The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP011705	Bordetella pertussis strain H842 chromosome, complete genome	4111642	0	59497	4111642	tRNA,transposase	Natrialba_phage(12.5%)	54	NA	NA
WP_010929569.1|0_1920_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
WP_003806878.1|1916_2609_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA	NA
WP_003806879.1|2605_3403_+	ParA family protein	NA	Q8JL10	Natrialba_phage	34.9	5.6e-20
WP_010929570.1|3409_4171_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010929571.1|4214_5132_+	ParB/RepB/Spo0J family partition protein	NA	I3NLC2	Bifidobacterium_phage	38.1	1.9e-16
WP_019247667.1|5124_5910_+	asparaginase	NA	NA	NA	NA	NA
WP_019247666.1|5943_6126_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003806883.1|6721_7912_+	elongation factor Tu	NA	A0A1V0SLW6	Klosneuvirus	29.2	3.1e-14
WP_003806884.1|8150_8531_+	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
WP_003806885.1|8540_9074_+	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	30.5	1.4e-11
WP_010929572.1|9137_9569_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
WP_003806887.1|9571_10270_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
WP_003806888.1|10512_11037_+	50S ribosomal protein L10	NA	NA	NA	NA	NA
WP_003806889.1|11118_11502_+	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
WP_010929573.1|11661_15774_+	DNA-directed RNA polymerase subunit beta	NA	A0A0N9R0J7	Chrysochromulina_ericina_virus	28.8	2.4e-21
WP_003818292.1|15773_20018_+	DNA-directed RNA polymerase subunit beta'	NA	A0A2I7QNZ7	Vibrio_phage	24.7	3.5e-68
WP_010929574.1|20126_20531_-	TssQ family T6SS-associated lipoprotein	NA	NA	NA	NA	NA
WP_010929575.1|20771_21947_+	membrane protein	NA	NA	NA	NA	NA
WP_077069004.1|21943_22894_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_127013036.1|22911_23100_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929576.1|25401_26508_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
WP_003818297.1|27519_28335_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_010930363.1|28331_29282_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995007.1|29363_29699_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929578.1|29723_30158_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247164.1|30190_31408_-	thiolase family protein	NA	NA	NA	NA	NA
WP_010929580.1|31413_31911_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_019247165.1|32118_33054_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929582.1|33263_34055_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929583.1|34097_35519_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010929584.1|35674_36625_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814398.1|36621_37812_-	MFS transporter	NA	NA	NA	NA	NA
WP_010929585.1|38061_38973_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010929586.1|38974_41113_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003814404.1|41109_41649_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|41652_42381_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|42367_43261_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247766.1|43331_43727_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|43736_44267_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_023852754.1|44395_44695_-	DUF1974 domain-containing protein	NA	NA	NA	NA	NA
WP_010929588.1|44712_45663_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929589.1|46249_46798_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|46769_47006_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|47133_48027_+	membrane protein	NA	NA	NA	NA	NA
WP_010929590.1|49196_50444_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|50440_51055_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_010929591.1|51190_52141_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443813.1|52183_53440_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|54671_55406_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|55411_56002_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|56026_56716_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|56712_57474_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|57553_58453_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|58546_59497_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP011705	Bordetella pertussis strain H842 chromosome, complete genome	4111642	70134	123122	4111642	tRNA,transposase	Planktothrix_phage(20.0%)	50	NA	NA
WP_005012808.1|70134_71085_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816713.1|71178_71493_+	DUF1153 domain-containing protein	NA	NA	NA	NA	NA
WP_010929604.1|72685_74593_+	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	37.2	1.1e-117
WP_010929605.1|74754_75375_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_003807804.1|75406_75988_-	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA	A0A1W6DX33	Sphingobium_phage	54.3	1.7e-05
WP_003807805.1|76076_76328_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929606.1|76329_77172_-	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA	NA
WP_010929607.1|77277_78687_+	signal recognition particle protein	NA	NA	NA	NA	NA
WP_005012067.1|78683_79634_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166334.1|79708_80653_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929608.1|80649_82524_-	polysaccharide biosynthesis protein	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
WP_003807102.1|83871_84576_-	DUF2837 family protein	NA	NA	NA	NA	NA
WP_003807104.1|84572_85679_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010929610.1|85940_86534_-	sugar transferase	NA	NA	NA	NA	NA
WP_023853419.1|86530_87718_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	NA	NA	NA	NA
WP_010929612.1|87780_89040_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010929613.1|89063_90152_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
WP_010929614.1|90159_91260_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
WP_003807114.1|91263_91839_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_003807115.1|91842_92895_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_010929615.1|93025_94033_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
WP_010929616.1|94034_95321_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
WP_010929617.1|95517_96321_-	type III pantothenate kinase	NA	NA	NA	NA	NA
WP_010929618.1|96317_97184_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_010929619.1|97258_98389_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003807131.1|98388_99228_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
WP_010929620.1|100160_100763_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929621.1|100792_101446_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003807138.1|101578_102835_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
WP_023853421.1|102915_103782_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_003818417.1|103857_104133_+	YbeD family protein	NA	NA	NA	NA	NA
WP_010929623.1|104140_104803_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
WP_003807146.1|104864_105866_+	lipoyl synthase	NA	NA	NA	NA	NA
WP_003807148.1|105880_106429_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
WP_010929624.1|106486_107383_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_010929625.1|107379_108441_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
WP_010929626.1|108476_109427_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929627.1|110326_111520_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_010929628.1|111601_112231_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_010927242.1|112292_112976_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_023853376.1|112985_114668_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003815933.1|114955_115303_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
WP_003815930.1|115393_115711_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|115993_117010_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815929.1|117085_117886_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003815927.1|117882_118758_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010929633.1|118768_120061_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929634.1|120103_121144_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
WP_010929635.1|121249_122071_-	phosphodiesterase	NA	NA	NA	NA	NA
WP_005012067.1|122171_123122_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP011705	Bordetella pertussis strain H842 chromosome, complete genome	4111642	165943	226454	4111642	tRNA,transposase,protease	Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)	51	NA	NA
WP_005015810.1|165943_166894_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929659.1|168337_169240_-	YgcG family protein	NA	NA	NA	NA	NA
WP_003815889.1|169217_169847_-	LemA family protein	NA	NA	NA	NA	NA
WP_010929660.1|170129_171560_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.8	5.8e-44
WP_010929661.1|171593_172223_+	LysE family transporter	NA	NA	NA	NA	NA
WP_003815895.1|172271_173879_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
WP_010929663.1|173903_174587_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815898.1|174668_175145_-	bacterioferritin	NA	NA	NA	NA	NA
WP_010929591.1|175351_176302_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929664.1|177417_177945_+	META domain-containing protein	NA	NA	NA	NA	NA
WP_010929665.1|178036_178852_+	META and DUF4377 domain-containing protein	NA	NA	NA	NA	NA
WP_003808370.1|178912_179647_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_010929666.1|179684_181763_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
WP_003808374.1|182012_182285_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446322.1|182386_183472_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010929668.1|183475_185380_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA	NA
WP_014486044.1|185376_189051_+	DUF490 domain-containing protein	NA	NA	NA	NA	NA
WP_010929670.1|189111_189675_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
WP_003808385.1|189682_190105_-	glyoxalase	NA	NA	NA	NA	NA
WP_010929671.1|190132_190552_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_077274090.1|190580_191027_-	GNAT family N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	29.4	1.2e-08
WP_003808391.1|191153_191651_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003808393.1|191805_194076_+	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA	NA
WP_019249381.1|194151_195357_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010929591.1|195455_196406_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929673.1|196508_197144_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.8e-83
WP_019248671.1|197140_198034_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_010929675.1|198428_199529_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_010929676.1|199610_199985_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_010929677.1|200044_202909_+	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
WP_010929678.1|203053_203794_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929679.1|203863_205075_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929680.1|205103_206072_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931070.1|206685_207636_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929699.1|207792_208116_+	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
WP_023853200.1|208220_209261_-	cyclase	NA	NA	NA	NA	NA
WP_010929697.1|209266_210046_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
WP_003807672.1|210091_210388_-	YciI family protein	NA	NA	NA	NA	NA
WP_003807674.1|210413_210689_-	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
WP_003819086.1|210745_211390_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010929696.1|211389_212076_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_033446325.1|212274_213057_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929694.1|213107_213833_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929693.1|213864_215214_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929692.1|215325_216258_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_033455792.1|216715_219511_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
WP_023994893.1|220104_222948_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_010929689.1|223118_223838_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_010929688.1|223876_224425_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929687.1|224579_225479_+	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_005012808.1|225503_226454_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP011705	Bordetella pertussis strain H842 chromosome, complete genome	4111642	234386	287974	4111642	tRNA,transposase,protease	Bacillus_phage(25.0%)	47	NA	NA
WP_005012067.1|234386_235337_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|235423_236374_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930742.1|236370_237321_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929700.1|237419_238217_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003814363.1|239166_239577_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA	NA
WP_003814358.1|240598_241342_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814356.1|241385_242429_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814355.1|242599_244702_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_003814351.1|246112_247069_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929701.1|247087_247579_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_010929702.1|247575_248931_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
WP_010929703.1|248931_249630_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_010929704.1|249626_250328_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_003814339.1|250580_251630_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
WP_003814337.1|251735_252677_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_010929705.1|252673_254563_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
WP_003814332.1|254649_255288_+	membrane protein	NA	NA	NA	NA	NA
WP_019247543.1|255430_256816_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
WP_010929706.1|256746_257283_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_010929707.1|257434_258826_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_010929708.1|258842_259823_-	AEC family transporter	NA	NA	NA	NA	NA
WP_003814324.1|259958_260942_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
WP_010929709.1|261006_261906_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814321.1|262012_263767_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_010929710.1|263774_264899_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929711.1|264912_265893_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929591.1|266623_267574_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929712.1|268133_268679_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852659.1|268804_270382_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004567834.1|270397_271552_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_003817696.1|271565_271691_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_010929714.1|271687_273439_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
WP_010929715.1|273435_275115_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
WP_010929716.1|275177_275726_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.3e-28
WP_010929717.1|276868_277147_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|278190_279141_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077068974.1|279127_279343_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929718.1|279418_279580_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_003815821.1|280246_280696_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
WP_003815819.1|280705_281317_-	stringent starvation protein A	NA	NA	NA	NA	NA
WP_010929720.1|281475_282324_-	cytochrome c1	NA	NA	NA	NA	NA
WP_003815816.1|282349_283732_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_003815815.1|283796_284438_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_010929721.1|284577_285036_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_010927226.1|285060_285837_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_014906092.1|285890_287027_+|protease	trypsin-like serine protease	protease	W5SAB9	Pithovirus	31.2	1.2e-07
