The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP013891	Bordetella pertussis strain J121 chromosome, complete genome	4103084	27282	70036	4103084	transposase,tRNA	Synechococcus_phage(50.0%)	42	NA	NA
WP_010930363.1|27282_28233_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995007.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929578.1|28674_29109_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247164.1|29141_30359_-	thiolase family protein	NA	NA	NA	NA	NA
WP_010929580.1|30364_30862_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_019247165.1|31069_32005_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929582.1|32214_33006_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929583.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010929584.1|34625_35576_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814398.1|35572_36763_-	MFS transporter	NA	NA	NA	NA	NA
WP_010929585.1|37012_37924_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010929586.1|37925_40064_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003814404.1|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|41318_42212_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247766.1|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|42687_43218_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_023852754.1|43346_43646_-	DUF1974 domain-containing protein	NA	NA	NA	NA	NA
WP_010929588.1|43663_44614_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929589.1|45200_45749_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|45720_45957_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|46084_46978_+	membrane protein	NA	NA	NA	NA	NA
WP_010929590.1|48147_49395_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|49391_50006_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_010929591.1|50141_51092_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443813.1|51134_52391_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|53622_54357_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|54362_54953_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|54977_55667_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|55663_56425_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|56504_57404_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|57497_58448_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929595.1|59248_60475_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010929596.1|60474_60894_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929597.1|61077_62019_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248755.1|62442_63417_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929599.1|63473_64055_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010929600.1|64067_64370_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_029443770.1|64488_65547_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_019247832.1|65581_66853_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010929603.1|67482_68664_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929584.1|69085_70036_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP013891	Bordetella pertussis strain J121 chromosome, complete genome	4103084	77634	136108	4103084	transposase,tRNA	Planktothrix_phage(22.22%)	53	NA	NA
WP_005012067.1|77634_78585_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166334.1|78659_79604_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929608.1|79600_81475_-	polysaccharide biosynthesis protein	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
WP_003807102.1|82822_83527_-	DUF2837 family protein	NA	NA	NA	NA	NA
WP_003807104.1|83523_84630_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010929610.1|84891_85485_-	sugar transferase	NA	NA	NA	NA	NA
WP_023853419.1|85481_86669_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	NA	NA	NA	NA
WP_010929612.1|86731_87991_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010929613.1|88014_89103_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
WP_010929614.1|89110_90211_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
WP_003807114.1|90214_90790_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_003807115.1|90793_91846_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_010929615.1|91976_92984_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
WP_010929616.1|92985_94272_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
WP_010929617.1|94468_95272_-	type III pantothenate kinase	NA	NA	NA	NA	NA
WP_010929618.1|95268_96135_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_010929619.1|96209_97340_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003807131.1|97339_98179_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
WP_010929620.1|99111_99714_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929621.1|99743_100397_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003807138.1|100529_101786_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
WP_023853421.1|101866_102733_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_003818417.1|102808_103084_+	YbeD family protein	NA	NA	NA	NA	NA
WP_010929623.1|103091_103754_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
WP_003807146.1|103815_104817_+	lipoyl synthase	NA	NA	NA	NA	NA
WP_003807148.1|104831_105380_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
WP_010929624.1|105437_106334_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_010929625.1|106330_107392_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
WP_010929626.1|107427_108378_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929627.1|109277_110471_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_010929628.1|110552_111182_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_010927242.1|111243_111927_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_023853376.1|111936_113619_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003815933.1|113906_114254_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
WP_003815930.1|114344_114662_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|114944_115961_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815929.1|116036_116837_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003815927.1|116833_117709_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010929633.1|117719_119012_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929634.1|119054_120095_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
WP_010929635.1|120200_121022_-	phosphodiesterase	NA	NA	NA	NA	NA
WP_005012067.1|121122_122073_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905488.1|122171_123077_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.7	9.8e-21
WP_003815918.1|123073_123907_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010929637.1|124743_125754_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_019247800.1|125750_126140_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010929638.1|127033_128287_+	amidase	NA	NA	NA	NA	NA
WP_010929639.1|128377_130078_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_010929640.1|130504_131152_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853393.1|131150_132590_+	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_023853394.1|132700_132985_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_010929512.1|133012_133891_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|135157_136108_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP013891	Bordetella pertussis strain J121 chromosome, complete genome	4103084	164894	225405	4103084	protease,transposase,tRNA	Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)	51	NA	NA
WP_005015810.1|164894_165845_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929659.1|167288_168191_-	YgcG family protein	NA	NA	NA	NA	NA
WP_003815889.1|168168_168798_-	LemA family protein	NA	NA	NA	NA	NA
WP_010929660.1|169080_170511_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.8	5.8e-44
WP_010929661.1|170544_171174_+	LysE family transporter	NA	NA	NA	NA	NA
WP_003815895.1|171222_172830_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
WP_010929663.1|172854_173538_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815898.1|173619_174096_-	bacterioferritin	NA	NA	NA	NA	NA
WP_010929591.1|174302_175253_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929664.1|176368_176896_+	META domain-containing protein	NA	NA	NA	NA	NA
WP_010929665.1|176987_177803_+	META and DUF4377 domain-containing protein	NA	NA	NA	NA	NA
WP_003808370.1|177863_178598_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_010929666.1|178635_180714_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
WP_003808374.1|180963_181236_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446322.1|181337_182423_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010929668.1|182426_184331_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA	NA
WP_014486044.1|184327_188002_+	DUF490 domain-containing protein	NA	NA	NA	NA	NA
WP_010929670.1|188062_188626_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
WP_003808385.1|188633_189056_-	glyoxalase	NA	NA	NA	NA	NA
WP_010929671.1|189083_189503_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_077274090.1|189531_189978_-	GNAT family N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	29.4	1.2e-08
WP_003808391.1|190104_190602_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003808393.1|190756_193027_+	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA	NA
WP_019249381.1|193102_194308_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010929591.1|194406_195357_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929673.1|195459_196095_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.8e-83
WP_019248671.1|196091_196985_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_010929675.1|197379_198480_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_010929676.1|198561_198936_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_010929677.1|198995_201860_+	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
WP_010929678.1|202004_202745_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929679.1|202814_204026_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929680.1|204054_205023_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931070.1|205636_206587_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929699.1|206743_207067_+	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
WP_023853200.1|207171_208212_-	cyclase	NA	NA	NA	NA	NA
WP_010929697.1|208217_208997_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
WP_003807672.1|209042_209339_-	YciI family protein	NA	NA	NA	NA	NA
WP_003807674.1|209364_209640_-	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
WP_003819086.1|209696_210341_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010929696.1|210340_211027_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_033446325.1|211225_212008_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929694.1|212058_212784_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929693.1|212815_214165_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929692.1|214276_215209_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_033455792.1|215666_218462_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
WP_023994893.1|219055_221899_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_010929689.1|222069_222789_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_010929688.1|222827_223376_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929687.1|223530_224430_+	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_005012808.1|224454_225405_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP013891	Bordetella pertussis strain J121 chromosome, complete genome	4103084	233337	286925	4103084	protease,transposase,tRNA	Bacillus_phage(25.0%)	47	NA	NA
WP_005012067.1|233337_234288_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|234374_235325_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930742.1|235321_236272_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929700.1|236370_237168_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003814363.1|238117_238528_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA	NA
WP_003814358.1|239549_240293_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814356.1|240336_241380_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814355.1|241550_243653_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_003814351.1|245063_246020_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929701.1|246038_246530_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_010929702.1|246526_247882_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
WP_010929703.1|247882_248581_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_010929704.1|248577_249279_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_003814339.1|249531_250581_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
WP_003814337.1|250686_251628_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_010929705.1|251624_253514_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
WP_003814332.1|253600_254239_+	membrane protein	NA	NA	NA	NA	NA
WP_019247543.1|254381_255767_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
WP_010929706.1|255697_256234_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_010929707.1|256385_257777_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_010929708.1|257793_258774_-	AEC family transporter	NA	NA	NA	NA	NA
WP_003814324.1|258909_259893_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
WP_010929709.1|259957_260857_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814321.1|260963_262718_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_010929710.1|262725_263850_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929711.1|263863_264844_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929591.1|265574_266525_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929712.1|267084_267630_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852659.1|267755_269333_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004567834.1|269348_270503_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_003817696.1|270516_270642_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_010929714.1|270638_272390_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
