The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP013081	Bordetella pertussis strain E602 chromosome, complete genome	4108490	0	59497	4108490	transposase,tRNA	Natrialba_phage(12.5%)	53	NA	NA
WP_010929569.1|0_1920_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
WP_003806878.1|1916_2609_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA	NA
WP_003806879.1|2605_3403_+	ParA family protein	NA	Q8JL10	Natrialba_phage	34.9	5.6e-20
WP_010929570.1|3409_4171_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010929571.1|4214_5132_+	ParB/RepB/Spo0J family partition protein	NA	I3NLC2	Bifidobacterium_phage	38.1	1.9e-16
WP_019247667.1|5124_5910_+	asparaginase	NA	NA	NA	NA	NA
WP_019247666.1|5943_6126_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003806883.1|6721_7912_+	elongation factor Tu	NA	A0A1V0SLW6	Klosneuvirus	29.2	3.1e-14
WP_003806884.1|8150_8531_+	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
WP_003806885.1|8540_9074_+	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	30.5	1.4e-11
WP_010929572.1|9137_9569_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
WP_003806887.1|9571_10270_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
WP_003806888.1|10512_11037_+	50S ribosomal protein L10	NA	NA	NA	NA	NA
WP_003806889.1|11118_11502_+	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
WP_010929573.1|11661_15774_+	DNA-directed RNA polymerase subunit beta	NA	A0A0N9R0J7	Chrysochromulina_ericina_virus	28.8	2.4e-21
WP_003818292.1|15773_20018_+	DNA-directed RNA polymerase subunit beta'	NA	A0A2I7QNZ7	Vibrio_phage	24.7	3.5e-68
WP_010929574.1|20126_20531_-	TssQ family T6SS-associated lipoprotein	NA	NA	NA	NA	NA
WP_010929575.1|20771_21947_+	membrane protein	NA	NA	NA	NA	NA
WP_010929576.1|24352_25459_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
WP_003818297.1|26470_27286_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_010930363.1|27282_28233_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995007.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929578.1|28674_29109_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247164.1|29141_30359_-	thiolase family protein	NA	NA	NA	NA	NA
WP_010929580.1|30364_30862_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_019247165.1|31069_32005_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929582.1|32214_33006_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929583.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_005012808.1|34625_35576_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929584.1|35674_36625_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814398.1|36621_37812_-	MFS transporter	NA	NA	NA	NA	NA
WP_010929585.1|38061_38973_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010929586.1|38974_41113_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003814404.1|41109_41649_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|41652_42381_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|42367_43261_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247766.1|43331_43727_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|43736_44267_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_023852754.1|44395_44695_-	DUF1974 domain-containing protein	NA	NA	NA	NA	NA
WP_010929588.1|44712_45663_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929589.1|46249_46798_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|46769_47006_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|47133_48027_+	membrane protein	NA	NA	NA	NA	NA
WP_010929590.1|49196_50444_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|50440_51055_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_010929591.1|51190_52141_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443813.1|52183_53440_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|54671_55406_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|55411_56002_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|56026_56716_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|56712_57474_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|57553_58453_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|58546_59497_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP013081	Bordetella pertussis strain E602 chromosome, complete genome	4108490	70134	123122	4108490	transposase,tRNA	Planktothrix_phage(20.0%)	50	NA	NA
WP_005012808.1|70134_71085_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816713.1|71178_71493_+	DUF1153 domain-containing protein	NA	NA	NA	NA	NA
WP_010929604.1|72685_74593_+	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	37.2	1.1e-117
WP_010929605.1|74754_75375_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_003807804.1|75406_75988_-	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA	A0A1W6DX33	Sphingobium_phage	54.3	1.7e-05
WP_003807805.1|76076_76328_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929606.1|76329_77172_-	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA	NA
WP_010929607.1|77277_78687_+	signal recognition particle protein	NA	NA	NA	NA	NA
WP_005012067.1|78683_79634_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166334.1|79708_80653_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929608.1|80649_82524_-	polysaccharide biosynthesis protein	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
WP_003807102.1|83871_84576_-	DUF2837 family protein	NA	NA	NA	NA	NA
WP_003807104.1|84572_85679_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010929610.1|85940_86534_-	sugar transferase	NA	NA	NA	NA	NA
WP_023853419.1|86530_87718_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	NA	NA	NA	NA
WP_010929612.1|87780_89040_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010929613.1|89063_90152_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
WP_010929614.1|90159_91260_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
WP_003807114.1|91263_91839_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_003807115.1|91842_92895_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_010929615.1|93025_94033_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
WP_010929616.1|94034_95321_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
WP_010929617.1|95517_96321_-	type III pantothenate kinase	NA	NA	NA	NA	NA
WP_010929618.1|96317_97184_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_010929619.1|97258_98389_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003807131.1|98388_99228_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
WP_010929620.1|100160_100763_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929621.1|100792_101446_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003807138.1|101578_102835_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
WP_023853421.1|102915_103782_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_003818417.1|103857_104133_+	YbeD family protein	NA	NA	NA	NA	NA
WP_010929623.1|104140_104803_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
WP_003807146.1|104864_105866_+	lipoyl synthase	NA	NA	NA	NA	NA
WP_003807148.1|105880_106429_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
WP_010929624.1|106486_107383_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_010929625.1|107379_108441_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
WP_010929626.1|108476_109427_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929627.1|110326_111520_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_010929628.1|111601_112231_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_010927242.1|112292_112976_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_023853376.1|112985_114668_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003815933.1|114955_115303_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
WP_003815930.1|115393_115711_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|115993_117010_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815929.1|117085_117886_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003815927.1|117882_118758_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010929633.1|118768_120061_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929634.1|120103_121144_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
WP_010929635.1|121249_122071_-	phosphodiesterase	NA	NA	NA	NA	NA
WP_005012067.1|122171_123122_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP013081	Bordetella pertussis strain E602 chromosome, complete genome	4108490	165942	226465	4108490	transposase,protease,tRNA	Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)	51	NA	NA
WP_010930800.1|165942_166893_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929659.1|168336_169239_-	YgcG family protein	NA	NA	NA	NA	NA
WP_003815889.1|169216_169846_-	LemA family protein	NA	NA	NA	NA	NA
WP_010929660.1|170128_171559_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.8	5.8e-44
WP_010929661.1|171592_172222_+	LysE family transporter	NA	NA	NA	NA	NA
WP_003815895.1|172270_173878_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
WP_010929663.1|173902_174586_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815898.1|174667_175144_-	bacterioferritin	NA	NA	NA	NA	NA
WP_010929591.1|175350_176301_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929664.1|177416_177944_+	META domain-containing protein	NA	NA	NA	NA	NA
WP_010929665.1|178035_178851_+	META and DUF4377 domain-containing protein	NA	NA	NA	NA	NA
WP_003808370.1|178911_179646_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_010929666.1|179683_181762_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
WP_003808374.1|182011_182284_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446322.1|182385_183471_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010929668.1|183474_185379_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA	NA
WP_023999174.1|185375_189062_+	DUF490 domain-containing protein	NA	NA	NA	NA	NA
WP_010929670.1|189122_189686_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
WP_003808385.1|189693_190116_-	glyoxalase	NA	NA	NA	NA	NA
WP_010929671.1|190143_190563_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_077274090.1|190591_191038_-	GNAT family N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	29.4	1.2e-08
WP_003808391.1|191164_191662_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003808393.1|191816_194087_+	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA	NA
WP_019249381.1|194162_195368_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010929591.1|195466_196417_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929673.1|196519_197155_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.8e-83
WP_019248671.1|197151_198045_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_010929675.1|198439_199540_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_010929676.1|199621_199996_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_010929677.1|200055_202920_+	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
WP_010929678.1|203064_203805_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929679.1|203874_205086_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929680.1|205114_206083_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005013747.1|206696_207647_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929699.1|207803_208127_+	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
WP_023853200.1|208231_209272_-	cyclase	NA	NA	NA	NA	NA
WP_010929697.1|209277_210057_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
WP_003807672.1|210102_210399_-	YciI family protein	NA	NA	NA	NA	NA
WP_003807674.1|210424_210700_-	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
WP_003819086.1|210756_211401_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010929696.1|211400_212087_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_033446325.1|212285_213068_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929694.1|213118_213844_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929693.1|213875_215225_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929692.1|215336_216269_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_033446404.1|216726_219522_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
WP_023994893.1|220115_222959_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_010929689.1|223129_223849_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_010929688.1|223887_224436_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929687.1|224590_225490_+	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_005012808.1|225514_226465_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP013081	Bordetella pertussis strain E602 chromosome, complete genome	4108490	234397	287985	4108490	transposase,protease,tRNA	Bacillus_phage(25.0%)	47	NA	NA
WP_005012067.1|234397_235348_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|235434_236385_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|236381_237332_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929700.1|237430_238228_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003814363.1|239177_239588_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA	NA
WP_003814358.1|240609_241353_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814356.1|241396_242440_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814355.1|242610_244713_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_003814351.1|246123_247080_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929701.1|247098_247590_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_010929702.1|247586_248942_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
WP_010929703.1|248942_249641_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_010929704.1|249637_250339_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_003814339.1|250591_251641_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
WP_003814337.1|251746_252688_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_010929705.1|252684_254574_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
WP_003814332.1|254660_255299_+	membrane protein	NA	NA	NA	NA	NA
WP_019247543.1|255441_256827_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
WP_010929706.1|256757_257294_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_010929707.1|257445_258837_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_010929708.1|258853_259834_-	AEC family transporter	NA	NA	NA	NA	NA
WP_003814324.1|259969_260953_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
WP_010929709.1|261017_261917_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814321.1|262023_263778_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_010929710.1|263785_264910_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929711.1|264923_265904_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|266634_267585_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929712.1|268144_268690_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852659.1|268815_270393_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004567834.1|270408_271563_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_003817696.1|271576_271702_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_010929714.1|271698_273450_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
WP_010929715.1|273446_275126_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
WP_010929716.1|275188_275737_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.3e-28
WP_010929717.1|276879_277158_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|278201_279152_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077068974.1|279138_279354_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929718.1|279429_279591_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_003815821.1|280257_280707_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
WP_003815819.1|280716_281328_-	stringent starvation protein A	NA	NA	NA	NA	NA
WP_010929720.1|281486_282335_-	cytochrome c1	NA	NA	NA	NA	NA
WP_003815816.1|282360_283743_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_003815815.1|283807_284449_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_010929721.1|284588_285047_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_010927226.1|285071_285848_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_014906092.1|285901_287038_+|protease	trypsin-like serine protease	protease	W5SAB9	Pithovirus	31.2	1.2e-07