WP_005015810.1|287023_287974_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP011705	Bordetella pertussis strain H842 chromosome, complete genome	4111642	391906	449415	4111642	transposase	Orpheovirus(14.29%)	50	NA	NA
WP_005012067.1|391906_392857_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927231.1|392993_393911_+	reductase	NA	NA	NA	NA	NA
WP_003815842.1|393907_394156_+	glutaredoxin family protein	NA	NA	NA	NA	NA
WP_003815840.1|394152_395358_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486045.1|395430_396426_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486046.1|396448_397669_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486047.1|397665_398310_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248476.1|400040_400850_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486048.1|401154_402108_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	42.5	5.6e-59
WP_014486049.1|402206_403190_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486050.1|403116_403818_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486051.1|403866_404637_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_019247259.1|404633_405812_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486052.1|405979_407686_-	thiamine pyrophosphate-requiring protein	NA	NA	NA	NA	NA
WP_014486053.1|407682_408579_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486054.1|408619_410209_-	sulfurtransferase	NA	NA	NA	NA	NA
WP_003807867.1|410258_411251_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807865.1|411319_411919_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014486055.1|412379_413360_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929577.1|413435_414386_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122777.1|414474_415389_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929782.1|415385_416045_+	LysE family translocator	NA	NA	NA	NA	NA
WP_003814709.1|416134_417058_+	alpha/beta fold hydrolase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	27.2	4.8e-07
WP_010929783.1|417063_417519_-	multidrug/biocide efflux PACE transporter	NA	NA	NA	NA	NA
WP_010929784.1|417515_418619_-	ChbG/HpnK family deacetylase	NA	NA	NA	NA	NA
WP_157734656.1|418577_418847_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010927086.1|418806_420426_-	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_003814720.1|420422_421481_-	glycosyltransferase family 2 protein	NA	I1TED8	Salmonella_phage	40.5	2.8e-59
WP_033446199.1|421610_422105_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_022997984.1|422197_423175_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929785.1|423370_424576_+	sodium/glutamate symporter	NA	NA	NA	NA	NA
WP_010929786.1|424572_426084_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_003814726.1|426099_427413_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_003814728.1|427603_427783_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814730.1|428192_428927_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
WP_010929577.1|431371_432322_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247421.1|432453_432852_-	GTP-binding protein	NA	E4ZFJ7	Streptococcus_phage	44.3	9.0e-19
WP_003814701.1|433262_433733_-	universal stress protein	NA	NA	NA	NA	NA
WP_003820700.1|433821_434166_-	TIGR01244 family phosphatase	NA	NA	NA	NA	NA
WP_010929788.1|434265_435666_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010929789.1|437454_437973_-	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	38.9	2.1e-12
WP_003814694.1|438083_438839_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	40.8	2.9e-42
WP_003814691.1|439034_440267_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929791.1|440259_441045_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_003814685.1|441111_442083_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003814681.1|442093_443071_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247419.1|443196_444369_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010929793.1|444395_445424_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003814674.1|445489_446683_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_005012067.1|448464_449415_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
NZ_CP011705	Bordetella pertussis strain H842 chromosome, complete genome	4111642	591469	652661	4111642	transposase,protease	uncultured_Mediterranean_phage(40.0%)	56	NA	NA
WP_005013747.1|591469_592420_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446133.1|592895_593786_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_010931496.1|593782_594604_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_019247235.1|594804_595296_+	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_019247236.1|595314_596388_+	CHAD domain-containing protein	NA	NA	NA	NA	NA
WP_023853086.1|596434_597538_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
WP_003808577.1|597613_598234_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_003808574.1|598254_598764_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	42.1	1.2e-28
WP_003808570.1|598818_599070_+	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	53.4	1.6e-18
WP_010931494.1|599133_600267_+	benzoate/H(+) symporter BenE family transporter	NA	NA	NA	NA	NA
WP_003808567.1|600274_600661_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931493.1|600657_603177_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003808563.1|603605_603944_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003808562.1|603940_604447_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_010931492.1|604508_605309_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931491.1|605419_606361_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931490.1|606454_607990_-	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931489.1|609669_611520_-	dipeptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.2	1.6e-17
WP_003808549.1|611523_612357_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931488.1|612356_613298_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931487.1|613549_614521_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931486.1|614662_616951_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003808542.1|617257_618166_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010931485.1|618220_619186_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931484.1|619260_620922_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_010931483.1|620993_621704_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_154698388.1|621670_621835_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|621852_622803_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814152.1|623501_623885_+	membrane protein	NA	NA	NA	NA	NA
WP_010927005.1|623942_624545_+	DUF2946 family protein	NA	NA	NA	NA	NA
WP_003820995.1|624562_624964_-	DoxX family protein	NA	NA	NA	NA	NA
WP_010931482.1|625079_625991_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931481.1|625987_626569_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_003814165.1|627363_628098_+	arginyltransferase	NA	NA	NA	NA	NA
WP_010931480.1|628138_629188_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_003814172.1|629335_629914_-	TIGR01841 family phasin	NA	NA	NA	NA	NA
WP_010931479.1|630300_631278_+	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA	NA
WP_010931478.1|631371_635766_-	dermonecrotic toxin	NA	NA	NA	NA	NA
WP_003814178.1|635966_636815_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931477.1|636973_637786_-	competence/damage-inducible protein A	NA	NA	NA	NA	NA
WP_005015810.1|637841_638792_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931453.1|638890_639691_-	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_003814185.1|639752_640136_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_033446148.1|640147_641500_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	2.1e-51
WP_003814188.1|641787_642117_-	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_010931455.1|642119_642869_-	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010931456.1|643051_643972_+	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_003814195.1|644018_644231_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931457.1|644253_644676_+	SnoaL-like domain-containing protein	NA	NA	NA	NA	NA
WP_010931458.1|644692_645793_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931459.1|645889_647407_-|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_003814203.1|647482_648322_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_033446149.1|648343_649216_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814206.1|649306_650401_-	porin	NA	NA	NA	NA	NA
WP_076879617.1|650694_651645_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166340.1|651719_652661_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
NZ_CP011705	Bordetella pertussis strain H842 chromosome, complete genome	4111642	657985	704176	4111642	tRNA,transposase,tail,terminase	uncultured_Caudovirales_phage(18.18%)	51	NA	NA
WP_023995141.1|657985_659011_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814221.1|659051_659291_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931464.1|659360_660950_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_010931465.1|660949_661498_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_003814226.1|661578_662151_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010927008.1|662169_663081_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814230.1|663154_664123_-	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010931466.1|664245_665319_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_010931467.1|665323_667144_-	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_010930800.1|667220_668171_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446132.1|668259_668595_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_003819076.1|668728_669379_+	carbonic anhydrase	NA	NA	NA	NA	NA
WP_010931468.1|669400_670819_-	amidase	NA	NA	NA	NA	NA
WP_019248554.1|670888_671644_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247734.1|671612_672371_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931471.1|672381_673263_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931472.1|673279_673987_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931473.1|673989_674748_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931474.1|674957_676700_+	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010925795.1|676692_677217_+	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931475.1|677256_678051_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248926.1|678218_679292_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|679390_680341_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247378.1|680592_680799_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931451.1|680870_681482_-	S24 family peptidase	NA	NA	NA	NA	NA
WP_023853179.1|682036_682288_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_161633094.1|682280_682970_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853183.1|682987_683209_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|683226_684177_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247942.1|684816_685302_+|transposase	transposase	transposase	C7U0W1	Enterobacteria_phage	61.5	7.3e-39
WP_010931447.1|685288_686566_+|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_010931446.1|686568_687987_+	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931445.1|688015_689071_+	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931444.1|689076_689319_+	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931443.1|689441_690044_+	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_005012808.1|690472_691423_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931442.1|692097_692349_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|692411_692894_+	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_162096760.1|692907_693096_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931439.1|693095_693491_+	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_010931438.1|693487_693886_+	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931437.1|693882_694305_+	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_010931436.1|694312_694813_+	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931435.1|695067_695586_+	hypothetical protein	NA	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_003813412.1|695595_695925_+	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931434.1|695942_696233_+	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_010931433.1|696258_698871_+|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931432.1|698880_699240_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931431.1|699307_699841_+	DUF1833 family protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931430.1|699837_700227_+	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931429.1|700219_704176_+	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
>prophage 8
NZ_CP011705	Bordetella pertussis strain H842 chromosome, complete genome	4111642	710342	764271	4111642	tRNA,transposase	Planktothrix_phage(50.0%)	45	NA	NA
WP_003814636.1|710342_712073_+|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
WP_010931419.1|712125_712554_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814641.1|712556_713237_+	protein TolQ	NA	NA	NA	NA	NA
WP_003814643.1|713236_713695_+	protein TolR	NA	NA	NA	NA	NA
WP_010931417.1|714721_716038_+	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_003814650.1|716069_716567_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_003814652.1|716653_717343_+	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_010931416.1|717342_718392_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003814657.1|718388_719183_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
WP_019247923.1|719351_719702_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247922.1|719677_720235_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012808.1|721364_722315_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929184.1|724452_725682_+	spore maturation protein	NA	NA	NA	NA	NA
WP_003814419.1|725684_727127_-	pyruvate kinase	NA	NA	NA	NA	NA
WP_010931414.1|727231_728377_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_010931413.1|728408_729206_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931412.1|729230_730790_-	chaperone SurA	NA	NA	NA	NA	NA
WP_010931411.1|730786_733159_-	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931410.1|733268_734372_+	phosphotransferase	NA	NA	NA	NA	NA
WP_010931409.1|734371_735064_+	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_003814436.1|735207_735909_+	membrane protein	NA	NA	NA	NA	NA
WP_003814437.1|735893_736271_-	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_005012067.1|737002_737953_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814441.1|738112_738985_-	oxaloacetate decarboxylase	NA	NA	NA	NA	NA
WP_003814443.1|739325_739544_+	DUF1059 domain-containing protein	NA	NA	NA	NA	NA
WP_019247242.1|739583_740963_-	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_010929976.1|741004_742402_-	amidase family protein	NA	NA	NA	NA	NA
WP_010927038.1|742441_744094_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.8	6.0e-16
WP_010929977.1|744097_744982_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929978.1|744981_745923_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929979.1|746001_747621_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929980.1|747787_748603_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814459.1|748670_749240_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|749240_750191_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814461.1|750845_751943_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_003814462.1|751976_753242_+	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929591.1|753399_754350_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929982.1|754593_755184_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_010929983.1|755199_757644_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_003814467.1|757763_758735_-	FecR family protein	NA	NA	NA	NA	NA
