_phage	100.0	4.3e-69
WP_000565498.1|45211_45619_+	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
WP_000268740.1|45619_46264_+|tail	phage tail protein	tail	G4KNQ7	Staphylococcus_phage	100.0	6.5e-120
WP_071621395.1|46305_46530_+	Ig-like domain-containing protein	NA	A0A075LYE8	Staphylococcus_phage	100.0	3.0e-32
WP_001096355.1|46579_46930_+	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
WP_001549167.1|46980_47118_+	hypothetical protein	NA	A0A2I6PDX7	Staphylococcus_phage	100.0	3.4e-18
WP_072519234.1|47174_51707_+|tail	phage tail tape measure protein	tail	W5R8I2	Staphylococcus_phage	94.6	0.0e+00
WP_000567390.1|51703_53188_+|tail	phage tail family protein	tail	A0A068A242	Staphylococcus_phage	100.0	1.5e-297
WP_031865200.1|53203_56986_+	phage minor structural protein	NA	A0A1V0E5H3	Staphylococcus_phage	99.4	0.0e+00
WP_001000058.1|56978_57131_+	hypothetical protein	NA	A0A1W6JPL6	Staphylococcus_phage	100.0	7.6e-19
WP_031865201.1|57176_57464_+	hypothetical protein	NA	A0A1X9H0N7	Staphylococcus_phage	98.9	2.9e-43
WP_000340977.1|57519_57894_+	hypothetical protein	NA	G4KNR3	Staphylococcus_phage	100.0	3.3e-39
WP_025174055.1|58309_59083_+	staphylococcal enterotoxin type P	NA	A0A075M4C7	Staphylococcus_phage	99.6	4.0e-148
WP_011447039.1|59285_59462_+|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	98.3	2.2e-22
WP_031762631.1|59514_59622_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000611512.1|59673_59928_+|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_000861026.1|59939_60695_+	CHAP domain-containing protein	NA	A0A075LZV3	Staphylococcus_phage	100.0	1.2e-152
WP_000920042.1|60885_61377_+	staphylokinase	NA	A0A075LYD3	Staphylococcus_phage	100.0	8.0e-86
WP_000727645.1|62456_62906_-	chemotaxis-inhibiting protein CHIPS	NA	A0A075LZI2	Staphylococcus_phage	100.0	8.7e-79
WP_000702262.1|63588_63939_+	complement inhibitor SCIN-A	NA	A7TWS0	Staphylococcus_phage	100.0	7.5e-54
WP_001791826.1|63991_64252_-	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000669789.1|64562_64742_-	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	100.0	2.2e-25
WP_070044004.1|65699_67133_+	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_001792929.1|67143_67434_+	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_001068523.1|67757_69044_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_000990056.1|69244_69343_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000681968.1|69585_69762_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000691587.1|70020_70401_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000991304.1|70397_71294_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	1.1e-16
WP_000645724.1|71294_71975_+	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
WP_000763051.1|71971_72844_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	35.2	2.1e-28
WP_001221651.1|72843_73584_+	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA	NA
WP_000182842.1|73649_74213_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_000966288.1|74333_74858_+	membrane protein	NA	NA	NA	NA	NA
WP_001033971.1|74917_75475_+	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_000713072.1|75471_76314_+	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_001188077.1|76370_77411_-	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_000267034.1|77861_78035_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000205106.1|78667_79069_-	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	42.9	6.0e-23
WP_000181322.1|79338_80367_+	lactonase family protein	NA	NA	NA	NA	NA
WP_001021226.1|80486_81866_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_072398251.1|81917_82091_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001140871.1|82283_83213_-	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA	NA
WP_000149686.1|83265_83826_-	cysteine hydrolase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
WP_000275705.1|84197_85295_+	pectate lyase	NA	U5PWM6	Bacillus_phage	34.6	3.3e-47
WP_000323154.1|85499_87062_+	SLC13 family permease	NA	NA	NA	NA	NA