WP_005015810.1|287034_287985_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP013081	Bordetella pertussis strain E602 chromosome, complete genome	4108490	391918	449427	4108490	transposase	Orpheovirus(14.29%)	50	NA	NA
WP_005012067.1|391918_392869_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927231.1|393005_393923_+	reductase	NA	NA	NA	NA	NA
WP_003815842.1|393919_394168_+	glutaredoxin family protein	NA	NA	NA	NA	NA
WP_003815840.1|394164_395370_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486045.1|395442_396438_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486046.1|396460_397681_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486047.1|397677_398322_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248476.1|400052_400862_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486048.1|401166_402120_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	42.5	5.6e-59
WP_077069043.1|402218_403202_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486050.1|403128_403830_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486051.1|403878_404649_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_019247259.1|404645_405824_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486052.1|405991_407698_-	thiamine pyrophosphate-requiring protein	NA	NA	NA	NA	NA
WP_014486053.1|407694_408591_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486054.1|408631_410221_-	sulfurtransferase	NA	NA	NA	NA	NA
WP_003807867.1|410270_411263_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807865.1|411331_411931_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014486055.1|412391_413372_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929577.1|413447_414398_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122777.1|414486_415401_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929782.1|415397_416057_+	LysE family translocator	NA	NA	NA	NA	NA
WP_003814709.1|416146_417070_+	alpha/beta fold hydrolase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	27.2	4.8e-07
WP_010929783.1|417075_417531_-	multidrug/biocide efflux PACE transporter	NA	NA	NA	NA	NA
WP_010929784.1|417527_418631_-	ChbG/HpnK family deacetylase	NA	NA	NA	NA	NA
WP_157734664.1|418586_418859_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010927086.1|418818_420438_-	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_003814720.1|420434_421493_-	glycosyltransferase family 2 protein	NA	I1TED8	Salmonella_phage	40.5	2.8e-59
WP_033446199.1|421622_422117_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_022997984.1|422209_423187_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929785.1|423382_424588_+	sodium/glutamate symporter	NA	NA	NA	NA	NA
WP_010929786.1|424584_426096_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_003814726.1|426111_427425_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_003814728.1|427615_427795_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814730.1|428204_428939_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
WP_010929577.1|431383_432334_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247421.1|432465_432864_-	GTP-binding protein	NA	E4ZFJ7	Streptococcus_phage	44.3	9.0e-19
WP_003814701.1|433274_433745_-	universal stress protein	NA	NA	NA	NA	NA
WP_003820700.1|433833_434178_-	TIGR01244 family phosphatase	NA	NA	NA	NA	NA
WP_010929788.1|434277_435678_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010929789.1|437466_437985_-	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	38.9	2.1e-12
WP_003814694.1|438095_438851_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	40.8	2.9e-42
WP_003814691.1|439046_440279_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929791.1|440271_441057_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_003814685.1|441123_442095_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003814681.1|442105_443083_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247419.1|443208_444381_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010929793.1|444407_445436_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003814674.1|445501_446695_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_005012067.1|448476_449427_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
NZ_CP013081	Bordetella pertussis strain E602 chromosome, complete genome	4108490	591481	652671	4108490	transposase,protease	uncultured_Mediterranean_phage(40.0%)	55	NA	NA
WP_005013747.1|591481_592432_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446133.1|592907_593798_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_010931496.1|593794_594616_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_019247235.1|594814_595306_+	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_019247236.1|595324_596398_+	CHAD domain-containing protein	NA	NA	NA	NA	NA
WP_023853086.1|596444_597548_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
WP_003808577.1|597623_598244_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_003808574.1|598264_598774_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	42.1	1.2e-28
WP_003808570.1|598828_599080_+	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	53.4	1.6e-18
WP_010931494.1|599143_600277_+	benzoate/H(+) symporter BenE family transporter	NA	NA	NA	NA	NA
WP_003808567.1|600284_600671_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931493.1|600667_603187_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003808563.1|603615_603954_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003808562.1|603950_604457_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_010931492.1|604518_605319_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931491.1|605429_606371_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931490.1|606464_608000_-	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931489.1|609679_611530_-	dipeptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.2	1.6e-17
WP_003808549.1|611533_612367_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931488.1|612366_613308_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931487.1|613559_614531_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931486.1|614672_616961_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003808542.1|617267_618176_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010931485.1|618230_619196_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931484.1|619270_620932_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_010931483.1|621003_621714_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|621862_622813_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814152.1|623511_623895_+	membrane protein	NA	NA	NA	NA	NA
WP_010927005.1|623952_624555_+	DUF2946 family protein	NA	NA	NA	NA	NA
WP_003820995.1|624572_624974_-	DoxX family protein	NA	NA	NA	NA	NA
WP_010931482.1|625089_626001_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931481.1|625997_626579_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_003814165.1|627373_628108_+	arginyltransferase	NA	NA	NA	NA	NA
WP_010931480.1|628148_629198_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_003814172.1|629345_629924_-	TIGR01841 family phasin	NA	NA	NA	NA	NA
WP_010931479.1|630310_631288_+	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA	NA
WP_010931478.1|631381_635776_-	dermonecrotic toxin	NA	NA	NA	NA	NA
WP_003814178.1|635976_636825_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931477.1|636983_637796_-	competence/damage-inducible protein A	NA	NA	NA	NA	NA
WP_005015810.1|637851_638802_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931453.1|638900_639701_-	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_003814185.1|639762_640146_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_033446148.1|640157_641510_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	2.1e-51
WP_003814188.1|641797_642127_-	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_010931455.1|642129_642879_-	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010931456.1|643061_643982_+	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_003814195.1|644028_644241_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931457.1|644263_644686_+	SnoaL-like domain-containing protein	NA	NA	NA	NA	NA
WP_010931458.1|644702_645803_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931459.1|645899_647417_-|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_003814203.1|647492_648332_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_033446149.1|648353_649226_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814206.1|649316_650411_-	porin	NA	NA	NA	NA	NA
WP_076879617.1|650704_651655_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166340.1|651729_652671_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
NZ_CP013081	Bordetella pertussis strain E602 chromosome, complete genome	4108490	657995	704186	4108490	transposase,tail,tRNA,terminase	uncultured_Caudovirales_phage(18.18%)	50	NA	NA
WP_023995141.1|657995_659021_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814221.1|659061_659301_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931464.1|659370_660960_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_010931465.1|660959_661508_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_003814226.1|661588_662161_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010927008.1|662179_663091_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814230.1|663164_664133_-	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010931466.1|664255_665329_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_010931467.1|665333_667154_-	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_010930800.1|667230_668181_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446132.1|668269_668605_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_003819076.1|668738_669389_+	carbonic anhydrase	NA	NA	NA	NA	NA
WP_010931468.1|669410_670829_-	amidase	NA	NA	NA	NA	NA
WP_019248554.1|670898_671654_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247734.1|671622_672381_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931471.1|672391_673273_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931472.1|673289_673997_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931473.1|673999_674758_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931474.1|674967_676710_+	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010925795.1|676702_677227_+	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931475.1|677266_678061_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248926.1|678228_679302_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|679400_680351_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247378.1|680602_680809_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931451.1|680880_681492_-	S24 family peptidase	NA	NA	NA	NA	NA
WP_023853179.1|682046_682298_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_161633094.1|682290_682980_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|683236_684187_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247942.1|684826_685312_+|transposase	transposase	transposase	C7U0W1	Enterobacteria_phage	61.5	7.3e-39
WP_010931447.1|685298_686576_+|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_010931446.1|686578_687997_+	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931445.1|688025_689081_+	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931444.1|689086_689329_+	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931443.1|689451_690054_+	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_005012808.1|690482_691433_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931442.1|692107_692359_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|692421_692904_+	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_162096760.1|692917_693106_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931439.1|693105_693501_+	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_010931438.1|693497_693896_+	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931437.1|693892_694315_+	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_010931436.1|694322_694823_+	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931435.1|695077_695596_+	hypothetical protein	NA	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_003813412.1|695605_695935_+	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931434.1|695952_696243_+	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_010931433.1|696268_698881_+|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931432.1|698890_699250_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931431.1|699317_699851_+	DUF1833 family protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931430.1|699847_700237_+	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931429.1|700229_704186_+	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
>prophage 8
NZ_CP013081	Bordetella pertussis strain E602 chromosome, complete genome	4108490	710352	764282	4108490	transposase,tRNA	Planktothrix_phage(50.0%)	46	NA	NA
WP_003814636.1|710352_712083_+|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
WP_010931419.1|712135_712564_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814641.1|712566_713247_+	protein TolQ	NA	NA	NA	NA	NA
WP_003814643.1|713246_713705_+	protein TolR	NA	NA	NA	NA	NA
WP_010931418.1|713741_714716_+	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_010931417.1|714732_716049_+	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_003814650.1|716080_716578_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_003814652.1|716664_717354_+	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_010931416.1|717353_718403_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003814657.1|718399_719194_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
WP_019247923.1|719362_719713_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247922.1|719688_720246_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929584.1|721375_722326_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929184.1|724463_725693_+	spore maturation protein	NA	NA	NA	NA	NA
WP_003814419.1|725695_727138_-	pyruvate kinase	NA	NA	NA	NA	NA
WP_010931414.1|727242_728388_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_010931413.1|728419_729217_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931412.1|729241_730801_-	chaperone SurA	NA	NA	NA	NA	NA
WP_010931411.1|730797_733170_-	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931410.1|733279_734383_+	phosphotransferase	NA	NA	NA	NA	NA
WP_010931409.1|734382_735075_+	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_003814436.1|735218_735920_+	membrane protein	NA	NA	NA	NA	NA
WP_003814437.1|735904_736282_-	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_005012067.1|737013_737964_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814441.1|738123_738996_-	oxaloacetate decarboxylase	NA	NA	NA	NA	NA
WP_003814443.1|739336_739555_+	DUF1059 domain-containing protein	NA	NA	NA	NA	NA
WP_019247242.1|739594_740974_-	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_010929976.1|741015_742413_-	amidase family protein	NA	NA	NA	NA	NA
WP_010927038.1|742452_744105_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.8	6.0e-16
WP_010929977.1|744108_744993_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929978.1|744992_745934_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929979.1|746012_747632_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929980.1|747798_748614_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814459.1|748681_749251_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|749251_750202_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814461.1|750856_751954_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_003814462.1|751987_753253_+	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929591.1|753410_754361_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929982.1|754604_755195_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_010929983.1|755210_757655_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_003814467.1|757774_758746_-	FecR family protein	NA	NA	NA	NA	NA
