The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP013882	Bordetella pertussis strain H876 chromosome, complete genome	4105347	27282	71085	4105347	tRNA,transposase	Synechococcus_phage(50.0%)	42	NA	NA
WP_010930363.1|27282_28233_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995007.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929578.1|28674_29109_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247164.1|29141_30359_-	thiolase family protein	NA	NA	NA	NA	NA
WP_010929580.1|30364_30862_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_019247165.1|31069_32005_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929582.1|32214_33006_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929583.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010929584.1|34625_35576_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814398.1|35572_36763_-	MFS transporter	NA	NA	NA	NA	NA
WP_010929585.1|37012_37924_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010929586.1|37925_40064_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003814404.1|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|41318_42212_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247766.1|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|42687_43218_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_023852754.1|43346_43646_-	DUF1974 domain-containing protein	NA	NA	NA	NA	NA
WP_010929588.1|43663_44614_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929589.1|45200_45749_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|45720_45957_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|46084_46978_+	membrane protein	NA	NA	NA	NA	NA
WP_010929590.1|49196_50444_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|50440_51055_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_010929591.1|51190_52141_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443813.1|52183_53440_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|54671_55406_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|55411_56002_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|56026_56716_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|56712_57474_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|57553_58453_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|58546_59497_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929595.1|60297_61524_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_047122776.1|61523_61937_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929597.1|62126_63068_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248755.1|63491_64466_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929599.1|64522_65104_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010929600.1|65116_65419_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_029443770.1|65537_66596_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_019247832.1|66630_67902_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010929603.1|68531_69713_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929584.1|70134_71085_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP013882	Bordetella pertussis strain H876 chromosome, complete genome	4105347	78683	137157	4105347	tRNA,transposase	Planktothrix_phage(22.22%)	54	NA	NA
WP_005012067.1|78683_79634_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166334.1|79708_80653_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929608.1|80649_82524_-	polysaccharide biosynthesis protein	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
WP_003807102.1|83871_84576_-	DUF2837 family protein	NA	NA	NA	NA	NA
WP_003807104.1|84572_85679_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010929610.1|85940_86534_-	sugar transferase	NA	NA	NA	NA	NA
WP_023853419.1|86530_87718_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	NA	NA	NA	NA
WP_010929612.1|87780_89040_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010929613.1|89063_90152_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
WP_010929614.1|90159_91260_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
WP_003807114.1|91263_91839_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_003807115.1|91842_92895_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_010929615.1|93025_94033_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
WP_010929616.1|94034_95321_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
WP_003807124.1|95337_95493_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929617.1|95517_96321_-	type III pantothenate kinase	NA	NA	NA	NA	NA
WP_010929618.1|96317_97184_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_010929619.1|97258_98389_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003807131.1|98388_99228_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
WP_010929620.1|100160_100763_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929621.1|100792_101446_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003807138.1|101578_102835_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
WP_023853421.1|102915_103782_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_003818417.1|103857_104133_+	YbeD family protein	NA	NA	NA	NA	NA
WP_010929623.1|104140_104803_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
WP_003807146.1|104864_105866_+	lipoyl synthase	NA	NA	NA	NA	NA
WP_003807148.1|105880_106429_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
WP_010929624.1|106486_107383_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_010929625.1|107379_108441_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
WP_010929626.1|108476_109427_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929627.1|110326_111520_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_010929628.1|111601_112231_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_010927242.1|112292_112976_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_023853376.1|112985_114668_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003815933.1|114955_115303_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
WP_003815930.1|115393_115711_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|115993_117010_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815929.1|117085_117886_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003815927.1|117882_118758_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010929633.1|118768_120061_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929634.1|120103_121144_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
WP_010929635.1|121249_122071_-	phosphodiesterase	NA	NA	NA	NA	NA
WP_005012067.1|122171_123122_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905488.1|123220_124126_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.7	9.8e-21
WP_003815918.1|124122_124956_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010929637.1|125792_126803_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_019247800.1|126799_127189_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_033446324.1|128070_129336_+	amidase	NA	NA	NA	NA	NA
WP_010929639.1|129426_131127_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_010929640.1|131553_132201_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853393.1|132199_133639_+	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_023853394.1|133749_134034_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_010929512.1|134061_134940_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|136206_137157_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP013882	Bordetella pertussis strain H876 chromosome, complete genome	4105347	165942	226465	4105347	tRNA,protease,transposase	Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)	51	NA	NA
WP_005013747.1|165942_166893_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929659.1|168336_169239_-	YgcG family protein	NA	NA	NA	NA	NA
WP_003815889.1|169216_169846_-	LemA family protein	NA	NA	NA	NA	NA
WP_010929660.1|170128_171559_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.8	5.8e-44
WP_010929661.1|171592_172222_+	LysE family transporter	NA	NA	NA	NA	NA
WP_003815895.1|172270_173878_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
WP_010929663.1|173902_174586_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815898.1|174667_175144_-	bacterioferritin	NA	NA	NA	NA	NA
WP_010929591.1|175350_176301_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929664.1|177416_177944_+	META domain-containing protein	NA	NA	NA	NA	NA
WP_010929665.1|178035_178851_+	META and DUF4377 domain-containing protein	NA	NA	NA	NA	NA
WP_003808370.1|178911_179646_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_010929666.1|179683_181762_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
WP_003808374.1|182011_182284_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446322.1|182385_183471_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010929668.1|183474_185379_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA	NA
WP_023999174.1|185375_189062_+	DUF490 domain-containing protein	NA	NA	NA	NA	NA
WP_010929670.1|189122_189686_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
WP_003808385.1|189693_190116_-	glyoxalase	NA	NA	NA	NA	NA
WP_010929671.1|190143_190563_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_077274090.1|190591_191038_-	GNAT family N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	29.4	1.2e-08
WP_003808391.1|191164_191662_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003808393.1|191816_194087_+	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA	NA
WP_019249381.1|194162_195368_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010929591.1|195466_196417_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929673.1|196519_197155_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.8e-83
WP_019248671.1|197151_198045_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_010929675.1|198439_199540_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_010929676.1|199621_199996_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_010929677.1|200055_202920_+	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
WP_010929678.1|203064_203805_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929679.1|203874_205086_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929680.1|205114_206083_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005013747.1|206696_207647_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929699.1|207803_208127_+	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
WP_023853200.1|208231_209272_-	cyclase	NA	NA	NA	NA	NA
WP_010929697.1|209277_210057_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
WP_003807672.1|210102_210399_-	YciI family protein	NA	NA	NA	NA	NA
WP_003807674.1|210424_210700_-	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
WP_003819086.1|210756_211401_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010929696.1|211400_212087_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_033446325.1|212285_213068_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929694.1|213118_213844_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929693.1|213875_215225_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929692.1|215336_216269_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_033446404.1|216726_219522_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
WP_023994893.1|220115_222959_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_010929689.1|223129_223849_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_010929688.1|223887_224436_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929687.1|224590_225490_+	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_005012808.1|225514_226465_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP013882	Bordetella pertussis strain H876 chromosome, complete genome	4105347	234397	287985	4105347	tRNA,protease,transposase	Bacillus_phage(25.0%)	48	NA	NA
WP_005012067.1|234397_235348_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|235434_236385_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930742.1|236381_237332_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929700.1|237430_238228_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003814363.1|239177_239588_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA	NA
WP_003814358.1|240609_241353_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814356.1|241396_242440_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814355.1|242610_244713_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_077069230.1|246123_247080_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929701.1|247098_247590_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_010929702.1|247586_248942_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
WP_010929703.1|248942_249641_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_010929704.1|249637_250339_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_003814339.1|250591_251641_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
WP_003814337.1|251746_252688_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_010929705.1|252684_254574_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
WP_033446171.1|254678_255299_+	membrane protein	NA	NA	NA	NA	NA
WP_019247543.1|255441_256827_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
WP_010929706.1|256757_257294_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_010929707.1|257445_258837_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_010929708.1|258853_259834_-	AEC family transporter	NA	NA	NA	NA	NA
WP_003814324.1|259969_260953_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
WP_010929709.1|261017_261917_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814321.1|262023_263778_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_010929710.1|263785_264910_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929711.1|264923_265904_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|266634_267585_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929712.1|268144_268690_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852659.1|268815_270393_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004567834.1|270408_271563_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_003817696.1|271576_271702_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_010929714.1|271698_273450_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
WP_010929715.1|273446_275126_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
WP_010929716.1|275188_275737_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.3e-28
WP_010929717.1|276879_277158_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|278201_279152_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077068974.1|279138_279354_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929718.1|279429_279591_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_010929719.1|279598_279739_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815821.1|280257_280707_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
WP_003815819.1|280716_281328_-	stringent starvation protein A	NA	NA	NA	NA	NA
WP_010929720.1|281486_282335_-	cytochrome c1	NA	NA	NA	NA	NA
WP_003815816.1|282360_283743_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_003815815.1|283807_284449_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_010929721.1|284588_285047_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_010927226.1|285071_285848_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_014906092.1|285901_287038_+|protease	trypsin-like serine protease	protease	W5SAB9	Pithovirus	31.2	1.2e-07
WP_005015810.1|287034_287985_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
NZ_CP013882	Bordetella pertussis strain H876 chromosome, complete genome	4105347	556370	615670	4105347	tRNA,transposase	Acinetobacter_phage(27.27%)	48	NA	NA
WP_023852617.1|556370_557321_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003815367.1|558644_559421_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931383.1|559455_561228_+	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931382.1|561229_562132_-	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_003817821.1|562256_562616_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931381.1|562647_563610_+|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_005012067.1|563708_564659_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931380.1|564671_565607_-	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_010931379.1|565666_566506_-	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931378.1|566502_567672_-	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_003815379.1|567668_568958_-	murein transglycosylase A	NA	NA	NA	NA	NA