WP_001802312.1|87072_87180_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001177827.1|87251_88046_-	prephenate dehydratase	NA	NA	NA	NA	NA
WP_000897643.1|88065_89142_-	nitric oxide synthase oxygenase	NA	NA	NA	NA	NA
WP_000284424.1|89325_90795_+	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	44.9	1.0e-107
WP_000040866.1|90787_91609_+	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.7	2.3e-69
WP_000011542.1|91879_92482_+	DUF2179 domain-containing protein	NA	NA	NA	NA	NA
WP_000669864.1|92462_92636_+	NETI motif-containing protein	NA	NA	NA	NA	NA
WP_000434933.1|92927_93254_-	staphostatin A	NA	NA	NA	NA	NA
WP_000827764.1|93284_94451_-|protease	cysteine protease staphopain A	protease	NA	NA	NA	NA
>prophage 2
NZ_CP019563	Staphylococcus aureus strain SR434 chromosome, complete genome	2809136	158401	203862	2809136	tRNA,protease	Staphylococcus_phage(93.33%)	44	NA	NA
WP_000379980.1|158401_159529_+|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
WP_000181392.1|159533_160004_+|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	tRNA	NA	NA	NA	NA
WP_001251224.1|160162_160762_+	glucosamine-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_000031107.1|160786_160936_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000901023.1|161486_161882_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000116234.1|162077_163463_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_000669376.1|163925_164747_-	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_000437967.1|164909_166022_+	GAF domain-containing sensor histidine kinase	NA	NA	NA	NA	NA
WP_001045135.1|166043_166667_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000375864.1|167022_167487_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000992522.1|167665_168790_+	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_000290301.1|168858_169203_+	YlbF/YmcA family competence regulator	NA	A0A1X9I5Y8	Streptococcus_phage	29.7	7.5e-06
WP_001802255.1|169695_169794_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000238226.1|170090_171287_+	exonuclease SbcCD subunit D	NA	NA	NA	NA	NA
WP_000584645.1|171276_174213_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_001244175.1|174209_175151_+	3'-5' exoribonuclease YhaM	NA	NA	NA	NA	NA
WP_077156036.1|175271_176234_-	peptidylprolyl isomerase	NA	NA	NA	NA	NA
WP_000477954.1|176438_176996_-	DUF3267 domain-containing protein	NA	NA	NA	NA	NA
WP_000648118.1|177728_178094_-	YtxH domain-containing protein	NA	NA	NA	NA	NA
WP_000004981.1|178235_178658_-	HIT family protein	NA	NA	NA	NA	NA
WP_000216873.1|178791_179532_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.8	2.0e-24
WP_000551840.1|179524_180748_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000737976.1|180871_181375_-	signal transduction protein TRAP	NA	NA	NA	NA	NA
WP_001790154.1|181537_181648_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000233526.1|181637_182675_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
WP_000162881.1|182732_183656_+	ferrochelatase	NA	NA	NA	NA	NA
WP_000167540.1|183679_185080_+	protoporphyrinogen oxidase	NA	NA	NA	NA	NA
WP_000132890.1|185400_185955_+	serine hydrolase family protein	NA	NA	NA	NA	NA
WP_000473596.1|188084_189020_+	bi-component leukocidin LukED subunit E	NA	A0A2H4PQI5	Staphylococcus_phage	100.0	1.4e-174
WP_000782446.1|189021_190005_+	bi-component leukocidin LukED subunit D	NA	A0A2H4PQH7	Staphylococcus_phage	99.1	2.3e-185
WP_000543853.1|190360_191152_-	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
WP_000550252.1|191156_191630_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001092752.1|192576_193158_-	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	61.1	1.2e-51
WP_001039429.1|194121_194829_+|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	96.6	1.5e-125
WP_001039447.1|194953_195676_+|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	99.6	2.4e-131
WP_001038877.1|195733_196456_+|protease	serine protease	protease	A0A2H4PQN0	Staphylococcus_phage	85.0	2.7e-114