WP_023852739.1|758877_759402_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_005012067.1|759361_760312_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929984.1|760533_762729_-	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_020699729.1|762801_763209_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|763331_764282_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP013081	Bordetella pertussis strain E602 chromosome, complete genome	4108490	886871	941438	4108490	transposase	Acidithiobacillus_phage(33.33%)	45	NA	NA
WP_023994644.1|886871_887888_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003813988.1|888084_889068_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930019.1|890666_892055_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003813991.1|892085_893075_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813992.1|893185_894418_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003813993.1|894699_895500_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930018.1|895522_897754_-	BCCT family transporter	NA	NA	NA	NA	NA
WP_010930017.1|898541_898988_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_003813996.1|899009_899756_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_003813997.1|899899_900877_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
WP_010930016.1|901510_902122_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
WP_003813999.1|902115_903333_-	threonine ammonia-lyase	NA	NA	NA	NA	NA
WP_005013747.1|903473_904424_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814000.1|904420_905140_-	lipoprotein	NA	NA	NA	NA	NA
WP_003821234.1|905260_907420_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_003814002.1|907510_907780_-	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_005019401.1|907868_908075_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814003.1|908073_908601_+	lipoprotein	NA	NA	NA	NA	NA
WP_003814004.1|908619_909399_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930015.1|909566_910583_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_003814006.1|910655_911147_-	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_003814007.1|911157_912873_-	acetolactate synthase 3 catalytic subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.3	3.1e-60
WP_005012067.1|914036_914987_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930051.1|914983_916816_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
WP_010930052.1|917214_917874_+	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
WP_010930054.1|918401_919082_-	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_010930055.1|919363_920080_+	flagellar brake protein	NA	NA	NA	NA	NA
WP_010930056.1|920094_921396_-	phospholipase	NA	NA	NA	NA	NA
WP_029444137.1|923540_926429_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010930057.1|926652_928005_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_004568140.1|928033_928555_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_003819989.1|928551_930006_+	carboxylase	NA	NA	NA	NA	NA
WP_023852826.1|930040_930289_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247557.1|930394_931270_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010930060.1|931295_932351_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930061.1|932363_933155_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930062.1|933187_934558_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_010929591.1|935734_936685_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930064.1|936737_936959_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810832.1|937118_937331_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|937450_938569_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810837.1|938665_938881_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810839.1|939074_939326_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930066.1|939438_940389_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|940487_941438_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP013081	Bordetella pertussis strain E602 chromosome, complete genome	4108490	954945	1027439	4108490	transposase	Bacillus_virus(16.67%)	58	NA	NA
WP_005012067.1|954945_955896_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930088.1|955892_956867_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003821497.1|956991_957903_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
WP_004566317.1|958179_958572_-	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
WP_005012808.1|958701_959652_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930090.1|959681_959864_-	type II toxin-antitoxin system HicA family toxin	NA	A0A1L2JY37	Aeribacillus_phage	56.1	3.7e-12
WP_010930091.1|960636_961818_-	MFS transporter	NA	NA	NA	NA	NA
WP_010930092.1|962033_962711_-	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_010930093.1|962707_963433_-	bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase	NA	NA	NA	NA	NA
WP_010930094.1|963558_964140_-	OmpA family protein	NA	NA	NA	NA	NA
WP_010930095.1|964510_967192_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	3.2e-104
WP_023852687.1|967194_968325_+	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	44.0	4.9e-78
WP_010930097.1|968317_969403_+	prephenate dehydratase	NA	NA	NA	NA	NA
WP_010930098.1|969489_970389_+	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010930099.1|970385_971714_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_010930100.1|971728_972400_+	(d)CMP kinase	NA	NA	NA	NA	NA
WP_010930101.1|972587_974303_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_010930102.1|974304_974664_+	integration host factor subunit beta	NA	NA	NA	NA	NA
WP_010930103.1|974855_975170_+	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
WP_010930104.1|975212_976433_+	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
WP_010930105.1|976429_977371_+	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A2H4N7X4	Lake_Baikal_phage	28.1	1.5e-16
WP_003821513.1|977367_978357_+	ADP-glyceromanno-heptose 6-epimerase	NA	E3SJ87	Synechococcus_phage	34.4	2.2e-26
WP_033446303.1|978391_978976_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|979074_980025_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486062.1|980105_981017_+	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	38.8	8.0e-47
WP_010930108.1|981077_982223_-	lytic murein transglycosylase B	NA	NA	NA	NA	NA
WP_003821521.1|982242_983157_+	histone deacetylase family protein	NA	A0A2K9KZC4	Tupanvirus	34.7	9.8e-45
WP_010930110.1|983228_983978_+	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
WP_010930111.1|983977_984907_+	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA	NA
WP_003821527.1|985150_986977_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003813333.1|987059_987701_+	peroxiredoxin	NA	NA	NA	NA	NA
WP_003821528.1|987890_988925_+	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930112.1|990761_991826_+	sulfate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.3	3.8e-24
WP_010930113.1|992623_993532_+	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA	NA
WP_023852693.1|995019_996294_+	PA0069 family radical SAM protein	NA	NA	NA	NA	NA
WP_023852686.1|996447_996828_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014905652.1|996835_997708_-	EamA family transporter	NA	NA	NA	NA	NA
WP_003813315.1|998013_998394_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_003813314.1|998604_999330_+	CoA pyrophosphatase	NA	NA	NA	NA	NA
WP_005012067.1|999425_1000376_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930118.1|1000480_1001530_+	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
WP_010929632.1|1001667_1002684_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010926548.1|1004192_1004765_-	chorismate lyase	NA	NA	NA	NA	NA
WP_010930119.1|1004824_1005556_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_029443805.1|1005607_1006525_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930121.1|1007332_1010512_+	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_014486063.1|1010508_1011891_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010930123.1|1011960_1012212_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_010930124.1|1012357_1012972_-	SCO family protein	NA	NA	NA	NA	NA
WP_010930125.1|1013158_1015219_-	M3 family metallopeptidase	NA	NA	NA	NA	NA
WP_003811948.1|1015348_1016200_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
WP_010930126.1|1016196_1016823_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003817147.1|1016819_1018574_-	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_010930127.1|1018866_1021572_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_010930128.1|1021584_1023246_+	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
WP_010930129.1|1023258_1025049_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
WP_003817151.1|1025270_1026446_-	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_010929584.1|1026488_1027439_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_CP013081	Bordetella pertussis strain E602 chromosome, complete genome	4108490	1048390	1098003	4108490	transposase,tRNA,holin	uncultured_Mediterranean_phage(50.0%)	42	NA	NA
WP_010929591.1|1048390_1049341_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811933.1|1049639_1050377_-	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
WP_010930143.1|1050812_1051136_+	flagellar transcriptional regulator FlhD	NA	NA	NA	NA	NA
WP_003811929.1|1051170_1051731_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
WP_003811927.1|1051851_1052727_+	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
WP_003817154.1|1052739_1053687_+	flagellar motor protein MotB	NA	NA	NA	NA	NA
WP_019247393.1|1053788_1054082_+	response regulator	NA	NA	NA	NA	NA
WP_010930144.1|1054108_1056166_+	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_003811919.1|1056180_1056681_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_010930145.1|1056754_1058461_+	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
WP_010930146.1|1059324_1060377_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_003811911.1|1060429_1060819_+	chemotaxis protein CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
WP_003817162.1|1060827_1061460_+	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_010931363.1|1061559_1062576_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003819773.1|1063406_1064414_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_014486064.1|1064410_1066054_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_010930149.1|1066050_1066938_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003809396.1|1067078_1067552_-	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_010930151.1|1067541_1068564_-	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
WP_015041211.1|1068560_1069988_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010931363.1|1070925_1071942_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003809411.1|1072274_1073210_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.5	3.0e-41
WP_010930154.1|1073259_1075140_-	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_003809416.1|1075206_1075551_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.4	1.0e-10
WP_010930155.1|1075695_1076832_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
WP_023853534.1|1076828_1077902_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_003809423.1|1078059_1079496_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_010930157.1|1079586_1080228_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_023853536.1|1080563_1081580_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_019248433.1|1081912_1084660_+	pertactin autotransporter	NA	NA	NA	NA	NA
WP_010930160.1|1084726_1086148_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_003809431.1|1086411_1087128_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003809432.1|1087212_1087530_+	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003819794.1|1087570_1087984_+|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_010930161.1|1087985_1088345_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853525.1|1088387_1089932_-	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
WP_010930163.1|1090015_1090846_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_010930164.1|1090880_1092035_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_010930165.1|1092077_1092950_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486065.1|1093066_1095355_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003809441.1|1096561_1097026_+	barstar family protein	NA	NA	NA	NA	NA
WP_005013747.1|1097052_1098003_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_CP013081	Bordetella pertussis strain E602 chromosome, complete genome	4108490	1113257	1178330	4108490	transposase,tRNA	Catovirus(25.0%)	45	NA	NA
WP_005012067.1|1113257_1114208_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_161633091.1|1114788_1115496_+	DUF192 domain-containing protein	NA	NA	NA	NA	NA
WP_003812707.1|1115854_1116841_-	homoserine kinase	NA	NA	NA	NA	NA
WP_010930178.1|1116980_1117994_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_005012067.1|1117990_1118941_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812703.1|1119053_1119512_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003812701.1|1119548_1120862_-	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_010930180.1|1120879_1121251_+	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
WP_019248549.1|1121247_1122711_+	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
WP_010930182.1|1122851_1123580_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_010930183.1|1123561_1126411_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010929591.1|1126623_1127574_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930184.1|1127741_1128566_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
WP_010930185.1|1128565_1129444_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930186.1|1130348_1131464_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_020699602.1|1131492_1132287_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.3	1.2e-11
WP_010930188.1|1132283_1134149_+	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
WP_003812436.1|1134227_1134860_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930189.1|1134856_1135159_-	membrane protein	NA	NA	NA	NA	NA
WP_010930190.1|1135201_1136722_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
WP_010926447.1|1136728_1137484_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010926448.1|1137513_1138618_-	peptide chain release factor 2	NA	NA	NA	NA	NA
WP_010930191.1|1138720_1140421_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.3	1.3e-50
WP_010930192.1|1140402_1141380_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247537.1|1141389_1142670_+	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_003812422.1|1142662_1143358_+	lipoprotein-releasing ABC transporter ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	38.6	7.0e-35
WP_010928340.1|1143391_1144219_+	TatD family hydrolase	NA	NA	NA	NA	NA
WP_010930194.1|1144500_1147731_+	autotransporter SphB3	NA	NA	NA	NA	NA
WP_010930196.1|1148466_1152393_+	inverse autotransporter beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_023853221.1|1154292_1156089_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248398.1|1156088_1157057_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816844.1|1157126_1157972_+	PHP domain-containing protein	NA	NA	NA	NA	NA
WP_003812405.1|1158039_1158594_+	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_010930198.1|1158640_1159591_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930199.1|1159689_1160322_-	fimbrial protein	NA	NA	NA	NA	NA
WP_010930200.1|1160487_1162770_-	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_010930201.1|1162924_1165621_-	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA	NA
WP_010930202.1|1165746_1166235_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813631.1|1168645_1171516_+	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_010930204.1|1171561_1172776_+	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_003813626.1|1173005_1174433_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	2.1e-41
WP_023853245.1|1174530_1175622_+	cell division protein ZapE	NA	NA	NA	NA	NA
WP_010930206.1|1175634_1176393_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003813621.1|1176480_1177383_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|1177379_1178330_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP013081	Bordetella pertussis strain E602 chromosome, complete genome	4108490	1319013	1387500	4108490	transposase	Planktothrix_phage(33.33%)	58	NA	NA