WP_023852739.1|758866_759391_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_005012067.1|759350_760301_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929984.1|760522_762718_-	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_020699729.1|762790_763198_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|763320_764271_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP011705	Bordetella pertussis strain H842 chromosome, complete genome	4111642	886860	1027434	4111642	transposase	Bacillus_phage(11.11%)	114	NA	NA
WP_023994644.1|886860_887877_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003813988.1|888073_889057_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930019.1|890655_892044_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003813991.1|892074_893064_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813992.1|893174_894407_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003813993.1|894688_895489_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930018.1|895511_897743_-	BCCT family transporter	NA	NA	NA	NA	NA
WP_010930017.1|898530_898977_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_003813996.1|898998_899745_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_003813997.1|899888_900866_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
WP_010930016.1|901499_902111_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
WP_003813999.1|902104_903322_-	threonine ammonia-lyase	NA	NA	NA	NA	NA
WP_005013747.1|903462_904413_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814000.1|904409_905129_-	lipoprotein	NA	NA	NA	NA	NA
WP_003821234.1|905249_907409_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_003814002.1|907499_907769_-	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_005019401.1|907857_908064_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814003.1|908062_908590_+	lipoprotein	NA	NA	NA	NA	NA
WP_003814004.1|908608_909388_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930015.1|909555_910572_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_003814006.1|910644_911136_-	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_003814007.1|911146_912862_-	acetolactate synthase 3 catalytic subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.3	3.1e-60
WP_005012067.1|914025_914976_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930051.1|914972_916805_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
WP_010930052.1|917203_917863_+	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
WP_010930054.1|918390_919071_-	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_010930055.1|919352_920069_+	flagellar brake protein	NA	NA	NA	NA	NA
WP_010930056.1|920083_921385_-	phospholipase	NA	NA	NA	NA	NA
WP_029444137.1|923529_926418_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010930057.1|926641_927994_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_004568140.1|928022_928544_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_003819989.1|928540_929995_+	carboxylase	NA	NA	NA	NA	NA
WP_023852826.1|930029_930278_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247557.1|930383_931259_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010930060.1|931284_932340_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930061.1|932352_933144_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930062.1|933176_934547_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_005012067.1|935723_936674_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930064.1|936726_936948_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810832.1|937107_937320_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|937439_938558_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810837.1|938654_938870_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810839.1|939063_939315_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930066.1|939427_940378_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810840.1|940374_940758_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_023852913.1|940812_942627_-	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
WP_010930068.1|942776_943604_+	oxidoreductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
WP_010930069.1|943649_944630_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_003810850.1|944626_944839_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810851.1|944835_946017_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_019248496.1|946180_946915_+	serine/threonine protein phosphatase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
WP_010930071.1|946916_949529_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_003810859.1|949664_951578_-	S9 family peptidase	NA	NA	NA	NA	NA
WP_010930072.1|952193_952604_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003810865.1|952701_953787_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_005012067.1|953885_954836_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930088.1|954832_955807_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003821497.1|955931_956843_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
WP_004566317.1|957119_957512_-	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
WP_005012808.1|957641_958592_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930090.1|958621_958804_-	type II toxin-antitoxin system HicA family toxin	NA	A0A1L2JY37	Aeribacillus_phage	56.1	3.7e-12
WP_010930091.1|959576_960758_-	MFS transporter	NA	NA	NA	NA	NA
WP_010930092.1|960973_961651_-	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_010930093.1|961647_962373_-	bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase	NA	NA	NA	NA	NA
WP_010930094.1|962498_963080_-	OmpA family protein	NA	NA	NA	NA	NA
WP_010930095.1|963450_966132_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	3.2e-104
WP_023852687.1|966134_967265_+	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	44.0	4.9e-78
WP_010930097.1|967257_968343_+	prephenate dehydratase	NA	NA	NA	NA	NA
WP_010930098.1|968429_969329_+	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010930099.1|969325_970654_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_010930100.1|970668_971340_+	(d)CMP kinase	NA	NA	NA	NA	NA
WP_010930101.1|971527_973243_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_010930102.1|973244_973604_+	integration host factor subunit beta	NA	NA	NA	NA	NA
WP_010930103.1|973795_974110_+	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
WP_010930104.1|974152_975373_+	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
WP_010930105.1|975369_976311_+	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A2H4N7X4	Lake_Baikal_phage	28.1	1.5e-16
WP_003821513.1|976307_977297_+	ADP-glyceromanno-heptose 6-epimerase	NA	E3SJ87	Synechococcus_phage	34.4	2.2e-26
WP_033446303.1|977331_977916_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|978014_978965_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486062.1|979045_979957_+	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	38.8	8.0e-47
WP_010930108.1|980017_981163_-	lytic murein transglycosylase B	NA	NA	NA	NA	NA
WP_003821521.1|981182_982097_+	histone deacetylase family protein	NA	A0A2K9KZC4	Tupanvirus	34.7	9.8e-45
WP_010930110.1|982168_982918_+	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
WP_010930111.1|982917_983847_+	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA	NA
WP_003821527.1|984090_985917_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003813333.1|985999_986641_+	peroxiredoxin	NA	NA	NA	NA	NA
WP_003821528.1|986830_987865_+	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930112.1|989707_990772_+	sulfate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.3	3.8e-24
WP_010930113.1|991569_992478_+	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA	NA
WP_023852693.1|993965_995240_+	PA0069 family radical SAM protein	NA	NA	NA	NA	NA
WP_023852686.1|995393_995774_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014905652.1|995781_996654_-	EamA family transporter	NA	NA	NA	NA	NA
WP_003813315.1|996959_997340_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_003813314.1|997550_998276_+	CoA pyrophosphatase	NA	NA	NA	NA	NA
WP_010929591.1|998371_999322_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930118.1|999426_1000476_+	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
WP_010931363.1|1000613_1001630_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010926548.1|1003138_1003711_-	chorismate lyase	NA	NA	NA	NA	NA
WP_010930119.1|1003770_1004502_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_029443805.1|1004553_1005471_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930121.1|1006278_1009458_+	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_014486063.1|1009454_1010837_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010930123.1|1010906_1011158_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_010930124.1|1011303_1011918_-	SCO family protein	NA	NA	NA	NA	NA
WP_010930125.1|1012104_1014165_-	M3 family metallopeptidase	NA	NA	NA	NA	NA
WP_003811948.1|1014294_1015146_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
WP_010930126.1|1015142_1015769_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003817147.1|1015765_1017520_-	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_010930127.1|1017812_1020518_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_010930128.1|1020530_1022192_+	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
WP_010930129.1|1022204_1023995_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
WP_003817151.1|1024216_1025392_-	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_010929584.1|1025434_1026385_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929969.1|1026483_1027434_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP011705	Bordetella pertussis strain H842 chromosome, complete genome	4111642	1048385	1099046	4111642	holin,tRNA,transposase	uncultured_Mediterranean_phage(50.0%)	42	NA	NA
WP_005012067.1|1048385_1049336_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811933.1|1049634_1050372_-	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
WP_010930143.1|1050807_1051131_+	flagellar transcriptional regulator FlhD	NA	NA	NA	NA	NA
WP_003811929.1|1051165_1051726_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
WP_003811927.1|1051846_1052722_+	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
WP_003817154.1|1052734_1053682_+	flagellar motor protein MotB	NA	NA	NA	NA	NA
WP_019247393.1|1053783_1054077_+	response regulator	NA	NA	NA	NA	NA
WP_010930144.1|1054103_1056161_+	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_003811919.1|1056175_1056676_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_010930145.1|1056749_1058456_+	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
WP_010930146.1|1059319_1060372_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_003811911.1|1060424_1060814_+	chemotaxis protein CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
WP_003817162.1|1060822_1061455_+	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_010931363.1|1061554_1062571_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003819773.1|1063401_1064409_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_014486064.1|1064405_1066049_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_010930149.1|1066045_1066933_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003809396.1|1067073_1067547_-	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_010930151.1|1067536_1068559_-	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
WP_015041211.1|1068555_1069983_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010931363.1|1070920_1071937_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003809411.1|1072269_1073205_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.5	3.0e-41
WP_010930154.1|1073254_1075135_-	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_003809416.1|1075201_1075546_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.4	1.0e-10
WP_010930155.1|1075689_1076826_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
WP_023853534.1|1076822_1077896_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_003809423.1|1078053_1079490_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_010930157.1|1079580_1080222_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_010930158.1|1080557_1081574_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|1083514_1084465_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930160.1|1085769_1087191_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_003809431.1|1087454_1088171_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003809432.1|1088255_1088573_+	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003819794.1|1088613_1089027_+|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_010930161.1|1089028_1089388_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853525.1|1089430_1090975_-	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
WP_010930163.1|1091058_1091889_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_010930164.1|1091923_1093078_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_010930165.1|1093120_1093993_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486065.1|1094109_1096398_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003809441.1|1097604_1098069_+	barstar family protein	NA	NA	NA	NA	NA
WP_005013747.1|1098095_1099046_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_CP011705	Bordetella pertussis strain H842 chromosome, complete genome	4111642	1114300	1179371	4111642	tRNA,transposase	Catovirus(25.0%)	46	NA	NA
WP_010929591.1|1114300_1115251_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_161633091.1|1115831_1116539_+	DUF192 domain-containing protein	NA	NA	NA	NA	NA
WP_003812707.1|1116897_1117884_-	homoserine kinase	NA	NA	NA	NA	NA
WP_010930178.1|1118023_1119037_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_005012067.1|1119033_1119984_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_155120815.1|1120001_1120142_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003812703.1|1120096_1120555_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003812701.1|1120591_1121905_-	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_010930180.1|1121922_1122294_+	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
WP_019248549.1|1122290_1123754_+	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
WP_010930182.1|1123894_1124623_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_010930183.1|1124604_1127454_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010929591.1|1127666_1128617_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930184.1|1128784_1129609_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
WP_010930185.1|1129608_1130487_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930186.1|1131391_1132507_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_020699602.1|1132535_1133330_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.3	1.2e-11
WP_010930188.1|1133326_1135192_+	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
WP_003812436.1|1135270_1135903_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930189.1|1135899_1136202_-	membrane protein	NA	NA	NA	NA	NA
WP_010930190.1|1136244_1137765_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
WP_010926447.1|1137771_1138527_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010926448.1|1138556_1139661_-	peptide chain release factor 2	NA	NA	NA	NA	NA
WP_010930191.1|1139763_1141464_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.3	1.3e-50
WP_010930192.1|1141445_1142423_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247537.1|1142432_1143713_+	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_003812422.1|1143705_1144401_+	lipoprotein-releasing ABC transporter ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	38.6	7.0e-35
WP_010928340.1|1144434_1145262_+	TatD family hydrolase	NA	NA	NA	NA	NA
WP_010930194.1|1145543_1148774_+	autotransporter SphB3	NA	NA	NA	NA	NA
WP_010930196.1|1149509_1153436_+	inverse autotransporter beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_023853221.1|1155335_1157132_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248398.1|1157131_1158100_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816844.1|1158169_1159015_+	PHP domain-containing protein	NA	NA	NA	NA	NA