WP_001039438.1|196513_197233_+|protease	serine protease	protease	A0A2H4PQP7	Staphylococcus_phage	86.6	1.6e-114
WP_001038761.1|197354_198071_+|protease	serine protease	protease	A0A2H4PQN5	Staphylococcus_phage	63.0	8.4e-84
WP_001038770.1|198240_198957_+|protease	serine protease	protease	A0A2H4PQN5	Staphylococcus_phage	65.1	9.0e-86
WP_072519256.1|199124_199844_+|protease	serine protease SplD	protease	A0A2H4PQP9	Staphylococcus_phage	97.1	4.7e-127
WP_077156037.1|199994_200714_+|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	99.6	7.1e-131
WP_031865257.1|200778_200913_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000028605.1|201077_202634_+	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	99.4	3.0e-288
WP_000072575.1|202626_203862_+	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	36.5	4.6e-45
>prophage 3
NZ_CP019563	Staphylococcus aureus strain SR434 chromosome, complete genome	2809136	210416	242808	2809136	protease	Staphylococcus_phage(93.33%)	34	NA	NA
WP_000494957.1|210416_211046_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4PQN8	Staphylococcus_phage	98.1	1.2e-78
WP_000414207.1|211243_211816_-	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	94.8	3.2e-25
WP_000627533.1|211916_212258_-	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	94.7	6.6e-55
WP_000669018.1|212298_212925_-	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	92.3	4.9e-88
WP_072519264.1|213000_213996_-	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	82.3	6.9e-68
WP_072398259.1|214076_214727_-	excalibur calcium-binding domain-containing protein	NA	A0A2H4PQM8	Staphylococcus_phage	98.6	5.2e-56
WP_072398272.1|215029_215485_+	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	98.6	3.0e-79
WP_000348351.1|215643_217122_+	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.0	5.3e-282
WP_000778520.1|217126_218128_+	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	98.2	1.3e-186
WP_000718107.1|218124_218382_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000672007.1|218447_218921_+	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.1	2.1e-83
WP_072398270.1|218925_219672_+	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.4	2.4e-142
WP_000109898.1|220049_221642_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	99.8	0.0e+00
WP_000933822.1|222013_223207_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.7	1.9e-218
WP_000366163.1|223331_224240_+	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	100.0	3.4e-138
WP_000453313.1|224451_225285_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	99.6	3.5e-158
WP_000623478.1|227508_227862_-	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	100.0	2.6e-22
WP_001200543.1|227858_228224_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	99.2	2.4e-58
WP_000091445.1|228479_228782_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001096494.1|229041_229755_+	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_001168911.1|230193_230829_-|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_001030469.1|231124_231568_+	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.6	2.4e-57
WP_001153742.1|231554_231998_-	competence protein ComK	NA	NA	NA	NA	NA
WP_000671053.1|232110_232581_-	RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	98.7	2.3e-82
WP_000384171.1|232779_233004_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001032833.1|233279_234134_+	glucosaminidase domain-containing protein	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_077156038.1|234220_235513_-	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	99.8	1.9e-227
WP_000221179.1|235512_235827_-	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	100.0	2.0e-53
WP_077156039.1|236349_237852_+	FAD/NAD(P)-binding protein	NA	A0A2H4PQX2	Staphylococcus_phage	100.0	2.3e-30
WP_000077352.1|238333_239377_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.8	2.0e-195
WP_000493888.1|239383_240016_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	100.0	3.4e-113