WP_005012808.1|1319013_1319964_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930283.1|1320732_1321371_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_019247793.1|1322260_1322707_+	glutamate racemase	NA	NA	NA	NA	NA
WP_010930284.1|1322788_1323490_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.4	1.3e-17
WP_003811277.1|1323490_1324258_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.4	1.2e-14
WP_010930285.1|1324254_1325493_-	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA	NA
WP_003811272.1|1325492_1326419_-	high-affinity branched-chain amino acid ABC transporter permease LivH	NA	NA	NA	NA	NA
WP_010930286.1|1326521_1327637_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005015810.1|1327652_1328603_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930287.1|1328956_1329538_-	queuosine precursor transporter	NA	A0A2I7SAW6	Vibrio_phage	37.3	9.4e-17
WP_003811267.1|1329534_1330368_-	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
WP_010930288.1|1330578_1331892_+	sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA	NA	NA	NA	NA
WP_003811262.1|1332068_1332950_+	sn-glycerol-3-phosphate ABC transporter permease UgpA	NA	NA	NA	NA	NA
WP_003811259.1|1332969_1333821_+	sn-glycerol-3-phosphate ABC transporter permease UgpE	NA	NA	NA	NA	NA
WP_010930289.1|1333873_1334962_+	sn-glycerol-3-phosphate import ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	31.2	2.2e-19
WP_010930290.1|1335072_1336200_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003811244.1|1336434_1337046_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010929584.1|1337144_1338095_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811293.1|1338316_1338694_-	DUF423 domain-containing protein	NA	NA	NA	NA	NA
WP_003811295.1|1338841_1339339_+	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
WP_010930291.1|1339335_1339863_+	RES family NAD+ phosphorylase	NA	NA	NA	NA	NA
WP_003811298.1|1339996_1340812_+	exported protein	NA	NA	NA	NA	NA
WP_010930292.1|1340824_1342006_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_003811301.1|1342053_1342947_-	phosphatidylserine decarboxylase	NA	NA	NA	NA	NA
WP_010930293.1|1343073_1343544_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930294.1|1343669_1344497_-	DUF3298 domain-containing protein	NA	NA	NA	NA	NA
WP_003811306.1|1344525_1345302_-	lipoate--protein ligase family protein	NA	NA	NA	NA	NA
WP_023852802.1|1345298_1345574_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930295.1|1345588_1346053_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930296.1|1346064_1346766_-	thiol:disulfide oxidoreductase	NA	NA	NA	NA	NA
WP_003811310.1|1346875_1347376_-	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	38.4	4.7e-25
WP_010930297.1|1347458_1348637_-	DUF1501 domain-containing protein	NA	NA	NA	NA	NA
WP_003811313.1|1350264_1350600_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_010930298.1|1350787_1352236_+	CoA transferase	NA	NA	NA	NA	NA
WP_023852799.1|1352293_1352638_+	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	58.4	3.0e-31
WP_003811316.1|1352744_1353284_-	peroxiredoxin	NA	NA	NA	NA	NA
WP_005012067.1|1353376_1354327_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852768.1|1354425_1354833_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247530.1|1355065_1355497_-	BcpO-related WXXGXW repeat protein	NA	NA	NA	NA	NA
WP_010930300.1|1355678_1356083_-	DoxX family protein	NA	NA	NA	NA	NA
WP_010930301.1|1357319_1357643_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247533.1|1357645_1358533_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_003811322.1|1358565_1358991_-	universal stress protein	NA	NA	NA	NA	NA
WP_019247534.1|1359062_1359416_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811324.1|1359655_1360162_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930302.1|1360200_1361532_-	transcriptional regulator PtsJ	NA	NA	NA	NA	NA
WP_003811326.1|1361591_1362407_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_010930303.1|1362403_1363258_+	pyridoxine/pyridoxal/pyridoxamine kinase	NA	NA	NA	NA	NA
WP_010930304.1|1366320_1368864_-	malto-oligosyltrehalose synthase	NA	NA	NA	NA	NA
WP_010930305.1|1370230_1371985_-	malto-oligosyltrehalose trehalohydrolase	NA	NA	NA	NA	NA
WP_010930306.1|1371981_1374102_-	glycogen debranching protein GlgX	NA	NA	NA	NA	NA
WP_010930307.1|1374106_1376302_-	1,4-alpha-glucan branching protein GlgB	NA	NA	NA	NA	NA
WP_010930308.1|1376298_1379640_-	maltose alpha-D-glucosyltransferase	NA	NA	NA	NA	NA
WP_010930208.1|1382442_1383393_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811361.1|1383458_1383638_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247449.1|1383754_1384510_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010930310.1|1384496_1385642_-	DUF3182 family protein	NA	NA	NA	NA	NA
WP_010930208.1|1386549_1387500_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP013081	Bordetella pertussis strain E602 chromosome, complete genome	4108490	1447991	1503479	4108490	transposase,protease	Mollivirus(16.67%)	56	NA	NA
WP_005012067.1|1447991_1448942_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811846.1|1450143_1450590_-	flagellar export protein FliJ	NA	NA	NA	NA	NA
WP_019247562.1|1450582_1452058_-	flagellar protein export ATPase FliI	NA	NA	NA	NA	NA
WP_010930338.1|1452054_1452810_-	flagellar assembly protein FliH	NA	NA	NA	NA	NA
WP_003817203.1|1452802_1453813_-	flagellar motor switch protein FliG	NA	NA	NA	NA	NA
WP_010930339.1|1453802_1455479_-	flagellar basal body M-ring protein FliF	NA	NA	NA	NA	NA
WP_010930340.1|1455791_1456124_+	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA	NA
WP_010930341.1|1456137_1456533_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930342.1|1456542_1456869_-	flagellar biosynthesis protein FlhB	NA	NA	NA	NA	NA
WP_019247563.1|1456865_1457192_-	flagellar hook-length control protein FliK	NA	NA	NA	NA	NA
WP_023994685.1|1457118_1458141_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930343.1|1458137_1458488_-	flagellar protein FliT	NA	NA	NA	NA	NA
WP_010930344.1|1458535_1458964_-	flagellar export chaperone FliS	NA	NA	NA	NA	NA
WP_010930345.1|1458971_1460345_-	flagellar filament capping protein FliD	NA	NA	NA	NA	NA
WP_003817216.1|1460485_1460863_-	flagellar protein FlaG	NA	NA	NA	NA	NA
WP_010930346.1|1461125_1462433_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_023852965.1|1462493_1463324_+	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_003811815.1|1463320_1463809_+	CvpA family protein	NA	NA	NA	NA	NA
WP_003811814.1|1463850_1465371_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	43.7	4.8e-97
WP_003811812.1|1465414_1465891_-	disulfide bond formation protein B	NA	NA	NA	NA	NA
WP_010930348.1|1466694_1469292_-	[protein-PII] uridylyltransferase	NA	NA	NA	NA	NA
WP_003811806.1|1469321_1470143_-	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
WP_003811803.1|1470869_1471619_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
WP_010926570.1|1471802_1472681_+	elongation factor Ts	NA	NA	NA	NA	NA
WP_010930349.1|1472778_1473495_+	UMP kinase	NA	NA	NA	NA	NA
WP_003811796.1|1473509_1474070_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_010930350.1|1474236_1475001_+	di-trans,poly-cis-decaprenylcistransferase	NA	R9W0U9	Flavobacterium_phage	36.1	1.7e-18
WP_010930351.1|1475020_1475878_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003811788.1|1475874_1477074_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_010930352.1|1477113_1478448_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_010930353.1|1478500_1480837_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
WP_003811782.1|1480962_1481526_+	OmpH family outer membrane protein	NA	NA	NA	NA	NA
WP_010930354.1|1481534_1482626_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
WP_003811776.1|1482697_1483153_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA	NA
WP_010930355.1|1483153_1483948_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
WP_010930356.1|1483944_1485126_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
WP_003811770.1|1485112_1485718_+	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	40.2	8.8e-26
WP_003811768.1|1485714_1486488_+	RNA methyltransferase	NA	NA	NA	NA	NA
WP_010930357.1|1486499_1487327_-	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
WP_010930358.1|1487488_1489852_+	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	35.9	2.2e-165
WP_010930359.1|1489919_1490639_-	glutamine amidotransferase	NA	NA	NA	NA	NA
WP_003811761.1|1490762_1491188_+	membrane protein	NA	NA	NA	NA	NA
WP_005012067.1|1491222_1492173_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811759.1|1492290_1493217_+	paraslipin	NA	NA	NA	NA	NA
WP_010930360.1|1493282_1494440_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
WP_003811754.1|1494420_1494888_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
WP_010930800.1|1495035_1495986_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811752.1|1496002_1496437_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_003811750.1|1496426_1496777_+	RnfH family protein	NA	NA	NA	NA	NA
WP_003811748.1|1496973_1498128_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003811746.1|1498124_1499297_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003811743.1|1499344_1500238_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003811741.1|1500283_1500721_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_010930362.1|1500780_1501470_+	VIT family protein	NA	NA	NA	NA	NA
WP_010930363.1|1501479_1502430_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879624.1|1502528_1503479_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP013081	Bordetella pertussis strain E602 chromosome, complete genome	4108490	1695451	1759029	4108490	transposase,protease	Klebsiella_phage(11.11%)	48	NA	NA
WP_005012808.1|1695451_1696402_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930866.1|1702880_1705628_+	autotransporter Vag8	NA	NA	NA	NA	NA
WP_010930865.1|1705648_1706272_-	septum formation inhibitor Maf	NA	NA	NA	NA	NA
WP_003813199.1|1706283_1706754_-	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
WP_003813196.1|1706765_1707152_-	ribosome silencing factor	NA	NA	NA	NA	NA
WP_010930864.1|1707213_1707807_-	nicotinate (nicotinamide) nucleotide adenylyltransferase	NA	NA	NA	NA	NA
WP_010930863.1|1707797_1708709_-	oxygen-dependent coproporphyrinogen oxidase	NA	NA	NA	NA	NA
WP_023853662.1|1708724_1710035_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_010930861.1|1710132_1710864_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_023853666.1|1711018_1712539_+	DUF853 domain-containing protein	NA	A0A248XCZ8	Klebsiella_phage	44.9	1.7e-78
WP_010930859.1|1712599_1713955_+	sodium:alanine symporter family protein	NA	NA	NA	NA	NA
WP_076879554.1|1713989_1715315_-	aspartate aminotransferase family protein	NA	A0A1C9EHH3	Mycobacterium_phage	22.5	1.8e-07
WP_010930857.1|1715496_1716429_+	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA	NA
WP_010930856.1|1716439_1717933_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930855.1|1717929_1718853_-	DMT family transporter	NA	NA	NA	NA	NA
WP_010930854.1|1718855_1720118_-	Zn-dependent hydrolase	NA	NA	NA	NA	NA
WP_047122810.1|1720137_1721151_-	histone deacetylase family protein	NA	A0A2K9L4C2	Tupanvirus	35.2	1.7e-42
WP_010930852.1|1721223_1721514_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010930851.1|1721543_1722818_-	4-aminobutyrate--2-oxoglutarate transaminase	NA	A0A1V0SKB7	Klosneuvirus	27.9	1.6e-24
WP_005013747.1|1722960_1723911_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930850.1|1723907_1725545_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	3.6e-21
WP_003813165.1|1725549_1726389_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_023997180.1|1726385_1727393_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930848.1|1727509_1729084_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930847.1|1729503_1731048_+	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	25.4	3.1e-14
WP_010930846.1|1731152_1732220_+	tartrate dehydrogenase	NA	NA	NA	NA	NA
WP_010930845.1|1732238_1733825_-	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_010930844.1|1733821_1735012_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_003813149.1|1736584_1737073_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813147.1|1737132_1737990_-	DMT family transporter	NA	NA	NA	NA	NA
WP_010930843.1|1738052_1739003_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010930842.1|1739065_1740055_+	quinone oxidoreductase	NA	NA	NA	NA	NA
WP_003813142.1|1740129_1741011_-|protease	protease HtpX	protease	NA	NA	NA	NA
WP_010930841.1|1742068_1742920_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_010930840.1|1742936_1743506_-	phosphohydrolase	NA	NA	NA	NA	NA
WP_010930839.1|1743536_1744400_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930838.1|1744559_1745636_+	putative 2-aminoethylphosphonate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.8	1.2e-28
WP_029443740.1|1745700_1747398_+	putative 2-aminoethylphosphonate ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_003820286.1|1747414_1748245_+	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA	NA
WP_010930836.1|1748273_1749296_+	putative 2-aminoethylphosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|1749825_1750776_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852827.1|1750772_1752095_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_004568205.1|1752195_1752513_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003809610.1|1752646_1753960_+	pyrimidine permease	NA	Q9KX94	Enterobacteria_phage	67.1	2.1e-149
WP_019247142.1|1753990_1755628_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	30.2	8.8e-12
WP_003809615.1|1756251_1756728_+	transcription elongation factor GreA	NA	NA	NA	NA	NA
WP_005013747.1|1757029_1757980_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931070.1|1758078_1759029_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
NZ_CP013081	Bordetella pertussis strain E602 chromosome, complete genome	4108490	1798142	1846157	4108490	transposase,tRNA	Moraxella_phage(18.18%)	42	NA	NA
WP_010930522.1|1798142_1799093_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930804.1|1799191_1801792_-	TRAP transporter fused permease subunit	NA	NA	NA	NA	NA
WP_003818658.1|1801898_1802903_-	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010930803.1|1803011_1804352_-	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	22.8	8.8e-18
WP_003818661.1|1804392_1805421_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930802.1|1805616_1806162_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930801.1|1806158_1806719_+	diaminobutyrate acetyltransferase	NA	NA	NA	NA	NA
WP_010930048.1|1806817_1807768_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930523.1|1807805_1808393_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	35.8	4.7e-16
WP_003811007.1|1808410_1808794_-	thioredoxin family protein	NA	V9SJ74	Achromobacter_phage	25.8	8.1e-09
WP_003811011.1|1810153_1811446_-	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	36.0	1.7e-66
WP_010930524.1|1811580_1812621_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	51.3	6.1e-91
WP_010929632.1|1812718_1813735_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_023852762.1|1814002_1814638_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_010930526.1|1814775_1815534_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.2	1.4e-68
WP_019247478.1|1815518_1816298_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.9	4.8e-32
WP_003811022.1|1816315_1817200_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A292GJG6	Xanthomonas_phage	49.5	4.6e-15
WP_019248494.1|1817196_1817976_+	3'-5' exonuclease	NA	NA	NA	NA	NA
WP_003816527.1|1818002_1818680_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930529.1|1818968_1819721_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003816525.1|1819839_1821240_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	26.5	7.3e-31
WP_003816523.1|1821263_1821662_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003811035.1|1821837_1822038_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_010930530.1|1822176_1822905_+	redoxin family protein	NA	A0A1D8KSL1	Synechococcus_phage	56.8	9.6e-43