WP_003812405.1|1159082_1159637_+	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_010930198.1|1159683_1160634_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930199.1|1160732_1161365_-	fimbrial protein	NA	NA	NA	NA	NA
WP_010930200.1|1161528_1163811_-	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_010930201.1|1163965_1166662_-	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA	NA
WP_010930202.1|1166787_1167276_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813631.1|1169686_1172557_+	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_010930204.1|1172602_1173817_+	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_003813626.1|1174046_1175474_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	2.1e-41
WP_023853245.1|1175571_1176663_+	cell division protein ZapE	NA	NA	NA	NA	NA
WP_010930206.1|1176675_1177434_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003813621.1|1177521_1178424_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|1178420_1179371_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_CP011705	Bordetella pertussis strain H842 chromosome, complete genome	4111642	1319005	1387492	4111642	transposase	Planktothrix_phage(33.33%)	58	NA	NA
WP_005012808.1|1319005_1319956_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930283.1|1320724_1321363_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_019247793.1|1322252_1322699_+	glutamate racemase	NA	NA	NA	NA	NA
WP_010930284.1|1322780_1323482_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.4	1.3e-17
WP_003811277.1|1323482_1324250_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.4	1.2e-14
WP_010930285.1|1324246_1325485_-	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA	NA
WP_003811272.1|1325484_1326411_-	high-affinity branched-chain amino acid ABC transporter permease LivH	NA	NA	NA	NA	NA
WP_010930286.1|1326513_1327629_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005015810.1|1327644_1328595_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930287.1|1328948_1329530_-	queuosine precursor transporter	NA	A0A2I7SAW6	Vibrio_phage	37.3	9.4e-17
WP_003811267.1|1329526_1330360_-	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
WP_010930288.1|1330570_1331884_+	sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA	NA	NA	NA	NA
WP_003811262.1|1332060_1332942_+	sn-glycerol-3-phosphate ABC transporter permease UgpA	NA	NA	NA	NA	NA
WP_003811259.1|1332961_1333813_+	sn-glycerol-3-phosphate ABC transporter permease UgpE	NA	NA	NA	NA	NA
WP_010930289.1|1333865_1334954_+	sn-glycerol-3-phosphate import ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	31.2	2.2e-19
WP_010930290.1|1335064_1336192_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003811244.1|1336426_1337038_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010929584.1|1337136_1338087_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811293.1|1338308_1338686_-	DUF423 domain-containing protein	NA	NA	NA	NA	NA
WP_003811295.1|1338833_1339331_+	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
WP_010930291.1|1339327_1339855_+	RES family NAD+ phosphorylase	NA	NA	NA	NA	NA
WP_003811298.1|1339988_1340804_+	exported protein	NA	NA	NA	NA	NA
WP_010930292.1|1340816_1341998_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_003811301.1|1342045_1342939_-	phosphatidylserine decarboxylase	NA	NA	NA	NA	NA
WP_010930293.1|1343065_1343536_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930294.1|1343661_1344489_-	DUF3298 domain-containing protein	NA	NA	NA	NA	NA
WP_003811306.1|1344517_1345294_-	lipoate--protein ligase family protein	NA	NA	NA	NA	NA
WP_023852802.1|1345290_1345566_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930295.1|1345580_1346045_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930296.1|1346056_1346758_-	thiol:disulfide oxidoreductase	NA	NA	NA	NA	NA
WP_003811310.1|1346867_1347368_-	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	38.4	4.7e-25
WP_010930297.1|1347450_1348629_-	DUF1501 domain-containing protein	NA	NA	NA	NA	NA
WP_003811313.1|1350256_1350592_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_010930298.1|1350779_1352228_+	CoA transferase	NA	NA	NA	NA	NA
WP_023852799.1|1352285_1352630_+	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	58.4	3.0e-31
WP_003811316.1|1352736_1353276_-	peroxiredoxin	NA	NA	NA	NA	NA
WP_005012067.1|1353368_1354319_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268679.1|1354336_1354576_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247530.1|1355057_1355489_-	BcpO-related WXXGXW repeat protein	NA	NA	NA	NA	NA
WP_010930300.1|1355670_1356075_-	DoxX family protein	NA	NA	NA	NA	NA
WP_010930301.1|1357311_1357635_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247533.1|1357637_1358525_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_003811322.1|1358557_1358983_-	universal stress protein	NA	NA	NA	NA	NA
WP_019247534.1|1359054_1359408_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811324.1|1359647_1360154_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930302.1|1360192_1361524_-	transcriptional regulator PtsJ	NA	NA	NA	NA	NA
WP_003811326.1|1361583_1362399_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_010930303.1|1362395_1363250_+	pyridoxine/pyridoxal/pyridoxamine kinase	NA	NA	NA	NA	NA
WP_010930304.1|1366312_1368856_-	malto-oligosyltrehalose synthase	NA	NA	NA	NA	NA
WP_010930305.1|1370222_1371977_-	malto-oligosyltrehalose trehalohydrolase	NA	NA	NA	NA	NA
WP_010930306.1|1371973_1374094_-	glycogen debranching protein GlgX	NA	NA	NA	NA	NA
WP_010930307.1|1374098_1376294_-	1,4-alpha-glucan branching protein GlgB	NA	NA	NA	NA	NA
WP_010930308.1|1376290_1379632_-	maltose alpha-D-glucosyltransferase	NA	NA	NA	NA	NA
WP_010930208.1|1382434_1383385_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811361.1|1383450_1383630_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247449.1|1383746_1384502_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010930310.1|1384488_1385634_-	DUF3182 family protein	NA	NA	NA	NA	NA
WP_010930208.1|1386541_1387492_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP011705	Bordetella pertussis strain H842 chromosome, complete genome	4111642	1447983	1503470	4111642	transposase,protease	Mollivirus(16.67%)	56	NA	NA
WP_005012067.1|1447983_1448934_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811846.1|1450135_1450582_-	flagellar export protein FliJ	NA	NA	NA	NA	NA
WP_019247562.1|1450574_1452050_-	flagellar protein export ATPase FliI	NA	NA	NA	NA	NA
WP_010930338.1|1452046_1452802_-	flagellar assembly protein FliH	NA	NA	NA	NA	NA
WP_003817203.1|1452794_1453805_-	flagellar motor switch protein FliG	NA	NA	NA	NA	NA
WP_010930339.1|1453794_1455471_-	flagellar basal body M-ring protein FliF	NA	NA	NA	NA	NA
WP_010930340.1|1455783_1456116_+	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA	NA
WP_010930341.1|1456129_1456525_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930342.1|1456534_1456861_-	flagellar biosynthesis protein FlhB	NA	NA	NA	NA	NA
WP_019247563.1|1456857_1457184_-	flagellar hook-length control protein FliK	NA	NA	NA	NA	NA
WP_023997203.1|1457110_1457524_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930343.1|1458128_1458479_-	flagellar protein FliT	NA	NA	NA	NA	NA
WP_010930344.1|1458526_1458955_-	flagellar export chaperone FliS	NA	NA	NA	NA	NA
WP_010930345.1|1458962_1460336_-	flagellar filament capping protein FliD	NA	NA	NA	NA	NA
WP_003817216.1|1460476_1460854_-	flagellar protein FlaG	NA	NA	NA	NA	NA
WP_010930346.1|1461116_1462424_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_023852965.1|1462484_1463315_+	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_003811815.1|1463311_1463800_+	CvpA family protein	NA	NA	NA	NA	NA
WP_003811814.1|1463841_1465362_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	43.7	4.8e-97
WP_003811812.1|1465405_1465882_-	disulfide bond formation protein B	NA	NA	NA	NA	NA
WP_010930348.1|1466685_1469283_-	[protein-PII] uridylyltransferase	NA	NA	NA	NA	NA
WP_003811806.1|1469312_1470134_-	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
WP_003811803.1|1470860_1471610_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
WP_010926570.1|1471793_1472672_+	elongation factor Ts	NA	NA	NA	NA	NA
WP_010930349.1|1472769_1473486_+	UMP kinase	NA	NA	NA	NA	NA
WP_003811796.1|1473500_1474061_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_010930350.1|1474227_1474992_+	di-trans,poly-cis-decaprenylcistransferase	NA	R9W0U9	Flavobacterium_phage	36.1	1.7e-18
WP_010930351.1|1475011_1475869_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003811788.1|1475865_1477065_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_010930352.1|1477104_1478439_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_010930353.1|1478491_1480828_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
WP_003811782.1|1480953_1481517_+	OmpH family outer membrane protein	NA	NA	NA	NA	NA
WP_010930354.1|1481525_1482617_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
WP_003811776.1|1482688_1483144_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA	NA
WP_010930355.1|1483144_1483939_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
WP_010930356.1|1483935_1485117_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
WP_003811770.1|1485103_1485709_+	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	40.2	8.8e-26
WP_003811768.1|1485705_1486479_+	RNA methyltransferase	NA	NA	NA	NA	NA
WP_010930357.1|1486490_1487318_-	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
WP_010930358.1|1487479_1489843_+	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	35.9	2.2e-165
WP_010930359.1|1489910_1490630_-	glutamine amidotransferase	NA	NA	NA	NA	NA
WP_003811761.1|1490753_1491179_+	membrane protein	NA	NA	NA	NA	NA
WP_005012067.1|1491213_1492164_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811759.1|1492281_1493208_+	paraslipin	NA	NA	NA	NA	NA
WP_010930360.1|1493273_1494431_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
WP_003811754.1|1494411_1494879_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
WP_005015810.1|1495026_1495977_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811752.1|1495993_1496428_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_003811750.1|1496417_1496768_+	RnfH family protein	NA	NA	NA	NA	NA
WP_003811748.1|1496964_1498119_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003811746.1|1498115_1499288_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003811743.1|1499335_1500229_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003811741.1|1500274_1500712_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_010930362.1|1500771_1501461_+	VIT family protein	NA	NA	NA	NA	NA
WP_010930363.1|1501470_1502421_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|1502519_1503470_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP011705	Bordetella pertussis strain H842 chromosome, complete genome	4111642	1598167	1658079	4111642	tRNA,transposase	Streptococcus_virus(12.5%)	50	NA	NA
WP_010930416.1|1598167_1598656_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_019248504.1|1598773_1599352_+	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010930418.1|1599457_1599826_+	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|1599924_1600875_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994932.1|1600881_1601994_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
WP_010930419.1|1602680_1603883_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930420.1|1604086_1606747_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930421.1|1606759_1610164_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_023995689.1|1610831_1613057_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.5	1.2e-43
WP_010930423.1|1613103_1613430_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_010930424.1|1613480_1614089_+	recombination protein RecR	NA	NA	NA	NA	NA
WP_005013747.1|1614187_1615138_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|1615236_1616187_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930425.1|1616256_1617021_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446226.1|1617017_1617554_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930427.1|1617720_1618572_-	membrane protein	NA	A0A1I9SA48	Rhodococcus_phage	35.3	7.0e-37
WP_010928449.1|1618631_1619258_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
WP_005012067.1|1619254_1620205_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019249265.1|1620303_1621416_-	DUF1513 domain-containing protein	NA	NA	NA	NA	NA
WP_019248041.1|1621405_1622407_-	imelysin family protein	NA	NA	NA	NA	NA
WP_019247498.1|1622512_1624024_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_023853587.1|1624020_1625325_-	imelysin	NA	NA	NA	NA	NA
WP_010930431.1|1625436_1625997_-	membrane protein	NA	NA	NA	NA	NA
WP_010930432.1|1626264_1626819_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	32.0	1.7e-15
WP_010930433.1|1627274_1627490_-	dodecin domain-containing protein	NA	NA	NA	NA	NA
WP_033446228.1|1627744_1630342_+	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	22.6	1.5e-21
WP_010930435.1|1630338_1631526_+	cupin	NA	NA	NA	NA	NA
WP_010930436.1|1632184_1632799_+	serotype 3 fimbrial subunit	NA	NA	NA	NA	NA
WP_023994740.1|1632887_1634009_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA	NA
WP_033446216.1|1634026_1634932_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_005012067.1|1635824_1636775_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930439.1|1636956_1637709_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
WP_003811112.1|1637777_1638437_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
WP_003811113.1|1638433_1639162_+	glutamine ABC transporter ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	39.3	3.3e-35
WP_010930440.1|1639174_1641454_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	32.1	5.9e-06
WP_010930441.1|1641478_1641682_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_010930442.1|1641723_1642356_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	33.9	2.4e-13
WP_010930443.1|1642491_1643409_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_010930444.1|1643405_1644119_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_003811135.1|1644356_1645127_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003811137.1|1645131_1645731_-	C40 family peptidase	NA	A0A0A8WF62	Clostridium_phage	41.6	1.4e-20
WP_003811138.1|1645975_1647466_+	AMP nucleosidase	NA	NA	NA	NA	NA
WP_010926696.1|1647524_1647809_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003811148.1|1648374_1649301_-	YicC family protein	NA	NA	NA	NA	NA
WP_003811149.1|1649437_1650178_+	ribonuclease PH	NA	NA	NA	NA	NA
WP_010930446.1|1650344_1651721_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003811152.1|1651902_1652808_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930448.1|1654459_1656262_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_003811159.1|1656379_1657030_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA	NA
WP_005012808.1|1657128_1658079_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP011705	Bordetella pertussis strain H842 chromosome, complete genome	4111642	1703251	1758842	4111642	transposase	Brazilian_cedratvirus(25.0%)	47	NA	NA
WP_005013747.1|1703251_1704202_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930486.1|1704260_1705034_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486074.1|1705026_1706583_+	LTA synthase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1706579_1707530_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810741.1|1708856_1709459_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810743.1|1709698_1710400_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003816696.1|1710393_1711176_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_005012808.1|1711360_1712311_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930483.1|1712409_1713147_-	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_010926609.1|1713336_1714095_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930482.1|1714141_1715131_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930481.1|1715308_1716277_-	transporter	NA	NA	NA	NA	NA