WP_001159035.1|240026_241208_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	100.0	1.7e-227
WP_001008549.1|241220_241685_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	100.0	4.5e-70
WP_001196356.1|241806_242808_-	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.4	2.6e-184
>prophage 4
NZ_CP019563	Staphylococcus aureus strain SR434 chromosome, complete genome	2809136	245969	258698	2809136	tRNA	Staphylococcus_phage(100.0%)	6	NA	NA
WP_000764419.1|245969_246533_-	class I SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
WP_000526539.1|246529_247483_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
WP_001025061.1|247592_248774_+	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	100.0	5.6e-218
WP_001557386.1|249061_251479_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.5	0.0e+00
WP_000836465.1|251500_251812_+	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	100.0	1.6e-52
WP_072519189.1|252137_258698_+	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	96.8	1.7e-300
>prophage 5
NZ_CP019563	Staphylococcus aureus strain SR434 chromosome, complete genome	2809136	382220	391263	2809136	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
WP_001005767.1|382220_383225_+	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
WP_001019178.1|383226_384252_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001112042.1|384274_385414_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	4.2e-85
WP_001160682.1|385432_385693_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_000749791.1|385967_388247_+	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_000594985.1|388449_390723_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.1	1.1e-63
WP_000364542.1|390744_391263_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
>prophage 6
NZ_CP019563	Staphylococcus aureus strain SR434 chromosome, complete genome	2809136	460810	469122	2809136	tRNA	Caulobacter_phage(16.67%)	7	NA	NA
WP_001217261.1|460810_462610_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	4.6e-54
WP_001283055.1|462833_463940_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_000624572.1|464070_464748_+|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_000683928.1|464750_465851_+	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	29.6	4.0e-08
WP_001062174.1|465964_467311_+	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	33.4	9.1e-55
WP_000924214.1|467320_468211_+	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	2.0e-26
WP_001213908.1|468336_469122_+	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
>prophage 7
NZ_CP019563	Staphylococcus aureus strain SR434 chromosome, complete genome	2809136	746382	752765	2809136		Staphylococcus_phage(83.33%)	9	NA	NA
WP_000572946.1|746382_746736_-	hypothetical protein	NA	A0A1J0MF61	Staphylococcus_phage	44.4	6.5e-21
WP_000585093.1|746912_747164_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001215405.1|747575_747749_+	hypothetical protein	NA	A0A059NT83	Lactococcus_phage	51.9	4.7e-09
WP_000477482.1|748805_749222_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000006110.1|749733_749919_-	hypothetical protein	NA	A0A0F6N3H3	Staphylococcus_phage	78.7	2.4e-19
WP_001788716.1|750345_750456_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001002340.1|751156_751363_-	hypothetical protein	NA	A0A2H4PQT0	Staphylococcus_phage	59.7	1.3e-13
WP_077156057.1|751653_751878_-	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	71.0	2.5e-18
WP_001814546.1|752567_752765_-	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	50.0	1.7e-10
>prophage 8
NZ_CP019563	Staphylococcus aureus strain SR434 chromosome, complete genome	2809136	1010355	1018828	2809136		Synechococcus_phage(33.33%)	9	NA	NA
WP_000238660.1|1010355_1010922_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.7	7.2e-30
WP_000030817.1|1010924_1011953_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.4	3.8e-61
WP_000483713.1|1011945_1013430_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	3.2e-45