WP_003816520.1|1823038_1824454_+	dihydrolipoyl dehydrogenase	NA	NA	NA	NA	NA
WP_003816518.1|1824457_1825321_-	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
WP_004568486.1|1825333_1826083_-	glycerophosphodiester phosphodiesterase	NA	A0A2H4PGQ5	Escherichia_phage	27.8	1.5e-14
WP_010930531.1|1826325_1828281_+	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_019247882.1|1828262_1828931_-	arylesterase	NA	NA	NA	NA	NA
WP_005012067.1|1829705_1830656_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|1830754_1831705_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813572.1|1831853_1832192_-	BON domain-containing protein	NA	NA	NA	NA	NA
WP_003813570.1|1832249_1832411_-	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
WP_003813568.1|1832442_1832643_-	CsbD family protein	NA	NA	NA	NA	NA
WP_010930533.1|1832908_1835482_-	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_019247811.1|1835552_1838102_-	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_010930535.1|1840652_1841141_+	DUF1854 domain-containing protein	NA	NA	NA	NA	NA
WP_029443743.1|1841232_1842384_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_004566336.1|1842437_1843259_+	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_010930537.1|1843297_1844527_+	lytic murein transglycosylase	NA	NA	NA	NA	NA
WP_004566334.1|1844655_1845096_+	DUF937 domain-containing protein	NA	NA	NA	NA	NA
WP_005012808.1|1845206_1846157_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
NZ_CP013081	Bordetella pertussis strain E602 chromosome, complete genome	4108490	1907719	1966989	4108490	transposase,protease,tRNA	Klosneuvirus(40.0%)	51	NA	NA
WP_005013747.1|1907719_1908670_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930573.1|1908794_1909604_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010929577.1|1909804_1910755_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930574.1|1912028_1913246_+	four-carbon acid sugar kinase family protein	NA	NA	NA	NA	NA
WP_003818670.1|1914302_1915205_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930576.1|1915281_1916154_+	MOSC domain-containing protein	NA	NA	NA	NA	NA
WP_003818672.1|1916284_1916653_+	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
WP_010930577.1|1916710_1917757_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
WP_010930578.1|1917952_1919209_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_003810623.1|1919213_1920551_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_003818676.1|1920700_1921657_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247555.1|1921759_1922692_-	acyclic terpene utilization AtuA family protein	NA	NA	NA	NA	NA
WP_019247554.1|1922807_1923128_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247553.1|1923120_1923480_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930581.1|1923527_1925102_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810637.1|1925154_1926099_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930582.1|1926116_1926947_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930583.1|1926939_1928574_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	8.2e-18
WP_010930584.1|1928570_1929926_+	amidase	NA	NA	NA	NA	NA
WP_010930585.1|1930832_1932410_+	lipoprotein	NA	NA	NA	NA	NA
WP_010930586.1|1932413_1933688_+	type 4b pilus protein PilO2	NA	NA	NA	NA	NA
WP_010930587.1|1933785_1934160_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930588.1|1935875_1937009_+	general secretion pathway protein	NA	NA	NA	NA	NA
WP_003810661.1|1937046_1937652_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_010930589.1|1937648_1938467_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930590.1|1938538_1941163_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
WP_004568544.1|1941149_1941404_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_010930591.1|1941470_1942052_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926757.1|1942355_1942616_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_014905757.1|1942781_1943405_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_003816734.1|1943404_1944178_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_010930593.1|1944174_1945383_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_010930594.1|1945408_1945882_-	RidA family protein	NA	NA	NA	NA	NA
WP_010930048.1|1945955_1946906_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879566.1|1947004_1947955_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930796.1|1948053_1949403_-	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_023852900.1|1950168_1950924_+	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_010930794.1|1951016_1953899_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
WP_003810689.1|1954221_1954647_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
WP_004568542.1|1954674_1955823_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_003810693.1|1955819_1956326_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_033446257.1|1956341_1957628_+	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_033446258.1|1957677_1958973_+|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930791.1|1958974_1959613_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_023852925.1|1959618_1960776_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_003810703.1|1960802_1962158_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_010930790.1|1962161_1963232_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810707.1|1963370_1963607_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930789.1|1963694_1964801_+	GTPase HflX	NA	NA	NA	NA	NA
WP_010930788.1|1964766_1966071_+|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930787.1|1966089_1966989_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
>prophage 18
NZ_CP013081	Bordetella pertussis strain E602 chromosome, complete genome	4108490	1977229	2021552	4108490	transposase	Staphylococcus_phage(25.0%)	44	NA	NA
WP_005013747.1|1977229_1978180_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|1978278_1979229_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930782.1|1979428_1980514_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_003810400.1|1980529_1981291_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930781.1|1981287_1982211_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.6	1.6e-23
WP_019248115.1|1982309_1982834_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930779.1|1982842_1983586_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_010930778.1|1983681_1983921_-	membrane protein	NA	NA	NA	NA	NA
WP_010930777.1|1983934_1984087_-	lipoprotein	NA	NA	NA	NA	NA
WP_010930776.1|1984172_1985663_-	cytochrome c oxidase accessory protein CcoG	NA	NA	NA	NA	NA
WP_010930775.1|1985754_1986693_-	cytochrome-c oxidase, cbb3-type subunit III	NA	NA	NA	NA	NA
WP_003818560.1|1986689_1986866_-	cytochrome oxidase	NA	NA	NA	NA	NA
WP_003810383.1|1986868_1987531_-	cytochrome-c oxidase, cbb3-type subunit II	NA	NA	NA	NA	NA
WP_003810379.1|1989152_1989296_-	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA	NA
WP_010930774.1|1989292_1990267_-	membrane protein	NA	NA	NA	NA	NA
WP_005012067.1|1990433_1991384_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930773.1|1991380_1992655_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_010930772.1|1992758_1993952_+	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930771.1|1993948_1994602_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930770.1|1994598_1996035_+	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930769.1|1996022_1996382_+	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_162268681.1|1997196_1997337_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1997354_1998305_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930768.1|1999350_2001216_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930767.1|2001473_2002994_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_003816959.1|2003081_2003732_-	flavodoxin family protein	NA	NA	NA	NA	NA
WP_010930766.1|2004680_2005976_+	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_010930765.1|2005997_2006882_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930764.1|2006980_2007856_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_003816964.1|2007845_2008202_-	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
WP_010930763.1|2008332_2009307_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003812228.1|2009436_2009616_-	DUF3008 family protein	NA	NA	NA	NA	NA
WP_029443822.1|2009713_2010238_+	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_010930761.1|2010248_2011085_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816971.1|2011197_2011569_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930760.1|2011565_2012117_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_003816975.1|2012132_2013824_-	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
WP_003816977.1|2013872_2014553_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014905663.1|2014800_2015265_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930758.1|2015434_2016364_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_019247659.1|2016376_2017024_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023997035.1|2017097_2018915_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
WP_005012067.1|2018998_2019949_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|2020601_2021552_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
NZ_CP013081	Bordetella pertussis strain E602 chromosome, complete genome	4108490	2301095	2362458	4108490	transposase,tRNA	Yellowstone_lake_phycodnavirus(12.5%)	52	NA	NA
WP_005013747.1|2301095_2302046_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811701.1|2302162_2302882_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930605.1|2303054_2304041_+	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010930604.1|2304041_2304524_+	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_003811706.1|2304527_2305811_+	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_003811709.1|2305807_2306746_+	citrate lyase subunit beta	NA	NA	NA	NA	NA
WP_010930603.1|2306742_2308452_+	thiamine pyrophosphate-binding protein	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	27.3	5.9e-35
WP_010930602.1|2308461_2309709_+	Zn-dependent hydrolase	NA	NA	NA	NA	NA
WP_003811716.1|2311319_2312609_-	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA	NA
WP_003811719.1|2313746_2314520_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	3.1e-31
WP_010930601.1|2315181_2315925_-	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930600.1|2315999_2316740_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930599.1|2316935_2317772_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_010930598.1|2317822_2318593_-	TatD family hydrolase	NA	NA	NA	NA	NA
WP_010930597.1|2318642_2319695_-	DNA polymerase III subunit delta'	NA	NA	NA	NA	NA
WP_003811733.1|2319691_2320318_-	dTMP kinase	NA	A0A1L2BX49	Bacteriophage	35.1	1.6e-22
WP_010930596.1|2320314_2321349_-	endolytic transglycosylase MltG	NA	NA	NA	NA	NA
WP_010930595.1|2321527_2322544_+	folate-binding protein YgfZ	NA	NA	NA	NA	NA
WP_005012067.1|2322642_2323593_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930797.1|2326333_2327623_-	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_010930798.1|2327741_2328179_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930799.1|2328222_2329431_-	NO-inducible flavohemoprotein	NA	NA	NA	NA	NA
WP_003810867.1|2329577_2330042_+	GatB/YqeY domain-containing protein	NA	A0A0K2FLI9	Brevibacillus_phage	32.4	3.9e-05
WP_014905945.1|2330065_2331016_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930521.1|2332000_2332774_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930520.1|2332770_2333769_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930519.1|2333853_2334630_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.2	1.2e-30
WP_010930518.1|2334785_2336390_-	ABC-F family ATPase	NA	A0A1V0SKJ1	Klosneuvirus	28.9	1.2e-53
WP_003816541.1|2336770_2337895_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810992.1|2338021_2338645_+	TRAP transporter small permease subunit	NA	NA	NA	NA	NA
WP_010930517.1|2338641_2340543_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_010930516.1|2340591_2341386_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010930515.1|2341398_2342400_-	muramoyltetrapeptide carboxypeptidase	NA	NA	NA	NA	NA
WP_010930514.1|2342396_2342846_-|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	S4VYT2	Pandoravirus	38.2	2.0e-06
WP_010930513.1|2342895_2343744_-	hydrolase	NA	NA	NA	NA	NA
WP_077123453.1|2343841_2344399_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931070.1|2344442_2345393_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930511.1|2345548_2345875_-	cation:proton antiporter	NA	NA	NA	NA	NA
WP_033446177.1|2345871_2346153_-	K+/H+ antiporter subunit F	NA	NA	NA	NA	NA
WP_010930510.1|2346152_2346632_-	Na+/H+ antiporter subunit E	NA	NA	NA	NA	NA
WP_004568496.1|2346628_2348257_-	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA	NA
WP_003810969.1|2348253_2348598_-	Na+/H+ antiporter subunit C	NA	NA	NA	NA	NA
WP_010930509.1|2348597_2351531_-	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA	NA
WP_010929588.1|2352689_2353640_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811452.1|2353738_2354035_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930508.1|2354141_2355059_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930507.1|2355063_2355777_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930506.1|2355790_2356762_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930505.1|2358511_2358862_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930504.1|2358865_2360053_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930503.1|2360491_2361214_+	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_005013747.1|2361507_2362458_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NZ_CP013081	Bordetella pertussis strain E602 chromosome, complete genome	4108490	2384298	2455446	4108490	transposase	Tetraselmis_virus(10.0%)	54	NA	NA
WP_005012067.1|2384298_2385249_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852967.1|2385801_2387427_-	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_010930475.1|2387476_2388511_-	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_010930476.1|2388513_2389860_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930477.1|2389856_2391371_-	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_077085662.1|2391361_2392843_-	DUF4381 family protein	NA	NA	NA	NA	NA
WP_010930479.1|2392839_2393781_-	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930480.1|2393789_2394758_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930481.1|2396297_2397266_+	transporter	NA	NA	NA	NA	NA
WP_010930482.1|2397443_2398433_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010926609.1|2398479_2399238_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930483.1|2399427_2400165_+	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_005012808.1|2400263_2401214_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816696.1|2401398_2402181_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_003810743.1|2402174_2402876_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003810741.1|2403115_2403718_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|2405044_2405995_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486074.1|2405991_2407548_-	LTA synthase family protein	NA	NA	NA	NA	NA
WP_010930486.1|2407540_2408314_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_005013747.1|2408372_2409323_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852812.1|2409404_2410580_-	capsular biosynthesis protein	NA	NA	NA	NA	NA
WP_010930473.1|2410593_2412651_-	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_010930472.1|2412647_2413673_-	Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC	NA	A0A2K9L4U8	Tupanvirus	44.2	4.7e-72
WP_010930471.1|2413684_2414974_-	Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB	NA	NA	NA	NA	NA
WP_010930470.1|2414996_2416094_-	capsular polysaccharide export protein	NA	NA	NA	NA	NA
WP_003811224.1|2416090_2416981_-	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_010930469.1|2416977_2419062_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_010930468.1|2419093_2420263_-	capsule polysaccharide transporter	NA	NA	NA	NA	NA