WP_003815381.1|569000_569375_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_023852620.1|569489_570218_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_010931377.1|570225_570930_+	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_010931376.1|571193_572714_+	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_003815390.1|572769_573333_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_003817833.1|573351_574383_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_010931375.1|574379_575168_+	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_019247413.1|575188_575347_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023997720.1|575343_576333_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|578089_579040_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931374.1|580262_581165_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814312.1|581166_582021_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931373.1|582067_583177_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931372.1|583187_583706_-	flavin reductase family protein	NA	NA	NA	NA	NA
WP_003814302.1|583735_584368_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_003814300.1|584439_585099_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_023852703.1|585095_586235_-	MFS transporter	NA	NA	NA	NA	NA
WP_019247745.1|586584_587457_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_010931370.1|587612_588350_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931369.1|588352_589984_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931368.1|590079_591069_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010927020.1|591065_591776_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931363.1|591871_592888_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814287.1|593159_593786_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931367.1|593841_594969_-	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
WP_003814283.1|594974_600692_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
WP_003814277.1|601259_602204_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
WP_003814275.1|602392_603328_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_010931365.1|603445_605017_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247692.1|605096_606305_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931364.1|606853_607720_+	DMT family transporter	NA	NA	NA	NA	NA
WP_003814254.1|610080_610302_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_010929632.1|610632_611649_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814252.1|611733_611985_-	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_003814250.1|611988_612804_-	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_010931362.1|612916_613795_-	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003820957.1|613906_615670_-|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
>prophage 7
NZ_CP013882	Bordetella pertussis strain H876 chromosome, complete genome	4105347	621825	675566	4105347	transposase	Salmonella_phage(33.33%)	48	NA	NA
WP_010930179.1|621825_622776_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994844.1|622871_623843_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931357.1|623847_624528_-	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_003814742.1|624665_625058_+	OsmC family protein	NA	NA	NA	NA	NA
WP_010931561.1|625165_626182_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814739.1|626421_627207_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931356.1|627301_628711_-	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_010927090.1|628721_629522_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931355.1|629542_630313_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_010931354.1|630355_630823_+	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_005013747.1|630819_631770_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818344.1|633718_634597_-	fatty acid desaturase	NA	NA	NA	NA	NA
WP_019247959.1|635523_638502_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931070.1|638855_639806_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931353.1|639802_640891_-	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_010931352.1|640926_641790_-	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931351.1|642929_643319_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014486103.1|643322_644105_-	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_047122778.1|644138_644924_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931349.1|645199_646339_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931348.1|646335_647127_+	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931347.1|647123_647873_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931346.1|647869_648742_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_004566224.1|648741_649743_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003808195.1|649739_650903_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003808193.1|650928_651612_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247312.1|651565_652900_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931344.1|652892_653987_+	CoA transferase	NA	NA	NA	NA	NA
WP_005012067.1|654753_655704_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931343.1|657644_658904_+	YeaH/YhbH family protein	NA	NA	NA	NA	NA
WP_003814858.1|658900_660439_+	SpoVR family protein	NA	NA	NA	NA	NA
WP_003814856.1|660435_661632_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931342.1|661628_663005_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003814852.1|663016_664033_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010927102.1|664101_665337_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010931341.1|665437_666232_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929282.1|666601_667009_+	GFA family protein	NA	NA	NA	NA	NA
WP_010929281.1|667426_667699_-	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_124740609.1|667868_668093_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814832.1|668280_669135_+	urease accessory protein UreD	NA	NA	NA	NA	NA
WP_010931340.1|669235_669538_+	urease subunit gamma	NA	NA	NA	NA	NA
WP_003814828.1|669582_670200_+	HupE/UreJ family protein	NA	NA	NA	NA	NA
WP_010931338.1|670216_670525_+	urease subunit beta	NA	NA	NA	NA	NA
WP_010931337.1|670521_672237_+	urease subunit alpha	NA	NA	NA	NA	NA
WP_014905506.1|672239_672857_+	urease accessory protein UreE	NA	NA	NA	NA	NA
WP_019247677.1|672957_673542_+	urease accessory protein UreF	NA	NA	NA	NA	NA
WP_010931336.1|673566_674211_+	urease accessory protein UreG	NA	NA	NA	NA	NA
WP_023995489.1|674615_675566_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 8
NZ_CP013882	Bordetella pertussis strain H876 chromosome, complete genome	4105347	724504	764454	4105347	protease,tRNA,integrase,transposase	Pseudomonas_phage(33.33%)	29	721752:721770	741640:741658
721752:721770	attL	CTGCCTGGCGTGGCCGAGT	NA	NA	NA	NA
WP_010931308.1|724504_725101_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931307.1|725097_725880_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_010931306.1|725952_727044_+	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_010931305.1|727323_728451_+|integrase	site-specific integrase	integrase	A0A1B0VMI6	Pseudomonas_phage	33.6	1.4e-48
WP_010931304.1|728792_729839_+	Fic family protein	NA	NA	NA	NA	NA
WP_019247951.1|730349_733106_+	DEAD/DEAH box helicase family protein	NA	NA	NA	NA	NA
WP_010931302.1|733107_736059_+	restriction endonuclease subunit M	NA	G8I4P9	Mycobacterium_phage	25.1	2.9e-21
WP_010931301.1|736074_737286_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_076879586.1|737282_737483_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062826579.1|737469_738420_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_077274087.1|738436_738931_+	DUF4276 family protein	NA	NA	NA	NA	NA
WP_019247740.1|738934_739192_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019248455.1|739735_740647_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_029443992.1|740728_741013_+	ATP-dependent helicase	NA	A0A1V0SIN4	Klosneuvirus	34.1	6.8e-05
WP_005012067.1|741796_742747_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
741640:741658	attR	ACTCGGCCACGCCAGGCAG	NA	NA	NA	NA
WP_019247178.1|743165_745730_-	autotransporter domain-containing protein	NA	NA	NA	NA	NA
WP_019247179.1|745774_747628_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014905963.1|747960_749532_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|750973_751924_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905961.1|752009_752750_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247274.1|752976_753918_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|755311_756262_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814139.1|756455_757271_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931299.1|757403_758843_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003814142.1|758856_759198_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010931298.1|759252_760908_+	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
WP_003814146.1|761059_762070_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003814148.1|762202_762976_+	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012067.1|763503_764454_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP013882	Bordetella pertussis strain H876 chromosome, complete genome	4105347	774381	821999	4105347	tRNA,protease,transposase,holin	Bovine_alphaherpesvirus(10.0%)	46	NA	NA
WP_005012808.1|774381_775332_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818450.1|775470_776223_+	uracil-DNA glycosylase	NA	A0A1Y0B680	Bovine_alphaherpesvirus	47.5	2.5e-46
WP_023853440.1|776497_778186_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.9	1.6e-48
WP_023995245.1|778274_779465_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931274.1|779479_780574_-|tRNA	CCA tRNA nucleotidyltransferase	tRNA	A0A0F6YPT7	Sinorhizobium_phage	50.5	2.4e-50
WP_010931275.1|780570_782634_-	lytic transglycosylase domain-containing protein	NA	A0A0S2SXL7	Bacillus_phage	36.6	5.3e-14
WP_010931276.1|782709_783390_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
WP_003807204.1|783667_785041_+	MHS family MFS transporter	NA	NA	NA	NA	NA
WP_003818444.1|785042_786062_+	histone deacetylase family protein	NA	A0A2K9L473	Tupanvirus	31.7	3.4e-22
WP_003818443.1|786125_787097_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|787161_788112_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003807199.1|788210_789053_-	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA	NA
WP_010931277.1|789052_789388_-|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_010931278.1|789458_790877_-	adenosylhomocysteinase	NA	S4VPF6	Pandoravirus	29.4	8.7e-40
WP_003807194.1|791156_792197_-	glycosyltransferase family 1 protein	NA	NA	NA	NA	NA
WP_003818441.1|792276_792528_-	DUF1289 domain-containing protein	NA	NA	NA	NA	NA
WP_010925730.1|792638_793802_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	60.8	5.0e-126
WP_010931279.1|794085_794940_+	lysophospholipid acyltransferase family protein	NA	NA	NA	NA	NA
WP_010931280.1|794936_795827_+	lysophospholipid acyltransferase family protein	NA	NA	NA	NA	NA
WP_003807183.1|795869_796781_+	diaminopimelate epimerase	NA	NA	NA	NA	NA
WP_010931281.1|796807_797500_+	DUF484 family protein	NA	NA	NA	NA	NA
WP_010931282.1|797514_798495_+	tyrosine recombinase XerC	NA	A0A166YH27	Gordonia_phage	30.5	3.3e-14
WP_010931283.1|798507_800649_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_003818434.1|800697_801666_-	putative membrane protein	NA	NA	NA	NA	NA
WP_019247300.1|801656_802325_-	DUF1007 family protein	NA	NA	NA	NA	NA
WP_010931286.1|802285_803221_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931287.1|803217_804114_-	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_010931288.1|804110_804833_-	metal ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	30.0	1.1e-11
WP_019248127.1|804823_804988_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003807166.1|805161_805665_+	transcriptional repressor	NA	NA	NA	NA	NA
WP_010931290.1|805941_807057_+	GTP-binding protein	NA	NA	NA	NA	NA
WP_003807164.1|807199_807664_+	RNA polymerase-binding protein DksA	NA	NA	NA	NA	NA
WP_010931291.1|807811_808351_+|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_003807162.1|808372_809707_+|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A191ZC11	Erwinia_phage	29.6	3.5e-43
WP_003807161.1|809720_810026_-	copper-binding protein	NA	NA	NA	NA	NA
WP_023853416.1|810450_811032_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA	NA
WP_005013747.1|811113_812064_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|812162_813113_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814620.1|813553_814459_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931271.1|814514_816122_-	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
WP_010931270.1|816375_817881_-	tripartite tricarboxylate transporter permease	NA	NA	NA	NA	NA
WP_003820744.1|817895_818360_-	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA	NA
WP_005012067.1|818649_819600_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820745.1|819762_820293_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814611.1|820292_820604_+	cell division protein ZapA	NA	NA	NA	NA	NA
WP_005012808.1|821048_821999_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP013882	Bordetella pertussis strain H876 chromosome, complete genome	4105347	997857	1100250	4105347	tRNA,transposase	Bacillus_virus(27.27%)	94	NA	NA
WP_003813026.1|997857_998973_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_003813022.1|999073_999892_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_010931185.1|999989_1000601_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_010931184.1|1000760_1002137_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	47.5	2.2e-109
WP_003813017.1|1002199_1002658_+	cytochrome c	NA	NA	NA	NA	NA
WP_003813013.1|1002742_1003438_-	cytochrome b561	NA	NA	NA	NA	NA
WP_003813010.1|1003499_1003781_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931182.1|1004343_1005096_+	DUF3053 domain-containing protein	NA	NA	NA	NA	NA
WP_003813006.1|1005140_1006217_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_005012067.1|1006213_1007164_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486100.1|1007266_1007929_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019249309.1|1008023_1008194_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003818702.1|1009550_1010747_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486098.1|1010767_1011571_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_019247598.1|1011651_1011948_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247597.1|1011978_1012542_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014486097.1|1012582_1013440_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003818698.1|1013447_1014197_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.5	6.2e-29
WP_014486096.1|1014218_1015091_+	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_014486095.1|1015119_1015899_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486094.1|1015932_1016730_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003808978.1|1019384_1019777_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486091.1|1019770_1020631_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003818691.1|1020634_1021597_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_014486089.1|1022373_1023063_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.8	4.8e-12
WP_010930208.1|1023923_1024874_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931181.1|1025223_1026093_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010926062.1|1026163_1026859_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_010931179.1|1026848_1027358_+	nucleoside deaminase	NA	NA	NA	NA	NA
WP_010931178.1|1027354_1028575_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931177.1|1028522_1029425_-	transcriptional regulator GcvA	NA	NA	NA	NA	NA