WP_000032746.1|1013408_1015598_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.8	4.6e-141
WP_000666799.1|1015590_1016262_-	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000848350.1|1016263_1016527_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000174053.1|1016526_1017231_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
WP_001010412.1|1017234_1018359_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000861572.1|1018345_1018828_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
>prophage 9
NZ_CP019563	Staphylococcus aureus strain SR434 chromosome, complete genome	2809136	1206767	1211334	2809136	transposase,integrase	Staphylococcus_phage(50.0%)	9	1202573:1202589	1212197:1212213
1202573:1202589	attL	ACTGATACAAAATAAAA	NA	NA	NA	NA
WP_000813311.1|1206767_1207280_-	hypothetical protein	NA	Q4ZE83	Staphylococcus_phage	100.0	1.4e-69
WP_072398063.1|1207397_1207811_-	DUF3102 domain-containing protein	NA	A0A2H4JAH5	uncultured_Caudovirales_phage	67.9	1.1e-32
WP_023913543.1|1207939_1208704_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000598564.1|1208998_1209406_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000158489.1|1209398_1210046_-	DUF4065 domain-containing protein	NA	NA	NA	NA	NA
WP_029727366.1|1210273_1210735_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	A0A2I7SC85	Paenibacillus_phage	55.8	1.2e-43
WP_031865111.1|1210814_1211057_-	hypothetical protein	NA	A0A2H4PQV6	Staphylococcus_phage	86.8	3.3e-24
WP_001814548.1|1211098_1211254_-|transposase	IS3 family transposase	transposase	A0A0C5AJ30	Paenibacillus_phage	67.3	6.1e-08
WP_072398062.1|1211181_1211334_-	helix-turn-helix domain-containing protein	NA	A0A2H4PQU1	Staphylococcus_phage	87.5	3.6e-05
1212197:1212213	attR	ACTGATACAAAATAAAA	NA	NA	NA	NA
>prophage 10
NZ_CP019563	Staphylococcus aureus strain SR434 chromosome, complete genome	2809136	1269733	1284131	2809136		uncultured_Caudovirales_phage(50.0%)	14	NA	NA
WP_000616840.1|1269733_1270495_-	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	6.5e-18
WP_001245577.1|1270491_1271448_-	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000876318.1|1271434_1272406_-	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
WP_000499195.1|1272444_1272600_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000562498.1|1272780_1273752_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000855505.1|1273869_1275975_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000692521.1|1275937_1276336_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_001068495.1|1277136_1278003_+	DMT family transporter	NA	NA	NA	NA	NA
WP_000930014.1|1278022_1278523_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_000193751.1|1278863_1280369_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_031835073.1|1280445_1280547_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000429006.1|1280637_1281555_+	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	2.1e-07
WP_000197262.1|1282235_1282778_-	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000663014.1|1283072_1284131_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.7	1.8e-21
>prophage 11
NZ_CP019563	Staphylococcus aureus strain SR434 chromosome, complete genome	2809136	1296104	1303924	2809136		Pandoravirus(16.67%)	10	NA	NA
WP_001217794.1|1296104_1297256_-	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	36.1	3.5e-23
WP_000604515.1|1297239_1297833_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	43.5	1.2e-38
WP_000446724.1|1298183_1298852_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000941336.1|1298853_1299273_+	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_001062972.1|1299276_1299990_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000637687.1|1300088_1300673_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001093556.1|1300952_1301393_+	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_001037807.1|1301734_1302208_+	DoxX family protein	NA	NA	NA	NA	NA