WP_010929715.1|272386_274066_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
WP_010929716.1|274128_274677_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.3e-28
WP_010929717.1|275819_276098_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|277141_278092_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077068974.1|278078_278294_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929718.1|278369_278531_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_003815821.1|279197_279647_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
WP_003815819.1|279656_280268_-	stringent starvation protein A	NA	NA	NA	NA	NA
WP_010929720.1|280426_281275_-	cytochrome c1	NA	NA	NA	NA	NA
WP_003815816.1|281300_282683_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_003815815.1|282747_283389_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_010929721.1|283528_283987_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_010927226.1|284011_284788_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_014906092.1|284841_285978_+|protease	trypsin-like serine protease	protease	W5SAB9	Pithovirus	31.2	1.2e-07
WP_077108688.1|285974_286925_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP013891	Bordetella pertussis strain J121 chromosome, complete genome	4103084	390858	448367	4103084	transposase	Orpheovirus(14.29%)	50	NA	NA
WP_005012067.1|390858_391809_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927231.1|391945_392863_+	reductase	NA	NA	NA	NA	NA
WP_003815842.1|392859_393108_+	glutaredoxin family protein	NA	NA	NA	NA	NA
WP_003815840.1|393104_394310_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486045.1|394382_395378_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486046.1|395400_396621_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486047.1|396617_397262_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248476.1|398992_399802_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486048.1|400106_401060_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	42.5	5.6e-59
WP_014486049.1|401158_402142_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486050.1|402068_402770_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486051.1|402818_403589_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_019247259.1|403585_404764_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486052.1|404931_406638_-	thiamine pyrophosphate-requiring protein	NA	NA	NA	NA	NA
WP_014486053.1|406634_407531_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486054.1|407571_409161_-	sulfurtransferase	NA	NA	NA	NA	NA
WP_003807867.1|409210_410203_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807865.1|410271_410871_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014486055.1|411331_412312_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929577.1|412387_413338_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122777.1|413426_414341_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929782.1|414337_414997_+	LysE family translocator	NA	NA	NA	NA	NA
WP_003814709.1|415086_416010_+	alpha/beta fold hydrolase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	27.2	4.8e-07
WP_010929783.1|416015_416471_-	multidrug/biocide efflux PACE transporter	NA	NA	NA	NA	NA
WP_010929784.1|416467_417571_-	ChbG/HpnK family deacetylase	NA	NA	NA	NA	NA
WP_157734664.1|417526_417799_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077108689.1|417758_419378_-	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_003814720.1|419374_420433_-	glycosyltransferase family 2 protein	NA	I1TED8	Salmonella_phage	40.5	2.8e-59
WP_033446199.1|420562_421057_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_022997984.1|421149_422127_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929785.1|422322_423528_+	sodium/glutamate symporter	NA	NA	NA	NA	NA
WP_010929786.1|423524_425036_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_003814726.1|425051_426365_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_003814728.1|426555_426735_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814730.1|427144_427879_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
WP_010929577.1|430323_431274_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247421.1|431405_431804_-	GTP-binding protein	NA	E4ZFJ7	Streptococcus_phage	44.3	9.0e-19
WP_003814701.1|432214_432685_-	universal stress protein	NA	NA	NA	NA	NA
WP_003820700.1|432773_433118_-	TIGR01244 family phosphatase	NA	NA	NA	NA	NA
WP_010929788.1|433217_434618_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010929789.1|436406_436925_-	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	38.9	2.1e-12
WP_003814694.1|437035_437791_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	40.8	2.9e-42
WP_003814691.1|437986_439219_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929791.1|439211_439997_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_003814685.1|440063_441035_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003814681.1|441045_442023_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247419.1|442148_443321_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010929793.1|443347_444376_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003814674.1|444441_445635_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_005012067.1|447416_448367_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
NZ_CP013891	Bordetella pertussis strain J121 chromosome, complete genome	4103084	590421	651612	4103084	protease,transposase	uncultured_Mediterranean_phage(40.0%)	55	NA	NA
WP_005013747.1|590421_591372_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446133.1|591847_592738_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_010931496.1|592734_593556_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_019247235.1|593755_594247_+	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_019247236.1|594265_595339_+	CHAD domain-containing protein	NA	NA	NA	NA	NA
WP_023853086.1|595385_596489_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
WP_003808577.1|596564_597185_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_003808574.1|597205_597715_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	42.1	1.2e-28
WP_003808570.1|597769_598021_+	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	53.4	1.6e-18
WP_010931494.1|598084_599218_+	benzoate/H(+) symporter BenE family transporter	NA	NA	NA	NA	NA
WP_003808567.1|599225_599612_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931493.1|599608_602128_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003808563.1|602556_602895_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003808562.1|602891_603398_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_010931492.1|603459_604260_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931491.1|604370_605312_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931490.1|605405_606941_-	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931489.1|608620_610471_-	dipeptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.2	1.6e-17
WP_003808549.1|610474_611308_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931488.1|611307_612249_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931487.1|612500_613472_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931486.1|613613_615902_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003808542.1|616208_617117_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010931485.1|617171_618137_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931484.1|618211_619873_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_010931483.1|619944_620655_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|620803_621754_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814152.1|622452_622836_+	membrane protein	NA	NA	NA	NA	NA
WP_010927005.1|622893_623496_+	DUF2946 family protein	NA	NA	NA	NA	NA
WP_003820995.1|623513_623915_-	DoxX family protein	NA	NA	NA	NA	NA
WP_010931482.1|624030_624942_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931481.1|624938_625520_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_003814165.1|626314_627049_+	arginyltransferase	NA	NA	NA	NA	NA
WP_010931480.1|627089_628139_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_003814172.1|628286_628865_-	TIGR01841 family phasin	NA	NA	NA	NA	NA
WP_010931479.1|629251_630229_+	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA	NA
WP_010931478.1|630322_634717_-	dermonecrotic toxin	NA	NA	NA	NA	NA
WP_003814178.1|634917_635766_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931477.1|635924_636737_-	competence/damage-inducible protein A	NA	NA	NA	NA	NA
WP_005015810.1|636792_637743_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931453.1|637841_638642_-	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_003814185.1|638703_639087_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_033446148.1|639098_640451_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	2.1e-51
WP_003814188.1|640738_641068_-	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_010931455.1|641070_641820_-	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010931456.1|642002_642923_+	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_003814195.1|642969_643182_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931457.1|643204_643627_+	SnoaL-like domain-containing protein	NA	NA	NA	NA	NA
WP_010931458.1|643643_644744_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931459.1|644840_646358_-|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_003814203.1|646433_647273_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_033446149.1|647294_648167_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814206.1|648257_649352_-	porin	NA	NA	NA	NA	NA
WP_076879617.1|649645_650596_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166340.1|650670_651612_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
NZ_CP013891	Bordetella pertussis strain J121 chromosome, complete genome	4103084	656936	703127	4103084	terminase,tail,transposase,tRNA	uncultured_Caudovirales_phage(18.18%)	50	NA	NA
WP_023995141.1|656936_657962_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814221.1|658002_658242_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931464.1|658311_659901_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_010931465.1|659900_660449_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_003814226.1|660529_661102_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010927008.1|661120_662032_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814230.1|662105_663074_-	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010931466.1|663196_664270_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_010931467.1|664274_666095_-	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_010930800.1|666171_667122_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446132.1|667210_667546_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_003819076.1|667679_668330_+	carbonic anhydrase	NA	NA	NA	NA	NA
WP_010931468.1|668351_669770_-	amidase	NA	NA	NA	NA	NA
WP_019248554.1|669839_670595_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247734.1|670563_671322_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931471.1|671332_672214_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931472.1|672230_672938_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931473.1|672940_673699_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931474.1|673908_675651_+	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010925795.1|675643_676168_+	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931475.1|676207_677002_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248926.1|677169_678243_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|678341_679292_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247378.1|679543_679750_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931451.1|679821_680433_-	S24 family peptidase	NA	NA	NA	NA	NA
WP_023853179.1|680987_681239_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_161633094.1|681231_681921_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|682177_683128_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247942.1|683767_684253_+|transposase	transposase	transposase	C7U0W1	Enterobacteria_phage	61.5	7.3e-39
WP_010931447.1|684239_685517_+|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_010931446.1|685519_686938_+	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931445.1|686966_688022_+	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931444.1|688027_688270_+	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931443.1|688392_688995_+	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_005012808.1|689423_690374_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931442.1|691048_691300_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|691362_691845_+	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_162096760.1|691858_692047_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931439.1|692046_692442_+	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_010931438.1|692438_692837_+	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931437.1|692833_693256_+	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_010931436.1|693263_693764_+	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931435.1|694018_694537_+	hypothetical protein	NA	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_003813412.1|694546_694876_+	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931434.1|694893_695184_+	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_010931433.1|695209_697822_+|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931432.1|697831_698191_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931431.1|698258_698792_+	DUF1833 family protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931430.1|698788_699178_+	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931429.1|699170_703127_+	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
>prophage 8