WP_010930480.1|1717816_1718785_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930479.1|1718793_1719735_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|1720208_1721219_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930477.1|1721209_1722724_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930476.1|1722720_1724067_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930475.1|1724069_1725104_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_023852967.1|1725153_1726779_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_005012067.1|1727331_1728282_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930487.1|1728386_1729334_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247865.1|1729387_1731202_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_010930489.1|1731194_1731869_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_023995112.1|1731998_1735073_+	autotransporter SphB2	NA	NA	NA	NA	NA
WP_019247905.1|1735086_1735386_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930492.1|1735700_1736324_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_010930493.1|1736567_1737437_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010930494.1|1737414_1738359_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247909.1|1738444_1739371_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247910.1|1739483_1740263_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930497.1|1740253_1741450_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010930498.1|1741480_1742431_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_010930499.1|1742652_1743342_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930500.1|1743406_1744162_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930501.1|1744213_1745206_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930502.1|1745215_1746169_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811538.1|1746284_1747247_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019249376.1|1748648_1749077_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1749073_1750024_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930503.1|1750317_1751040_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_010930504.1|1751478_1752666_-	MFS transporter	NA	NA	NA	NA	NA
WP_010930505.1|1752669_1753020_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930506.1|1754769_1755741_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930507.1|1755754_1756468_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930508.1|1756472_1757390_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811452.1|1757496_1757793_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929588.1|1757891_1758842_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
NZ_CP011705	Bordetella pertussis strain H842 chromosome, complete genome	4111642	1991606	2061258	4111642	tRNA,transposase	Staphylococcus_phage(16.67%)	55	NA	NA
WP_003818515.1|1991606_1994264_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	39.0	3.3e-173
WP_010930709.1|1994341_1995544_-	MFS transporter	NA	NA	NA	NA	NA
WP_003810260.1|1995540_1996053_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247822.1|1996175_1996613_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931070.1|1996889_1997840_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_062826579.1|1997938_1998889_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853105.1|1999052_2000948_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.5	2.3e-19
WP_010930711.1|2001061_2001229_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_003810297.1|2001292_2001529_-	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_033446265.1|2001897_2003049_-	multidrug effflux MFS transporter	NA	NA	NA	NA	NA
WP_010929591.1|2004612_2005563_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818523.1|2006014_2007016_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810306.1|2007188_2008046_+	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA	NA
WP_003810308.1|2008042_2009305_+	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.8e-28
WP_003818524.1|2009405_2009780_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
WP_010930713.1|2009852_2011040_+	acetyl-CoA C-acyltransferase family protein	NA	NA	NA	NA	NA
WP_010930714.1|2011124_2011895_+	spermidine synthase	NA	NA	NA	NA	NA
WP_010930715.1|2012008_2012773_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930716.1|2012723_2014025_+	malonyl-CoA decarboxylase	NA	NA	NA	NA	NA
WP_010930717.1|2014021_2014828_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_003818532.1|2016572_2017544_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003818533.1|2017700_2018213_+	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	52.3	1.8e-43
WP_010930718.1|2018371_2019346_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930719.1|2020346_2021141_+	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.7	5.1e-05
WP_003818535.1|2021166_2021973_-	TOBE domain-containing protein	NA	NA	NA	NA	NA
WP_003810329.1|2022083_2022674_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_010930720.1|2022684_2023863_+	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_010930721.1|2023965_2024340_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_019248531.1|2024592_2025924_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_019247651.1|2025990_2029221_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_003810344.1|2030711_2031458_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_010930724.1|2031542_2032004_+	holo-ACP synthase	NA	NA	NA	NA	NA
WP_010930725.1|2032041_2033100_+	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_010930726.1|2033062_2034892_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_003810356.1|2034931_2035504_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930727.1|2036928_2037750_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	4.1e-42
WP_010930728.1|2038068_2039391_+	isocitrate lyase	NA	NA	NA	NA	NA
WP_010930729.1|2039750_2040386_+	membrane protein	NA	NA	NA	NA	NA
WP_010930730.1|2040345_2041296_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930731.1|2042166_2043039_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930732.1|2043116_2044256_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930733.1|2044614_2045871_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_003816691.1|2045876_2046404_+	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_003816690.1|2046408_2047227_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003816687.1|2047226_2047949_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930735.1|2047970_2048285_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930736.1|2048302_2049451_+	CoA transferase	NA	NA	NA	NA	NA
WP_010930737.1|2049481_2050357_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816680.1|2050353_2051673_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_014486081.1|2051745_2052942_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_010930739.1|2052952_2054440_-	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_010930740.1|2057034_2057934_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852887.1|2058071_2059037_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005015810.1|2059135_2060086_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2060307_2061258_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
NZ_CP011705	Bordetella pertussis strain H842 chromosome, complete genome	4111642	2072754	2122150	4111642	transposase	Erysipelothrix_phage(16.67%)	45	NA	NA
WP_005013747.1|2072754_2073705_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812172.1|2074842_2075139_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247707.1|2075313_2076666_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	2.9e-45
WP_010930153.1|2076808_2077825_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930748.1|2079804_2080818_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_010930749.1|2080904_2081810_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812179.1|2081966_2082311_+	exported protein	NA	NA	NA	NA	NA
WP_010930750.1|2082468_2082927_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_010930751.1|2082940_2085157_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_003812183.1|2085153_2086215_+	XdhC family protein	NA	NA	NA	NA	NA
WP_010930752.1|2086243_2087218_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930753.1|2087169_2087988_-	hypothetical protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	28.8	2.3e-16
WP_003812191.1|2088000_2088609_-	peptidase S16	NA	NA	NA	NA	NA
WP_010930754.1|2088783_2089179_+	VOC family protein	NA	NA	NA	NA	NA
WP_010930755.1|2089197_2090637_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	37.4	7.4e-55
WP_003812199.1|2090665_2091013_+	GFA family protein	NA	NA	NA	NA	NA
WP_010929577.1|2091031_2091982_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2092634_2093585_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997035.1|2093668_2095486_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
WP_019247659.1|2095559_2096207_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930758.1|2096219_2097149_-	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_014905663.1|2097318_2097783_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003816977.1|2098030_2098711_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003816975.1|2098759_2100451_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
WP_010930760.1|2100466_2101018_-	SRPBCC family protein	NA	NA	NA	NA	NA
WP_003816971.1|2101014_2101386_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930761.1|2101498_2102335_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_029443822.1|2102345_2102870_-	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_003812228.1|2102967_2103147_+	DUF3008 family protein	NA	NA	NA	NA	NA
WP_010930763.1|2103276_2104251_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003816964.1|2104381_2104738_+	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
WP_010930764.1|2104727_2105603_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_010930765.1|2105701_2106586_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930766.1|2106607_2107903_-	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_003816959.1|2108851_2109502_+	flavodoxin family protein	NA	NA	NA	NA	NA
WP_010930767.1|2109589_2111110_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930768.1|2111367_2113233_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|2114278_2115229_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268681.1|2115246_2115387_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930769.1|2116201_2116561_-	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_010930770.1|2116548_2117985_-	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930771.1|2117981_2118635_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930772.1|2118631_2119825_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930773.1|2119928_2121203_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_005012067.1|2121199_2122150_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
NZ_CP011705	Bordetella pertussis strain H842 chromosome, complete genome	4111642	2133354	2174045	4111642	tRNA,transposase,protease	Klosneuvirus(25.0%)	37	NA	NA
WP_005013747.1|2133354_2134305_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2134403_2135354_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122784.1|2135313_2135727_-	transcriptional regulator	NA	A0A222YXG1	Escherichia_phage	59.0	3.8e-36
WP_003816708.1|2136011_2136311_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930783.1|2136720_2139003_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	30.1	3.2e-36
WP_124740709.1|2139468_2139663_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930784.1|2139688_2141719_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	41.9	1.0e-65
WP_006218592.1|2141738_2141951_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_003810720.1|2142228_2142768_-	phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_023852902.1|2142881_2144177_-	adenylosuccinate synthase	NA	A0A160ER07	Powai_lake_megavirus	33.5	3.0e-63
WP_010930786.1|2144253_2145411_-	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
WP_010930787.1|2145594_2146494_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_010930788.1|2146512_2147817_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930789.1|2147782_2148889_-	GTPase HflX	NA	NA	NA	NA	NA
WP_003810707.1|2148976_2149213_-	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930790.1|2149351_2150422_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810703.1|2150425_2151781_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_023852925.1|2151807_2152965_-	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_010930791.1|2152970_2153609_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_033446258.1|2153610_2154906_-|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_033446257.1|2154955_2156242_-	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_003810693.1|2156257_2156764_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_004568542.1|2156760_2157909_-	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_003810689.1|2157936_2158362_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
WP_010930794.1|2158684_2161567_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
WP_023852900.1|2161659_2162415_-	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_010930796.1|2163180_2164530_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_076879566.1|2164628_2165579_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930048.1|2165677_2166628_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930594.1|2166701_2167175_+	RidA family protein	NA	NA	NA	NA	NA
WP_010930593.1|2167200_2168409_+	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_003816734.1|2168405_2169179_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_014905757.1|2169178_2169802_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_010926757.1|2169967_2170228_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_010930591.1|2170531_2171113_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004568544.1|2171179_2171434_-	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_010930590.1|2171420_2174045_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
>prophage 19
NZ_CP011705	Bordetella pertussis strain H842 chromosome, complete genome	4111642	2201828	2315490	4111642	tRNA,transposase,protease	Lake_Baikal_phage(11.54%)	100	NA	NA
WP_010929577.1|2201828_2202779_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930573.1|2202979_2203789_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_005013747.1|2203913_2204864_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930572.1|2204860_2205754_-	methylglyoxal synthase	NA	NA	NA	NA	NA
WP_003812452.1|2205878_2206073_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA	NA
WP_003812453.1|2206072_2206414_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_010930571.1|2206423_2208286_-	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	42.4	3.0e-101
WP_003812456.1|2208415_2208928_-	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA	NA
WP_003812458.1|2208930_2209254_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	52.8	6.8e-25
WP_003812460.1|2209255_2209666_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	79.0	7.5e-53
WP_010930570.1|2209703_2210915_-	IscS subfamily cysteine desulfurase	NA	NA	NA	NA	NA
WP_003812463.1|2210932_2211445_-	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA	NA
WP_010930569.1|2211660_2212152_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
WP_010930568.1|2212404_2214441_-	excinuclease ABC subunit UvrB	NA	NA	NA	NA	NA
WP_019247244.1|2214518_2215721_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_010930566.1|2215849_2216500_+	transcriptional repressor LexA	NA	A0A2H4JG58	uncultured_Caudovirales_phage	50.7	3.3e-10
WP_005012067.1|2218057_2219008_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247934.1|2219578_2219791_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247935.1|2219808_2220540_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812478.1|2220574_2221216_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010930565.1|2221208_2221877_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010930564.1|2224089_2224866_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930563.1|2224887_2226045_-	thiolase	NA	NA	NA	NA	NA