WP_000149344.1|1302182_1302869_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_024273465.1|1302868_1303924_+	two-component system sensor histidine kinase SaeS	NA	A0A1V0SGX0	Hokovirus	30.0	2.1e-14
>prophage 12
NZ_CP019563	Staphylococcus aureus strain SR434 chromosome, complete genome	2809136	1387522	1461240	2809136	holin,tail,integrase,terminase,capsid,portal,head,plate,tRNA,transposase	Staphylococcus_phage(74.29%)	103	1382738:1382754	1416196:1416212
1382738:1382754	attL	AATATATAAATGACAAT	NA	NA	NA	NA
WP_001044915.1|1387522_1388083_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A141E172	Streptococcus_phage	35.1	5.7e-19
WP_000036088.1|1388241_1388445_+	DUF1659 domain-containing protein	NA	NA	NA	NA	NA
WP_000169043.1|1388461_1388686_+	DUF2922 domain-containing protein	NA	NA	NA	NA	NA
WP_001814600.1|1388880_1389810_+	DMT family transporter	NA	NA	NA	NA	NA
WP_001018677.1|1390757_1391132_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_001045430.1|1391382_1392171_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_001222133.1|1392339_1393056_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000735551.1|1393217_1393724_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000362977.1|1393859_1394660_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_000362481.1|1394643_1395363_-	HAD family hydrolase	NA	NA	NA	NA	NA
WP_010922824.1|1395417_1396368_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_000749044.1|1396518_1397406_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_001021150.1|1398758_1400420_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000359086.1|1400416_1400833_-	DUF1934 domain-containing protein	NA	NA	NA	NA	NA
WP_000655099.1|1400925_1401033_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001200748.1|1401107_1402118_-	alcohol dehydrogenase AdhP	NA	A0A2K9L339	Tupanvirus	27.3	5.6e-33
WP_001788287.1|1402616_1403138_-	YwhD family protein	NA	NA	NA	NA	NA
WP_000180234.1|1403165_1404461_-	HD domain-containing protein	NA	E3T4P8	Cafeteria_roenbergensis_virus	27.9	1.2e-24
WP_000477505.1|1404500_1404977_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000633786.1|1405145_1405682_-	flavodoxin family protein	NA	NA	NA	NA	NA
WP_031865124.1|1405890_1406829_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_000923046.1|1407099_1407726_-	DUF443 domain-containing protein	NA	NA	NA	NA	NA
WP_000882123.1|1407960_1408596_-	DUF443 domain-containing protein	NA	NA	NA	NA	NA
WP_000882174.1|1408632_1409274_-	DUF443 family protein	NA	NA	NA	NA	NA
WP_000882131.1|1410490_1411120_-	DUF443 family protein	NA	NA	NA	NA	NA
WP_077156140.1|1411166_1411808_-	DUF443 domain-containing protein	NA	NA	NA	NA	NA
WP_000882084.1|1411943_1412564_-	DUF443 family protein	NA	NA	NA	NA	NA
WP_001788281.1|1412586_1412703_-	hypothetical protein	NA	NA	NA	NA	NA
WP_072519122.1|1412759_1413389_-	DUF443 domain-containing protein	NA	NA	NA	NA	NA
WP_000882169.1|1413463_1414081_-	DUF443 family protein	NA	NA	NA	NA	NA
WP_077156075.1|1414168_1414810_-	DUF443 domain-containing protein	NA	NA	NA	NA	NA
WP_000898607.1|1414935_1415562_-	DUF443 family protein	NA	NA	NA	NA	NA
WP_000020783.1|1415565_1416975_-|transposase	transposase	transposase	NA	NA	NA	NA
1416196:1416212	attR	ATTGTCATTTATATATT	NA	NA	NA	NA
WP_031865126.1|1417440_1417542_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001047248.1|1417599_1418040_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_000498229.1|1418223_1418424_-	hypothetical protein	NA	A0A2H4PQS9	Staphylococcus_phage	100.0	3.5e-32
WP_000125170.1|1418437_1418644_-	hypothetical protein	NA	A0A2H4PQT0	Staphylococcus_phage	100.0	3.4e-30
WP_031807127.1|1419126_1419381_-	hypothetical protein	NA	A0A0K1LKD1	Staphylococcus_phage	97.6	3.8e-39
WP_031807126.1|1419435_1420881_-	SH3 domain-containing protein	NA	A0EWV1	Staphylococcus_virus	99.4	9.1e-295
WP_001556691.1|1420861_1421299_-|holin	phage holin	holin	B2ZZ05	Staphylococcus_phage	99.3	5.3e-73
WP_077156076.1|1421354_1421750_-	hypothetical protein	NA	Q4ZBP5	Staphylococcus_phage	99.2	3.0e-67
WP_064282041.1|1421754_1422993_-|plate	BppU family phage baseplate upper protein	plate	E0Y3M8	Staphylococcus_virus	99.0	1.9e-208