NZ_CP013891	Bordetella pertussis strain J121 chromosome, complete genome	4103084	709293	763223	4103084	transposase,tRNA	Planktothrix_phage(50.0%)	46	NA	NA
WP_003814636.1|709293_711024_+|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
WP_010931419.1|711076_711505_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814641.1|711507_712188_+	protein TolQ	NA	NA	NA	NA	NA
WP_003814643.1|712187_712646_+	protein TolR	NA	NA	NA	NA	NA
WP_010931418.1|712682_713657_+	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_010931417.1|713673_714990_+	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_003814650.1|715021_715519_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_003814652.1|715605_716295_+	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_010931416.1|716294_717344_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003814657.1|717340_718135_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
WP_019247923.1|718303_718654_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247922.1|718629_719187_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012808.1|720316_721267_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929184.1|723404_724634_+	spore maturation protein	NA	NA	NA	NA	NA
WP_003814419.1|724636_726079_-	pyruvate kinase	NA	NA	NA	NA	NA
WP_010931414.1|726183_727329_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_010931413.1|727360_728158_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931412.1|728182_729742_-	chaperone SurA	NA	NA	NA	NA	NA
WP_010931411.1|729738_732111_-	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931410.1|732220_733324_+	phosphotransferase	NA	NA	NA	NA	NA
WP_010931409.1|733323_734016_+	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_003814436.1|734159_734861_+	membrane protein	NA	NA	NA	NA	NA
WP_003814437.1|734845_735223_-	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_005012067.1|735954_736905_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814441.1|737064_737937_-	oxaloacetate decarboxylase	NA	NA	NA	NA	NA
WP_003814443.1|738277_738496_+	DUF1059 domain-containing protein	NA	NA	NA	NA	NA
WP_019247242.1|738535_739915_-	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_010929976.1|739956_741354_-	amidase family protein	NA	NA	NA	NA	NA
WP_010927038.1|741393_743046_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.8	6.0e-16
WP_010929977.1|743049_743934_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929978.1|743933_744875_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929979.1|744953_746573_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929980.1|746739_747555_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814459.1|747622_748192_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|748192_749143_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814461.1|749797_750895_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_003814462.1|750928_752194_+	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929591.1|752351_753302_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929982.1|753545_754136_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_010929983.1|754151_756596_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_003814467.1|756715_757687_-	FecR family protein	NA	NA	NA	NA	NA
WP_023852739.1|757818_758343_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_005012067.1|758302_759253_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929984.1|759474_761670_-	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_020699729.1|761742_762150_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|762272_763223_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP013891	Bordetella pertussis strain J121 chromosome, complete genome	4103084	885812	953788	4103084	transposase	Bacillus_phage(33.33%)	56	NA	NA
WP_023994644.1|885812_886829_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003813988.1|887025_888009_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930019.1|889607_890996_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003813991.1|891026_892016_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813992.1|892126_893359_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003813993.1|893640_894441_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930018.1|894463_896695_-	BCCT family transporter	NA	NA	NA	NA	NA
WP_010930017.1|897482_897929_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_003813996.1|897950_898697_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_003813997.1|898840_899818_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
WP_010930016.1|900451_901063_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
WP_003813999.1|901056_902274_-	threonine ammonia-lyase	NA	NA	NA	NA	NA
WP_005013747.1|902414_903365_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814000.1|903361_904081_-	lipoprotein	NA	NA	NA	NA	NA
WP_003821234.1|904201_906361_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_003814002.1|906451_906721_-	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_005019401.1|906809_907016_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814003.1|907014_907542_+	lipoprotein	NA	NA	NA	NA	NA
WP_003814004.1|907560_908340_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930015.1|908507_909524_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_003814006.1|909596_910088_-	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_003814007.1|910098_911814_-	acetolactate synthase 3 catalytic subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.3	3.1e-60
WP_005012067.1|912977_913928_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930051.1|913924_915757_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
WP_010930052.1|916155_916815_+	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
WP_010930054.1|917342_918023_-	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_010930055.1|918304_919021_+	flagellar brake protein	NA	NA	NA	NA	NA
WP_010930056.1|919035_920337_-	phospholipase	NA	NA	NA	NA	NA
WP_029444137.1|922481_925370_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010930057.1|925593_926946_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_004568140.1|926974_927496_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_003819989.1|927492_928947_+	carboxylase	NA	NA	NA	NA	NA
WP_023852826.1|928981_929230_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247557.1|929335_930211_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010930060.1|930236_931292_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930061.1|931304_932096_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930062.1|932128_933499_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_005012067.1|934675_935626_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930064.1|935678_935900_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810832.1|936059_936272_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|936391_937510_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810837.1|937606_937822_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810839.1|938015_938267_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930066.1|938379_939330_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810840.1|939326_939710_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_023852913.1|939764_941579_-	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
WP_010930068.1|941728_942556_+	oxidoreductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
WP_010930069.1|942601_943582_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_003810850.1|943578_943791_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810851.1|943787_944969_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_019248496.1|945132_945867_+	serine/threonine protein phosphatase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
WP_010930071.1|945868_948481_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_003810859.1|948616_950530_-	S9 family peptidase	NA	NA	NA	NA	NA
WP_010930072.1|951145_951556_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003810865.1|951653_952739_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_005012067.1|952837_953788_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP013891	Bordetella pertussis strain J121 chromosome, complete genome	4103084	997322	1069838	4103084	transposase,tRNA	Enterococcus_phage(14.29%)	59	NA	NA
WP_005012067.1|997322_998273_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930118.1|998377_999427_+	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
WP_010929632.1|999564_1000581_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010926548.1|1002089_1002662_-	chorismate lyase	NA	NA	NA	NA	NA
WP_010930119.1|1002721_1003453_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_029443805.1|1003504_1004422_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486063.1|1008404_1009787_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010930123.1|1009856_1010108_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_010930124.1|1010253_1010868_-	SCO family protein	NA	NA	NA	NA	NA
WP_010930125.1|1011054_1013115_-	M3 family metallopeptidase	NA	NA	NA	NA	NA
WP_003811948.1|1013244_1014096_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
WP_010930126.1|1014092_1014719_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003817147.1|1014715_1016470_-	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_010930127.1|1016762_1019468_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_010930128.1|1019480_1021142_+	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
WP_010930129.1|1021154_1022945_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
WP_003817151.1|1023166_1024342_-	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_010929584.1|1024384_1025335_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930130.1|1025433_1026174_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_010930131.1|1026368_1028405_+	transketolase	NA	NA	NA	NA	NA
WP_010930132.1|1028422_1029433_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_010930133.1|1029550_1030744_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_010930134.1|1030773_1031547_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010930135.1|1031543_1032734_-	acetate kinase	NA	NA	NA	NA	NA
WP_003809454.1|1032759_1033698_-	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_010930136.1|1033694_1036043_-	DUF3141 domain-containing protein	NA	NA	NA	NA	NA
WP_010930137.1|1036197_1036839_-	glutathione transferase	NA	NA	NA	NA	NA
WP_023994624.1|1038168_1038321_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930138.1|1038352_1038901_-	diguanylate cyclase	NA	NA	NA	NA	NA
WP_003819814.1|1038919_1039405_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930139.1|1039582_1040521_+	DnaJ domain-containing protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
WP_003809467.1|1040523_1040841_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247197.1|1040886_1041831_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010930141.1|1043511_1044162_+	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
WP_003809479.1|1044215_1044551_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930142.1|1044547_1045408_+	M23 family metallopeptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
WP_003819817.1|1045424_1045706_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003809486.1|1045779_1046043_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_005012067.1|1046286_1047237_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811933.1|1047535_1048273_-	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
WP_010930143.1|1048708_1049032_+	flagellar transcriptional regulator FlhD	NA	NA	NA	NA	NA
WP_003811929.1|1049066_1049627_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
WP_003811927.1|1049747_1050623_+	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
WP_003817154.1|1050635_1051583_+	flagellar motor protein MotB	NA	NA	NA	NA	NA
WP_019247393.1|1051684_1051978_+	response regulator	NA	NA	NA	NA	NA
WP_010930144.1|1052004_1054062_+	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_003811919.1|1054076_1054577_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_010930145.1|1054650_1056357_+	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
WP_010930146.1|1057220_1058273_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_003811911.1|1058325_1058715_+	chemotaxis protein CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
WP_003817162.1|1058723_1059356_+	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_010931363.1|1059455_1060472_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003819773.1|1061302_1062310_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_014486064.1|1062306_1063950_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_010930149.1|1063946_1064834_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003809396.1|1064974_1065448_-	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_010930151.1|1065437_1066460_-	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
WP_015041211.1|1066456_1067884_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010931363.1|1068821_1069838_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_CP013891	Bordetella pertussis strain J121 chromosome, complete genome	4103084	1073591	1134618	4103084	holin,transposase,tRNA	Catovirus(20.0%)	50	NA	NA
WP_010930155.1|1073591_1074728_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
WP_023853534.1|1074724_1075798_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_003809423.1|1075955_1077392_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_010930157.1|1077482_1078124_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_023853536.1|1078459_1079476_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930160.1|1082622_1084044_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_003809431.1|1084307_1085024_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003809432.1|1085108_1085426_+	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003819794.1|1085466_1085880_+|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_010930161.1|1085881_1086241_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853525.1|1086283_1087828_-	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