WP_014486073.1|2420304_2421045_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_010930466.1|2421044_2421815_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930465.1|2422670_2423456_+	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	32.0	1.1e-12
WP_010930464.1|2423482_2425567_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247170.1|2425734_2427690_+	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_003811209.1|2428013_2428514_-	DNA starvation/stationary phase protection protein	NA	W5S6G8	Pithovirus	35.5	6.4e-14
WP_010930461.1|2428612_2430139_-	CoA-acylating methylmalonate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930460.1|2430276_2431164_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811203.1|2431178_2432132_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	26.5	7.2e-14
WP_033446218.1|2432183_2434274_-	ATP-dependent DNA helicase RecG	NA	NA	NA	NA	NA
WP_010930458.1|2434289_2434676_-	reactive intermediate/imine deaminase	NA	NA	NA	NA	NA
WP_010930457.1|2437369_2438173_-	2,5-didehydrogluconate reductase DkgB	NA	A0A2H4PQR8	Staphylococcus_phage	32.4	2.0e-33
WP_010930456.1|2439466_2440369_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811187.1|2440433_2441210_-	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
WP_010930455.1|2441531_2442581_+	Fe(3+) ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930454.1|2442704_2444375_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_019248220.1|2444379_2445174_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.4	8.3e-16
WP_005012067.1|2445272_2446223_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930453.1|2446242_2447148_-	pirin family protein	NA	NA	NA	NA	NA
WP_003811176.1|2447225_2447924_-	pirin family protein	NA	NA	NA	NA	NA
WP_010930452.1|2448083_2449028_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930451.1|2449037_2450525_-	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
WP_003811167.1|2450524_2451592_-	PAS domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
WP_003811164.1|2451655_2453068_-	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_010930450.1|2453253_2454474_-	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
WP_005012808.1|2454495_2455446_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
NZ_CP013081	Bordetella pertussis strain E602 chromosome, complete genome	4108490	2539645	2590817	4108490	transposase,tRNA	Salmonella_phage(20.0%)	47	NA	NA
WP_005012067.1|2539645_2540596_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812577.1|2540694_2541465_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.5	8.3e-29
WP_010930397.1|2541461_2542133_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuD	NA	NA	NA	NA	NA
WP_003812581.1|2542129_2542771_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuC	NA	NA	NA	NA	NA
WP_010930396.1|2542783_2543704_-	ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB	NA	NA	NA	NA	NA
WP_010930395.1|2543864_2545025_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930394.1|2545066_2546017_-	ornithine cyclodeaminase family protein	NA	NA	NA	NA	NA
WP_010930393.1|2546615_2546840_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930392.1|2547004_2548699_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA	NA
WP_003812598.1|2548820_2549090_-	HPr family phosphocarrier protein	NA	NA	NA	NA	NA
WP_003812601.1|2549205_2549604_-	PTS mannose transporter subunit IIA	NA	NA	NA	NA	NA
WP_010930391.1|2549614_2550571_-	glutathione synthase	NA	NA	NA	NA	NA
WP_033446215.1|2550707_2551253_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	29.9	9.1e-14
WP_003812608.1|2551273_2553223_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.0	4.1e-125
WP_019248759.1|2553610_2554387_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003812612.1|2554392_2554785_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2555206_2556157_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930389.1|2556153_2557251_-	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	37.3	3.5e-20
WP_076879548.1|2557282_2558233_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814009.1|2560014_2561256_-	MFS transporter	NA	NA	NA	NA	NA
WP_003814010.1|2561267_2562041_-	peroxide stress protein YaaA	NA	NA	NA	NA	NA
WP_005012067.1|2562067_2563018_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814011.1|2563116_2563899_-	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003814012.1|2563987_2565214_-	transporter	NA	NA	NA	NA	NA
WP_003814013.1|2565939_2567325_+	alcaligin siderophore biosynthesis protein AlcA	NA	NA	NA	NA	NA
WP_003814014.1|2567343_2567949_+	alcaligin siderophore biosynthesis protein AlcB	NA	NA	NA	NA	NA
WP_010930939.1|2567945_2569802_+	alcaligin siderophore biosynthesis protein AlcC	NA	NA	NA	NA	NA
WP_003814016.1|2569798_2570599_+	alcaligin siderophore biosynthesis protein AlcD	NA	NA	NA	NA	NA
WP_005013753.1|2570613_2571807_+	alcaligin siderophore biosynthesis protein AlcE	NA	NA	NA	NA	NA
WP_003814017.1|2571874_2572849_+	alcaligin siderophore biosynthesis transcriptional regulator AlcR	NA	NA	NA	NA	NA
WP_010930940.1|2572971_2574195_+	alcaligin siderophore export MFS transporter Bcr	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
WP_010930941.1|2574305_2576510_+	TonB-dependent alcaligin siderophore receptor FauA	NA	NA	NA	NA	NA
WP_003814020.1|2576804_2577464_+	NAAT family transporter	NA	NA	NA	NA	NA
WP_019247690.1|2577471_2577678_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814021.1|2578016_2578772_+	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_003814023.1|2579042_2579558_+	hypothetical protein	NA	T1SAR8	Salmonella_phage	44.6	5.1e-06
WP_003814024.1|2579830_2580148_+	virulence factor	NA	NA	NA	NA	NA
WP_005014990.1|2580335_2580572_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930944.1|2580862_2582218_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
WP_010930945.1|2582264_2583605_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
WP_010930946.1|2583706_2584339_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_010930947.1|2584338_2586708_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
WP_010930948.1|2586740_2587700_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
WP_010929073.1|2587686_2588373_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005015014.1|2588369_2588702_+	multidrug transporter	NA	NA	NA	NA	NA
WP_005012067.1|2588817_2589768_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|2589866_2590817_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
NZ_CP013081	Bordetella pertussis strain E602 chromosome, complete genome	4108490	2693641	2734842	4108490	transposase,tRNA	Salmonella_phage(40.0%)	39	NA	NA
WP_010931007.1|2693641_2696059_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_010926359.1|2696071_2697094_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	38.6	1.0e-26
WP_003812832.1|2697168_2697528_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_003812834.1|2697543_2697741_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_010929584.1|2698076_2699027_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816756.1|2699221_2699671_+	dUTP diphosphatase	NA	S4TNT3	Salmonella_phage	67.2	3.7e-45
WP_005012808.1|2699667_2700618_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931008.1|2700728_2702177_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_023853496.1|2702291_2702537_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2702676_2703627_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820420.1|2703871_2704585_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_019247724.1|2704707_2704935_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003816758.1|2705229_2705868_-	DedA family protein	NA	NA	NA	NA	NA
WP_010931011.1|2705976_2707011_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_010929591.1|2707007_2707958_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931012.1|2708373_2708898_-	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
WP_004567322.1|2708901_2709171_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931013.1|2709369_2710431_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931014.1|2710514_2712149_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
WP_010931015.1|2712150_2712954_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931016.1|2712982_2713942_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931017.1|2713945_2715460_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248147.1|2715496_2716501_-	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931018.1|2716932_2717403_-	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
WP_010931019.1|2717438_2718050_-	LysE family translocator	NA	NA	NA	NA	NA
WP_010931020.1|2718080_2718704_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_010931021.1|2718784_2720317_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_023853282.1|2720351_2721569_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931023.1|2721636_2722668_-	alcohol dehydrogenase catalytic domain-containing protein	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
WP_010931024.1|2722664_2723834_-	NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_010931025.1|2723827_2724508_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931026.1|2724669_2725512_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931027.1|2725674_2726646_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931028.1|2726817_2727696_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931029.1|2727718_2728789_-	FUSC family protein	NA	NA	NA	NA	NA
WP_005013747.1|2728829_2729780_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931030.1|2730072_2731431_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931031.1|2731542_2733270_+	sulfate permease	NA	NA	NA	NA	NA
WP_005013747.1|2733891_2734842_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NZ_CP013081	Bordetella pertussis strain E602 chromosome, complete genome	4108490	2785245	2858115	4108490	transposase,tRNA	Moraxella_phage(16.67%)	58	NA	NA
WP_003810909.1|2785245_2785662_-|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931061.1|2785772_2786405_+	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA	NA
WP_010931062.1|2786433_2786877_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_003810897.1|2786898_2787990_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931063.1|2788044_2788845_-	aldolase	NA	NA	NA	NA	NA
WP_010931064.1|2788980_2789601_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931065.1|2789740_2790214_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|2791353_2792304_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931066.1|2792300_2799962_-	filamentous hemagglutinin N-terminal domain-containing protein	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
WP_010931067.1|2800202_2804249_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
WP_003816847.1|2804561_2805143_+	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010931068.1|2805139_2806438_+	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010931069.1|2806517_2807546_+	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010931070.1|2807806_2808757_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|2808753_2809704_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931071.1|2810020_2810626_+	fimbrial protein	NA	NA	NA	NA	NA
WP_010931072.1|2810679_2811993_-	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
WP_003813284.1|2812067_2812538_-	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA	NA
WP_010931073.1|2812537_2813326_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
WP_010931074.1|2813336_2814989_-	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA	NA
WP_005012067.1|2815076_2816027_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931075.1|2817188_2817695_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA	NA
WP_003813293.1|2817691_2818456_-	phenylacetate-CoA oxygenase subunit PaaC	NA	NA	NA	NA	NA
WP_010931076.1|2818471_2818756_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA	NA
WP_003813298.1|2818820_2819810_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
WP_010931077.1|2819981_2820911_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA	NA
WP_003813302.1|2820882_2821569_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
WP_003813303.1|2821602_2822148_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	37.7	2.1e-26
WP_003813306.1|2822192_2823458_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003813309.1|2823454_2824357_+	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA	NA
WP_019247679.1|2825538_2826483_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931079.1|2826577_2828095_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931080.1|2828136_2829765_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_003811986.1|2829872_2830754_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931081.1|2833866_2834241_+	endonuclease	NA	F4YXR7	Roseobacter_phage	54.4	2.1e-25
WP_003812004.1|2834265_2834604_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931082.1|2834647_2836282_-	NAD+ synthase	NA	A0A2L0UZF5	Agrobacterium_phage	36.6	8.3e-87
WP_010931083.1|2836320_2837667_-	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_003812010.1|2837774_2839196_+	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_010931084.1|2839265_2839850_-	nitroreductase	NA	NA	NA	NA	NA
WP_005012067.1|2839952_2840903_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931085.1|2841037_2842144_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010931086.1|2842154_2843252_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
WP_010931087.1|2843396_2844602_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_010931088.1|2844608_2845130_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA	NA
WP_023853551.1|2845126_2845609_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
WP_003819740.1|2845614_2845866_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
WP_003819741.1|2845846_2846332_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
WP_010931090.1|2846467_2849929_+	DUF748 domain-containing protein	NA	NA	NA	NA	NA
WP_010931091.1|2849946_2850831_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
WP_010931092.1|2850840_2851272_-	lipoprotein	NA	NA	NA	NA	NA
WP_003809348.1|2851518_2852022_+	peroxiredoxin	NA	M1I839	Pelagibacter_phage	44.1	1.8e-24
WP_010931094.1|2852099_2853500_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931095.1|2853574_2854450_-	membrane protein	NA	NA	NA	NA	NA
WP_023853546.1|2854446_2855454_-	biotin synthase BioB	NA	NA	NA	NA	NA
WP_010931097.1|2855921_2856227_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003819753.1|2856317_2856908_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930525.1|2857098_2858115_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 24
NZ_CP013081	Bordetella pertussis strain E602 chromosome, complete genome	4108490	2861258	2929117	4108490	transposase,protease	uncultured_Mediterranean_phage(28.57%)	50	NA	NA
WP_010930048.1|2861258_2862209_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995489.1|2862307_2863258_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2863356_2864307_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931099.1|2864303_2865098_-	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_010931100.1|2865129_2865834_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931101.1|2865908_2866709_-	SURF1 family protein	NA	NA	NA	NA	NA
WP_003809276.1|2866705_2867113_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_003819722.1|2867109_2867751_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_010931102.1|2867743_2869744_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_010931103.1|2871004_2872336_+	MFS transporter	NA	NA	NA	NA	NA
WP_005012067.1|2872332_2873283_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931105.1|2874989_2875256_-	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_003812839.1|2875963_2876302_+	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931107.1|2880854_2881457_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931108.1|2881553_2882843_+	MFS transporter	NA	NA	NA	NA	NA