WP_023997744.1|1030311_1031598_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931176.1|1031636_1033010_+	amidase	NA	NA	NA	NA	NA
WP_010931175.1|1033048_1033750_-	riboflavin synthase	NA	NA	NA	NA	NA
WP_010931174.1|1034048_1035038_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003809010.1|1035138_1035600_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931173.1|1035615_1036164_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931172.1|1036305_1037781_-	acyl--CoA ligase	NA	Q75ZG1	Hepacivirus	25.6	3.0e-35
WP_010931171.1|1037886_1038978_+	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
WP_010931170.1|1038981_1039764_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931169.1|1039773_1040562_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.0	1.1e-33
WP_010931168.1|1041687_1042122_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_010931167.1|1042118_1043129_-	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_003809025.1|1043172_1044099_-	VOC family protein	NA	NA	NA	NA	NA
WP_003809026.1|1044385_1044754_+	DUF861 domain-containing protein	NA	NA	NA	NA	NA
WP_023853143.1|1044970_1045921_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931165.1|1045965_1048392_+	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	33.8	1.2e-86
WP_010931164.1|1048440_1049133_+	HD domain-containing protein	NA	A0A1D6Y7U0	Golden_Marseillevirus	29.9	4.7e-07
WP_010931163.1|1049205_1050405_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_003819549.1|1050422_1051328_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931162.1|1051443_1052373_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010931161.1|1052398_1053745_+	MFS transporter	NA	NA	NA	NA	NA
WP_019247888.1|1053757_1054522_+	SDR family oxidoreductase	NA	A0A0M4JSW6	Mollivirus	26.5	3.1e-12
WP_010931159.1|1054535_1055318_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_005012067.1|1055510_1056461_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931158.1|1056522_1057632_-	porin	NA	NA	NA	NA	NA
WP_003815281.1|1058144_1058981_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
WP_010931157.1|1059107_1060016_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|1060012_1060963_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023998107.1|1060980_1061151_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247492.1|1061348_1061891_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1062926_1063877_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247402.1|1064118_1064487_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019248356.1|1064532_1065657_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003820818.1|1066791_1067532_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931155.1|1067635_1068256_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852714.1|1068359_1069310_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931154.1|1069306_1071415_-	AsmA family protein	NA	NA	NA	NA	NA
WP_023996698.1|1071559_1072171_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_003820813.1|1072250_1072715_-	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_019248355.1|1072990_1073176_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931153.1|1073227_1073980_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931152.1|1073986_1075249_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_023852748.1|1075290_1076529_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820806.1|1077606_1078734_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_003814524.1|1078744_1079572_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_010931150.1|1079558_1080425_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010931149.1|1081791_1082196_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|1082287_1083238_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_155120814.1|1083255_1083420_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033446288.1|1083607_1084519_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003820799.1|1084533_1085244_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931147.1|1085240_1086485_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003820797.1|1086486_1086921_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_003814535.1|1086949_1087255_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_005012067.1|1087353_1088304_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994659.1|1088360_1089509_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_010930176.1|1089589_1090540_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931144.1|1091071_1091869_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247918.1|1091916_1092570_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003814544.1|1092526_1093615_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_003814547.1|1093779_1096005_-	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_023852715.1|1098282_1099179_+	inositol monophosphatase	NA	NA	NA	NA	NA
WP_005012067.1|1099299_1100250_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_CP013882	Bordetella pertussis strain H876 chromosome, complete genome	4105347	1130636	1201607	4105347	protease,transposase	uncultured_Mediterranean_phage(25.0%)	52	NA	NA
WP_005012808.1|1130636_1131587_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_151243721.1|1131658_1132756_+	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_005012067.1|1135139_1136090_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853341.1|1136689_1137457_+	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_003812908.1|1137574_1137838_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931128.1|1137938_1138943_-	DUF4880 domain-containing protein	NA	NA	NA	NA	NA
WP_010931127.1|1139143_1140745_-	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931126.1|1140770_1141529_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931125.1|1141620_1142277_-	adenylate kinase	NA	NA	NA	NA	NA
WP_010931124.1|1142367_1143132_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003812895.1|1143141_1143330_-	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931123.1|1143385_1144429_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_010931122.1|1144425_1144839_-	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_003812889.1|1144835_1145456_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_005012067.1|1145736_1146687_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931120.1|1146854_1148246_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_010931119.1|1148318_1148897_+	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_019247560.1|1149013_1150411_+	chloride channel protein	NA	NA	NA	NA	NA
WP_010931117.1|1150526_1151732_+	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_003820399.1|1151831_1152350_-	hypothetical protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_003812875.1|1152444_1152690_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820400.1|1152917_1153232_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_023853340.1|1153330_1158511_+	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_010931115.1|1158507_1160676_+	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_010931114.1|1160731_1163047_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.1e-164
WP_003820402.1|1163051_1164371_+	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_014905522.1|1164389_1166063_+	MCE family protein	NA	NA	NA	NA	NA
WP_010931111.1|1166067_1166736_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_010931110.1|1166892_1170714_+	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930800.1|1171044_1171995_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812857.1|1172016_1173162_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|1173310_1174240_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812851.1|1174236_1175325_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_010931109.1|1175321_1176125_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812846.1|1176121_1176853_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931108.1|1176910_1178200_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931107.1|1178296_1178899_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812839.1|1183452_1183791_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931105.1|1184498_1184765_+	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_005012067.1|1186471_1187422_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931103.1|1187418_1188750_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931102.1|1190010_1192011_+	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_003819722.1|1192003_1192645_+	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_003809276.1|1192641_1193049_+	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_010931101.1|1193045_1193846_+	SURF1 family protein	NA	NA	NA	NA	NA
WP_010931100.1|1193920_1194625_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931099.1|1194656_1195451_+	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_010931070.1|1195447_1196398_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|1196496_1197447_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812014.1|1197545_1197980_-	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_010931098.1|1198062_1200399_+	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.8	3.2e-124
WP_010929632.1|1200590_1201607_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_CP013882	Bordetella pertussis strain H876 chromosome, complete genome	4105347	1249001	1329876	4105347	tRNA,transposase	Bacillus_virus(25.0%)	58	NA	NA
WP_010927663.1|1249001_1249952_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931070.1|1249948_1250899_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931069.1|1251159_1252188_-	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010931068.1|1252267_1253566_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_023853219.1|1253562_1254099_-	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010931067.1|1254456_1258503_+	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
WP_010931066.1|1258743_1266405_+	filamentous hemagglutinin N-terminal domain-containing protein	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
WP_005012067.1|1266401_1267352_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931065.1|1268491_1268965_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931064.1|1269104_1269725_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
WP_162832304.1|1269869_1270661_+	aldolase	NA	NA	NA	NA	NA
WP_003810897.1|1270715_1271807_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931062.1|1271828_1272272_-	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_010931061.1|1272300_1272933_-	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA	NA
WP_003810909.1|1273043_1273460_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931060.1|1273452_1274145_+	DUF2238 domain-containing protein	NA	NA	NA	NA	NA
WP_010931059.1|1274251_1274626_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931058.1|1274702_1275512_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931057.1|1275607_1276552_+	dihydrodipicolinate synthase family protein	NA	NA	NA	NA	NA
WP_003816577.1|1276590_1277562_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003810921.1|1277652_1278090_-	carboxypeptidase regulatory-like domain-containing protein	NA	NA	NA	NA	NA
WP_010931055.1|1278148_1278952_-	NRDE family protein	NA	NA	NA	NA	NA
WP_010931054.1|1280033_1280894_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010931053.1|1280926_1282309_+	FAD-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	28.4	7.9e-30
WP_010931052.1|1282305_1283325_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247407.1|1283697_1284192_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931051.1|1284199_1284940_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931050.1|1285020_1286625_-	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA	NA
WP_010931049.1|1286664_1287453_-	DeoR family transcriptional regulator	NA	A0A077SK06	Escherichia_phage	30.4	2.0e-22
WP_023995127.1|1287578_1289744_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.1	1.9e-14
WP_010931047.1|1290624_1291437_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_004568502.1|1291449_1291758_+	DUF2160 domain-containing protein	NA	NA	NA	NA	NA
WP_010931046.1|1291875_1293606_+	carbohydrate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019249399.1|1293607_1294753_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931044.1|1294882_1295551_-	DUF502 domain-containing protein	NA	NA	NA	NA	NA
WP_003810957.1|1295672_1296140_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_019247521.1|1296275_1297658_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_014486086.1|1297654_1298779_+	DNA repair exonuclease	NA	NA	NA	NA	NA
WP_010931042.1|1298775_1301412_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010931070.1|1301827_1302778_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931041.1|1306524_1307136_-	DUF2239 family protein	NA	NA	NA	NA	NA
WP_003812368.1|1307358_1308819_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.3	1.6e-97
WP_010931040.1|1308915_1310508_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	33.3	1.0e-17
WP_019247974.1|1310861_1311119_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003816876.1|1311120_1312461_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010931038.1|1312556_1313246_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247976.1|1313258_1314689_+	MFS transporter	NA	NA	NA	NA	NA
WP_014905903.1|1316413_1317235_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931036.1|1317245_1318817_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010931035.1|1318845_1319823_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931034.1|1319849_1320653_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.2	2.7e-30
WP_010931033.1|1320649_1321444_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003816890.1|1321451_1322687_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_019247978.1|1322700_1323114_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|1323863_1324814_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931031.1|1325435_1327163_-	sulfate permease	NA	NA	NA	NA	NA
WP_010931030.1|1327274_1328633_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_005013747.1|1328925_1329876_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP013882	Bordetella pertussis strain H876 chromosome, complete genome	4105347	1449271	1513487	4105347	tRNA,protease,transposase	Salmonella_phage(16.67%)	60	NA	NA
WP_005013747.1|1449271_1450222_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814065.1|1450388_1450742_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814063.1|1450754_1451117_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814061.1|1451158_1451584_-	DUF1841 family protein	NA	NA	NA	NA	NA
WP_003814059.1|1451786_1453043_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	64.8	1.2e-11
WP_003814057.1|1453241_1454222_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005015028.1|1454371_1455613_+	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1455711_1456662_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814052.1|1456670_1457366_-	two-component system response regulator KdpE	NA	NA	NA	NA	NA
WP_003814050.1|1460187_1460787_-	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
WP_010930950.1|1460797_1462963_-	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	27.1	1.2e-24
WP_010930949.1|1462986_1464771_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA	NA
WP_017685545.1|1464770_1464860_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_003814042.1|1465554_1465827_+	DUF4212 domain-containing protein	NA	NA	NA	NA	NA
WP_003814040.1|1465826_1467893_+	cation acetate symporter	NA	NA	NA	NA	NA
WP_010929577.1|1467889_1468840_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|1468938_1469889_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005015014.1|1470004_1470337_-	multidrug transporter	NA	NA	NA	NA	NA
WP_010929073.1|1470333_1471020_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930948.1|1471006_1471966_-	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
WP_010930947.1|1471998_1474368_+	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