WP_010930163.1|1087911_1088742_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_010930164.1|1088776_1089931_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_010930165.1|1089973_1090846_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486065.1|1090962_1093251_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003809441.1|1094457_1094922_+	barstar family protein	NA	NA	NA	NA	NA
WP_005013747.1|1094948_1095899_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930167.1|1096266_1097043_-	phosphate ABC transporter ATP-binding protein PstB	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
WP_003809638.1|1097087_1097945_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_010930169.1|1097966_1098983_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_014486066.1|1099117_1100158_-	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
WP_010930171.1|1100352_1102434_-	polyphosphate kinase 1	NA	NA	NA	NA	NA
WP_010930172.1|1102669_1104163_+	exopolyphosphatase	NA	NA	NA	NA	NA
WP_003809629.1|1104393_1105188_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003819875.1|1105408_1106767_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_010930173.1|1106763_1107606_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
WP_010930174.1|1107624_1109511_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
WP_162096758.1|1109452_1109704_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930175.1|1109748_1110381_-	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
WP_003809618.1|1110399_1111002_+	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_005012067.1|1111153_1112104_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_161633091.1|1112684_1113392_+	DUF192 domain-containing protein	NA	NA	NA	NA	NA
WP_003812707.1|1113750_1114737_-	homoserine kinase	NA	NA	NA	NA	NA
WP_010930178.1|1114876_1115890_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_005012067.1|1115886_1116837_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812703.1|1116949_1117408_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003812701.1|1117444_1118758_-	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_010930180.1|1118775_1119147_+	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
WP_019248549.1|1119143_1120607_+	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
WP_010930182.1|1120747_1121476_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_010930183.1|1121457_1124307_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010929591.1|1124519_1125470_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930184.1|1125637_1126462_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
WP_010930185.1|1126461_1127340_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930186.1|1128244_1129360_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_020699602.1|1129388_1130183_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.3	1.2e-11
WP_010930188.1|1130179_1132045_+	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
WP_003812436.1|1132123_1132756_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930189.1|1132752_1133055_-	membrane protein	NA	NA	NA	NA	NA
WP_010930190.1|1133097_1134618_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
>prophage 12
NZ_CP013891	Bordetella pertussis strain J121 chromosome, complete genome	4103084	1152189	1217772	4103084	transposase,tRNA	Erysipelothrix_phage(33.33%)	52	NA	NA
WP_023853221.1|1152189_1153986_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248398.1|1153985_1154954_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816844.1|1155023_1155869_+	PHP domain-containing protein	NA	NA	NA	NA	NA
WP_003812405.1|1155936_1156491_+	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_010930198.1|1156537_1157488_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930199.1|1157586_1158219_-	fimbrial protein	NA	NA	NA	NA	NA
WP_010930200.1|1158382_1160665_-	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_010930201.1|1160819_1163516_-	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA	NA
WP_010930202.1|1163641_1164130_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813631.1|1166540_1169411_+	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_010930204.1|1169456_1170671_+	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_003813626.1|1170900_1172328_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	2.1e-41
WP_023853245.1|1172425_1173517_+	cell division protein ZapE	NA	NA	NA	NA	NA
WP_010930206.1|1173529_1174288_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003813621.1|1174375_1175278_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|1175274_1176225_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930207.1|1176354_1177338_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813618.1|1177392_1178115_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930211.1|1179593_1180949_+|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930212.1|1181029_1183405_-	RNA-binding transcriptional accessory protein	NA	NA	NA	NA	NA
WP_010930213.1|1183569_1185645_+	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	30.0	2.4e-75
WP_033446255.1|1185706_1186501_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_010930214.1|1186608_1187571_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_019247742.1|1187558_1188314_+	peptidoglycan editing factor PgeF	NA	NA	NA	NA	NA
WP_010930216.1|1188421_1190059_+	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA	NA
WP_003813586.1|1190126_1190864_+	acetoacetyl-CoA reductase	NA	NA	NA	NA	NA
WP_003813585.1|1190966_1191542_+	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA	NA
WP_010930217.1|1191714_1192251_+	membrane protein	NA	NA	NA	NA	NA
WP_033451623.1|1192283_1192598_+	cupredoxin domain-containing protein	NA	NA	NA	NA	NA
WP_010930218.1|1192613_1193459_+	membrane protein	NA	NA	NA	NA	NA
WP_003821443.1|1193497_1194877_+	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_003813574.1|1194954_1195836_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_010929956.1|1195934_1196885_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811632.1|1196881_1197292_-	VOC family protein	NA	NA	NA	NA	NA
WP_010930219.1|1197399_1198254_-	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_003811636.1|1198246_1199209_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930220.1|1199254_1200379_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	Q6A202	Oenococcus_phage	28.3	1.5e-31
WP_019247966.1|1200484_1201363_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930222.1|1201487_1202267_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930223.1|1202420_1203842_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930224.1|1204276_1205974_+	sodium:solute symporter family protein	NA	NA	NA	NA	NA
WP_010930225.1|1206200_1207142_-	LD-carboxypeptidase	NA	NA	NA	NA	NA
WP_010930226.1|1207468_1208215_+	aldolase	NA	NA	NA	NA	NA
WP_033446252.1|1208222_1209149_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930228.1|1209270_1210188_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003811660.1|1210227_1211181_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811662.1|1211205_1211784_+	amino acid synthesis family protein	NA	NA	NA	NA	NA
WP_010930229.1|1213457_1214066_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930230.1|1214143_1214497_-	NirD/YgiW/YdeI family stress tolerance protein	NA	NA	NA	NA	NA
WP_010930231.1|1214580_1215570_-	succinylglutamate desuccinylase	NA	NA	NA	NA	NA
WP_076879566.1|1215772_1216723_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853639.1|1216821_1217772_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP013891	Bordetella pertussis strain J121 chromosome, complete genome	4103084	1316908	1385395	4103084	transposase	Planktothrix_phage(33.33%)	58	NA	NA
WP_005012808.1|1316908_1317859_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930283.1|1318627_1319266_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_019247793.1|1320155_1320602_+	glutamate racemase	NA	NA	NA	NA	NA
WP_010930284.1|1320683_1321385_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.4	1.3e-17
WP_003811277.1|1321385_1322153_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.4	1.2e-14
WP_010930285.1|1322149_1323388_-	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA	NA
WP_003811272.1|1323387_1324314_-	high-affinity branched-chain amino acid ABC transporter permease LivH	NA	NA	NA	NA	NA
WP_010930286.1|1324416_1325532_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005015810.1|1325547_1326498_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930287.1|1326851_1327433_-	queuosine precursor transporter	NA	A0A2I7SAW6	Vibrio_phage	37.3	9.4e-17
WP_003811267.1|1327429_1328263_-	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
WP_010930288.1|1328473_1329787_+	sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA	NA	NA	NA	NA
WP_003811262.1|1329963_1330845_+	sn-glycerol-3-phosphate ABC transporter permease UgpA	NA	NA	NA	NA	NA
WP_003811259.1|1330864_1331716_+	sn-glycerol-3-phosphate ABC transporter permease UgpE	NA	NA	NA	NA	NA
WP_010930289.1|1331768_1332857_+	sn-glycerol-3-phosphate import ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	31.2	2.2e-19
WP_010930290.1|1332967_1334095_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003811244.1|1334329_1334941_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_005012808.1|1335039_1335990_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811293.1|1336211_1336589_-	DUF423 domain-containing protein	NA	NA	NA	NA	NA
WP_003811295.1|1336736_1337234_+	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
WP_010930291.1|1337230_1337758_+	RES family NAD+ phosphorylase	NA	NA	NA	NA	NA
WP_003811298.1|1337891_1338707_+	exported protein	NA	NA	NA	NA	NA
WP_010930292.1|1338719_1339901_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_003811301.1|1339948_1340842_-	phosphatidylserine decarboxylase	NA	NA	NA	NA	NA
WP_010930293.1|1340968_1341439_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930294.1|1341564_1342392_-	DUF3298 domain-containing protein	NA	NA	NA	NA	NA
WP_003811306.1|1342420_1343197_-	lipoate--protein ligase family protein	NA	NA	NA	NA	NA
WP_023852802.1|1343193_1343469_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930295.1|1343483_1343948_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930296.1|1343959_1344661_-	thiol:disulfide oxidoreductase	NA	NA	NA	NA	NA
WP_003811310.1|1344770_1345271_-	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	38.4	4.7e-25
WP_010930297.1|1345353_1346532_-	DUF1501 domain-containing protein	NA	NA	NA	NA	NA
WP_003811313.1|1348159_1348495_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_010930298.1|1348682_1350131_+	CoA transferase	NA	NA	NA	NA	NA
WP_023852799.1|1350188_1350533_+	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	58.4	3.0e-31
WP_003811316.1|1350639_1351179_-	peroxiredoxin	NA	NA	NA	NA	NA
WP_005012067.1|1351271_1352222_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852768.1|1352320_1352728_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247530.1|1352960_1353392_-	BcpO-related WXXGXW repeat protein	NA	NA	NA	NA	NA
WP_010930300.1|1353573_1353978_-	DoxX family protein	NA	NA	NA	NA	NA
WP_010930301.1|1355214_1355538_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247533.1|1355540_1356428_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_003811322.1|1356460_1356886_-	universal stress protein	NA	NA	NA	NA	NA
WP_019247534.1|1356957_1357311_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811324.1|1357550_1358057_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930302.1|1358095_1359427_-	transcriptional regulator PtsJ	NA	NA	NA	NA	NA
WP_003811326.1|1359486_1360302_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_010930303.1|1360298_1361153_+	pyridoxine/pyridoxal/pyridoxamine kinase	NA	NA	NA	NA	NA
WP_010930304.1|1364215_1366759_-	malto-oligosyltrehalose synthase	NA	NA	NA	NA	NA
WP_010930305.1|1368125_1369880_-	malto-oligosyltrehalose trehalohydrolase	NA	NA	NA	NA	NA
WP_010930306.1|1369876_1371997_-	glycogen debranching protein GlgX	NA	NA	NA	NA	NA
WP_010930307.1|1372001_1374197_-	1,4-alpha-glucan branching protein GlgB	NA	NA	NA	NA	NA
WP_010930308.1|1374193_1377535_-	maltose alpha-D-glucosyltransferase	NA	NA	NA	NA	NA
WP_010930208.1|1380337_1381288_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811361.1|1381353_1381533_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247449.1|1381649_1382405_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010930310.1|1382391_1383537_-	DUF3182 family protein	NA	NA	NA	NA	NA
WP_010930208.1|1384444_1385395_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP013891	Bordetella pertussis strain J121 chromosome, complete genome	4103084	1445886	1501374	4103084	protease,transposase	Mollivirus(16.67%)	56	NA	NA
WP_005012067.1|1445886_1446837_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811846.1|1448038_1448485_-	flagellar export protein FliJ	NA	NA	NA	NA	NA
WP_019247562.1|1448477_1449953_-	flagellar protein export ATPase FliI	NA	NA	NA	NA	NA
WP_010930338.1|1449949_1450705_-	flagellar assembly protein FliH	NA	NA	NA	NA	NA
WP_003817203.1|1450697_1451708_-	flagellar motor switch protein FliG	NA	NA	NA	NA	NA
WP_010930339.1|1451697_1453374_-	flagellar basal body M-ring protein FliF	NA	NA	NA	NA	NA
WP_010930340.1|1453686_1454019_+	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA	NA
WP_010930341.1|1454032_1454428_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930342.1|1454437_1454764_-	flagellar biosynthesis protein FlhB	NA	NA	NA	NA	NA
WP_019247563.1|1454760_1455087_-	flagellar hook-length control protein FliK	NA	NA	NA	NA	NA
WP_023994685.1|1455013_1456036_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930343.1|1456032_1456383_-	flagellar protein FliT	NA	NA	NA	NA	NA
WP_010930344.1|1456430_1456859_-	flagellar export chaperone FliS	NA	NA	NA	NA	NA
WP_010930345.1|1456866_1458240_-	flagellar filament capping protein FliD	NA	NA	NA	NA	NA
WP_003817216.1|1458380_1458758_-	flagellar protein FlaG	NA	NA	NA	NA	NA
WP_010930346.1|1459020_1460328_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_023852965.1|1460388_1461219_+	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_003811815.1|1461215_1461704_+	CvpA family protein	NA	NA	NA	NA	NA