WP_003812491.1|2226041_2226473_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930562.1|2226469_2227267_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010930561.1|2227286_2227688_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_010930560.1|2227754_2228726_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930559.1|2228791_2230015_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247936.1|2230242_2231193_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930557.1|2231316_2233770_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.0	1.5e-220
WP_010930556.1|2233958_2235263_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	53.8	3.2e-129
WP_003812508.1|2235367_2236021_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	57.5	6.8e-56
WP_010930555.1|2236023_2237334_-	trigger factor	NA	NA	NA	NA	NA
WP_076879561.1|2237512_2238091_+	TIGR00645 family protein	NA	K4K6D8	Caulobacter_phage	33.7	1.0e-23
WP_010930553.1|2238202_2238403_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.4	7.4e-14
WP_003812519.1|2238748_2239315_-	DUF924 family protein	NA	NA	NA	NA	NA
WP_010930551.1|2239398_2239602_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.1	1.6e-16
WP_003812524.1|2239908_2240229_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812526.1|2240270_2240552_-	membrane protein	NA	NA	NA	NA	NA
WP_010930550.1|2240626_2241883_-	autotransporter Phg	NA	NA	NA	NA	NA
WP_010930549.1|2242265_2242595_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003812536.1|2244165_2244987_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
WP_010930548.1|2244986_2246126_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
WP_019247938.1|2246132_2247029_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_033446179.1|2247043_2248951_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	31.8	1.1e-66
WP_010926400.1|2249310_2251923_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_003812546.1|2251975_2254276_-	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	35.9	9.9e-110
WP_003812548.1|2254272_2255481_-	aminotransferase	NA	NA	NA	NA	NA
WP_010930545.1|2255742_2256117_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2256113_2257064_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879626.1|2257162_2259157_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.3	4.4e-21
WP_010930543.1|2259216_2260182_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_010930542.1|2260171_2263033_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
WP_010930541.1|2263035_2263542_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_010930540.1|2263646_2264855_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	30.0	3.8e-36
WP_033446178.1|2264856_2265795_-	membrane protein	NA	NA	NA	NA	NA
WP_010930538.1|2265956_2266430_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|2266426_2267377_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2267487_2268438_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566334.1|2268536_2268977_-	DUF937 domain-containing protein	NA	NA	NA	NA	NA
WP_010930537.1|2269105_2270335_-	lytic murein transglycosylase	NA	NA	NA	NA	NA
WP_004566336.1|2270373_2271195_-	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_029443743.1|2271248_2272400_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930535.1|2272491_2272980_-	DUF1854 domain-containing protein	NA	NA	NA	NA	NA
WP_019247811.1|2275530_2278080_+	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_010930533.1|2278150_2280724_+	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_003813568.1|2280989_2281190_+	CsbD family protein	NA	NA	NA	NA	NA
WP_003813570.1|2281221_2281383_+	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
WP_003813572.1|2281440_2281779_+	BON domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|2281927_2282878_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2282976_2283927_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247882.1|2284701_2285370_+	arylesterase	NA	NA	NA	NA	NA
WP_010930531.1|2285351_2287307_-	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_004568486.1|2287549_2288299_+	glycerophosphodiester phosphodiesterase	NA	A0A2H4PGQ5	Escherichia_phage	27.8	1.5e-14
WP_003816518.1|2288311_2289175_+	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
WP_003816520.1|2289178_2290594_-	dihydrolipoyl dehydrogenase	NA	NA	NA	NA	NA
WP_010930530.1|2290727_2291456_-	redoxin family protein	NA	A0A1D8KSL1	Synechococcus_phage	56.8	9.6e-43
WP_003811035.1|2291594_2291795_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_003816523.1|2291970_2292369_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003816525.1|2292392_2293793_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	26.5	7.3e-31
WP_010930529.1|2293911_2294664_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003816527.1|2294952_2295630_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248494.1|2295656_2296436_-	3'-5' exonuclease	NA	NA	NA	NA	NA
WP_003811022.1|2296432_2297317_-	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A292GJG6	Xanthomonas_phage	49.5	4.6e-15
WP_019247478.1|2297334_2298114_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.9	4.8e-32
WP_010930526.1|2298098_2298857_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.2	1.4e-68
WP_023852762.1|2298994_2299630_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_010929632.1|2299897_2300914_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930524.1|2301011_2302052_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	51.3	6.1e-91
WP_003811011.1|2302186_2303479_+	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	36.0	1.7e-66
WP_003811007.1|2304838_2305222_+	thioredoxin family protein	NA	V9SJ74	Achromobacter_phage	25.8	8.1e-09
WP_010930523.1|2305239_2305827_-	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	35.8	4.7e-16
WP_010930048.1|2305864_2306815_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930801.1|2306913_2307474_-	diaminobutyrate acetyltransferase	NA	NA	NA	NA	NA
WP_010930802.1|2307470_2308016_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003818661.1|2308211_2309240_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930803.1|2309280_2310621_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	22.8	8.8e-18
WP_003818658.1|2310729_2311734_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010930804.1|2311840_2314441_+	TRAP transporter fused permease subunit	NA	NA	NA	NA	NA
WP_010930522.1|2314539_2315490_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NZ_CP011705	Bordetella pertussis strain H842 chromosome, complete genome	4111642	2354603	2418181	4111642	transposase,protease	uncultured_Caudovirales_phage(11.11%)	49	NA	NA
WP_010931070.1|2354603_2355554_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809615.1|2355855_2356332_-	transcription elongation factor GreA	NA	NA	NA	NA	NA
WP_019247142.1|2356955_2358593_+	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	30.2	8.8e-12
WP_003809610.1|2358623_2359937_-	pyrimidine permease	NA	Q9KX94	Enterobacteria_phage	67.1	2.1e-149
WP_004568205.1|2360070_2360388_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023852827.1|2360488_2361811_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|2361807_2362758_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2362856_2363807_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930836.1|2364336_2365359_-	putative 2-aminoethylphosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003820286.1|2365387_2366218_-	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA	NA
WP_029443740.1|2366234_2367932_-	putative 2-aminoethylphosphonate ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010930838.1|2367996_2369073_-	putative 2-aminoethylphosphonate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.8	1.2e-28
WP_010930839.1|2369232_2370096_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930840.1|2370126_2370696_+	phosphohydrolase	NA	NA	NA	NA	NA
WP_010930841.1|2370712_2371564_-	sulfurtransferase	NA	NA	NA	NA	NA
WP_003813142.1|2372621_2373503_+|protease	protease HtpX	protease	NA	NA	NA	NA
WP_010930842.1|2373577_2374567_-	quinone oxidoreductase	NA	NA	NA	NA	NA
WP_010930843.1|2374629_2375580_-	DMT family transporter	NA	NA	NA	NA	NA
WP_003813147.1|2375642_2376500_+	DMT family transporter	NA	NA	NA	NA	NA
WP_003813149.1|2376559_2377048_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930844.1|2378620_2379811_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_010930845.1|2379807_2381394_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_010930846.1|2381412_2382480_-	tartrate dehydrogenase	NA	NA	NA	NA	NA
WP_010930847.1|2382584_2384129_-	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	25.4	3.1e-14
WP_010930848.1|2384548_2386123_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_023997180.1|2386239_2387247_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003813165.1|2387243_2388083_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930850.1|2388087_2389725_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	3.6e-21
WP_005013747.1|2389721_2390672_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268683.1|2390689_2390833_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930851.1|2390814_2392089_+	4-aminobutyrate--2-oxoglutarate transaminase	NA	A0A1V0SKB7	Klosneuvirus	27.9	1.6e-24
WP_010930852.1|2392118_2392409_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_047122810.1|2392481_2393495_+	histone deacetylase family protein	NA	A0A2K9L4C2	Tupanvirus	35.2	1.7e-42
WP_010930854.1|2393514_2394777_+	Zn-dependent hydrolase	NA	NA	NA	NA	NA
WP_010930855.1|2394779_2395703_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010930856.1|2395699_2397193_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930857.1|2397203_2398136_-	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA	NA
WP_076879554.1|2398317_2399643_+	aspartate aminotransferase family protein	NA	A0A1C9EHH3	Mycobacterium_phage	22.5	1.8e-07
WP_010930859.1|2399677_2401033_-	sodium:alanine symporter family protein	NA	NA	NA	NA	NA
WP_023853666.1|2401093_2402614_-	DUF853 domain-containing protein	NA	A0A248XCZ8	Klebsiella_phage	44.9	1.7e-78
WP_010930861.1|2402768_2403500_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_023853662.1|2403597_2404908_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_010930863.1|2404923_2405835_+	oxygen-dependent coproporphyrinogen oxidase	NA	NA	NA	NA	NA
WP_010930864.1|2405825_2406419_+	nicotinate (nicotinamide) nucleotide adenylyltransferase	NA	NA	NA	NA	NA
WP_003813196.1|2406480_2406867_+	ribosome silencing factor	NA	NA	NA	NA	NA
WP_003813199.1|2406878_2407349_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
WP_010930865.1|2407360_2407984_+	septum formation inhibitor Maf	NA	NA	NA	NA	NA
WP_010930866.1|2408004_2410752_-	autotransporter Vag8	NA	NA	NA	NA	NA
WP_005012808.1|2417230_2418181_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
NZ_CP011705	Bordetella pertussis strain H842 chromosome, complete genome	4111642	2538329	2604050	4111642	tRNA,transposase,protease	Salmonella_phage(15.38%)	59	NA	NA
WP_023853254.1|2538329_2540273_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566380.1|2540269_2541190_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930928.1|2541209_2541797_-	DNA repair protein RecO	NA	NA	NA	NA	NA
WP_003813784.1|2541789_2542680_-	GTPase Era	NA	NA	NA	NA	NA
WP_023853248.1|2542676_2543438_-	ribonuclease III	NA	M4QNJ2	Ostreococcus_lucimarinus_virus	33.0	3.1e-20
WP_010930929.1|2543443_2544328_-	signal peptidase I	NA	NA	NA	NA	NA
WP_010930930.1|2544350_2546144_-	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	23.5	8.4e-24
WP_004566381.1|2546274_2547762_-|protease	DegQ family serine endoprotease	protease	W5SAB9	Pithovirus	31.5	1.2e-07
WP_010930931.1|2547799_2548858_-	siderophore-interacting protein	NA	NA	NA	NA	NA
WP_023853242.1|2548857_2549358_-	sigma-E factor negative regulatory protein	NA	NA	NA	NA	NA
WP_003813797.1|2549370_2549970_-	RNA polymerase sigma factor RpoE	NA	A0A0F6TH34	Sinorhizobium_phage	26.1	2.2e-05
WP_010930933.1|2549966_2550467_-	membrane protein	NA	NA	NA	NA	NA
WP_003813802.1|2550468_2551698_-	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA	NA
WP_003813816.1|2551887_2552127_-	acyl carrier protein	NA	B2ZXV3	Ralstonia_phage	46.6	5.4e-11
WP_003813819.1|2552309_2553062_-	3-oxoacyl-ACP reductase FabG	NA	Q06VL0	Trichoplusia_ni_ascovirus	31.3	6.9e-12
WP_010930934.1|2553063_2553999_-	ACP S-malonyltransferase	NA	NA	NA	NA	NA
WP_010930935.1|2554080_2555067_-	ketoacyl-ACP synthase III	NA	NA	NA	NA	NA
WP_003821347.1|2555066_2556125_-	phosphate acyltransferase PlsX	NA	NA	NA	NA	NA
WP_003813827.1|2556181_2556364_-	50S ribosomal protein L32	NA	NA	NA	NA	NA
WP_010930936.1|2556415_2557009_-	DUF177 domain-containing protein	NA	NA	NA	NA	NA
WP_003821345.1|2557117_2557717_+	septum formation protein Maf	NA	NA	NA	NA	NA
WP_010930937.1|2557713_2558424_+	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_010930938.1|2558425_2559253_+	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA	NA
WP_003814009.1|2561069_2562311_-	MFS transporter	NA	NA	NA	NA	NA
WP_003814010.1|2562322_2563096_-	peroxide stress protein YaaA	NA	NA	NA	NA	NA
WP_005012067.1|2563122_2564073_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814011.1|2564171_2564954_-	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003814012.1|2565042_2566269_-	transporter	NA	NA	NA	NA	NA
WP_003814013.1|2566994_2568380_+	alcaligin siderophore biosynthesis protein AlcA	NA	NA	NA	NA	NA
WP_003814014.1|2568398_2569004_+	alcaligin siderophore biosynthesis protein AlcB	NA	NA	NA	NA	NA
WP_010930939.1|2569000_2570857_+	alcaligin siderophore biosynthesis protein AlcC	NA	NA	NA	NA	NA
WP_003814016.1|2570853_2571654_+	alcaligin siderophore biosynthesis protein AlcD	NA	NA	NA	NA	NA
WP_005013753.1|2571668_2572862_+	alcaligin siderophore biosynthesis protein AlcE	NA	NA	NA	NA	NA
WP_003814017.1|2572929_2573904_+	alcaligin siderophore biosynthesis transcriptional regulator AlcR	NA	NA	NA	NA	NA
WP_010930940.1|2574026_2575250_+	alcaligin siderophore export MFS transporter Bcr	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
WP_010930941.1|2575360_2577565_+	TonB-dependent alcaligin siderophore receptor FauA	NA	NA	NA	NA	NA
WP_003814020.1|2577859_2578519_+	NAAT family transporter	NA	NA	NA	NA	NA
WP_019247690.1|2578526_2578733_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814021.1|2579071_2579827_+	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_003814023.1|2580097_2580613_+	hypothetical protein	NA	T1SAR8	Salmonella_phage	44.6	5.1e-06
WP_003814024.1|2580885_2581203_+	virulence factor	NA	NA	NA	NA	NA
WP_005014990.1|2581390_2581627_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930944.1|2581917_2583273_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
WP_010930945.1|2583319_2584660_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
WP_010930946.1|2584761_2585394_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_010930947.1|2585393_2587763_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
WP_010930948.1|2587795_2588755_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
WP_010929073.1|2588741_2589428_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005015014.1|2589424_2589757_+	multidrug transporter	NA	NA	NA	NA	NA
WP_005012067.1|2589872_2590823_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|2590921_2591872_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814040.1|2591868_2593935_-	cation acetate symporter	NA	NA	NA	NA	NA
WP_003814042.1|2593934_2594207_-	DUF4212 domain-containing protein	NA	NA	NA	NA	NA
WP_017685545.1|2594901_2594991_+	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_010930949.1|2594990_2596775_+	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA	NA
WP_010930950.1|2596798_2598964_+	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	27.1	1.2e-24
WP_003814050.1|2598974_2599574_+	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
WP_003814052.1|2602395_2603091_+	two-component system response regulator KdpE	NA	NA	NA	NA	NA
WP_005013747.1|2603099_2604050_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
NZ_CP011705	Bordetella pertussis strain H842 chromosome, complete genome	4111642	2690167	2730836	4111642	tRNA,transposase	Salmonella_phage(33.33%)	42	NA	NA