WP_029265300.1|1423005_1424880_-	glucosaminidase domain-containing protein	NA	Q4ZBX1	Staphylococcus_virus	99.8	0.0e+00
WP_000466769.1|1425016_1425316_-	DUF2951 domain-containing protein	NA	Q4ZBP8	Staphylococcus_phage	100.0	1.3e-46
WP_001790193.1|1425356_1425530_-	XkdX family protein	NA	Q8LTH6	Staphylococcus_phage	100.0	1.7e-27
WP_000705907.1|1425533_1425911_-	DUF2977 domain-containing protein	NA	Q4ZDT8	Staphylococcus_virus	99.2	8.1e-54
WP_048657605.1|1425910_1427734_-|plate	phage baseplate upper protein	plate	Q9FZY8	Staphylococcus_virus	99.2	2.5e-294
WP_077156077.1|1427733_1429632_-	hypothetical protein	NA	A0A0H3U448	Staphylococcus_phage	97.3	0.0e+00
WP_001122001.1|1429644_1431531_-|tail	phage tail protein	tail	Q4ZBQ3	Staphylococcus_phage	100.0	0.0e+00
WP_015984522.1|1431541_1432483_-|tail	phage tail family protein	tail	A1KXA7	Staphylococcus_virus	100.0	6.7e-182
WP_077156078.1|1432497_1435641_-|terminase	terminase	terminase	Q4ZBY3	Staphylococcus_virus	99.9	0.0e+00
WP_000880587.1|1435644_1435929_-	hypothetical protein	NA	A0A0N7E0V9	Staphylococcus_phage	100.0	8.8e-45
WP_000134337.1|1435973_1436480_-	hypothetical protein	NA	Q4ZBQ7	Staphylococcus_phage	100.0	2.7e-92
WP_000057582.1|1436546_1437104_-|tail	tail protein	tail	Q4ZBQ8	Staphylococcus_phage	100.0	8.2e-103
WP_000270192.1|1437104_1437530_-	DUF3168 domain-containing protein	NA	Q4ZBQ9	Staphylococcus_phage	100.0	5.5e-75
WP_001151330.1|1437542_1437956_-	HK97 gp10 family phage protein	NA	A0A0N9BAY5	Staphylococcus_phage	100.0	1.1e-75
WP_000483041.1|1437942_1438278_-|head	phage head closure protein	head	A0A0E3TAH8	Staphylococcus_phage	100.0	8.8e-60
WP_000177351.1|1438289_1438640_-|head,tail	phage head-tail adapter protein	head,tail	A0A0H3U2R5	Staphylococcus_phage	100.0	1.9e-60
WP_000002931.1|1438645_1438789_-	hypothetical protein	NA	A0A0E3XC49	Staphylococcus_phage	100.0	4.6e-18
WP_000235168.1|1438800_1439715_-|capsid	phage major capsid protein	capsid	A0A0H3U2U7	Staphylococcus_phage	100.0	1.2e-170
WP_077156079.1|1439731_1440316_-	DUF4355 domain-containing protein	NA	A0A2H4JDY6	uncultured_Caudovirales_phage	98.5	3.4e-75
WP_000346033.1|1440418_1440625_-	hypothetical protein	NA	A0A0N9BB04	Staphylococcus_phage	100.0	3.2e-28
WP_000184133.1|1440626_1441580_-|head	phage head morphogenesis protein	head	A0A0N7E0U6	Staphylococcus_phage	99.7	6.6e-177
WP_000177422.1|1441548_1442973_-|portal	phage portal protein	portal	Q4ZBZ7	Staphylococcus_virus	100.0	6.2e-272
WP_001037578.1|1442969_1444193_-|terminase	PBSX family phage terminase large subunit	terminase	A0A0N9BAX9	Staphylococcus_phage	100.0	7.5e-242
WP_000594088.1|1444185_1444680_-|terminase	terminase small subunit	terminase	A0A0N9BAX3	Staphylococcus_phage	100.0	3.4e-84
WP_000286968.1|1445034_1445436_-	hypothetical protein	NA	A0A2H4PQK5	Staphylococcus_phage	100.0	5.6e-69
WP_076692344.1|1445436_1445610_-	transcriptional regulator	NA	S4SVE4	Staphylococcus_phage	98.2	1.9e-21
WP_010924755.1|1445609_1445996_-	hypothetical protein	NA	Q4ZBS3	Staphylococcus_virus	99.2	1.5e-63
WP_000608278.1|1445985_1446222_-	hypothetical protein	NA	Q4ZDP0	Staphylococcus_virus	100.0	2.8e-36
WP_001613442.1|1446214_1446502_-	DUF1381 domain-containing protein	NA	Q4ZAB6	Staphylococcus_virus	96.8	4.4e-44
WP_001061837.1|1446538_1447066_-	dUTP diphosphatase	NA	I1W653	Staphylococcus_phage	97.7	3.3e-93
WP_000889684.1|1447080_1447242_-	hypothetical protein	NA	M9NTB4	Staphylococcus_phage	100.0	4.9e-24
WP_000028423.1|1447242_1447416_-	hypothetical protein	NA	A0A2H4PQJ2	Staphylococcus_phage	98.2	2.3e-24
WP_077156080.1|1447405_1447657_-	DUF1024 family protein	NA	A0EWY0	Staphylococcus_phage	98.8	2.4e-38
WP_031807825.1|1447649_1447934_-	hypothetical protein	NA	A1KX14	Staphylococcus_virus	96.8	4.4e-44
WP_031807826.1|1447930_1448368_-	hypothetical protein	NA	NA	NA	NA	NA
WP_031794818.1|1448364_1448559_-	hypothetical protein	NA	A0A0U2A067	Staphylococcus_phage	98.4	6.3e-26
WP_077156081.1|1448555_1448957_-	hypothetical protein	NA	A0A0H4IPW3	Staphylococcus_phage	80.6	2.1e-55