WP_003811814.1|1461745_1463266_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	43.7	4.8e-97
WP_003811812.1|1463309_1463786_-	disulfide bond formation protein B	NA	NA	NA	NA	NA
WP_010930348.1|1464589_1467187_-	[protein-PII] uridylyltransferase	NA	NA	NA	NA	NA
WP_003811806.1|1467216_1468038_-	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
WP_003811803.1|1468764_1469514_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
WP_010926570.1|1469697_1470576_+	elongation factor Ts	NA	NA	NA	NA	NA
WP_010930349.1|1470673_1471390_+	UMP kinase	NA	NA	NA	NA	NA
WP_003811796.1|1471404_1471965_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_010930350.1|1472131_1472896_+	di-trans,poly-cis-decaprenylcistransferase	NA	R9W0U9	Flavobacterium_phage	36.1	1.7e-18
WP_010930351.1|1472915_1473773_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003811788.1|1473769_1474969_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_010930352.1|1475008_1476343_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_010930353.1|1476395_1478732_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
WP_003811782.1|1478857_1479421_+	OmpH family outer membrane protein	NA	NA	NA	NA	NA
WP_010930354.1|1479429_1480521_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
WP_003811776.1|1480592_1481048_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA	NA
WP_010930355.1|1481048_1481843_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
WP_010930356.1|1481839_1483021_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
WP_003811770.1|1483007_1483613_+	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	40.2	8.8e-26
WP_003811768.1|1483609_1484383_+	RNA methyltransferase	NA	NA	NA	NA	NA
WP_010930357.1|1484394_1485222_-	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
WP_010930358.1|1485383_1487747_+	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	35.9	2.2e-165
WP_010930359.1|1487814_1488534_-	glutamine amidotransferase	NA	NA	NA	NA	NA
WP_003811761.1|1488657_1489083_+	membrane protein	NA	NA	NA	NA	NA
WP_005012067.1|1489117_1490068_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811759.1|1490185_1491112_+	paraslipin	NA	NA	NA	NA	NA
WP_010930360.1|1491177_1492335_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
WP_003811754.1|1492315_1492783_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
WP_010930800.1|1492930_1493881_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811752.1|1493897_1494332_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_003811750.1|1494321_1494672_+	RnfH family protein	NA	NA	NA	NA	NA
WP_003811748.1|1494868_1496023_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003811746.1|1496019_1497192_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003811743.1|1497239_1498133_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003811741.1|1498178_1498616_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_010930362.1|1498675_1499365_+	VIT family protein	NA	NA	NA	NA	NA
WP_010929577.1|1499374_1500325_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879624.1|1500423_1501374_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP013891	Bordetella pertussis strain J121 chromosome, complete genome	4103084	1596072	1655984	4103084	transposase,tRNA	Streptococcus_virus(12.5%)	50	NA	NA
WP_010930416.1|1596072_1596561_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_019248504.1|1596678_1597257_+	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010930418.1|1597362_1597731_+	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|1597829_1598780_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994932.1|1598786_1599899_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
WP_010930419.1|1600585_1601788_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930420.1|1601991_1604652_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930421.1|1604664_1608069_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_023995689.1|1608736_1610962_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.5	1.2e-43
WP_010930423.1|1611008_1611335_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_010930424.1|1611385_1611994_+	recombination protein RecR	NA	NA	NA	NA	NA
WP_005013747.1|1612092_1613043_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930425.1|1613112_1613877_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446226.1|1613873_1614410_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930427.1|1614576_1615428_-	membrane protein	NA	A0A1I9SA48	Rhodococcus_phage	35.3	7.0e-37
WP_010928449.1|1615487_1616114_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
WP_005012067.1|1616110_1617061_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019249265.1|1617159_1618272_-	DUF1513 domain-containing protein	NA	NA	NA	NA	NA
WP_019248041.1|1618261_1619263_-	imelysin family protein	NA	NA	NA	NA	NA
WP_019247498.1|1619368_1620880_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_023853587.1|1620876_1622181_-	imelysin	NA	NA	NA	NA	NA
WP_010930431.1|1622292_1622853_-	membrane protein	NA	NA	NA	NA	NA
WP_010930432.1|1623120_1623675_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	32.0	1.7e-15
WP_010930433.1|1624130_1624346_-	dodecin domain-containing protein	NA	NA	NA	NA	NA
WP_033446228.1|1624600_1627198_+	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	22.6	1.5e-21
WP_010930435.1|1627194_1628382_+	cupin	NA	NA	NA	NA	NA
WP_010930436.1|1629040_1629655_+	serotype 3 fimbrial subunit	NA	NA	NA	NA	NA
WP_023994740.1|1629743_1630865_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA	NA
WP_033446216.1|1630882_1631788_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_005012067.1|1632680_1633631_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930439.1|1633812_1634565_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
WP_003811112.1|1634633_1635293_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
WP_003811113.1|1635289_1636018_+	glutamine ABC transporter ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	39.3	3.3e-35
WP_010930440.1|1636030_1638310_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	32.1	5.9e-06
WP_010930441.1|1638334_1638538_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_010930442.1|1638579_1639212_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	33.9	2.4e-13
WP_010930443.1|1639347_1640265_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_010930444.1|1640261_1640975_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_003811135.1|1641212_1641983_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003811137.1|1641987_1642587_-	C40 family peptidase	NA	A0A0A8WF62	Clostridium_phage	41.6	1.4e-20
WP_003811138.1|1642831_1644322_+	AMP nucleosidase	NA	NA	NA	NA	NA
WP_010926696.1|1644380_1644665_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003811148.1|1645230_1646157_-	YicC family protein	NA	NA	NA	NA	NA
WP_003811149.1|1646293_1647034_+	ribonuclease PH	NA	NA	NA	NA	NA
WP_010930446.1|1647200_1648577_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003811152.1|1648758_1649664_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930448.1|1651315_1653118_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_003811159.1|1653235_1653886_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA	NA
WP_005013747.1|1653984_1654935_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012808.1|1655033_1655984_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
NZ_CP013891	Bordetella pertussis strain J121 chromosome, complete genome	4103084	1701156	1756747	4103084	transposase	Brazilian_cedratvirus(25.0%)	47	NA	NA
WP_005013747.1|1701156_1702107_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930486.1|1702165_1702939_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486074.1|1702931_1704488_+	LTA synthase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1704484_1705435_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810741.1|1706761_1707364_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810743.1|1707603_1708305_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003816696.1|1708298_1709081_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_005012808.1|1709265_1710216_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930483.1|1710314_1711052_-	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_010926609.1|1711241_1712000_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930482.1|1712046_1713036_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930481.1|1713213_1714182_-	transporter	NA	NA	NA	NA	NA
WP_010930480.1|1715721_1716690_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930479.1|1716698_1717640_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|1718113_1719124_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930477.1|1719114_1720629_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930476.1|1720625_1721972_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930475.1|1721974_1723009_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_023852967.1|1723058_1724684_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_005012067.1|1725236_1726187_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930487.1|1726291_1727239_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247865.1|1727292_1729107_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_010930489.1|1729099_1729774_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_023995112.1|1729903_1732978_+	autotransporter SphB2	NA	NA	NA	NA	NA
WP_019247905.1|1732991_1733291_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930492.1|1733605_1734229_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_010930493.1|1734472_1735342_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010930494.1|1735319_1736264_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247909.1|1736349_1737276_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247910.1|1737388_1738168_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930497.1|1738158_1739355_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010930498.1|1739385_1740336_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_010930499.1|1740557_1741247_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930500.1|1741311_1742067_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930501.1|1742118_1743111_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930502.1|1743120_1744074_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811538.1|1744189_1745152_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019249376.1|1746553_1746982_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931070.1|1746978_1747929_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930503.1|1748222_1748945_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_010930504.1|1749383_1750571_-	MFS transporter	NA	NA	NA	NA	NA
WP_010930505.1|1750574_1750925_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930506.1|1752674_1753646_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930507.1|1753659_1754373_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930508.1|1754377_1755295_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811452.1|1755401_1755698_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929588.1|1755796_1756747_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
NZ_CP013891	Bordetella pertussis strain J121 chromosome, complete genome	4103084	1989510	2059162	4103084	transposase,tRNA	Staphylococcus_phage(16.67%)	55	NA	NA
WP_003818515.1|1989510_1992168_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	39.0	3.3e-173
WP_010930709.1|1992245_1993448_-	MFS transporter	NA	NA	NA	NA	NA
WP_003810260.1|1993444_1993957_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247822.1|1994079_1994517_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931070.1|1994793_1995744_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_062826579.1|1995842_1996793_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853105.1|1996956_1998852_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.5	2.3e-19
WP_010930711.1|1998965_1999133_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_003810297.1|1999196_1999433_-	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_033446265.1|1999801_2000953_-	multidrug effflux MFS transporter	NA	NA	NA	NA	NA
WP_010929591.1|2002516_2003467_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818523.1|2003918_2004920_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810306.1|2005092_2005950_+	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA	NA
WP_003810308.1|2005946_2007209_+	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.8e-28
WP_003818524.1|2007309_2007684_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
WP_010930713.1|2007756_2008944_+	acetyl-CoA C-acyltransferase family protein	NA	NA	NA	NA	NA
WP_010930714.1|2009028_2009799_+	spermidine synthase	NA	NA	NA	NA	NA
WP_010930715.1|2009912_2010677_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930716.1|2010627_2011929_+	malonyl-CoA decarboxylase	NA	NA	NA	NA	NA
WP_010930717.1|2011925_2012732_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_003818532.1|2014476_2015448_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003818533.1|2015604_2016117_+	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	52.3	1.8e-43
WP_010930718.1|2016275_2017250_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930719.1|2018250_2019045_+	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.7	5.1e-05
WP_003818535.1|2019070_2019877_-	TOBE domain-containing protein	NA	NA	NA	NA	NA
WP_003810329.1|2019987_2020578_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_010930720.1|2020588_2021767_+	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_010930721.1|2021869_2022244_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_019248531.1|2022496_2023828_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_019247651.1|2023894_2027125_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_003810344.1|2028615_2029362_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_010930724.1|2029446_2029908_+	holo-ACP synthase	NA	NA	NA	NA	NA