WP_010930946.1|1474367_1475000_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_010930945.1|1475101_1476442_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
WP_010930944.1|1476488_1477844_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
WP_005014990.1|1478134_1478371_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814024.1|1478558_1478876_-	virulence factor	NA	NA	NA	NA	NA
WP_003814023.1|1479148_1479664_-	hypothetical protein	NA	T1SAR8	Salmonella_phage	44.6	5.1e-06
WP_003814022.1|1479757_1479919_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814021.1|1479934_1480690_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_019247690.1|1481028_1481235_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814020.1|1481242_1481902_-	NAAT family transporter	NA	NA	NA	NA	NA
WP_010930941.1|1482196_1484401_-	TonB-dependent alcaligin siderophore receptor FauA	NA	NA	NA	NA	NA
WP_010930940.1|1484511_1485735_-	alcaligin siderophore export MFS transporter Bcr	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
WP_003814017.1|1485857_1486832_-	alcaligin siderophore biosynthesis transcriptional regulator AlcR	NA	NA	NA	NA	NA
WP_005013753.1|1486899_1488093_-	alcaligin siderophore biosynthesis protein AlcE	NA	NA	NA	NA	NA
WP_003814016.1|1488107_1488908_-	alcaligin siderophore biosynthesis protein AlcD	NA	NA	NA	NA	NA
WP_010930939.1|1488904_1490761_-	alcaligin siderophore biosynthesis protein AlcC	NA	NA	NA	NA	NA
WP_003814014.1|1490757_1491363_-	alcaligin siderophore biosynthesis protein AlcB	NA	NA	NA	NA	NA
WP_003814013.1|1491381_1492767_-	alcaligin siderophore biosynthesis protein AlcA	NA	NA	NA	NA	NA
WP_003814012.1|1493492_1494719_+	transporter	NA	NA	NA	NA	NA
WP_003814011.1|1494807_1495590_+	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|1495688_1496639_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814010.1|1496665_1497439_+	peroxide stress protein YaaA	NA	NA	NA	NA	NA
WP_003814009.1|1497450_1498692_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930938.1|1500508_1501336_-	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA	NA
WP_010930937.1|1501337_1502048_-	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_003821345.1|1502044_1502644_-	septum formation protein Maf	NA	NA	NA	NA	NA
WP_010930936.1|1502752_1503346_+	DUF177 domain-containing protein	NA	NA	NA	NA	NA
WP_003813827.1|1503397_1503580_+	50S ribosomal protein L32	NA	NA	NA	NA	NA
WP_003821347.1|1503636_1504695_+	phosphate acyltransferase PlsX	NA	NA	NA	NA	NA
WP_010930935.1|1504694_1505681_+	ketoacyl-ACP synthase III	NA	NA	NA	NA	NA
WP_010930934.1|1505762_1506698_+	ACP S-malonyltransferase	NA	NA	NA	NA	NA
WP_003813819.1|1506699_1507452_+	3-oxoacyl-ACP reductase FabG	NA	Q06VL0	Trichoplusia_ni_ascovirus	31.3	6.9e-12
WP_003813816.1|1507634_1507874_+	acyl carrier protein	NA	B2ZXV3	Ralstonia_phage	46.6	5.4e-11
WP_003813802.1|1508063_1509293_+	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA	NA
WP_010930933.1|1509294_1509795_+	membrane protein	NA	NA	NA	NA	NA
WP_003813797.1|1509791_1510391_+	RNA polymerase sigma factor RpoE	NA	A0A0F6TH34	Sinorhizobium_phage	26.1	2.2e-05
WP_023853242.1|1510403_1510904_+	sigma-E factor negative regulatory protein	NA	NA	NA	NA	NA
WP_010930931.1|1510903_1511962_+	siderophore-interacting protein	NA	NA	NA	NA	NA
WP_004566381.1|1511999_1513487_+|protease	DegQ family serine endoprotease	protease	W5SAB9	Pithovirus	31.5	1.2e-07
>prophage 14
NZ_CP013882	Bordetella pertussis strain H876 chromosome, complete genome	4105347	1743222	1791237	4105347	tRNA,transposase	Moraxella_phage(18.18%)	42	NA	NA
WP_010930522.1|1743222_1744173_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930804.1|1744271_1746872_-	TRAP transporter fused permease subunit	NA	NA	NA	NA	NA
WP_003818658.1|1746978_1747983_-	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010930803.1|1748091_1749432_-	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	22.8	8.8e-18
WP_003818661.1|1749472_1750501_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930802.1|1750696_1751242_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930801.1|1751238_1751799_+	diaminobutyrate acetyltransferase	NA	NA	NA	NA	NA
WP_010930048.1|1751897_1752848_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930523.1|1752885_1753473_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	35.8	4.7e-16
WP_003811007.1|1753490_1753874_-	thioredoxin family protein	NA	V9SJ74	Achromobacter_phage	25.8	8.1e-09
WP_003811011.1|1755233_1756526_-	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	36.0	1.7e-66
WP_010930524.1|1756660_1757701_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	51.3	6.1e-91
WP_010929632.1|1757798_1758815_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_023852762.1|1759082_1759718_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_010930526.1|1759855_1760614_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.2	1.4e-68
WP_019247478.1|1760598_1761378_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.9	4.8e-32
WP_003811022.1|1761395_1762280_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A292GJG6	Xanthomonas_phage	49.5	4.6e-15
WP_019248494.1|1762276_1763056_+	3'-5' exonuclease	NA	NA	NA	NA	NA
WP_003816527.1|1763082_1763760_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930529.1|1764048_1764801_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003816525.1|1764919_1766320_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	26.5	7.3e-31
WP_003816523.1|1766343_1766742_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003811035.1|1766917_1767118_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_010930530.1|1767256_1767985_+	redoxin family protein	NA	A0A1D8KSL1	Synechococcus_phage	56.8	9.6e-43
WP_003816520.1|1768118_1769534_+	dihydrolipoyl dehydrogenase	NA	NA	NA	NA	NA
WP_003816518.1|1769537_1770401_-	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
WP_004568486.1|1770413_1771163_-	glycerophosphodiester phosphodiesterase	NA	A0A2H4PGQ5	Escherichia_phage	27.8	1.5e-14
WP_010930531.1|1771405_1773361_+	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_019247882.1|1773342_1774011_-	arylesterase	NA	NA	NA	NA	NA
WP_005012067.1|1774785_1775736_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|1775834_1776785_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813572.1|1776933_1777272_-	BON domain-containing protein	NA	NA	NA	NA	NA
WP_003813570.1|1777329_1777491_-	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
WP_003813568.1|1777522_1777723_-	CsbD family protein	NA	NA	NA	NA	NA
WP_010930533.1|1777988_1780562_-	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_019247811.1|1780632_1783182_-	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_023852690.1|1785750_1786221_+	DUF1854 domain-containing protein	NA	NA	NA	NA	NA
WP_029443743.1|1786312_1787464_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_004566336.1|1787517_1788339_+	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_010930537.1|1788377_1789607_+	lytic murein transglycosylase	NA	NA	NA	NA	NA
WP_004566334.1|1789735_1790176_+	DUF937 domain-containing protein	NA	NA	NA	NA	NA
WP_005012808.1|1790286_1791237_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP013882	Bordetella pertussis strain H876 chromosome, complete genome	4105347	1852799	1912069	4105347	tRNA,protease,transposase	Klosneuvirus(40.0%)	51	NA	NA
WP_005013747.1|1852799_1853750_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930573.1|1853874_1854684_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010929577.1|1854884_1855835_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930574.1|1857108_1858326_+	four-carbon acid sugar kinase family protein	NA	NA	NA	NA	NA
WP_003818670.1|1859382_1860285_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930576.1|1860361_1861234_+	MOSC domain-containing protein	NA	NA	NA	NA	NA
WP_003818672.1|1861364_1861733_+	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
WP_010930577.1|1861790_1862837_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
WP_010930578.1|1863032_1864289_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_003810623.1|1864293_1865631_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_003818676.1|1865780_1866737_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247555.1|1866839_1867772_-	acyclic terpene utilization AtuA family protein	NA	NA	NA	NA	NA
WP_019247554.1|1867887_1868208_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033446181.1|1868194_1868560_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930581.1|1868607_1870182_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810637.1|1870234_1871179_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930582.1|1871196_1872027_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930583.1|1872019_1873654_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	8.2e-18
WP_010930584.1|1873650_1875006_+	amidase	NA	NA	NA	NA	NA
WP_010930585.1|1875912_1877490_+	lipoprotein	NA	NA	NA	NA	NA
WP_010930586.1|1877493_1878768_+	type 4b pilus protein PilO2	NA	NA	NA	NA	NA
WP_010930587.1|1878865_1879240_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930588.1|1880955_1882089_+	general secretion pathway protein	NA	NA	NA	NA	NA
WP_003810661.1|1882126_1882732_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_010930589.1|1882728_1883547_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930590.1|1883618_1886243_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
WP_004568544.1|1886229_1886484_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_010930591.1|1886550_1887132_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926757.1|1887435_1887696_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_014905757.1|1887861_1888485_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_003816734.1|1888484_1889258_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_010930593.1|1889254_1890463_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_010930594.1|1890488_1890962_-	RidA family protein	NA	NA	NA	NA	NA
WP_005012067.1|1891035_1891986_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879566.1|1892084_1893035_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930796.1|1893133_1894483_-	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_023852900.1|1895248_1896004_+	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_010930794.1|1896096_1898979_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
WP_003810689.1|1899301_1899727_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
WP_004568542.1|1899754_1900903_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_003810693.1|1900899_1901406_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_033446257.1|1901421_1902708_+	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_033446258.1|1902757_1904053_+|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930791.1|1904054_1904693_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_023852925.1|1904698_1905856_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_003810703.1|1905882_1907238_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_010930790.1|1907241_1908312_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810707.1|1908450_1908687_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930789.1|1908774_1909881_+	GTPase HflX	NA	NA	NA	NA	NA
WP_010930788.1|1909846_1911151_+|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930787.1|1911169_1912069_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
>prophage 16
NZ_CP013882	Bordetella pertussis strain H876 chromosome, complete genome	4105347	1922309	1979806	4105347	transposase	Staphylococcus_phage(16.67%)	56	NA	NA
WP_005013747.1|1922309_1923260_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|1923358_1924309_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930782.1|1924508_1925594_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_003810400.1|1925609_1926371_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930781.1|1926367_1927291_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.6	1.6e-23
WP_010930780.1|1927389_1927890_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930779.1|1927922_1928666_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_010930778.1|1928761_1929001_-	membrane protein	NA	NA	NA	NA	NA
WP_010930777.1|1929014_1929167_-	lipoprotein	NA	NA	NA	NA	NA
WP_010930776.1|1929252_1930743_-	cytochrome c oxidase accessory protein CcoG	NA	NA	NA	NA	NA
WP_010930775.1|1930834_1931773_-	cytochrome-c oxidase, cbb3-type subunit III	NA	NA	NA	NA	NA
WP_003818560.1|1931769_1931946_-	cytochrome oxidase	NA	NA	NA	NA	NA
WP_003810383.1|1931948_1932611_-	cytochrome-c oxidase, cbb3-type subunit II	NA	NA	NA	NA	NA
WP_003810379.1|1934232_1934376_-	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA	NA
WP_010930774.1|1934372_1935347_-	membrane protein	NA	NA	NA	NA	NA
WP_005012067.1|1935513_1936464_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930773.1|1936460_1937735_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_010930772.1|1937838_1939032_+	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930771.1|1939028_1939682_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930770.1|1939678_1941115_+	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930769.1|1941102_1941462_+	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_162268681.1|1942276_1942417_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930768.1|1943381_1945247_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930767.1|1945504_1947025_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_003816959.1|1947112_1947763_-	flavodoxin family protein	NA	NA	NA	NA	NA
WP_010930766.1|1948711_1950007_+	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_010930765.1|1950028_1950913_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930764.1|1951011_1951887_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_003816964.1|1951876_1952233_-	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
WP_010930763.1|1952363_1953338_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003812228.1|1953467_1953647_-	DUF3008 family protein	NA	NA	NA	NA	NA
WP_029443822.1|1953744_1954269_+	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_010930761.1|1954279_1955116_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816971.1|1955228_1955600_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930760.1|1955596_1956148_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_003816975.1|1956163_1957855_-	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
WP_003816977.1|1957903_1958584_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014905663.1|1958831_1959296_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930758.1|1959465_1960395_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_019247659.1|1960407_1961055_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023997035.1|1961128_1962946_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
WP_005012067.1|1963029_1963980_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|1964632_1965583_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812199.1|1965601_1965949_-	GFA family protein	NA	NA	NA	NA	NA
WP_010930755.1|1965977_1967417_-	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	37.4	7.4e-55
WP_010930754.1|1967435_1967831_-	VOC family protein	NA	NA	NA	NA	NA
WP_003812191.1|1968005_1968614_+	peptidase S16	NA	NA	NA	NA	NA
WP_010930753.1|1968626_1969445_+	hypothetical protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	28.8	2.3e-16
WP_010930752.1|1969396_1970371_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812183.1|1970399_1971461_-	XdhC family protein	NA	NA	NA	NA	NA
WP_010930751.1|1971457_1973674_-	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_010930750.1|1973687_1974146_-	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_003812179.1|1974303_1974648_-	exported protein	NA	NA	NA	NA	NA
WP_010930749.1|1974804_1975710_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930748.1|1975796_1976810_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_010930153.1|1978789_1979806_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 17
NZ_CP013882	Bordetella pertussis strain H876 chromosome, complete genome	4105347	1995356	2059725	4105347	transposase	Vibrio_phage(20.0%)	51	NA	NA