WP_075339544.1|1448971_1449220_-	hypothetical protein	NA	A0A2I6PF06	Staphylococcus_phage	97.6	5.2e-41
WP_000235326.1|1449228_1449429_-	hypothetical protein	NA	C5I650	Staphylococcus_phage	98.5	7.4e-30
WP_077156082.1|1449431_1449659_-	DUF3310 domain-containing protein	NA	B5WZM8	Staphylococcus_phage	98.7	1.9e-37
WP_020808085.1|1449733_1449922_-	DUF3113 family protein	NA	A0A0E3TAK3	Staphylococcus_phage	96.7	2.0e-24
WP_000049810.1|1449926_1450331_-	DUF1064 domain-containing protein	NA	A0A0H4ISQ5	Staphylococcus_phage	100.0	9.0e-67
WP_001123673.1|1450340_1450562_-	DUF3269 family protein	NA	A7TWN4	Staphylococcus_phage	100.0	1.3e-35
WP_000256597.1|1450574_1450733_-	hypothetical protein	NA	Q4ZBL5	Staphylococcus_phage	100.0	3.4e-22
WP_077156083.1|1450726_1451506_-	ATP-binding protein	NA	A7YGR0	Staphylococcus_virus	99.6	3.2e-145
WP_077156084.1|1451515_1452286_-	conserved phage C-terminal domain-containing protein	NA	W5R8N2	Staphylococcus_phage	99.6	1.8e-116
WP_000371252.1|1452350_1453199_+	DUF4393 domain-containing protein	NA	W5R9J9	Staphylococcus_phage	100.0	3.8e-160
WP_077156085.1|1453305_1453977_-	hypothetical protein	NA	W5R8I8	Staphylococcus_phage	98.2	4.9e-126
WP_000704705.1|1453989_1454541_-	single-stranded DNA-binding protein	NA	Q4ZBM4	Staphylococcus_phage	100.0	3.4e-101
WP_001288248.1|1454570_1455344_-	AAA family ATPase	NA	W5RAN1	Staphylococcus_phage	100.0	2.1e-141
WP_000002516.1|1455343_1455823_-	siphovirus Gp157 family protein	NA	A0A0H4J328	Staphylococcus_phage	100.0	1.1e-82
WP_031807830.1|1455837_1456098_-	DUF1108 family protein	NA	A1KX65	Staphylococcus_virus	96.5	1.3e-42
WP_000066025.1|1456189_1456351_-	DUF1270 domain-containing protein	NA	D2JGJ6	Staphylococcus_phage	98.1	7.2e-20
WP_000122246.1|1456504_1456750_+	hypothetical protein	NA	E9LT77	Staphylococcus_phage	100.0	6.9e-38
WP_001094942.1|1456705_1456921_-	hypothetical protein	NA	E9LT76	Staphylococcus_phage	100.0	2.2e-32
WP_061735430.1|1456936_1457689_-	phage antirepressor KilAC domain-containing protein	NA	A0A0H3U319	Staphylococcus_phage	99.2	1.6e-138
WP_001153965.1|1457845_1458154_-	hypothetical protein	NA	S4V9P0	Staphylococcus_phage	100.0	1.3e-49
WP_001106626.1|1458168_1458423_-	helix-turn-helix transcriptional regulator	NA	C5I625	Staphylococcus_phage	98.8	1.4e-41
WP_077156086.1|1458612_1459251_+	LexA family transcriptional regulator	NA	A0A0E3TAG1	Staphylococcus_phage	99.5	2.0e-116
WP_049295756.1|1459302_1459803_+	hypothetical protein	NA	A0A0H4IP55	Staphylococcus_phage	99.4	1.7e-46
WP_046594661.1|1459863_1461240_+	recombinase family protein	NA	A8R7E9	Staphylococcus_phage	99.1	1.1e-260
>prophage 13
NZ_CP019563	Staphylococcus aureus strain SR434 chromosome, complete genome	2809136	2803499	2809082	2809136	integrase	Staphylococcus_phage(77.78%)	10	2803421:2803435	2806995:2807009
2803421:2803435	attL	AATTTGATTATTATA	NA	NA	NA	NA
WP_000917289.1|2803499_2803784_+	co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
WP_000240642.1|2803859_2805476_+	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.7	3.4e-157
WP_000179346.1|2805544_2806717_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1W6JQD3	Staphylococcus_phage	97.9	1.3e-219
WP_072526376.1|2806725_2807358_-	helix-turn-helix transcriptional regulator	NA	A0A1W6JQE6	Staphylococcus_phage	99.5	2.8e-115
2806995:2807009	attR	TATAATAATCAAATT	NA	NA	NA	NA
WP_061838909.1|2807529_2807742_+	helix-turn-helix transcriptional regulator	NA	A0A1W6JQE8	Staphylococcus_phage	93.8	5.6e-28
WP_072526378.1|2807745_2808063_+	helix-turn-helix domain-containing protein	NA	A0A1W6JQE0	Staphylococcus_phage	96.2	1.3e-49
WP_000784886.1|2808059_2808215_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001171847.1|2808199_2808445_+	hypothetical protein	NA	A0A1W6JQF4	Staphylococcus_phage	97.0	1.2e-29
WP_000403843.1|2808404_2808788_+	hypothetical protein	NA	A0A1W6JQI7	Staphylococcus_phage	96.1	2.2e-62
WP_077156138.1|2808788_2809082_+	DUF1474 family protein	NA	A0A1W6JQH0	Staphylococcus_phage	61.8	4.4e-23