WP_010930725.1|2029945_2031004_+	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_010930726.1|2030966_2032796_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_003810356.1|2032835_2033408_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930727.1|2034832_2035654_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	4.1e-42
WP_010930728.1|2035972_2037295_+	isocitrate lyase	NA	NA	NA	NA	NA
WP_010930729.1|2037654_2038290_+	membrane protein	NA	NA	NA	NA	NA
WP_010930730.1|2038249_2039200_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930731.1|2040070_2040943_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930732.1|2041020_2042160_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930733.1|2042518_2043775_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_003816691.1|2043780_2044308_+	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_003816690.1|2044312_2045131_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003816687.1|2045130_2045853_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930735.1|2045874_2046189_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930736.1|2046206_2047355_+	CoA transferase	NA	NA	NA	NA	NA
WP_010930737.1|2047385_2048261_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816680.1|2048257_2049577_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_014486081.1|2049649_2050846_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_010930739.1|2050856_2052344_-	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_010930740.1|2054938_2055838_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852887.1|2055975_2056941_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005015810.1|2057039_2057990_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2058211_2059162_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
NZ_CP013891	Bordetella pertussis strain J121 chromosome, complete genome	4103084	2070658	2120054	4103084	transposase	Erysipelothrix_phage(16.67%)	45	NA	NA
WP_005013747.1|2070658_2071609_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812172.1|2072746_2073043_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247707.1|2073217_2074570_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	2.9e-45
WP_010930153.1|2074712_2075729_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930748.1|2077708_2078722_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_010930749.1|2078808_2079714_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812179.1|2079870_2080215_+	exported protein	NA	NA	NA	NA	NA
WP_010930750.1|2080372_2080831_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_010930751.1|2080844_2083061_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_003812183.1|2083057_2084119_+	XdhC family protein	NA	NA	NA	NA	NA
WP_010930752.1|2084147_2085122_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930753.1|2085073_2085892_-	hypothetical protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	28.8	2.3e-16
WP_003812191.1|2085904_2086513_-	peptidase S16	NA	NA	NA	NA	NA
WP_010930754.1|2086687_2087083_+	VOC family protein	NA	NA	NA	NA	NA
WP_010930755.1|2087101_2088541_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	37.4	7.4e-55
WP_003812199.1|2088569_2088917_+	GFA family protein	NA	NA	NA	NA	NA
WP_010929577.1|2088935_2089886_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2090538_2091489_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997035.1|2091572_2093390_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
WP_019247659.1|2093463_2094111_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930758.1|2094123_2095053_-	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_014905663.1|2095222_2095687_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003816977.1|2095934_2096615_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003816975.1|2096663_2098355_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
WP_010930760.1|2098370_2098922_-	SRPBCC family protein	NA	NA	NA	NA	NA
WP_003816971.1|2098918_2099290_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930761.1|2099402_2100239_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_029443822.1|2100249_2100774_-	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_003812228.1|2100871_2101051_+	DUF3008 family protein	NA	NA	NA	NA	NA
WP_010930763.1|2101180_2102155_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003816964.1|2102285_2102642_+	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
WP_010930764.1|2102631_2103507_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_010930765.1|2103605_2104490_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930766.1|2104511_2105807_-	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_003816959.1|2106755_2107406_+	flavodoxin family protein	NA	NA	NA	NA	NA
WP_010930767.1|2107493_2109014_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930768.1|2109271_2111137_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|2112182_2113133_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268681.1|2113150_2113291_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930769.1|2114105_2114465_-	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_010930770.1|2114452_2115889_-	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930771.1|2115885_2116539_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930772.1|2116535_2117729_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930773.1|2117832_2119107_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_005012067.1|2119103_2120054_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
NZ_CP013891	Bordetella pertussis strain J121 chromosome, complete genome	4103084	2131258	2199634	4103084	protease,transposase,tRNA	Klosneuvirus(22.22%)	59	NA	NA
WP_005013747.1|2131258_2132209_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122784.1|2132168_2132582_-	transcriptional regulator	NA	A0A222YXG1	Escherichia_phage	59.0	3.8e-36
WP_003816708.1|2132866_2133166_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930783.1|2133575_2135858_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	30.1	3.2e-36
WP_124740709.1|2136323_2136518_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930784.1|2136543_2138574_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	41.9	1.0e-65
WP_006218592.1|2138593_2138806_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_003810720.1|2139083_2139623_-	phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_023852902.1|2139736_2141032_-	adenylosuccinate synthase	NA	A0A160ER07	Powai_lake_megavirus	33.5	3.0e-63
WP_010930786.1|2141108_2142266_-	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
WP_010930787.1|2142449_2143349_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_010930788.1|2143367_2144672_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930789.1|2144637_2145744_-	GTPase HflX	NA	NA	NA	NA	NA
WP_003810707.1|2145831_2146068_-	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930790.1|2146206_2147277_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810703.1|2147280_2148636_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_023852925.1|2148662_2149820_-	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_010930791.1|2149825_2150464_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_033446258.1|2150465_2151761_-|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_033446257.1|2151810_2153097_-	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_003810693.1|2153112_2153619_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_004568542.1|2153615_2154764_-	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_003810689.1|2154791_2155217_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
WP_010930794.1|2155539_2158422_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
WP_023852900.1|2158514_2159270_-	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_010930796.1|2160035_2161385_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_076879566.1|2161483_2162434_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930048.1|2162532_2163483_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930594.1|2163556_2164030_+	RidA family protein	NA	NA	NA	NA	NA
WP_010930593.1|2164055_2165264_+	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_003816734.1|2165260_2166034_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_014905757.1|2166033_2166657_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_010926757.1|2166822_2167083_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_010930591.1|2167386_2167968_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004568544.1|2168034_2168289_-	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_010930590.1|2168275_2170900_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
WP_010930589.1|2170971_2171790_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810661.1|2171786_2172392_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_010930588.1|2172429_2173563_-	general secretion pathway protein	NA	NA	NA	NA	NA
WP_010930587.1|2175278_2175653_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930586.1|2175750_2177025_-	type 4b pilus protein PilO2	NA	NA	NA	NA	NA
WP_010930585.1|2177028_2178606_-	lipoprotein	NA	NA	NA	NA	NA
WP_010930584.1|2179512_2180868_-	amidase	NA	NA	NA	NA	NA
WP_010930583.1|2180864_2182499_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	8.2e-18
WP_010930582.1|2182491_2183322_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003810637.1|2183339_2184284_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930581.1|2184336_2185911_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247553.1|2185958_2186318_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247554.1|2186310_2186631_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247555.1|2186746_2187679_+	acyclic terpene utilization AtuA family protein	NA	NA	NA	NA	NA
WP_003818676.1|2187781_2188738_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810623.1|2188887_2190225_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010930578.1|2190229_2191486_-	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_010930577.1|2191681_2192728_-	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
WP_003818672.1|2192785_2193154_-	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
WP_010930576.1|2193284_2194157_-	MOSC domain-containing protein	NA	NA	NA	NA	NA
WP_003818670.1|2194233_2195136_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930574.1|2196192_2197410_-	four-carbon acid sugar kinase family protein	NA	NA	NA	NA	NA
WP_010929577.1|2198683_2199634_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NZ_CP013891	Bordetella pertussis strain J121 chromosome, complete genome	4103084	2252968	2310247	4103084	transposase,tRNA	Synechococcus_phage(14.29%)	49	NA	NA
WP_005012067.1|2252968_2253919_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879626.1|2254017_2256012_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.3	4.4e-21
WP_010930543.1|2256071_2257037_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_010930542.1|2257026_2259888_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
WP_010930541.1|2259890_2260397_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_010930540.1|2260501_2261710_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	30.0	3.8e-36
WP_033446178.1|2261711_2262650_-	membrane protein	NA	NA	NA	NA	NA
WP_010930538.1|2262811_2263285_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|2263281_2264232_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566334.1|2264342_2264783_-	DUF937 domain-containing protein	NA	NA	NA	NA	NA
WP_010930537.1|2264911_2266141_-	lytic murein transglycosylase	NA	NA	NA	NA	NA
WP_004566336.1|2266179_2267001_-	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_029443743.1|2267054_2268206_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930535.1|2268297_2268786_-	DUF1854 domain-containing protein	NA	NA	NA	NA	NA
WP_019247811.1|2271336_2273886_+	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_010930533.1|2273956_2276530_+	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_003813568.1|2276795_2276996_+	CsbD family protein	NA	NA	NA	NA	NA
WP_003813570.1|2277027_2277189_+	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
WP_003813572.1|2277246_2277585_+	BON domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|2277733_2278684_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247882.1|2279458_2280127_+	arylesterase	NA	NA	NA	NA	NA
WP_010930531.1|2280108_2282064_-	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_004568486.1|2282306_2283056_+	glycerophosphodiester phosphodiesterase	NA	A0A2H4PGQ5	Escherichia_phage	27.8	1.5e-14
WP_003816518.1|2283068_2283932_+	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
WP_003816520.1|2283935_2285351_-	dihydrolipoyl dehydrogenase	NA	NA	NA	NA	NA
WP_010930530.1|2285484_2286213_-	redoxin family protein	NA	A0A1D8KSL1	Synechococcus_phage	56.8	9.6e-43
WP_003811035.1|2286351_2286552_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_003816523.1|2286727_2287126_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003816525.1|2287149_2288550_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	26.5	7.3e-31
WP_010930529.1|2288668_2289421_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003816527.1|2289709_2290387_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248494.1|2290413_2291193_-	3'-5' exonuclease	NA	NA	NA	NA	NA
WP_003811022.1|2291189_2292074_-	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A292GJG6	Xanthomonas_phage	49.5	4.6e-15
WP_019247478.1|2292091_2292871_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.9	4.8e-32
WP_010930526.1|2292855_2293614_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.2	1.4e-68
WP_023852762.1|2293751_2294387_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_010929632.1|2294654_2295671_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930524.1|2295768_2296809_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	51.3	6.1e-91
WP_003811011.1|2296943_2298236_+	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	36.0	1.7e-66
WP_003811007.1|2299595_2299979_+	thioredoxin family protein	NA	V9SJ74	Achromobacter_phage	25.8	8.1e-09
WP_010930523.1|2299996_2300584_-	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	35.8	4.7e-16