WP_005013747.1|1995356_1996307_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005015810.1|1996528_1997479_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852887.1|1997577_1998543_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930740.1|1998680_1999580_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930739.1|2002174_2003662_+	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_014486081.1|2003672_2004869_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_003816680.1|2004941_2006261_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010930737.1|2006257_2007133_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930736.1|2007163_2008312_-	CoA transferase	NA	NA	NA	NA	NA
WP_010930735.1|2008329_2008644_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_003816687.1|2008665_2009388_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003816690.1|2009387_2010206_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003816691.1|2010210_2010738_-	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_010930733.1|2010743_2012000_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_010930732.1|2012358_2013498_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930731.1|2013575_2014448_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930730.1|2015318_2016269_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930729.1|2016228_2016864_-	membrane protein	NA	NA	NA	NA	NA
WP_010930728.1|2017223_2018546_-	isocitrate lyase	NA	NA	NA	NA	NA
WP_010930727.1|2018864_2019686_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	4.1e-42
WP_003810356.1|2021110_2021683_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930726.1|2021722_2023552_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_010930725.1|2023514_2024573_-	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_010930724.1|2024610_2025072_-	holo-ACP synthase	NA	NA	NA	NA	NA
WP_003810344.1|2025156_2025903_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_019247651.1|2027393_2030624_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_019248531.1|2030690_2032022_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_010930721.1|2032274_2032649_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930720.1|2032751_2033930_-	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_003810329.1|2033940_2034531_-	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_003818535.1|2034641_2035448_+	TOBE domain-containing protein	NA	NA	NA	NA	NA
WP_010930719.1|2035473_2036268_-	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.7	5.1e-05
WP_010930718.1|2037268_2038243_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003818533.1|2038401_2038914_-	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	52.3	1.8e-43
WP_003818532.1|2039070_2040042_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_023853104.1|2041786_2042581_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010930716.1|2042589_2043891_-	malonyl-CoA decarboxylase	NA	NA	NA	NA	NA
WP_010930715.1|2043841_2044606_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930714.1|2044719_2045490_-	spermidine synthase	NA	NA	NA	NA	NA
WP_010930713.1|2045574_2046762_-	acetyl-CoA C-acyltransferase family protein	NA	NA	NA	NA	NA
WP_003818524.1|2046834_2047209_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
WP_003810308.1|2047309_2048572_-	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.8e-28
WP_003810306.1|2048568_2049426_-	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA	NA
WP_003818523.1|2049598_2050600_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|2051051_2052002_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446265.1|2053565_2054717_+	multidrug effflux MFS transporter	NA	NA	NA	NA	NA
WP_003810297.1|2055085_2055322_+	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_010930711.1|2055385_2055553_+	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_023853105.1|2055666_2057562_-	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.5	2.3e-19
WP_062826579.1|2057725_2058676_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931070.1|2058774_2059725_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
NZ_CP013882	Bordetella pertussis strain H876 chromosome, complete genome	4105347	2246192	2307540	4105347	tRNA,transposase	Yellowstone_lake_phycodnavirus(12.5%)	52	NA	NA
WP_005013747.1|2246192_2247143_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811701.1|2247259_2247979_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930605.1|2248151_2249138_+	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010930604.1|2249138_2249621_+	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_003811706.1|2249624_2250908_+	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_003811709.1|2250904_2251843_+	citrate lyase subunit beta	NA	NA	NA	NA	NA
WP_010930603.1|2251839_2253549_+	thiamine pyrophosphate-binding protein	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	27.3	5.9e-35
WP_010930602.1|2253558_2254806_+	Zn-dependent hydrolase	NA	NA	NA	NA	NA
WP_003811716.1|2256416_2257706_-	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA	NA
WP_020699606.1|2258843_2259602_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.9	6.7e-31
WP_010930601.1|2260278_2261022_-	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930600.1|2261096_2261837_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930599.1|2262032_2262869_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_010930598.1|2262919_2263690_-	TatD family hydrolase	NA	NA	NA	NA	NA
WP_010930597.1|2263739_2264792_-	DNA polymerase III subunit delta'	NA	NA	NA	NA	NA
WP_003811733.1|2264788_2265415_-	dTMP kinase	NA	A0A1L2BX49	Bacteriophage	35.1	1.6e-22
WP_010930596.1|2265411_2266446_-	endolytic transglycosylase MltG	NA	NA	NA	NA	NA
WP_010930595.1|2266624_2267641_+	folate-binding protein YgfZ	NA	NA	NA	NA	NA
WP_005012067.1|2267739_2268690_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930797.1|2271430_2272720_-	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_010930798.1|2272838_2273276_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930799.1|2273319_2274528_-	NO-inducible flavohemoprotein	NA	NA	NA	NA	NA
WP_003810867.1|2274674_2275139_+	GatB/YqeY domain-containing protein	NA	A0A0K2FLI9	Brevibacillus_phage	32.4	3.9e-05
WP_014905945.1|2275162_2276113_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930521.1|2277097_2277871_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930520.1|2277867_2278866_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930519.1|2278950_2279727_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.2	1.2e-30
WP_010930518.1|2279882_2281487_-	ABC-F family ATPase	NA	A0A1V0SKJ1	Klosneuvirus	28.9	1.2e-53
WP_003816541.1|2281867_2282992_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810992.1|2283118_2283742_+	TRAP transporter small permease subunit	NA	NA	NA	NA	NA
WP_010930517.1|2283738_2285640_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_010930516.1|2285688_2286483_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010930515.1|2286495_2287497_-	muramoyltetrapeptide carboxypeptidase	NA	NA	NA	NA	NA
WP_010930514.1|2287493_2287943_-|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	S4VYT2	Pandoravirus	38.2	2.0e-06
WP_010930513.1|2287992_2288841_-	hydrolase	NA	NA	NA	NA	NA
WP_019247780.1|2288938_2289481_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2289524_2290475_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930511.1|2290630_2290957_-	cation:proton antiporter	NA	NA	NA	NA	NA
WP_033446177.1|2290953_2291235_-	K+/H+ antiporter subunit F	NA	NA	NA	NA	NA
WP_023852885.1|2291234_2291711_-	Na+/H+ antiporter subunit E	NA	NA	NA	NA	NA
WP_004568496.1|2291710_2293339_-	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA	NA
WP_003810969.1|2293335_2293680_-	Na+/H+ antiporter subunit C	NA	NA	NA	NA	NA
WP_010930509.1|2293679_2296613_-	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA	NA
WP_010929588.1|2297771_2298722_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811452.1|2298820_2299117_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930508.1|2299223_2300141_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930507.1|2300145_2300859_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930506.1|2300872_2301844_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930505.1|2303593_2303944_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930504.1|2303947_2305135_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930503.1|2305573_2306296_+	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_005013747.1|2306589_2307540_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
NZ_CP013882	Bordetella pertussis strain H876 chromosome, complete genome	4105347	2328331	2399485	4105347	transposase	Tetraselmis_virus(10.0%)	55	NA	NA
WP_005012067.1|2328331_2329282_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852967.1|2329834_2331460_-	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_010930475.1|2331509_2332544_-	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_010930476.1|2332546_2333893_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930477.1|2333889_2335404_-	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|2335394_2336405_-	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930479.1|2336878_2337820_-	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930480.1|2337828_2338797_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930481.1|2340336_2341305_+	transporter	NA	NA	NA	NA	NA
WP_010930482.1|2341482_2342472_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010926609.1|2342518_2343277_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930483.1|2343466_2344204_+	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_005012808.1|2344302_2345253_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816696.1|2345437_2346220_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_003810743.1|2346213_2346915_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003810741.1|2347154_2347757_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|2349083_2350034_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486074.1|2350030_2351587_-	LTA synthase family protein	NA	NA	NA	NA	NA
WP_010930486.1|2351579_2352353_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_005013747.1|2352411_2353362_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852812.1|2353443_2354619_-	capsular biosynthesis protein	NA	NA	NA	NA	NA
WP_010930473.1|2354632_2356690_-	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_010930472.1|2356686_2357712_-	Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC	NA	A0A2K9L4U8	Tupanvirus	44.2	4.7e-72
WP_010930471.1|2357723_2359013_-	Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB	NA	NA	NA	NA	NA
WP_010930470.1|2359035_2360133_-	capsular polysaccharide export protein	NA	NA	NA	NA	NA
WP_003811224.1|2360129_2361020_-	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_010930469.1|2361016_2363101_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_010930468.1|2363132_2364302_-	capsule polysaccharide transporter	NA	NA	NA	NA	NA
WP_014486073.1|2364343_2365084_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_010930466.1|2365083_2365854_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_019247171.1|2366178_2366346_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930465.1|2366709_2367495_+	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	32.0	1.1e-12
WP_010930464.1|2367521_2369606_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247170.1|2369773_2371729_+	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_003811209.1|2372052_2372553_-	DNA starvation/stationary phase protection protein	NA	W5S6G8	Pithovirus	35.5	6.4e-14
WP_010930461.1|2372651_2374178_-	CoA-acylating methylmalonate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930460.1|2374315_2375203_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811203.1|2375217_2376171_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	26.5	7.2e-14
WP_033446218.1|2376222_2378313_-	ATP-dependent DNA helicase RecG	NA	NA	NA	NA	NA
WP_010930458.1|2378328_2378715_-	reactive intermediate/imine deaminase	NA	NA	NA	NA	NA
WP_010930457.1|2381408_2382212_-	2,5-didehydrogluconate reductase DkgB	NA	A0A2H4PQR8	Staphylococcus_phage	32.4	2.0e-33
WP_010930456.1|2383505_2384408_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811187.1|2384472_2385249_-	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
WP_010930455.1|2385570_2386620_+	Fe(3+) ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930454.1|2386743_2388414_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_019248220.1|2388418_2389213_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.4	8.3e-16
WP_005012067.1|2389311_2390262_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930453.1|2390281_2391187_-	pirin family protein	NA	NA	NA	NA	NA
WP_003811176.1|2391264_2391963_-	pirin family protein	NA	NA	NA	NA	NA
WP_010930452.1|2392122_2393067_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930451.1|2393076_2394564_-	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
WP_003811167.1|2394563_2395631_-	PAS domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
WP_003811164.1|2395694_2397107_-	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_010930450.1|2397292_2398513_-	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
WP_005012808.1|2398534_2399485_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NZ_CP013882	Bordetella pertussis strain H876 chromosome, complete genome	4105347	2496362	2555143	4105347	tRNA,transposase	Planktothrix_phage(28.57%)	50	NA	NA
WP_003812608.1|2496362_2498312_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.0	4.1e-125
WP_019248759.1|2498699_2499476_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003812612.1|2499481_2499874_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2500295_2501246_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930389.1|2501242_2502340_-	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	37.3	3.5e-20
WP_076879548.1|2502371_2503322_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814009.1|2505103_2506345_-	MFS transporter	NA	NA	NA	NA	NA
WP_003814010.1|2506356_2507130_-	peroxide stress protein YaaA	NA	NA	NA	NA	NA
WP_005012067.1|2507156_2508107_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930388.1|2508586_2509243_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA	NA
WP_010930387.1|2509257_2510925_-	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_010930386.1|2510927_2511557_-	TRAP transporter small permease subunit	NA	NA	NA	NA	NA
WP_014486072.1|2511768_2512863_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930384.1|2513007_2513820_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_010930383.1|2513823_2515407_-	membrane protein	NA	NA	NA	NA	NA
WP_010930382.1|2515577_2516708_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930381.1|2516894_2517971_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_010930380.1|2518052_2518703_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_010930379.1|2518717_2520121_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
WP_004567445.1|2520404_2521223_-	solute-binding protein	NA	NA	NA	NA	NA
WP_010930378.1|2521219_2521924_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.0	2.6e-13
WP_010930377.1|2522823_2523939_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_004567447.1|2523972_2524347_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930376.1|2524369_2525527_-	formate dehydrogenase subunit gamma	NA	NA	NA	NA	NA
WP_003812666.1|2525539_2525773_-	lipoprotein	NA	NA	NA	NA	NA
WP_019247523.1|2526407_2529377_-	formate dehydrogenase subunit alpha	NA	NA	NA	NA	NA
WP_023853518.1|2529391_2529601_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248667.1|2529752_2530382_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023994978.1|2530378_2532436_-	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_010930372.1|2532492_2533173_-	DUF3306 domain-containing protein	NA	NA	NA	NA	NA
WP_003820494.1|2533169_2533730_-	DUF3305 domain-containing protein	NA	NA	NA	NA	NA
WP_004567450.1|2533736_2534834_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010930371.1|2534986_2535580_+	molybdenum cofactor guanylyltransferase MobA	NA	NA	NA	NA	NA
WP_010930370.1|2535576_2536869_+	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_003812685.1|2536882_2537425_+	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA	NA
WP_010930369.1|2537434_2538271_-	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003820487.1|2538304_2539366_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	42.8	2.9e-80