WP_010929591.1|2690167_2691118_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004567479.1|2691228_2691411_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931004.1|2691510_2692107_-	lipoprotein	NA	NA	NA	NA	NA
WP_010931005.1|2692290_2693382_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003812822.1|2693881_2694292_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852697.1|2694350_2694680_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	42.2	2.7e-13
WP_010931007.1|2694697_2697115_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_010926359.1|2697127_2698150_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	38.6	1.0e-26
WP_003812832.1|2698224_2698584_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_003812834.1|2698599_2698797_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_010929584.1|2699132_2700083_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816756.1|2700277_2700727_+	dUTP diphosphatase	NA	S4TNT3	Salmonella_phage	67.2	3.7e-45
WP_005012808.1|2700723_2701674_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931008.1|2701784_2703233_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_023853496.1|2703347_2703593_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2703732_2704683_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820420.1|2704927_2705641_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_019247724.1|2705763_2705991_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003816758.1|2706285_2706924_-	DedA family protein	NA	NA	NA	NA	NA
WP_010931011.1|2707032_2708067_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_010929591.1|2708063_2709014_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931012.1|2709429_2709954_-	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
WP_004567322.1|2709957_2710227_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931013.1|2710425_2711487_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931014.1|2711570_2713205_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
WP_010931015.1|2713206_2714010_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931016.1|2714038_2714998_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931017.1|2715001_2716516_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248147.1|2716552_2717557_-	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931018.1|2717988_2718459_-	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
WP_010931019.1|2718494_2719106_-	LysE family translocator	NA	NA	NA	NA	NA
WP_010931020.1|2719136_2719760_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_010931021.1|2719840_2721373_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_023853282.1|2721407_2722625_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931023.1|2722692_2723724_-	alcohol dehydrogenase catalytic domain-containing protein	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
WP_010931024.1|2723720_2724890_-	NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_010931025.1|2724883_2725564_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931026.1|2725725_2726568_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931027.1|2726730_2727702_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931028.1|2727873_2728752_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931029.1|2728774_2729845_-	FUSC family protein	NA	NA	NA	NA	NA
WP_005013747.1|2729885_2730836_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NZ_CP011705	Bordetella pertussis strain H842 chromosome, complete genome	4111642	2786301	2859171	4111642	tRNA,transposase	Moraxella_phage(16.67%)	58	NA	NA
WP_003810909.1|2786301_2786718_-|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931061.1|2786828_2787461_+	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA	NA
WP_010931062.1|2787489_2787933_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_003810897.1|2787954_2789046_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931063.1|2789100_2789901_-	aldolase	NA	NA	NA	NA	NA
WP_010931064.1|2790036_2790657_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931065.1|2790796_2791270_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|2792409_2793360_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931066.1|2793356_2801018_-	filamentous hemagglutinin N-terminal domain-containing protein	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
WP_010931067.1|2801258_2805305_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
WP_003816847.1|2805617_2806199_+	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010931068.1|2806195_2807494_+	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010931069.1|2807573_2808602_+	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010931070.1|2808862_2809813_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|2809809_2810760_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931071.1|2811076_2811682_+	fimbrial protein	NA	NA	NA	NA	NA
WP_010931072.1|2811735_2813049_-	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
WP_003813284.1|2813123_2813594_-	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA	NA
WP_010931073.1|2813593_2814382_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
WP_010931074.1|2814392_2816045_-	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA	NA
WP_010929591.1|2816132_2817083_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931075.1|2818244_2818751_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA	NA
WP_003813293.1|2818747_2819512_-	phenylacetate-CoA oxygenase subunit PaaC	NA	NA	NA	NA	NA
WP_010931076.1|2819527_2819812_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA	NA
WP_003813298.1|2819876_2820866_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
WP_010931077.1|2821037_2821967_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA	NA
WP_003813302.1|2821938_2822625_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
WP_003813303.1|2822658_2823204_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	37.7	2.1e-26
WP_003813306.1|2823248_2824514_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003813309.1|2824510_2825413_+	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA	NA
WP_019247679.1|2826594_2827539_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931079.1|2827633_2829151_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931080.1|2829192_2830821_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_003811986.1|2830928_2831810_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931081.1|2834922_2835297_+	endonuclease	NA	F4YXR7	Roseobacter_phage	54.4	2.1e-25
WP_003812004.1|2835321_2835660_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931082.1|2835703_2837338_-	NAD+ synthase	NA	A0A2L0UZF5	Agrobacterium_phage	36.6	8.3e-87
WP_010931083.1|2837376_2838723_-	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_003812010.1|2838830_2840252_+	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_010931084.1|2840321_2840906_-	nitroreductase	NA	NA	NA	NA	NA
WP_005012067.1|2841008_2841959_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931085.1|2842093_2843200_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010931086.1|2843210_2844308_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
WP_010931087.1|2844452_2845658_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_010931088.1|2845664_2846186_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA	NA
WP_023853551.1|2846182_2846665_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
WP_003819740.1|2846670_2846922_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
WP_003819741.1|2846902_2847388_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
WP_010931090.1|2847523_2850985_+	DUF748 domain-containing protein	NA	NA	NA	NA	NA
WP_010931091.1|2851002_2851887_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
WP_010931092.1|2851896_2852328_-	lipoprotein	NA	NA	NA	NA	NA
WP_003809348.1|2852574_2853078_+	peroxiredoxin	NA	M1I839	Pelagibacter_phage	44.1	1.8e-24
WP_010931094.1|2853155_2854556_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931095.1|2854630_2855506_-	membrane protein	NA	NA	NA	NA	NA
WP_023853546.1|2855502_2856510_-	biotin synthase BioB	NA	NA	NA	NA	NA
WP_010931097.1|2856977_2857283_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003819753.1|2857373_2857964_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930525.1|2858154_2859171_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 24
NZ_CP011705	Bordetella pertussis strain H842 chromosome, complete genome	4111642	2862314	2929125	4111642	transposase,protease	uncultured_Mediterranean_phage(28.57%)	50	NA	NA
WP_023995489.1|2862314_2863265_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2863363_2864314_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931099.1|2864310_2865105_-	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_010931100.1|2865136_2865841_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931101.1|2865915_2866716_-	SURF1 family protein	NA	NA	NA	NA	NA
WP_003809276.1|2866712_2867120_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_003819722.1|2867116_2867758_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_010931102.1|2867750_2869751_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_010931103.1|2871011_2872343_+	MFS transporter	NA	NA	NA	NA	NA
WP_005012067.1|2872339_2873290_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931105.1|2874996_2875263_-	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_003812839.1|2875970_2876309_+	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931107.1|2880862_2881465_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931108.1|2881561_2882851_+	MFS transporter	NA	NA	NA	NA	NA
WP_003812846.1|2882908_2883640_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931109.1|2883636_2884440_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812851.1|2884436_2885525_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|2885521_2886451_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812857.1|2886599_2887745_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930800.1|2887766_2888717_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154698391.1|2888734_2888893_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931110.1|2889047_2892869_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010931111.1|2893025_2893694_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_014905522.1|2893698_2895372_-	MCE family protein	NA	NA	NA	NA	NA
WP_003820402.1|2895390_2896710_-	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_010931114.1|2896714_2899030_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.1e-164
WP_010931115.1|2899085_2901254_-	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_023853340.1|2901250_2906431_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_003820400.1|2906529_2906844_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_003812875.1|2907071_2907317_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820399.1|2907411_2907930_+	hypothetical protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_010931117.1|2908029_2909235_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_019247560.1|2909350_2910748_-	chloride channel protein	NA	NA	NA	NA	NA
WP_010931119.1|2910864_2911443_-	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_010931120.1|2911515_2912907_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_005012067.1|2913074_2914025_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812889.1|2914305_2914926_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_010931122.1|2914922_2915336_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_010931123.1|2915332_2916376_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_003812895.1|2916431_2916620_+	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931124.1|2916629_2917394_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_010931125.1|2917484_2918141_+	adenylate kinase	NA	NA	NA	NA	NA
WP_010931126.1|2918232_2918991_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931127.1|2919016_2920618_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931128.1|2920818_2921823_+	DUF4880 domain-containing protein	NA	NA	NA	NA	NA
WP_003812908.1|2921923_2922187_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931129.1|2922304_2923081_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_005012067.1|2923671_2924622_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931130.1|2927005_2928118_-	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_005012808.1|2928174_2929125_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 25
NZ_CP011705	Bordetella pertussis strain H842 chromosome, complete genome	4111642	2959511	2998700	4111642	transposase	Planktothrix_phage(50.0%)	37	NA	NA
WP_005012067.1|2959511_2960462_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268686.1|2960479_2960629_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023852715.1|2960582_2961479_-	inositol monophosphatase	NA	NA	NA	NA	NA
WP_003814547.1|2963756_2965982_+	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_003814544.1|2966146_2967235_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_019247918.1|2967191_2967845_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931144.1|2967892_2968690_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930176.1|2969221_2970172_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994659.1|2970252_2971401_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|2971457_2972408_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814535.1|2972506_2972812_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_003820797.1|2972840_2973275_-	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_010931147.1|2973276_2974521_-	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003820799.1|2974517_2975228_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_033446288.1|2975242_2976154_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931149.1|2976516_2976921_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247890.1|2976917_2977376_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247891.1|2977382_2978291_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931150.1|2978287_2979154_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_003814524.1|2979140_2979968_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003820806.1|2979978_2981106_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_023852748.1|2982183_2983422_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931152.1|2983463_2984726_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010931153.1|2984732_2985485_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_019248355.1|2985536_2985722_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003820813.1|2985997_2986462_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_003820814.1|2986493_2987153_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_010931154.1|2987297_2989406_+	AsmA family protein	NA	NA	NA	NA	NA
WP_023852714.1|2989402_2990353_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931155.1|2990456_2991077_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003820818.1|2991180_2991921_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019248356.1|2993055_2994180_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247402.1|2994225_2994594_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2994835_2995786_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247492.1|2996821_2997364_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023998107.1|2997561_2997732_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2997749_2998700_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 27
NZ_CP011705	Bordetella pertussis strain H842 chromosome, complete genome	4111642	3384197	3504442	4111642	tRNA,transposase	Acinetobacter_phage(20.0%)	99	NA	NA
WP_023995489.1|3384197_3385148_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931336.1|3385552_3386197_-	urease accessory protein UreG	NA	NA	NA	NA	NA
WP_019247677.1|3386221_3386806_-	urease accessory protein UreF	NA	NA	NA	NA	NA
WP_014905506.1|3386906_3387524_-	urease accessory protein UreE	NA	NA	NA	NA	NA
WP_010931337.1|3387526_3389242_-	urease subunit alpha	NA	NA	NA	NA	NA
WP_010931338.1|3389238_3389547_-	urease subunit beta	NA	NA	NA	NA	NA
WP_003814828.1|3389563_3390181_-	HupE/UreJ family protein	NA	NA	NA	NA	NA
WP_010931340.1|3390225_3390528_-	urease subunit gamma	NA	NA	NA	NA	NA