WP_010930522.1|2300621_2301572_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930801.1|2301670_2302231_-	diaminobutyrate acetyltransferase	NA	NA	NA	NA	NA
WP_010930802.1|2302227_2302773_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003818661.1|2302968_2303997_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930803.1|2304037_2305378_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	22.8	8.8e-18
WP_003818658.1|2305486_2306491_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010930804.1|2306597_2309198_+	TRAP transporter fused permease subunit	NA	NA	NA	NA	NA
WP_010930522.1|2309296_2310247_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
NZ_CP013891	Bordetella pertussis strain J121 chromosome, complete genome	4103084	2683875	2724544	4103084	transposase,tRNA	Salmonella_phage(33.33%)	42	NA	NA
WP_010929591.1|2683875_2684826_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004567479.1|2684936_2685119_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931004.1|2685218_2685815_-	lipoprotein	NA	NA	NA	NA	NA
WP_010931005.1|2685998_2687090_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003812822.1|2687589_2688000_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852697.1|2688058_2688388_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	42.2	2.7e-13
WP_010931007.1|2688405_2690823_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_010926359.1|2690835_2691858_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	38.6	1.0e-26
WP_003812832.1|2691932_2692292_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_003812834.1|2692307_2692505_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_010929584.1|2692840_2693791_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816756.1|2693985_2694435_+	dUTP diphosphatase	NA	S4TNT3	Salmonella_phage	67.2	3.7e-45
WP_005012808.1|2694431_2695382_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931008.1|2695492_2696941_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_023853496.1|2697055_2697301_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2697440_2698391_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820420.1|2698635_2699349_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_019247724.1|2699471_2699699_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003816758.1|2699993_2700632_-	DedA family protein	NA	NA	NA	NA	NA
WP_010931011.1|2700740_2701775_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_010929591.1|2701771_2702722_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931012.1|2703137_2703662_-	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
WP_004567322.1|2703665_2703935_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931013.1|2704133_2705195_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931014.1|2705278_2706913_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
WP_010931015.1|2706914_2707718_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931016.1|2707746_2708706_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931017.1|2708709_2710224_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248147.1|2710260_2711265_-	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931018.1|2711696_2712167_-	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
WP_010931019.1|2712202_2712814_-	LysE family translocator	NA	NA	NA	NA	NA
WP_010931020.1|2712844_2713468_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_010931021.1|2713548_2715081_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_023853282.1|2715115_2716333_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931023.1|2716400_2717432_-	alcohol dehydrogenase catalytic domain-containing protein	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
WP_010931024.1|2717428_2718598_-	NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_010931025.1|2718591_2719272_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931026.1|2719433_2720276_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931027.1|2720438_2721410_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931028.1|2721581_2722460_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931029.1|2722482_2723553_-	FUSC family protein	NA	NA	NA	NA	NA
WP_005013747.1|2723593_2724544_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NZ_CP013891	Bordetella pertussis strain J121 chromosome, complete genome	4103084	2780008	2922829	4103084	protease,transposase,tRNA	Agrobacterium_phage(14.29%)	109	NA	NA
WP_003810909.1|2780008_2780425_-|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931061.1|2780535_2781168_+	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA	NA
WP_010931062.1|2781196_2781640_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_003810897.1|2781661_2782753_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931063.1|2782807_2783608_-	aldolase	NA	NA	NA	NA	NA
WP_010931064.1|2783743_2784364_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931065.1|2784503_2784977_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|2786116_2787067_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931066.1|2787063_2794725_-	filamentous hemagglutinin N-terminal domain-containing protein	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
WP_010931067.1|2794965_2799012_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
WP_003816847.1|2799324_2799906_+	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010931068.1|2799902_2801201_+	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010931069.1|2801280_2802309_+	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010927663.1|2803515_2804466_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931071.1|2804782_2805388_+	fimbrial protein	NA	NA	NA	NA	NA
WP_010931072.1|2805441_2806755_-	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
WP_003813284.1|2806829_2807300_-	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA	NA
WP_010931073.1|2807299_2808088_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
WP_010931074.1|2808098_2809751_-	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA	NA
WP_010929591.1|2809838_2810789_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931075.1|2811950_2812457_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA	NA
WP_003813293.1|2812453_2813218_-	phenylacetate-CoA oxygenase subunit PaaC	NA	NA	NA	NA	NA
WP_010931076.1|2813233_2813518_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA	NA
WP_003813298.1|2813582_2814572_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
WP_010931077.1|2814743_2815673_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA	NA
WP_003813302.1|2815644_2816331_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
WP_003813303.1|2816364_2816910_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	37.7	2.1e-26
WP_003813306.1|2816954_2818220_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003813309.1|2818216_2819119_+	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA	NA
WP_019247679.1|2820300_2821245_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931079.1|2821339_2822857_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931080.1|2822898_2824527_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_003811986.1|2824634_2825516_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931081.1|2828628_2829003_+	endonuclease	NA	F4YXR7	Roseobacter_phage	54.4	2.1e-25
WP_003812004.1|2829027_2829366_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931082.1|2829409_2831044_-	NAD+ synthase	NA	A0A2L0UZF5	Agrobacterium_phage	36.6	8.3e-87
WP_010931083.1|2831082_2832429_-	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_003812010.1|2832536_2833958_+	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_010931084.1|2834027_2834612_-	nitroreductase	NA	NA	NA	NA	NA
WP_005012067.1|2834714_2835665_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931085.1|2835799_2836906_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010931086.1|2836916_2838014_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
WP_010931087.1|2838158_2839364_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_010931088.1|2839370_2839892_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA	NA
WP_023853551.1|2839888_2840371_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
WP_003819740.1|2840376_2840628_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
WP_003819741.1|2840608_2841094_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
WP_010931090.1|2841229_2844691_+	DUF748 domain-containing protein	NA	NA	NA	NA	NA
WP_010931091.1|2844708_2845593_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
WP_010931092.1|2845602_2846034_-	lipoprotein	NA	NA	NA	NA	NA
WP_003809348.1|2846280_2846784_+	peroxiredoxin	NA	M1I839	Pelagibacter_phage	44.1	1.8e-24
WP_010931094.1|2846861_2848262_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931095.1|2848336_2849212_-	membrane protein	NA	NA	NA	NA	NA
WP_023853546.1|2849208_2850216_-	biotin synthase BioB	NA	NA	NA	NA	NA
WP_010931097.1|2850683_2850989_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003819753.1|2851079_2851670_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930525.1|2851860_2852877_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010931098.1|2853068_2855405_-	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.8	3.2e-124
WP_003812014.1|2855487_2855922_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_023995489.1|2856020_2856971_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2857069_2858020_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931099.1|2858016_2858811_-	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_010931100.1|2858842_2859547_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931101.1|2859621_2860422_-	SURF1 family protein	NA	NA	NA	NA	NA
WP_003809276.1|2860418_2860826_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_003819722.1|2860822_2861464_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_010931102.1|2861456_2863457_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_010931103.1|2864717_2866049_+	MFS transporter	NA	NA	NA	NA	NA
WP_005012067.1|2866045_2866996_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931105.1|2868702_2868969_-	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_003812839.1|2869676_2870015_+	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_077069211.1|2871343_2874328_-	autotransporter BapC	NA	NA	NA	NA	NA
WP_010931107.1|2874566_2875169_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931108.1|2875265_2876555_+	MFS transporter	NA	NA	NA	NA	NA
WP_003812846.1|2876612_2877344_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931109.1|2877340_2878144_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812851.1|2878140_2879229_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|2879225_2880155_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812857.1|2880303_2881449_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930800.1|2881470_2882421_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931110.1|2882751_2886573_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010931111.1|2886729_2887398_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_014905522.1|2887402_2889076_-	MCE family protein	NA	NA	NA	NA	NA
WP_003820402.1|2889094_2890414_-	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_010931114.1|2890418_2892734_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.1e-164
WP_010931115.1|2892789_2894958_-	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_023853340.1|2894954_2900135_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_003820400.1|2900233_2900548_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_003812875.1|2900775_2901021_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820399.1|2901115_2901634_+	hypothetical protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_010931117.1|2901733_2902939_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_019247560.1|2903054_2904452_-	chloride channel protein	NA	NA	NA	NA	NA
WP_010931119.1|2904568_2905147_-	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_010931120.1|2905219_2906611_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_005012067.1|2906778_2907729_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812889.1|2908009_2908630_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_010931122.1|2908626_2909040_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_010931123.1|2909036_2910080_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_003812895.1|2910135_2910324_+	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931124.1|2910333_2911098_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_010931125.1|2911188_2911845_+	adenylate kinase	NA	NA	NA	NA	NA
WP_010931126.1|2911936_2912695_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931127.1|2912720_2914322_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931128.1|2914522_2915527_+	DUF4880 domain-containing protein	NA	NA	NA	NA	NA
WP_003812908.1|2915627_2915891_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931129.1|2916008_2916785_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_005012067.1|2917375_2918326_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931130.1|2920709_2921822_-	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_010929584.1|2921878_2922829_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
NZ_CP013891	Bordetella pertussis strain J121 chromosome, complete genome	4103084	2953215	2996906	4103084	transposase	Planktothrix_phage(33.33%)	39	NA	NA
WP_005012067.1|2953215_2954166_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852715.1|2954286_2955183_-	inositol monophosphatase	NA	NA	NA	NA	NA