WP_019247210.1|2539407_2540460_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_019247209.1|2540475_2540778_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|2540919_2541870_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268680.1|2541887_2542052_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930368.1|2542048_2543743_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003809599.1|2543739_2544825_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	6.4e-27
WP_010930367.1|2544872_2545772_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003809593.1|2545782_2546427_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_010930366.1|2547448_2550691_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_023852833.1|2550701_2551856_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.4	3.3e-53
WP_010930364.1|2552082_2553045_+	transaldolase	NA	H6WFR1	Cyanophage	29.2	7.5e-11
WP_076879624.1|2553143_2554094_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930363.1|2554192_2555143_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
NZ_CP013882	Bordetella pertussis strain H876 chromosome, complete genome	4105347	2607680	2674180	4105347	transposase	uncultured_Caudovirales_phage(40.0%)	56	NA	NA
WP_005012067.1|2607680_2608631_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811850.1|2609000_2609573_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA	NA
WP_003811852.1|2609575_2610586_+	flagellar motor switch protein FliM	NA	NA	NA	NA	NA
WP_010930335.1|2610578_2611079_+	flagellar motor switch protein FliN	NA	NA	NA	NA	NA
WP_003811855.1|2611089_2611431_+	flagellar biosynthetic protein FliO	NA	NA	NA	NA	NA
WP_010930334.1|2611499_2612234_+	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA	NA
WP_003811859.1|2612250_2612520_+	flagellar biosynthesis protein FliQ	NA	NA	NA	NA	NA
WP_010930333.1|2612542_2613331_+	flagellar biosynthetic protein FliR	NA	NA	NA	NA	NA
WP_010931363.1|2613377_2614394_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_014486070.1|2614610_2616053_-	PAS domain-containing protein	NA	A0A1B0V854	Salmonella_phage	41.8	1.0e-35
WP_010930332.1|2616231_2617851_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	45.3	1.5e-08
WP_010930331.1|2617971_2619792_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	52.6	6.4e-11
WP_010930330.1|2619870_2621403_-	flagellar hook-associated protein 3	NA	NA	NA	NA	NA
WP_010930329.1|2621436_2623083_-	flagellar hook-associated protein FlgK	NA	NA	NA	NA	NA
WP_010930328.1|2623152_2624175_-	flagellar assembly peptidoglycan hydrolase FlgJ	NA	A0A088F6W1	Sulfitobacter_phage	31.4	1.9e-12
WP_010930327.1|2624192_2625326_-	flagellar basal body P-ring protein FlgI	NA	NA	NA	NA	NA
WP_010930326.1|2625328_2626018_-	flagellar basal body L-ring protein FlgH	NA	NA	NA	NA	NA
WP_010930325.1|2626017_2626803_-	flagellar basal-body rod protein FlgG	NA	NA	NA	NA	NA
WP_003817181.1|2626846_2627611_-	flagellar basal body rod protein FlgF	NA	NA	NA	NA	NA
WP_003817180.1|2627649_2629071_-	flagellar hook-basal body complex protein	NA	NA	NA	NA	NA
WP_010930324.1|2629136_2629841_-	flagellar basal body rod modification protein FlgD	NA	NA	NA	NA	NA
WP_003817176.1|2629888_2630308_-	flagellar basal body rod protein FlgC	NA	NA	NA	NA	NA
WP_010930323.1|2630320_2630728_-	flagellar basal body rod protein FlgB	NA	NA	NA	NA	NA
WP_010930322.1|2630911_2631622_+	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA	NA
WP_003817172.1|2631748_2632039_+	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA	NA
WP_003817170.1|2632056_2632539_+	flagellar protein FlgN	NA	NA	NA	NA	NA
WP_010930321.1|2637044_2638199_-	flagellar type III secretion system protein FlhB	NA	NA	NA	NA	NA
WP_010931363.1|2638504_2639521_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930319.1|2639767_2640556_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003812020.1|2640622_2641303_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812022.1|2641299_2642070_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.1	9.8e-30
WP_010930208.1|2642168_2643119_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811401.1|2643174_2644092_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
WP_003811400.1|2644102_2645281_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	NA	NA	NA	NA
WP_010930318.1|2645300_2646296_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811396.1|2647884_2648493_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_003811393.1|2648480_2649521_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811391.1|2649538_2650501_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811389.1|2650497_2651691_-	CoA transferase	NA	NA	NA	NA	NA
WP_010930317.1|2651687_2652485_-	citryl-CoA lyase	NA	NA	NA	NA	NA
WP_014486069.1|2652510_2653497_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930316.1|2653515_2655555_-	acetyl-CoA synthetase	NA	NA	NA	NA	NA
WP_010930315.1|2655756_2656437_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930314.1|2656450_2657362_-	CoA ester lyase	NA	NA	NA	NA	NA
WP_003811381.1|2657358_2657937_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930313.1|2658075_2658981_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930312.1|2658988_2662408_+	TM0106 family RecB-like putative nuclease	NA	NA	NA	NA	NA
WP_010930311.1|2662395_2664996_-	BP1344/BB2830 family autotransporter	NA	NA	NA	NA	NA
WP_003811375.1|2665951_2666584_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003811372.1|2666977_2667736_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003811370.1|2667732_2668935_+	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010930208.1|2669122_2670073_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930310.1|2670980_2672126_+	DUF3182 family protein	NA	NA	NA	NA	NA
WP_019247449.1|2672112_2672868_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_003811361.1|2672984_2673164_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930208.1|2673229_2674180_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
NZ_CP013882	Bordetella pertussis strain H876 chromosome, complete genome	4105347	2836745	2902330	4105347	tRNA,transposase	Oenococcus_phage(33.33%)	52	NA	NA
WP_023853639.1|2836745_2837696_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879566.1|2837794_2838745_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930231.1|2838947_2839937_+	succinylglutamate desuccinylase	NA	NA	NA	NA	NA
WP_010930230.1|2840020_2840374_+	NirD/YgiW/YdeI family stress tolerance protein	NA	NA	NA	NA	NA
WP_010930229.1|2840451_2841060_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811662.1|2842733_2843312_-	amino acid synthesis family protein	NA	NA	NA	NA	NA
WP_003811660.1|2843336_2844290_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930228.1|2844329_2845247_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_033446252.1|2845368_2846295_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930226.1|2846302_2847049_-	aldolase	NA	NA	NA	NA	NA
WP_010930225.1|2847375_2848317_+	LD-carboxypeptidase	NA	NA	NA	NA	NA
WP_010930224.1|2848543_2850241_-	sodium:solute symporter family protein	NA	NA	NA	NA	NA
WP_010930223.1|2850675_2852097_-	MFS transporter	NA	NA	NA	NA	NA
WP_010930222.1|2852250_2853030_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019247966.1|2853154_2854033_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930220.1|2854138_2855263_+	mandelate racemase/muconate lactonizing enzyme family protein	NA	Q6A202	Oenococcus_phage	28.3	1.5e-31
WP_003811636.1|2855308_2856271_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930219.1|2856263_2857118_+	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_003811632.1|2857225_2857636_+	VOC family protein	NA	NA	NA	NA	NA
WP_010929956.1|2857632_2858583_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813574.1|2858681_2859563_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_003821443.1|2859640_2861020_-	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_010930218.1|2861058_2861904_-	membrane protein	NA	NA	NA	NA	NA
WP_033451623.1|2861919_2862234_-	cupredoxin domain-containing protein	NA	NA	NA	NA	NA
WP_010930217.1|2862266_2862803_-	membrane protein	NA	NA	NA	NA	NA
WP_003813585.1|2862975_2863551_-	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA	NA
WP_003813586.1|2863653_2864391_-	acetoacetyl-CoA reductase	NA	NA	NA	NA	NA
WP_010930216.1|2864458_2866096_-	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA	NA
WP_019247742.1|2866203_2866959_-	peptidoglycan editing factor PgeF	NA	NA	NA	NA	NA
WP_010930214.1|2866946_2867909_-	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_033446255.1|2868016_2868811_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_010930213.1|2868872_2870948_-	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	30.0	2.4e-75
WP_010930212.1|2871112_2873488_+	RNA-binding transcriptional accessory protein	NA	NA	NA	NA	NA
WP_010930211.1|2873568_2874924_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003813618.1|2876402_2877125_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930207.1|2877179_2878163_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|2878292_2879243_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813621.1|2879239_2880142_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930206.1|2880229_2880988_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_023853245.1|2881000_2882092_-	cell division protein ZapE	NA	NA	NA	NA	NA
WP_003813626.1|2882189_2883617_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	2.1e-41
WP_010930204.1|2883846_2885061_-	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_003813631.1|2885106_2887977_-	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_010930202.1|2890387_2890876_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930201.1|2891001_2893698_+	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA	NA
WP_010930200.1|2893852_2896135_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_010930199.1|2896300_2896933_+	fimbrial protein	NA	NA	NA	NA	NA
WP_010930198.1|2897031_2897982_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812405.1|2898028_2898583_-	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_003816844.1|2898650_2899496_-	PHP domain-containing protein	NA	NA	NA	NA	NA
WP_019248398.1|2899565_2900534_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_023853221.1|2900533_2902330_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NZ_CP013882	Bordetella pertussis strain H876 chromosome, complete genome	4105347	2919900	2979794	4105347	tRNA,transposase,holin	Catovirus(22.22%)	51	NA	NA
WP_010930190.1|2919900_2921421_+|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
WP_010930189.1|2921463_2921766_+	membrane protein	NA	NA	NA	NA	NA
WP_003812436.1|2921762_2922395_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930188.1|2922473_2924339_-	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
WP_020699602.1|2924335_2925130_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.3	1.2e-11
WP_010930186.1|2925158_2926274_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930185.1|2927178_2928057_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930184.1|2928056_2928881_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
WP_005012067.1|2929048_2929999_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930183.1|2930211_2933061_+	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010930182.1|2933042_2933771_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_019248549.1|2933911_2935375_-	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
WP_010930180.1|2935371_2935743_-	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
WP_003812701.1|2935760_2937074_+	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_003812703.1|2937110_2937569_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|2937681_2938632_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930178.1|2938628_2939642_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_003812707.1|2939781_2940768_+	homoserine kinase	NA	NA	NA	NA	NA
WP_161633091.1|2941126_2941834_-	DUF192 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|2942414_2943365_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809618.1|2943516_2944119_-	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_010930175.1|2944137_2944770_+	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
WP_162096758.1|2944814_2945066_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930174.1|2945007_2946894_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
WP_010930173.1|2946912_2947755_+	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
WP_003819875.1|2947751_2949110_+	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_003809629.1|2949330_2950125_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930172.1|2950355_2951849_-	exopolyphosphatase	NA	NA	NA	NA	NA
WP_010930171.1|2952084_2954166_+	polyphosphate kinase 1	NA	NA	NA	NA	NA
WP_014486066.1|2954360_2955401_+	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
WP_010930169.1|2955535_2956552_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_003809638.1|2956573_2957431_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_010930167.1|2957475_2958252_+	phosphate ABC transporter ATP-binding protein PstB	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
WP_154698393.1|2958464_2958602_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2958619_2959570_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809441.1|2959596_2960061_-	barstar family protein	NA	NA	NA	NA	NA
WP_014486065.1|2961267_2963556_-	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_010930165.1|2963672_2964545_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930164.1|2964587_2965742_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_010930163.1|2965776_2966607_-	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_023853525.1|2966690_2968235_+	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
WP_010930161.1|2968277_2968637_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003819794.1|2968638_2969052_-|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_003809432.1|2969092_2969410_-	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003809431.1|2969494_2970211_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930160.1|2970474_2971896_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_019248433.1|2971962_2974710_-	pertactin autotransporter	NA	NA	NA	NA	NA
WP_023853536.1|2975042_2976059_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930157.1|2976394_2977036_-	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_003809423.1|2977126_2978563_-	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_023853534.1|2978720_2979794_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
>prophage 24
NZ_CP013882	Bordetella pertussis strain H876 chromosome, complete genome	4105347	2984680	3057197	4105347	tRNA,transposase	Pseudomonas_phage(14.29%)	60	NA	NA
WP_010929632.1|2984680_2985697_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_015041211.1|2986634_2988062_+|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010930151.1|2988058_2989081_+	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
WP_003809396.1|2989070_2989544_+	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_010930149.1|2989684_2990572_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_014486064.1|2990568_2992212_+	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_003819773.1|2992208_2993216_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_010931363.1|2994046_2995063_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003817162.1|2995162_2995795_-	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_003811911.1|2995803_2996193_-	chemotaxis protein CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
WP_010930146.1|2996245_2997298_-	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_010930145.1|2998161_2999868_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
WP_003811919.1|2999941_3000442_-	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_010930144.1|3000456_3002514_-	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_019247393.1|3002540_3002834_-	response regulator	NA	NA	NA	NA	NA
WP_003817154.1|3002935_3003883_-	flagellar motor protein MotB	NA	NA	NA	NA	NA
WP_003811927.1|3003895_3004771_-	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
WP_003811929.1|3004891_3005452_-	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