WP_003812846.1|2882900_2883632_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931109.1|2883628_2884432_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812851.1|2884428_2885517_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|2885513_2886443_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812857.1|2886591_2887737_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_077123454.1|2887758_2888709_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931110.1|2889039_2892861_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010931111.1|2893017_2893686_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_014905522.1|2893690_2895364_-	MCE family protein	NA	NA	NA	NA	NA
WP_003820402.1|2895382_2896702_-	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_010931114.1|2896706_2899022_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.1e-164
WP_010931115.1|2899077_2901246_-	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_023853340.1|2901242_2906423_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_003820400.1|2906521_2906836_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_003812875.1|2907063_2907309_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820399.1|2907403_2907922_+	hypothetical protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_010931117.1|2908021_2909227_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_019247560.1|2909342_2910740_-	chloride channel protein	NA	NA	NA	NA	NA
WP_010931119.1|2910856_2911435_-	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_010931120.1|2911507_2912899_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_005012067.1|2913066_2914017_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812889.1|2914297_2914918_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_010931122.1|2914914_2915328_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_010931123.1|2915324_2916368_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_003812895.1|2916423_2916612_+	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931124.1|2916621_2917386_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_010931125.1|2917476_2918133_+	adenylate kinase	NA	NA	NA	NA	NA
WP_010931126.1|2918224_2918983_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931127.1|2919008_2920610_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931128.1|2920810_2921815_+	DUF4880 domain-containing protein	NA	NA	NA	NA	NA
WP_003812908.1|2921915_2922179_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931129.1|2922296_2923073_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_005012067.1|2923663_2924614_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931130.1|2926997_2928110_-	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_005012808.1|2928166_2929117_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 25
NZ_CP013081	Bordetella pertussis strain E602 chromosome, complete genome	4108490	2959503	3003194	4108490	transposase	Planktothrix_phage(33.33%)	39	NA	NA
WP_005012067.1|2959503_2960454_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852715.1|2960574_2961471_-	inositol monophosphatase	NA	NA	NA	NA	NA
WP_003814547.1|2963748_2965974_+	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_003814544.1|2966138_2967227_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_019247918.1|2967183_2967837_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931144.1|2967884_2968682_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930176.1|2969213_2970164_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994659.1|2970244_2971393_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|2971449_2972400_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814535.1|2972498_2972804_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_003820797.1|2972832_2973267_-	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_010931147.1|2973268_2974513_-	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003820799.1|2974509_2975220_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_033446288.1|2975234_2976146_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931149.1|2976508_2976913_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247890.1|2976909_2977368_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247891.1|2977374_2978283_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931150.1|2978279_2979146_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_003814524.1|2979132_2979960_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003820806.1|2979970_2981098_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_023852748.1|2982175_2983414_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931152.1|2983455_2984718_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010931153.1|2984724_2985477_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_019248355.1|2985528_2985714_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003820813.1|2985989_2986454_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_003820814.1|2986485_2987145_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_010931154.1|2987289_2989398_+	AsmA family protein	NA	NA	NA	NA	NA
WP_023852714.1|2989394_2990345_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931155.1|2990448_2991069_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003820818.1|2991172_2991913_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019248356.1|2993047_2994172_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247402.1|2994217_2994586_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2994827_2995778_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247492.1|2996813_2997356_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2997741_2998692_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931157.1|2998688_2999597_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815281.1|2999723_3000560_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
WP_010931158.1|3001072_3002182_+	porin	NA	NA	NA	NA	NA
WP_005012067.1|3002243_3003194_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 27
NZ_CP013081	Bordetella pertussis strain E602 chromosome, complete genome	4108490	3383140	3436881	4108490	transposase	Staphylococcus_phage(33.33%)	48	NA	NA
WP_023995489.1|3383140_3384091_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931336.1|3384495_3385140_-	urease accessory protein UreG	NA	NA	NA	NA	NA
WP_019247677.1|3385164_3385749_-	urease accessory protein UreF	NA	NA	NA	NA	NA
WP_014905506.1|3385849_3386467_-	urease accessory protein UreE	NA	NA	NA	NA	NA
WP_010931337.1|3386469_3388185_-	urease subunit alpha	NA	NA	NA	NA	NA
WP_010931338.1|3388181_3388490_-	urease subunit beta	NA	NA	NA	NA	NA
WP_003814828.1|3388506_3389124_-	HupE/UreJ family protein	NA	NA	NA	NA	NA
WP_010931340.1|3389168_3389471_-	urease subunit gamma	NA	NA	NA	NA	NA
WP_003814832.1|3389571_3390426_-	urease accessory protein UreD	NA	NA	NA	NA	NA
WP_124740609.1|3390613_3390838_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929281.1|3391007_3391280_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_010929282.1|3391697_3392105_-	GFA family protein	NA	NA	NA	NA	NA
WP_010931341.1|3392474_3393269_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010927102.1|3393369_3394605_+	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003814852.1|3394673_3395690_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931342.1|3395701_3397078_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003814856.1|3397074_3398271_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814858.1|3398267_3399806_-	SpoVR family protein	NA	NA	NA	NA	NA
WP_010931343.1|3399802_3401062_-	YeaH/YhbH family protein	NA	NA	NA	NA	NA
WP_005012067.1|3403002_3403953_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931344.1|3404719_3405814_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247312.1|3405806_3407141_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_003808193.1|3407094_3407778_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003808195.1|3407803_3408967_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_004566224.1|3408963_3409965_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931346.1|3409964_3410837_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931347.1|3410833_3411583_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931348.1|3411579_3412371_-	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931349.1|3412367_3413507_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_047122778.1|3413782_3414568_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486103.1|3414601_3415384_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_010931351.1|3415387_3415777_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931352.1|3416916_3417780_+	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931353.1|3417815_3418904_+	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_005013747.1|3418900_3419851_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247959.1|3420204_3423183_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003818344.1|3424109_3424988_+	fatty acid desaturase	NA	NA	NA	NA	NA
WP_005013747.1|3426936_3427887_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931354.1|3427883_3428351_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_010931355.1|3428393_3429164_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_010927090.1|3429184_3429985_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931356.1|3429995_3431405_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_003814739.1|3431499_3432285_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931561.1|3432524_3433541_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814742.1|3433648_3434041_-	OsmC family protein	NA	NA	NA	NA	NA
WP_010931357.1|3434178_3434859_+	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_023994844.1|3434863_3435835_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930179.1|3435930_3436881_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 28
NZ_CP013081	Bordetella pertussis strain E602 chromosome, complete genome	4108490	3443036	3502335	4108490	transposase,tRNA	Acinetobacter_phage(27.27%)	47	NA	NA
WP_003820957.1|3443036_3444800_+|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
WP_010931362.1|3444911_3445790_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003814250.1|3445902_3446718_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_003814252.1|3446721_3446973_+	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_010929632.1|3447057_3448074_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814254.1|3448404_3448626_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_019247693.1|3450986_3451904_-	DMT family transporter	NA	NA	NA	NA	NA
WP_019247692.1|3452401_3453610_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931365.1|3453689_3455261_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814275.1|3455378_3456314_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_003814277.1|3456502_3457447_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
WP_003814283.1|3458014_3463732_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
WP_010931367.1|3463737_3464865_+	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
WP_003814287.1|3464920_3465547_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|3465818_3466835_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010927020.1|3466930_3467641_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931368.1|3467637_3468627_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931369.1|3468722_3470354_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931370.1|3470356_3471094_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247745.1|3471249_3472122_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_023852703.1|3472471_3473611_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814300.1|3473607_3474267_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_003814302.1|3474338_3474971_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_010931372.1|3475000_3475519_+	flavin reductase family protein	NA	NA	NA	NA	NA
WP_010931373.1|3475529_3476639_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003814312.1|3476685_3477540_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931374.1|3477541_3478444_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3479666_3480617_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997720.1|3482372_3483362_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931375.1|3483537_3484326_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_003817833.1|3484322_3485354_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_003815390.1|3485372_3485936_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_010931376.1|3485991_3487512_-	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_010931377.1|3487775_3488480_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_023852620.1|3488487_3489216_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_003815381.1|3489330_3489705_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003815379.1|3489747_3491037_+	murein transglycosylase A	NA	NA	NA	NA	NA
WP_010931378.1|3491033_3492203_+	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_010931379.1|3492199_3493039_+	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931380.1|3493098_3494034_+	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_005012067.1|3494046_3494997_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931381.1|3495095_3496058_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_003817821.1|3496089_3496449_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931382.1|3496573_3497476_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_010931383.1|3497477_3499250_-	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_003815367.1|3499284_3500061_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_023852617.1|3501384_3502335_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 29
NZ_CP013081	Bordetella pertussis strain E602 chromosome, complete genome	4108490	3517273	3576395	4108490	transposase,tRNA	Planktothrix_phage(12.5%)	48	NA	NA
WP_005012808.1|3517273_3518224_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931392.1|3518352_3519486_-	M20 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931393.1|3519529_3520435_-	hydrolase	NA	NA	NA	NA	NA
WP_023852622.1|3520437_3522138_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	1.0e-15
WP_010931394.1|3522134_3523055_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003817805.1|3523062_3524040_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931395.1|3524098_3525133_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003815317.1|3527107_3527344_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931396.1|3527470_3528334_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_003815315.1|3528422_3529244_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003815313.1|3529323_3530061_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931397.1|3530057_3531050_-	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_010931398.1|3531202_3531826_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931399.1|3531870_3533019_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931400.1|3535342_3536293_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486105.1|3536633_3537584_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|3537682_3538633_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443756.1|3538929_3539427_+	cupredoxin family protein	NA	NA	NA	NA	NA
WP_010931403.1|3539469_3541245_+	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
WP_010931404.1|3541252_3542119_+	copper resistance protein B	NA	NA	NA	NA	NA
WP_019249391.1|3542125_3542860_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931406.1|3544029_3544824_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815296.1|3545113_3545704_+	cysteine dioxygenase	NA	NA	NA	NA	NA
WP_010931407.1|3545737_3547066_-	amidase	NA	NA	NA	NA	NA
WP_010931408.1|3547140_3548286_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014905478.1|3548397_3549396_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446233.1|3549358_3549793_+	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
WP_010929974.1|3551309_3552194_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929973.1|3552190_3553396_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010929972.1|3553392_3554253_-	endonuclease	NA	NA	NA	NA	NA
WP_003807038.1|3554365_3556156_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
WP_033446243.1|3556196_3556841_-	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	8.5e-11