WP_003814547.1|2957460_2959686_+	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_003814544.1|2959850_2960939_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_019247918.1|2960895_2961549_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931144.1|2961596_2962394_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930176.1|2962925_2963876_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994659.1|2963956_2965105_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|2965161_2966112_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814535.1|2966210_2966516_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_003820797.1|2966544_2966979_-	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_010931147.1|2966980_2968225_-	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003820799.1|2968221_2968932_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_033446288.1|2968946_2969858_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931149.1|2970220_2970625_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247890.1|2970621_2971080_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247891.1|2971086_2971995_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931150.1|2971991_2972858_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_003814524.1|2972844_2973672_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003820806.1|2973682_2974810_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_023852748.1|2975887_2977126_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931152.1|2977167_2978430_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010931153.1|2978436_2979189_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_019248355.1|2979240_2979426_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003820813.1|2979701_2980166_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_003820814.1|2980197_2980857_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_010931154.1|2981001_2983110_+	AsmA family protein	NA	NA	NA	NA	NA
WP_023852714.1|2983106_2984057_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931155.1|2984160_2984781_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003820818.1|2984884_2985625_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019248356.1|2986759_2987884_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247402.1|2987929_2988298_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2988539_2989490_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247492.1|2990525_2991068_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|2991453_2992404_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931157.1|2992400_2993309_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815281.1|2993435_2994272_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
WP_010931158.1|2994784_2995894_+	porin	NA	NA	NA	NA	NA
WP_005012067.1|2995955_2996906_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
NZ_CP013891	Bordetella pertussis strain J121 chromosome, complete genome	4103084	3377900	3431641	4103084	transposase	Staphylococcus_phage(33.33%)	48	NA	NA
WP_077069052.1|3377900_3378851_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931336.1|3379255_3379900_-	urease accessory protein UreG	NA	NA	NA	NA	NA
WP_019247677.1|3379924_3380509_-	urease accessory protein UreF	NA	NA	NA	NA	NA
WP_014905506.1|3380609_3381227_-	urease accessory protein UreE	NA	NA	NA	NA	NA
WP_010931337.1|3381229_3382945_-	urease subunit alpha	NA	NA	NA	NA	NA
WP_010931338.1|3382941_3383250_-	urease subunit beta	NA	NA	NA	NA	NA
WP_003814828.1|3383266_3383884_-	HupE/UreJ family protein	NA	NA	NA	NA	NA
WP_010931340.1|3383928_3384231_-	urease subunit gamma	NA	NA	NA	NA	NA
WP_003814832.1|3384331_3385186_-	urease accessory protein UreD	NA	NA	NA	NA	NA
WP_124740609.1|3385373_3385598_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929281.1|3385767_3386040_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_010929282.1|3386457_3386865_-	GFA family protein	NA	NA	NA	NA	NA
WP_010931341.1|3387234_3388029_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010927102.1|3388129_3389365_+	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003814852.1|3389433_3390450_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931342.1|3390461_3391838_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003814856.1|3391834_3393031_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814858.1|3393027_3394566_-	SpoVR family protein	NA	NA	NA	NA	NA
WP_010931343.1|3394562_3395822_-	YeaH/YhbH family protein	NA	NA	NA	NA	NA
WP_005012067.1|3397762_3398713_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931344.1|3399479_3400574_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247312.1|3400566_3401901_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_003808193.1|3401854_3402538_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003808195.1|3402563_3403727_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_004566224.1|3403723_3404725_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931346.1|3404724_3405597_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931347.1|3405593_3406343_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931348.1|3406339_3407131_-	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931349.1|3407127_3408267_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_047122778.1|3408542_3409328_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486103.1|3409361_3410144_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_010931351.1|3410147_3410537_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931352.1|3411676_3412540_+	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931353.1|3412575_3413664_+	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_010931070.1|3413660_3414611_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247959.1|3414964_3417943_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003818344.1|3418869_3419748_+	fatty acid desaturase	NA	NA	NA	NA	NA
WP_005013747.1|3421696_3422647_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931354.1|3422643_3423111_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_010931355.1|3423153_3423924_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_010927090.1|3423944_3424745_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931356.1|3424755_3426165_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_003814739.1|3426259_3427045_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931561.1|3427284_3428301_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814742.1|3428408_3428801_-	OsmC family protein	NA	NA	NA	NA	NA
WP_010931357.1|3428938_3429619_+	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_023994844.1|3429623_3430595_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930179.1|3430690_3431641_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 27
NZ_CP013891	Bordetella pertussis strain J121 chromosome, complete genome	4103084	3437796	3497096	4103084	transposase,tRNA	Acinetobacter_phage(27.27%)	47	NA	NA
WP_003820957.1|3437796_3439560_+|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
WP_010931362.1|3439671_3440550_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003814250.1|3440662_3441478_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_003814252.1|3441481_3441733_+	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_010929632.1|3441817_3442834_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814254.1|3443164_3443386_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_019247693.1|3445746_3446664_-	DMT family transporter	NA	NA	NA	NA	NA
WP_019247692.1|3447161_3448370_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931365.1|3448449_3450021_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814275.1|3450138_3451074_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_003814277.1|3451262_3452207_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
WP_003814283.1|3452774_3458492_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
WP_010931367.1|3458497_3459625_+	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
WP_003814287.1|3459680_3460307_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|3460578_3461595_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010927020.1|3461690_3462401_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931368.1|3462397_3463387_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931369.1|3463482_3465114_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931370.1|3465116_3465854_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247745.1|3466009_3466882_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_023852703.1|3467231_3468371_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814300.1|3468367_3469027_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_003814302.1|3469098_3469731_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_010931372.1|3469760_3470279_+	flavin reductase family protein	NA	NA	NA	NA	NA
WP_010931373.1|3470289_3471399_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003814312.1|3471445_3472300_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931374.1|3472301_3473204_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929969.1|3474426_3475377_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997720.1|3477133_3478123_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931375.1|3478298_3479087_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_003817833.1|3479083_3480115_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_003815390.1|3480133_3480697_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_010931376.1|3480752_3482273_-	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_010931377.1|3482536_3483241_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_023852620.1|3483248_3483977_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_003815381.1|3484091_3484466_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003815379.1|3484508_3485798_+	murein transglycosylase A	NA	NA	NA	NA	NA
WP_010931378.1|3485794_3486964_+	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_010931379.1|3486960_3487800_+	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931380.1|3487859_3488795_+	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_005012067.1|3488807_3489758_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931381.1|3489856_3490819_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_003817821.1|3490850_3491210_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931382.1|3491334_3492237_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_010931383.1|3492238_3494011_-	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_003815367.1|3494045_3494822_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_023852617.1|3496145_3497096_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 28
NZ_CP013891	Bordetella pertussis strain J121 chromosome, complete genome	4103084	3512034	3570107	4103084	transposase,tRNA	Planktothrix_phage(12.5%)	47	NA	NA
WP_005012808.1|3512034_3512985_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931392.1|3513113_3514247_-	M20 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931393.1|3514290_3515196_-	hydrolase	NA	NA	NA	NA	NA
WP_023852622.1|3515198_3516899_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	1.0e-15
WP_010931394.1|3516895_3517816_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003817805.1|3517823_3518801_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931395.1|3518859_3519894_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003815317.1|3521868_3522105_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931396.1|3522231_3523095_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_003815315.1|3523183_3524005_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003815313.1|3524084_3524822_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931397.1|3524818_3525811_-	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_010931398.1|3525963_3526587_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931399.1|3526631_3527780_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931400.1|3530103_3531054_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486105.1|3531394_3532345_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879634.1|3532443_3533394_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443756.1|3533690_3534188_+	cupredoxin family protein	NA	NA	NA	NA	NA
WP_010931403.1|3534230_3536006_+	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
WP_010931404.1|3536013_3536880_+	copper resistance protein B	NA	NA	NA	NA	NA
WP_019249391.1|3536886_3537621_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931406.1|3538790_3539585_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815296.1|3539874_3540465_+	cysteine dioxygenase	NA	NA	NA	NA	NA
WP_010931407.1|3540498_3541827_-	amidase	NA	NA	NA	NA	NA
WP_010931408.1|3541901_3543047_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014905478.1|3543158_3544157_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446233.1|3544119_3544554_+	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
WP_010929974.1|3546070_3546955_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929973.1|3546951_3548157_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010929972.1|3548153_3549014_-	endonuclease	NA	NA	NA	NA	NA
WP_003807038.1|3549126_3550917_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
WP_033446243.1|3550957_3551602_-	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	8.5e-11
WP_010929971.1|3551623_3551932_-	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929970.1|3552097_3553384_-	membrane protein	NA	NA	NA	NA	NA
WP_010929969.1|3554817_3555768_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929968.1|3557719_3558934_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_003815171.1|3559039_3560029_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
WP_003815172.1|3560025_3560634_+	HAD-IIIA family hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
WP_010929967.1|3560646_3561276_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_003815175.1|3561272_3561893_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_003815177.1|3561924_3562716_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
WP_010929966.1|3563567_3564023_+	PTS transporter subunit EIIA	NA	NA	NA	NA	NA
WP_010929965.1|3564041_3564968_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_010929964.1|3565021_3566308_-	cytochrome c	NA	NA	NA	NA	NA
WP_003815183.1|3567238_3568111_+	RNase adapter RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
WP_010929963.1|3568107_3569058_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
WP_005012067.1|3569156_3570107_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