WP_010930143.1|3005486_3005810_-	flagellar transcriptional regulator FlhD	NA	NA	NA	NA	NA
WP_003811933.1|3006245_3006983_+	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
WP_005012067.1|3007281_3008232_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809486.1|3008475_3008739_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_003819817.1|3008812_3009094_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930142.1|3009110_3009971_-	M23 family metallopeptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
WP_003809479.1|3009967_3010303_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930141.1|3010356_3011007_-	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
WP_019247197.1|3012687_3013632_-	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_003809467.1|3013677_3013995_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930139.1|3013997_3014936_-	DnaJ domain-containing protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
WP_003819814.1|3015113_3015599_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930138.1|3015617_3016166_+	diguanylate cyclase	NA	NA	NA	NA	NA
WP_023994624.1|3016197_3016350_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930137.1|3017679_3018321_+	glutathione transferase	NA	NA	NA	NA	NA
WP_010930136.1|3018475_3020824_+	DUF3141 domain-containing protein	NA	NA	NA	NA	NA
WP_003809454.1|3020820_3021759_+	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_010930135.1|3021784_3022975_+	acetate kinase	NA	NA	NA	NA	NA
WP_010930134.1|3022971_3023745_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010930133.1|3023774_3024968_-	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_010930132.1|3025085_3026096_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_010930131.1|3026113_3028150_-	transketolase	NA	NA	NA	NA	NA
WP_010930130.1|3028344_3029085_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_010929584.1|3029183_3030134_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003817151.1|3030176_3031352_+	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_010930129.1|3031573_3033364_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
WP_010930128.1|3033376_3035038_-	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
WP_010930127.1|3035050_3037756_-	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_003817147.1|3038048_3039803_+	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_010930126.1|3039799_3040426_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003811948.1|3040422_3041274_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
WP_010930125.1|3041403_3043464_+	M3 family metallopeptidase	NA	NA	NA	NA	NA
WP_010930124.1|3043650_3044265_+	SCO family protein	NA	NA	NA	NA	NA
WP_010930123.1|3044410_3044662_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_014486063.1|3044731_3046114_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010930121.1|3046110_3049290_-	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_029443805.1|3050097_3051015_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930119.1|3051066_3051798_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_010926548.1|3051857_3052430_+	chorismate lyase	NA	NA	NA	NA	NA
WP_010929632.1|3053938_3054955_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930118.1|3055092_3056142_-	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
WP_005012067.1|3056246_3057197_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 25
NZ_CP013882	Bordetella pertussis strain H876 chromosome, complete genome	4105347	3076597	3141537	4105347	transposase	Bacillus_phage(18.18%)	59	NA	NA
WP_005012067.1|3076597_3077548_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446303.1|3077646_3078231_-	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003821513.1|3078265_3079255_-	ADP-glyceromanno-heptose 6-epimerase	NA	E3SJ87	Synechococcus_phage	34.4	2.2e-26
WP_010930105.1|3079251_3080193_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A2H4N7X4	Lake_Baikal_phage	28.1	1.5e-16
WP_010930104.1|3080189_3081410_-	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
WP_010930103.1|3081452_3081767_-	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
WP_010930102.1|3081958_3082318_-	integration host factor subunit beta	NA	NA	NA	NA	NA
WP_010930101.1|3082319_3084035_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_010930100.1|3084222_3084894_-	(d)CMP kinase	NA	NA	NA	NA	NA
WP_010930099.1|3084908_3086237_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_010930098.1|3086233_3087133_-	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010930097.1|3087219_3088305_-	prephenate dehydratase	NA	NA	NA	NA	NA
WP_023852687.1|3088297_3089428_-	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	44.0	4.9e-78
WP_010930095.1|3089430_3092112_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	3.2e-104
WP_010930094.1|3092482_3093064_+	OmpA family protein	NA	NA	NA	NA	NA
WP_010930093.1|3093189_3093915_+	bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase	NA	NA	NA	NA	NA
WP_010930092.1|3093911_3094589_+	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_010930091.1|3094804_3095986_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930090.1|3096758_3096941_+	type II toxin-antitoxin system HicA family toxin	NA	A0A1L2JY37	Aeribacillus_phage	56.1	3.7e-12
WP_005012808.1|3096970_3097921_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566317.1|3098050_3098443_+	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
WP_003821497.1|3098719_3099631_-	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
WP_010930088.1|3099755_3100730_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|3100726_3101677_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810865.1|3101775_3102861_-	DNA polymerase IV	NA	NA	NA	NA	NA
WP_010930072.1|3102958_3103369_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003810859.1|3103984_3105898_+	S9 family peptidase	NA	NA	NA	NA	NA
WP_010930071.1|3106033_3108646_+	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_019248496.1|3108647_3109382_-	serine/threonine protein phosphatase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
WP_003810851.1|3109545_3110727_+	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_003810850.1|3110723_3110936_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930069.1|3110932_3111913_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_010930068.1|3111958_3112786_-	oxidoreductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
WP_023852913.1|3112935_3114750_+	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
WP_003810840.1|3114804_3115188_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_010930066.1|3115184_3116135_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810839.1|3116247_3116499_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810837.1|3116692_3116908_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|3117004_3118123_-	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810832.1|3118242_3118455_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930064.1|3118614_3118836_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|3118888_3119839_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930062.1|3121015_3122386_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_010930061.1|3122418_3123210_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930060.1|3123222_3124278_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019247557.1|3124303_3125179_-	amidohydrolase	NA	NA	NA	NA	NA
WP_023852826.1|3125284_3125533_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003819989.1|3125567_3127022_-	carboxylase	NA	NA	NA	NA	NA
WP_004568140.1|3127018_3127540_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_010930057.1|3127568_3128921_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_029444137.1|3129144_3132033_-	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010930056.1|3134177_3135479_+	phospholipase	NA	NA	NA	NA	NA
WP_010930055.1|3135493_3136210_-	flagellar brake protein	NA	NA	NA	NA	NA
WP_010930054.1|3136491_3137172_+	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_003809770.1|3137183_3137351_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023852837.1|3137459_3137606_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930052.1|3137699_3138359_-	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
WP_010930051.1|3138757_3140590_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
WP_005012067.1|3140586_3141537_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
NZ_CP013882	Bordetella pertussis strain H876 chromosome, complete genome	4105347	3233160	3302163	4105347	transposase	Klosneuvirus(16.67%)	55	NA	NA
WP_041337087.1|3233160_3234111_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813068.1|3234107_3235127_-	class 1 fructose-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	35.7	1.5e-49
WP_010930049.1|3235136_3237845_-	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	24.0	2.8e-15
WP_010930050.1|3237992_3238649_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|3238747_3239698_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023998705.1|3239845_3240739_+	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_010930013.1|3240938_3242633_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_010930012.1|3242667_3243594_+	VOC family protein	NA	NA	NA	NA	NA
WP_010930011.1|3243662_3244760_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003818996.1|3244778_3245642_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.9	9.6e-34
WP_010930010.1|3245653_3246436_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_004566042.1|3246432_3247551_+	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
WP_010930009.1|3247547_3249080_+	acyl--CoA ligase	NA	NA	NA	NA	NA
WP_003818991.1|3249120_3250128_+	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_023999677.1|3250272_3250995_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930007.1|3251010_3252033_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_010930006.1|3252349_3253084_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930005.1|3253168_3254914_+	acetolactate synthase	NA	NA	NA	NA	NA
WP_010930004.1|3254910_3255663_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930003.1|3255707_3256664_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003818983.1|3256752_3257319_+	membrane protein	NA	NA	NA	NA	NA
WP_010930002.1|3257326_3258187_-	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_020699739.1|3258216_3258945_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.4	3.4e-32
WP_003807497.1|3258976_3259660_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010930000.1|3260497_3261412_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929999.1|3261476_3262385_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929998.1|3262475_3263900_-	TolC family protein	NA	NA	NA	NA	NA
WP_010929997.1|3263901_3265224_-	cyclolysin T1SS periplasmic adaptor subunit CyaD	NA	NA	NA	NA	NA
WP_010929996.1|3265220_3267359_-	cyclolysin T1SS permease/ATPase CyaB	NA	W8CYL7	Bacillus_phage	29.2	2.7e-45
WP_010929995.1|3267436_3272557_-	bifunctional adenylate cyclase toxin/hemolysin CyaA	NA	NA	NA	NA	NA
WP_153302771.1|3272657_3272966_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929994.1|3273035_3273593_+	cyclolysin-activating lysine-acyltransferase	NA	NA	NA	NA	NA
WP_010929993.1|3273608_3275090_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_023853308.1|3275144_3276998_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929992.1|3277260_3278598_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_010929991.1|3278632_3280630_-	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010929990.1|3280647_3282696_-	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010929989.1|3282826_3283693_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929988.1|3283961_3284927_-	octaprenyl diphosphate synthase	NA	NA	NA	NA	NA
WP_010929987.1|3285041_3286190_-	fumarylacetoacetate hydrolase	NA	NA	NA	NA	NA
WP_003807462.1|3286614_3286926_+	50S ribosomal protein L21	NA	NA	NA	NA	NA
WP_003807460.1|3286959_3287220_+	50S ribosomal protein L27	NA	NA	NA	NA	NA
WP_003807459.1|3287369_3288503_+	GTPase ObgE	NA	NA	NA	NA	NA
WP_003807457.1|3288573_3289710_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	44.8	5.8e-63
WP_010925762.1|3289875_3290670_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003807452.1|3290732_3291176_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|3291291_3292242_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929985.1|3292343_3292772_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929984.1|3292844_3295040_+	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|3295261_3296212_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852739.1|3296171_3296696_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_003814467.1|3296827_3297799_+	FecR family protein	NA	NA	NA	NA	NA
WP_010929983.1|3297918_3300363_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_010929982.1|3300378_3300969_-	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|3301212_3302163_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 27
NZ_CP013882	Bordetella pertussis strain H876 chromosome, complete genome	4105347	3317609	3417722	4105347	protease,tail,tRNA,transposase,terminase	uncultured_Caudovirales_phage(14.29%)	107	NA	NA
WP_005012067.1|3317609_3318560_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814437.1|3319291_3319669_+	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_003814436.1|3319653_3320355_-	membrane protein	NA	NA	NA	NA	NA
WP_010931409.1|3320498_3321191_-	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_164674269.1|3321190_3322231_-	phosphotransferase	NA	NA	NA	NA	NA
WP_033446130.1|3322409_3324776_+	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931412.1|3324772_3326332_+	chaperone SurA	NA	NA	NA	NA	NA
WP_010931413.1|3326356_3327154_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931414.1|3327185_3328331_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_003814419.1|3328435_3329878_+	pyruvate kinase	NA	NA	NA	NA	NA
WP_010929184.1|3329880_3331110_-	spore maturation protein	NA	NA	NA	NA	NA
WP_005012808.1|3333247_3334198_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247922.1|3335327_3335885_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247923.1|3335860_3336211_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814657.1|3336379_3337174_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
WP_010931416.1|3337170_3338220_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003814652.1|3338219_3338909_-	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_003814650.1|3338995_3339493_-	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_010931417.1|3339524_3340841_-	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_010931418.1|3340857_3341832_-	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_003814643.1|3341868_3342327_-	protein TolR	NA	NA	NA	NA	NA
WP_003814641.1|3342326_3343007_-	protein TolQ	NA	NA	NA	NA	NA
WP_010931419.1|3343009_3343438_-	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814636.1|3343490_3345221_-|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
WP_003814635.1|3345286_3345859_+	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_010931420.1|3345839_3346526_+	response regulator	NA	NA	NA	NA	NA
WP_010931421.1|3346881_3347553_+	SOS response-associated peptidase	NA	Q5QF62	Pseudomonas_virus	39.9	4.7e-36
WP_010931422.1|3347881_3348103_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010926433.1|3348102_3348384_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931423.1|3348380_3348896_-	DUF2514 family protein	NA	NA	NA	NA	NA
WP_010931424.1|3348895_3349447_-	lysozyme	NA	NA	NA	NA	NA
WP_010931425.1|3349425_3349668_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931426.1|3349672_3350485_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926428.1|3350484_3350748_-	hypothetical protein	NA	NA	NA	NA	NA
WP_124740660.1|3350788_3350986_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931428.1|3350966_3351383_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931429.1|3351387_3355344_-	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