WP_003814832.1|3390628_3391483_-	urease accessory protein UreD	NA	NA	NA	NA	NA
WP_124740609.1|3391670_3391895_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929281.1|3392064_3392337_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_010929282.1|3392754_3393162_-	GFA family protein	NA	NA	NA	NA	NA
WP_010931341.1|3393531_3394326_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010927102.1|3394426_3395662_+	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003814852.1|3395730_3396747_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931342.1|3396758_3398135_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003814856.1|3398131_3399328_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814858.1|3399324_3400863_-	SpoVR family protein	NA	NA	NA	NA	NA
WP_010931343.1|3400859_3402119_-	YeaH/YhbH family protein	NA	NA	NA	NA	NA
WP_005012067.1|3404059_3405010_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931344.1|3405776_3406871_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247312.1|3406863_3408198_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_003808193.1|3408151_3408835_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003808195.1|3408860_3410024_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_004566224.1|3410020_3411022_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931346.1|3411021_3411894_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931347.1|3411890_3412640_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931348.1|3412636_3413428_-	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931349.1|3413424_3414564_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_047122778.1|3414839_3415625_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486103.1|3415658_3416441_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_010931351.1|3416444_3416834_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931352.1|3417973_3418837_+	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931353.1|3418872_3419961_+	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_005013747.1|3419957_3420908_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247959.1|3421261_3424240_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003818344.1|3425166_3426045_+	fatty acid desaturase	NA	NA	NA	NA	NA
WP_005012067.1|3427009_3427960_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|3429042_3429993_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931354.1|3429989_3430457_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_010931355.1|3430499_3431270_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_010927090.1|3431290_3432091_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931356.1|3432101_3433511_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_003814739.1|3433605_3434391_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931561.1|3434630_3435647_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814742.1|3435754_3436147_-	OsmC family protein	NA	NA	NA	NA	NA
WP_010931357.1|3436284_3436965_+	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_023994844.1|3436969_3437941_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930179.1|3438036_3438987_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814239.1|3440491_3441193_+	response regulator	NA	W8CYM9	Bacillus_phage	36.6	5.6e-32
WP_010927010.1|3441192_3442617_+	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_010931361.1|3443686_3445027_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_003820957.1|3445142_3446906_+|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
WP_010931362.1|3447017_3447896_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003814250.1|3448008_3448824_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_003814252.1|3448827_3449079_+	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_010929632.1|3449163_3450180_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814254.1|3450510_3450732_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_019247693.1|3453092_3454010_-	DMT family transporter	NA	NA	NA	NA	NA
WP_019247692.1|3454507_3455716_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931365.1|3455795_3457367_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814275.1|3457484_3458420_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_003814277.1|3458608_3459553_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
WP_003814283.1|3460120_3465838_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
WP_010931367.1|3465843_3466971_+	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
WP_003814287.1|3467026_3467653_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|3467924_3468941_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010927020.1|3469036_3469747_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931368.1|3469743_3470733_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931369.1|3470828_3472460_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931370.1|3472462_3473200_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247745.1|3473355_3474228_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_023852703.1|3474577_3475717_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814300.1|3475713_3476373_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_003814302.1|3476444_3477077_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_010931372.1|3477106_3477625_+	flavin reductase family protein	NA	NA	NA	NA	NA
WP_010931373.1|3477635_3478745_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003814312.1|3478791_3479646_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931374.1|3479647_3480550_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3481772_3482723_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997720.1|3484479_3485469_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931375.1|3485644_3486433_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_003817833.1|3486429_3487461_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_003815390.1|3487479_3488043_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_010931376.1|3488098_3489619_-	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_010931377.1|3489882_3490587_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_023852620.1|3490594_3491323_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_003815381.1|3491437_3491812_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003815379.1|3491854_3493144_+	murein transglycosylase A	NA	NA	NA	NA	NA
WP_010931378.1|3493140_3494310_+	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_010931379.1|3494306_3495146_+	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931380.1|3495205_3496141_+	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_005012067.1|3496153_3497104_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931381.1|3497202_3498165_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_003817821.1|3498196_3498556_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931382.1|3498680_3499583_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_010931383.1|3499584_3501357_-	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_003815367.1|3501391_3502168_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_023852617.1|3503491_3504442_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 28
NZ_CP011705	Bordetella pertussis strain H842 chromosome, complete genome	4111642	3519380	3577453	4111642	tRNA,transposase	Planktothrix_phage(12.5%)	47	NA	NA
WP_005012808.1|3519380_3520331_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931392.1|3520459_3521593_-	M20 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931393.1|3521636_3522542_-	hydrolase	NA	NA	NA	NA	NA
WP_023852622.1|3522544_3524245_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	1.0e-15
WP_010931394.1|3524241_3525162_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003817805.1|3525169_3526147_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931395.1|3526205_3527240_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003815317.1|3529214_3529451_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931396.1|3529577_3530441_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_003815315.1|3530529_3531351_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003815313.1|3531430_3532168_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931397.1|3532164_3533157_-	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_010931398.1|3533309_3533933_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931399.1|3533977_3535126_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931400.1|3537449_3538400_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486105.1|3538740_3539691_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|3539789_3540740_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443756.1|3541036_3541534_+	cupredoxin family protein	NA	NA	NA	NA	NA
WP_010931403.1|3541576_3543352_+	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
WP_010931404.1|3543359_3544226_+	copper resistance protein B	NA	NA	NA	NA	NA
WP_019249391.1|3544232_3544967_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931406.1|3546136_3546931_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815296.1|3547220_3547811_+	cysteine dioxygenase	NA	NA	NA	NA	NA
WP_010931407.1|3547844_3549173_-	amidase	NA	NA	NA	NA	NA
WP_010931408.1|3549247_3550393_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014905478.1|3550504_3551503_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446233.1|3551465_3551900_+	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
WP_010929974.1|3553416_3554301_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929973.1|3554297_3555503_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010929972.1|3555499_3556360_-	endonuclease	NA	NA	NA	NA	NA
WP_003807038.1|3556472_3558263_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
WP_033446243.1|3558303_3558948_-	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	8.5e-11
WP_010929971.1|3558969_3559278_-	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929970.1|3559443_3560730_-	membrane protein	NA	NA	NA	NA	NA
WP_010929969.1|3562163_3563114_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929968.1|3565065_3566280_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_003815171.1|3566385_3567375_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
WP_003815172.1|3567371_3567980_+	HAD-IIIA family hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
WP_010929967.1|3567992_3568622_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_003815175.1|3568618_3569239_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_003815177.1|3569270_3570062_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
WP_010929966.1|3570913_3571369_+	PTS transporter subunit EIIA	NA	NA	NA	NA	NA
WP_010929965.1|3571387_3572314_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_010929964.1|3572367_3573654_-	cytochrome c	NA	NA	NA	NA	NA
WP_003815183.1|3574584_3575457_+	RNase adapter RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
WP_010929963.1|3575453_3576404_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
WP_005012067.1|3576502_3577453_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 30
NZ_CP011705	Bordetella pertussis strain H842 chromosome, complete genome	4111642	4010710	4075622	4111642	transposase	Planktothrix_phage(40.0%)	60	NA	NA
WP_039249574.1|4010710_4011196_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_153302797.1|4011284_4011422_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931647.1|4011414_4012395_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019248461.1|4012661_4013471_+	pertussis toxin ADP-ribosyltransferase subunit PtxA	NA	NA	NA	NA	NA
WP_014906114.1|4013510_4014191_+	pertussis toxin binding subunit PtxB	NA	NA	NA	NA	NA
WP_010929491.1|4014184_4014643_+	pertussis toxin subunit 4	NA	NA	NA	NA	NA
WP_023853616.1|4014654_4015017_+	pertussis toxin binding subunit PtxD	NA	NA	NA	NA	NA
WP_010931651.1|4015099_4015783_+	pertussis toxin binding subunit PtxE	NA	NA	NA	NA	NA
WP_010929493.1|4015838_4016147_+	type IV secretion system protein PtlA	NA	NA	NA	NA	NA
WP_010929494.1|4016165_4016480_+	type IV secretion system protein PtlB	NA	NA	NA	NA	NA
WP_010931652.1|4016476_4018951_+	type IV secretion system protein PtlC	NA	NA	NA	NA	NA
WP_010931653.1|4018958_4020350_+	type IV secretion system protein PtlD	NA	NA	NA	NA	NA
WP_010929497.1|4020346_4020532_+	type IV secretion system protein PtlI	NA	NA	NA	NA	NA
WP_010929498.1|4020510_4021212_+	type IV secretion system peptidoglycanase PtlE	NA	NA	NA	NA	NA
WP_010931654.1|4021208_4022030_+	type IV secretion system protein PtlF	NA	NA	NA	NA	NA
WP_010931655.1|4022010_4023135_+	type IV secretion system protein PtlG	NA	NA	NA	NA	NA
WP_010929500.1|4023127_4024147_+	type IV secretion system protein PtlH	NA	NA	NA	NA	NA
WP_010931656.1|4024352_4025243_-	DMT family transporter	NA	NA	NA	NA	NA
WP_010929501.1|4025487_4026279_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003815873.1|4026361_4026736_+	DUF1232 domain-containing protein	NA	NA	NA	NA	NA
WP_010931658.1|4026713_4028123_+	DUF2868 domain-containing protein	NA	NA	NA	NA	NA
WP_003815876.1|4028115_4029498_+	GTPase/DUF3482 domain-containing protein	NA	A0A0R6PHS5	Moraxella_phage	38.9	9.9e-57
WP_003815878.1|4029832_4031437_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931659.1|4031514_4032486_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931660.1|4032496_4033423_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931661.1|4033813_4034764_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931662.1|4034933_4036160_+	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA	NA	NA	NA	NA
WP_010931663.1|4036359_4037226_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_003815027.1|4037218_4038181_+	Nudix family hydrolase	NA	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	53.4	1.9e-06
WP_010927663.1|4038281_4039232_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|4039330_4040281_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|4040379_4041330_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994937.1|4041326_4042820_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_003815032.1|4042816_4045924_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931665.1|4045920_4048989_-	MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931666.1|4048985_4050236_-	MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_023853184.1|4050416_4051169_-	cell division protein ZapD	NA	NA	NA	NA	NA
WP_010931667.1|4051210_4051855_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_010931668.1|4051863_4052844_-	prepilin peptidase	NA	NA	NA	NA	NA
WP_003815047.1|4052943_4053687_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815049.1|4053769_4054117_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003815051.1|4054214_4055057_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_003815053.1|4055101_4055989_-	segregation/condensation protein A	NA	NA	NA	NA	NA
WP_003815055.1|4056015_4056204_-	DUF3460 family protein	NA	NA	NA	NA	NA
WP_010931669.1|4056301_4057759_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_010931670.1|4057745_4059272_+	glycerol kinase GlpK	NA	NA	NA	NA	NA
WP_003815061.1|4059290_4059758_-	membrane protein	NA	NA	NA	NA	NA
WP_010931671.1|4059757_4060780_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003815064.1|4060900_4061641_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	4.4e-35
WP_003815066.1|4061695_4062796_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815068.1|4062797_4063988_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815070.1|4064107_4065124_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	42.1	1.0e-71
WP_003815073.1|4065442_4066114_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	38.2	9.5e-29
WP_010927126.1|4066110_4067019_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_010931672.1|4067230_4067878_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA	NA
WP_033446142.1|4071738_4072806_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
WP_003815084.1|4072816_4073626_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815086.1|4073715_4074489_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_023853189.1|4074489_4074654_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930363.1|4074671_4075622_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