WP_010929971.1|3556862_3557171_-	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929970.1|3557336_3558623_-	membrane protein	NA	NA	NA	NA	NA
WP_005012067.1|3560056_3561007_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929969.1|3561105_3562056_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929968.1|3564007_3565222_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_003815171.1|3565327_3566317_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
WP_003815172.1|3566313_3566922_+	HAD-IIIA family hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
WP_010929967.1|3566934_3567564_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_003815175.1|3567560_3568181_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_003815177.1|3568212_3569004_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
WP_010929966.1|3569855_3570311_+	PTS transporter subunit EIIA	NA	NA	NA	NA	NA
WP_010929965.1|3570329_3571256_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_010929964.1|3571309_3572596_-	cytochrome c	NA	NA	NA	NA	NA
WP_003815183.1|3573526_3574399_+	RNase adapter RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
WP_010929963.1|3574395_3575346_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
WP_005012067.1|3575444_3576395_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 30
NZ_CP013081	Bordetella pertussis strain E602 chromosome, complete genome	4108490	3708519	3841445	4108490	transposase,tRNA,integrase	uncultured_Mediterranean_phage(10.34%)	114	3753162:3753179	3797802:3797819
WP_005013747.1|3708519_3709470_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929878.1|3709466_3710102_-	LysE family transporter	NA	NA	NA	NA	NA
WP_003818466.1|3710231_3711131_+	LysR family transcriptional regulator ArgP	NA	NA	NA	NA	NA
WP_003807278.1|3711226_3711718_+	copper chaperone PCu(A)C	NA	NA	NA	NA	NA
WP_010929877.1|3711764_3712730_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929876.1|3713863_3715105_+	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	24.9	1.9e-14
WP_003807287.1|3715218_3716235_+	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	43.8	3.5e-75
WP_010929875.1|3716269_3716746_-	membrane protein	NA	NA	NA	NA	NA
WP_003807291.1|3716888_3717797_-	hydroxymethylglutaryl-CoA lyase	NA	NA	NA	NA	NA
WP_010929874.1|3717910_3719023_-	DNA-protecting protein DprA	NA	S6BFL3	Thermus_phage	35.0	1.9e-21
WP_023853429.1|3719123_3719609_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_003818477.1|3719745_3720996_+	kynureninase	NA	NA	NA	NA	NA
WP_003807300.1|3721097_3721610_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	43.3	8.5e-22
WP_005013747.1|3721708_3722659_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929873.1|3722724_3723663_+|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	35.7	1.4e-09
WP_010929872.1|3723685_3724312_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_003818481.1|3724308_3724965_-	HAD hydrolase-like protein	NA	NA	NA	NA	NA
WP_010929871.1|3724961_3725564_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929870.1|3725570_3726158_-	TIGR00730 family Rossman fold protein	NA	A0A2I2L3F0	Orpheovirus	23.3	1.1e-07
WP_010929869.1|3726338_3726908_+	bacterioferritin	NA	NA	NA	NA	NA
WP_003807313.1|3726978_3728298_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA	NA
WP_003807315.1|3728404_3728596_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
WP_010929868.1|3728847_3730137_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_010929867.1|3730291_3731287_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807322.1|3731371_3732046_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|3732042_3732993_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816336.1|3733154_3734396_+	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	25.2	4.0e-25
WP_010929866.1|3734392_3735337_+	arginase	NA	A0A0N9R043	Chrysochromulina_ericina_virus	33.3	9.5e-27
WP_005012067.1|3735455_3736406_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853484.1|3736365_3737295_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807759.1|3737348_3737684_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_010929865.1|3737728_3738493_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929864.1|3738516_3739257_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929863.1|3739264_3740818_-	acyl--CoA ligase	NA	A0A2K9L3I8	Tupanvirus	22.6	1.5e-13
WP_010929862.1|3740852_3741830_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_023853476.1|3742102_3742684_-	ureidoglycolate lyase	NA	NA	NA	NA	NA
WP_094145972.1|3742735_3749638_-	autotransporter BatB	NA	NA	NA	NA	NA
WP_003807750.1|3750084_3750216_-	entericidin A/B family lipoprotein	NA	NA	NA	NA	NA
WP_010929858.1|3750481_3750688_-	DUF3596 domain-containing protein	NA	NA	NA	NA	NA
WP_010929857.1|3751692_3752352_+	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_010929856.1|3752379_3753525_+	DSD1 family PLP-dependent enzyme	NA	NA	NA	NA	NA
3753162:3753179	attL	CAGCGTGCTGGCCACCGT	NA	NA	NA	NA
WP_003807743.1|3753665_3754001_+	YegP family protein	NA	NA	NA	NA	NA
WP_010929855.1|3754075_3754936_-	hypothetical protein	NA	A0A2C9D0H9	Yersinia_phage	53.6	1.7e-51
WP_010929854.1|3755199_3755901_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_019248860.1|3756070_3756466_+	RidA family protein	NA	NA	NA	NA	NA
WP_005012067.1|3756575_3757526_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929852.1|3757536_3758178_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010926414.1|3758344_3758587_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929851.1|3758685_3759636_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929850.1|3759671_3760139_+	hypothetical protein	NA	Q3HQX1	Burkholderia_phage	71.3	2.1e-43
WP_010926411.1|3760372_3760750_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010926410.1|3760746_3760929_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929849.1|3760932_3761919_+	DNA recombinase	NA	H9C0R8	Aeromonas_phage	57.3	2.0e-67
WP_010929848.1|3761915_3762563_+	YqaJ viral recombinase family protein	NA	A0A0U2BXF3	Paracoccus_phage	41.4	2.0e-31
WP_010929847.1|3762620_3763148_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247983.1|3763184_3764369_+	hypothetical protein	NA	A0A291L9X3	Bordetella_phage	37.8	1.5e-24
WP_010929845.1|3764379_3764721_+	hypothetical protein	NA	A0A0H5ARN8	Pseudomonas_phage	45.3	1.0e-10
WP_010926403.1|3764833_3765034_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929843.1|3765030_3766020_-|integrase	site-specific integrase	integrase	A0A1B1P9F9	Acinetobacter_phage	44.4	4.4e-75
WP_010929841.1|3767506_3769477_-	DUF3220 domain-containing protein	NA	NA	NA	NA	NA
WP_003814626.1|3769718_3770117_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929840.1|3770125_3771049_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3771506_3772457_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927254.1|3772687_3774379_-	membrane protein insertase YidC	NA	NA	NA	NA	NA
WP_003816027.1|3774427_3774700_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	52.2	7.0e-15
WP_003816026.1|3774696_3775068_-	ribonuclease P protein component	NA	NA	NA	NA	NA
WP_003816025.1|3775163_3775298_-	50S ribosomal protein L34	NA	NA	NA	NA	NA
WP_010929554.1|3775703_3777113_+	chromosomal replication initiator protein DnaA	NA	NA	NA	NA	NA
WP_010929839.1|3777115_3778225_+	DNA polymerase III subunit beta	NA	B4UTW9	Rhizobium_phage	32.6	1.2e-41
WP_010929838.1|3778319_3780773_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	34.8	2.3e-112
WP_023853625.1|3780891_3781683_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929836.1|3781802_3783230_+	amidase	NA	NA	NA	NA	NA
WP_010929835.1|3783268_3784240_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929834.1|3784658_3785822_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010929833.1|3785909_3786755_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3788311_3789262_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818201.1|3789816_3790191_-	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_010929807.1|3790265_3791324_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_005012067.1|3791347_3792298_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929808.1|3795179_3796349_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_003815953.1|3796449_3798057_+	methylcrotonoyl-CoA carboxylase	NA	A0A1B2ITV7	Pike_perch_iridovirus	57.3	5.4e-22
3797802:3797819	attR	CAGCGTGCTGGCCACCGT	NA	NA	NA	NA
WP_010929810.1|3798103_3800125_+	acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha	NA	NA	NA	NA	NA
WP_003815955.1|3800153_3800399_-	DUF1653 domain-containing protein	NA	NA	NA	NA	NA
WP_004565905.1|3800412_3801603_-	acetylornithine transaminase	NA	A0A1V0SKB7	Klosneuvirus	26.7	4.4e-21
WP_010929811.1|3801798_3802764_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929812.1|3802786_3803926_-	DSD1 family PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_010929813.1|3804137_3805100_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010929814.1|3805223_3807248_+	TRAP transporter permease	NA	NA	NA	NA	NA
WP_010929815.1|3807444_3809688_+	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA	NA
WP_003815964.1|3809966_3810425_+	DUF494 domain-containing protein	NA	NA	NA	NA	NA
WP_010929816.1|3811352_3813974_-	DUF4401 domain-containing protein	NA	NA	NA	NA	NA
WP_010929817.1|3814037_3816665_+	DNA topoisomerase III	NA	A0A0G2YA05	Acanthamoeba_polyphaga_mimivirus	25.4	6.1e-23
WP_010929818.1|3816816_3817881_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_020699616.1|3817880_3818651_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.9	8.1e-24
WP_010929819.1|3818659_3819493_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003818225.1|3819505_3820285_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929820.1|3820358_3821792_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929821.1|3821819_3822578_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929822.1|3822633_3824484_-	biosynthetic-type acetolactate synthase large subunit	NA	E4WLQ6	Ostreococcus_tauri_virus	30.4	2.2e-59
WP_010929823.1|3824577_3825054_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_023853391.1|3825070_3825991_-	bestrophin	NA	NA	NA	NA	NA
WP_003818232.1|3826097_3826598_+	SET domain-containing protein	NA	NA	NA	NA	NA
WP_010929826.1|3826971_3827664_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	41.6	6.3e-36
WP_010929591.1|3827972_3828923_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931556.1|3828919_3832693_-	methionine synthase	NA	A0A140XBC7	Dickeya_phage	50.8	8.6e-10
WP_010931557.1|3833029_3834919_+	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	30.8	7.6e-07
WP_010931558.1|3834930_3835824_+	cobalamin-binding protein	NA	NA	NA	NA	NA
WP_010931559.1|3835927_3836725_+	thiazole synthase	NA	NA	NA	NA	NA
WP_010931560.1|3836721_3837573_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_003817656.1|3837634_3838315_+	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	34.8	3.5e-15
WP_019247189.1|3838342_3838678_+	TolC family protein	NA	NA	NA	NA	NA
WP_019247190.1|3838678_3839638_+	TolC family outer membrane protein	NA	NA	NA	NA	NA
WP_003815102.1|3839658_3840147_-	D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase	NA	A0A1B1IUK5	uncultured_Mediterranean_phage	34.1	1.6e-17
WP_010931561.1|3840428_3841445_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 31
NZ_CP013081	Bordetella pertussis strain E602 chromosome, complete genome	4108490	4007558	4072470	4108490	transposase	Planktothrix_phage(40.0%)	59	NA	NA
WP_039249574.1|4007558_4008044_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_153302797.1|4008132_4008270_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931647.1|4008262_4009243_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019248461.1|4009509_4010319_+	pertussis toxin ADP-ribosyltransferase subunit PtxA	NA	NA	NA	NA	NA
WP_014906114.1|4010358_4011039_+	pertussis toxin binding subunit PtxB	NA	NA	NA	NA	NA
WP_010929491.1|4011032_4011491_+	pertussis toxin subunit 4	NA	NA	NA	NA	NA
WP_023853616.1|4011502_4011865_+	pertussis toxin binding subunit PtxD	NA	NA	NA	NA	NA
WP_010931651.1|4011947_4012631_+	pertussis toxin binding subunit PtxE	NA	NA	NA	NA	NA
WP_010929493.1|4012686_4012995_+	type IV secretion system protein PtlA	NA	NA	NA	NA	NA
WP_010929494.1|4013013_4013328_+	type IV secretion system protein PtlB	NA	NA	NA	NA	NA
WP_010931652.1|4013324_4015799_+	type IV secretion system protein PtlC	NA	NA	NA	NA	NA
WP_010931653.1|4015806_4017198_+	type IV secretion system protein PtlD	NA	NA	NA	NA	NA
WP_010929497.1|4017194_4017380_+	type IV secretion system protein PtlI	NA	NA	NA	NA	NA
WP_010929498.1|4017358_4018060_+	type IV secretion system peptidoglycanase PtlE	NA	NA	NA	NA	NA
WP_010931654.1|4018056_4018878_+	type IV secretion system protein PtlF	NA	NA	NA	NA	NA
WP_010931655.1|4018858_4019983_+	type IV secretion system protein PtlG	NA	NA	NA	NA	NA
WP_010929500.1|4019975_4020995_+	type IV secretion system protein PtlH	NA	NA	NA	NA	NA
WP_010931656.1|4021200_4022091_-	DMT family transporter	NA	NA	NA	NA	NA
WP_010929501.1|4022335_4023127_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003815873.1|4023209_4023584_+	DUF1232 domain-containing protein	NA	NA	NA	NA	NA
WP_010931658.1|4023561_4024971_+	DUF2868 domain-containing protein	NA	NA	NA	NA	NA
WP_003815876.1|4024963_4026346_+	GTPase/DUF3482 domain-containing protein	NA	A0A0R6PHS5	Moraxella_phage	38.9	9.9e-57
WP_003815878.1|4026680_4028285_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931659.1|4028362_4029334_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931660.1|4029344_4030271_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931661.1|4030661_4031612_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931662.1|4031781_4033008_+	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA	NA	NA	NA	NA
WP_010931663.1|4033207_4034074_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_003815027.1|4034066_4035029_+	Nudix family hydrolase	NA	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	53.4	1.9e-06
WP_010927663.1|4035129_4036080_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|4036178_4037129_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|4037227_4038178_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994937.1|4038174_4039668_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_003815032.1|4039664_4042772_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931665.1|4042768_4045837_-	MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931666.1|4045833_4047084_-	MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_023853184.1|4047264_4048017_-	cell division protein ZapD	NA	NA	NA	NA	NA
WP_010931667.1|4048058_4048703_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_010931668.1|4048711_4049692_-	prepilin peptidase	NA	NA	NA	NA	NA
WP_003815047.1|4049791_4050535_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815049.1|4050617_4050965_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003815051.1|4051062_4051905_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_003815053.1|4051949_4052837_-	segregation/condensation protein A	NA	NA	NA	NA	NA
WP_003815055.1|4052863_4053052_-	DUF3460 family protein	NA	NA	NA	NA	NA
WP_010931669.1|4053149_4054607_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_010931670.1|4054593_4056120_+	glycerol kinase GlpK	NA	NA	NA	NA	NA
WP_003815061.1|4056138_4056606_-	membrane protein	NA	NA	NA	NA	NA
WP_010931671.1|4056605_4057628_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003815064.1|4057748_4058489_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	4.4e-35
WP_003815066.1|4058543_4059644_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815068.1|4059645_4060836_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815070.1|4060955_4061972_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	42.1	1.0e-71
WP_003815073.1|4062290_4062962_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	38.2	9.5e-29
WP_010927126.1|4062958_4063867_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_010931672.1|4064078_4064726_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA	NA
WP_033446142.1|4068586_4069654_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
WP_003815084.1|4069664_4070474_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815086.1|4070563_4071337_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_010930363.1|4071519_4072470_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