WP_010931430.1|3355336_3355726_-	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931431.1|3355722_3356256_-	DUF1833 family protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931432.1|3356323_3356683_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931433.1|3356692_3359305_-|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931434.1|3359330_3359621_-	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_003813412.1|3359638_3359968_-	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931435.1|3359977_3360496_-	hypothetical protein	NA	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_010931436.1|3360750_3361251_-	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931437.1|3361258_3361681_-	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_010931438.1|3361677_3362076_-	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931439.1|3362072_3362468_-	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_010931440.1|3362467_3362668_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|3362669_3363152_-	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_010931442.1|3363214_3363466_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|3364140_3365091_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931443.1|3365519_3366122_-	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_010931444.1|3366244_3366487_-	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931445.1|3366492_3367548_-	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931446.1|3367576_3368995_-	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931447.1|3368997_3370275_-|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_019247942.1|3370261_3370747_-|transposase	transposase	transposase	C7U0W1	Enterobacteria_phage	61.5	7.3e-39
WP_005012067.1|3371386_3372337_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_161633094.1|3372593_3373283_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853179.1|3373275_3373527_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_010931451.1|3374081_3374693_+	S24 family peptidase	NA	NA	NA	NA	NA
WP_019247378.1|3374764_3374971_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3375222_3376173_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248926.1|3376271_3377345_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931475.1|3377512_3378307_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010925795.1|3378346_3378871_-	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931474.1|3378863_3380606_-	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010931473.1|3380815_3381574_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931472.1|3381576_3382284_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931471.1|3382300_3383182_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_019247734.1|3383192_3383951_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_019248554.1|3383919_3384675_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931468.1|3384744_3386163_+	amidase	NA	NA	NA	NA	NA
WP_003819076.1|3386184_3386835_-	carbonic anhydrase	NA	NA	NA	NA	NA
WP_033446132.1|3386968_3387304_-	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_010930800.1|3387392_3388343_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931467.1|3388419_3390240_+	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_010931466.1|3390244_3391318_-	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_003814230.1|3391440_3392409_+	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010927008.1|3392482_3393394_+	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814226.1|3393412_3393985_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010931465.1|3394065_3394614_-	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_010931464.1|3394613_3396203_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_003814221.1|3396272_3396512_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_023995141.1|3396552_3397578_-|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_033446131.1|3397643_3398816_-	UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase	NA	NA	NA	NA	NA
WP_010931463.1|3398921_3399374_+	membrane protein	NA	NA	NA	NA	NA
WP_010931462.1|3399383_3400724_-	M24 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931461.1|3401040_3402078_+	sodium:calcium antiporter	NA	NA	NA	NA	NA
WP_003814209.1|3402459_3402819_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041166340.1|3402902_3403844_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879617.1|3403918_3404869_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814206.1|3405162_3406257_+	porin	NA	NA	NA	NA	NA
WP_033446149.1|3406347_3407220_+	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814203.1|3407241_3408081_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_010931459.1|3408156_3409674_+|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_010931458.1|3409770_3410871_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931457.1|3410887_3411310_-	SnoaL-like domain-containing protein	NA	NA	NA	NA	NA
WP_003814195.1|3411332_3411545_-	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931456.1|3411591_3412512_-	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_010931455.1|3412694_3413444_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_003814188.1|3413446_3413776_+	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_033446148.1|3414063_3415416_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	2.1e-51
WP_003814185.1|3415427_3415811_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_010931453.1|3415872_3416673_+	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_005015810.1|3416771_3417722_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 28
NZ_CP013882	Bordetella pertussis strain H876 chromosome, complete genome	4105347	3704338	3734324	4105347	tRNA,transposase	Streptococcus_phage(12.5%)	31	NA	NA
WP_010929577.1|3704338_3705289_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|3705388_3706339_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929878.1|3706335_3706971_-	LysE family transporter	NA	NA	NA	NA	NA
WP_003818466.1|3707100_3708000_+	LysR family transcriptional regulator ArgP	NA	NA	NA	NA	NA
WP_003807278.1|3708095_3708587_+	copper chaperone PCu(A)C	NA	NA	NA	NA	NA
WP_010929877.1|3708633_3709599_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929876.1|3710732_3711974_+	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	24.9	1.9e-14
WP_003807287.1|3712087_3713104_+	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	43.8	3.5e-75
WP_010929875.1|3713138_3713615_-	membrane protein	NA	NA	NA	NA	NA
WP_003807291.1|3713757_3714666_-	hydroxymethylglutaryl-CoA lyase	NA	NA	NA	NA	NA
WP_010929874.1|3714779_3715892_-	DNA-protecting protein DprA	NA	S6BFL3	Thermus_phage	35.0	1.9e-21
WP_023853429.1|3715992_3716478_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_003818477.1|3716614_3717865_+	kynureninase	NA	NA	NA	NA	NA
WP_003807300.1|3717966_3718479_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	43.3	8.5e-22
WP_005013747.1|3718577_3719528_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929873.1|3719593_3720532_+|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	35.7	1.4e-09
WP_010929872.1|3720554_3721181_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_003818481.1|3721177_3721834_-	HAD hydrolase-like protein	NA	NA	NA	NA	NA
WP_010929871.1|3721830_3722433_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929870.1|3722439_3723027_-	TIGR00730 family Rossman fold protein	NA	A0A2I2L3F0	Orpheovirus	23.3	1.1e-07
WP_010929869.1|3723207_3723777_+	bacterioferritin	NA	NA	NA	NA	NA
WP_003807313.1|3723847_3725167_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA	NA
WP_003807315.1|3725273_3725465_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
WP_010929868.1|3725716_3727006_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_010929867.1|3727160_3728156_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807322.1|3728240_3728915_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|3728911_3729862_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816336.1|3730023_3731265_+	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	25.2	4.0e-25
WP_010929866.1|3731261_3732206_+	arginase	NA	A0A0N9R043	Chrysochromulina_ericina_virus	33.3	9.5e-27
WP_005012067.1|3732324_3733275_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|3733373_3734324_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 29
NZ_CP013882	Bordetella pertussis strain H876 chromosome, complete genome	4105347	3754493	3789155	4105347	integrase,transposase	Burkholderia_phage(11.11%)	32	3751080:3751097	3794659:3794676
3751080:3751097	attL	CAGCGTGCTGGCCACCGT	NA	NA	NA	NA
WP_010929851.1|3754493_3755444_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929850.1|3755479_3755947_+	hypothetical protein	NA	Q3HQX1	Burkholderia_phage	71.3	2.1e-43
WP_010926411.1|3756180_3756558_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010926410.1|3756554_3756737_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929849.1|3756740_3757727_+	DNA recombinase	NA	H9C0R8	Aeromonas_phage	57.3	2.0e-67
WP_010929848.1|3757723_3758371_+	YqaJ viral recombinase family protein	NA	A0A0U2BXF3	Paracoccus_phage	41.4	2.0e-31
WP_010929847.1|3758428_3758956_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247983.1|3758992_3760177_+	hypothetical protein	NA	A0A291L9X3	Bordetella_phage	37.8	1.5e-24
WP_010929845.1|3760187_3760529_+	hypothetical protein	NA	A0A0H5ARN8	Pseudomonas_phage	45.3	1.0e-10
WP_010926403.1|3760641_3760842_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929843.1|3760838_3761828_-|integrase	site-specific integrase	integrase	A0A1B1P9F9	Acinetobacter_phage	44.4	4.4e-75
WP_010929841.1|3763314_3765285_-	DUF3220 domain-containing protein	NA	NA	NA	NA	NA
WP_003814626.1|3765526_3765925_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929840.1|3765933_3766857_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3767314_3768265_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927254.1|3768495_3770187_-	membrane protein insertase YidC	NA	NA	NA	NA	NA
WP_003816027.1|3770235_3770508_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	52.2	7.0e-15
WP_003816026.1|3770504_3770876_-	ribonuclease P protein component	NA	NA	NA	NA	NA
WP_003816025.1|3770971_3771106_-	50S ribosomal protein L34	NA	NA	NA	NA	NA
WP_010929554.1|3771511_3772921_+	chromosomal replication initiator protein DnaA	NA	NA	NA	NA	NA
WP_010929839.1|3772923_3774033_+	DNA polymerase III subunit beta	NA	B4UTW9	Rhizobium_phage	32.6	1.2e-41
WP_010929838.1|3774127_3776581_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	34.8	2.3e-112
WP_023853625.1|3776699_3777491_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929836.1|3777610_3779038_+	amidase	NA	NA	NA	NA	NA
WP_010929835.1|3779076_3780048_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929834.1|3780466_3781630_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010929833.1|3781717_3782563_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3784119_3785070_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818201.1|3785624_3785999_-	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_010929807.1|3786073_3787132_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_005012067.1|3787155_3788106_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|3788204_3789155_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
3794659:3794676	attR	CAGCGTGCTGGCCACCGT	NA	NA	NA	NA
>prophage 30
NZ_CP013882	Bordetella pertussis strain H876 chromosome, complete genome	4105347	4004415	4069327	4105347	transposase	Planktothrix_phage(40.0%)	59	NA	NA
WP_039249574.1|4004415_4004901_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_153302797.1|4004989_4005127_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931647.1|4005119_4006100_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019248461.1|4006366_4007176_+	pertussis toxin ADP-ribosyltransferase subunit PtxA	NA	NA	NA	NA	NA
WP_014906114.1|4007215_4007896_+	pertussis toxin binding subunit PtxB	NA	NA	NA	NA	NA
WP_010929491.1|4007889_4008348_+	pertussis toxin subunit 4	NA	NA	NA	NA	NA
WP_023853616.1|4008359_4008722_+	pertussis toxin binding subunit PtxD	NA	NA	NA	NA	NA
WP_010931651.1|4008804_4009488_+	pertussis toxin binding subunit PtxE	NA	NA	NA	NA	NA
WP_010929493.1|4009543_4009852_+	type IV secretion system protein PtlA	NA	NA	NA	NA	NA
WP_010929494.1|4009870_4010185_+	type IV secretion system protein PtlB	NA	NA	NA	NA	NA
WP_010931652.1|4010181_4012656_+	type IV secretion system protein PtlC	NA	NA	NA	NA	NA
WP_010931653.1|4012663_4014055_+	type IV secretion system protein PtlD	NA	NA	NA	NA	NA
WP_010929497.1|4014051_4014237_+	type IV secretion system protein PtlI	NA	NA	NA	NA	NA
WP_010929498.1|4014215_4014917_+	type IV secretion system peptidoglycanase PtlE	NA	NA	NA	NA	NA
WP_010931654.1|4014913_4015735_+	type IV secretion system protein PtlF	NA	NA	NA	NA	NA
WP_010931655.1|4015715_4016840_+	type IV secretion system protein PtlG	NA	NA	NA	NA	NA
WP_010929500.1|4016832_4017852_+	type IV secretion system protein PtlH	NA	NA	NA	NA	NA
WP_010931656.1|4018057_4018948_-	DMT family transporter	NA	NA	NA	NA	NA
WP_010931657.1|4019090_4019984_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003815873.1|4020066_4020441_+	DUF1232 domain-containing protein	NA	NA	NA	NA	NA
WP_010931658.1|4020418_4021828_+	DUF2868 domain-containing protein	NA	NA	NA	NA	NA
WP_003815876.1|4021820_4023203_+	GTPase/DUF3482 domain-containing protein	NA	A0A0R6PHS5	Moraxella_phage	38.9	9.9e-57
WP_003815878.1|4023537_4025142_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931659.1|4025219_4026191_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931660.1|4026201_4027128_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931661.1|4027518_4028469_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931662.1|4028638_4029865_+	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA	NA	NA	NA	NA
WP_010931663.1|4030064_4030931_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_003815027.1|4030923_4031886_+	Nudix family hydrolase	NA	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	53.4	1.9e-06
WP_010927663.1|4031986_4032937_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|4033035_4033986_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|4034084_4035035_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994937.1|4035031_4036525_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_003815032.1|4036521_4039629_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931665.1|4039625_4042694_-	MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931666.1|4042690_4043941_-	MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_023853184.1|4044121_4044874_-	cell division protein ZapD	NA	NA	NA	NA	NA
WP_010931667.1|4044915_4045560_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_003820519.1|4045568_4046408_-	prepilin peptidase	NA	NA	NA	NA	NA
WP_003815047.1|4046648_4047392_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815049.1|4047474_4047822_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003815051.1|4047919_4048762_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_003815053.1|4048806_4049694_-	segregation/condensation protein A	NA	NA	NA	NA	NA
WP_003815055.1|4049720_4049909_-	DUF3460 family protein	NA	NA	NA	NA	NA
WP_010931669.1|4050006_4051464_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_010931670.1|4051450_4052977_+	glycerol kinase GlpK	NA	NA	NA	NA	NA
WP_003815061.1|4052995_4053463_-	membrane protein	NA	NA	NA	NA	NA
WP_010931671.1|4053462_4054485_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003815064.1|4054605_4055346_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	4.4e-35
WP_003815066.1|4055400_4056501_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815068.1|4056502_4057693_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815070.1|4057812_4058829_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	42.1	1.0e-71
WP_003815073.1|4059147_4059819_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	38.2	9.5e-29
WP_010927126.1|4059815_4060724_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_010931672.1|4060935_4061583_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA	NA
WP_033446142.1|4065443_4066511_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
WP_003815084.1|4066521_4067331_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815086.1|4067420_4068194_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_010929577.1|4068376_4069327_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
