assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001997295.1_ASM199729v1	NZ_CP019605	Tessaracoccus flavus strain RP1 chromosome, complete genome	1	22453-22638	1	CRISPRCasFinder	no		DEDDh,DinG,cas3,WYL,csa3	Orphan	GGAGTTACCGCTGATCGTCGAGTTGACGAT	30	0	0	NA	NA	NA	2	2	Orphan	DEDDh,DinG,cas3,WYL,csa3	NA|149aa|up_9|NZ_CP019605.1_15371_15818_-,NA|77aa|up_5|NZ_CP019605.1_17763_17994_+,NA|145aa|up_2|NZ_CP019605.1_20037_20472_+,NA|131aa|down_0|NZ_CP019605.1_25397_25790_-,NA|121aa|down_1|NZ_CP019605.1_26068_26431_-,NA|93aa|down_2|NZ_CP019605.1_26691_26970_-,NA|76aa|down_3|NZ_CP019605.1_26966_27194_-,NA|181aa|down_5|NZ_CP019605.1_27871_28414_+	NA|149aa|up_9|NZ_CP019605.1_15371_15818_-	NA	NA|205aa|up_8|NZ_CP019605.1_15931_16546_+	cd06259, YdcF-like, YdcF-like	NA|149aa|up_7|NZ_CP019605.1_16585_17032_+	PRK09256, PRK09256, aminoacyl-tRNA hydrolase	NA|177aa|up_6|NZ_CP019605.1_17041_17572_+	PRK00431, PRK00431, ADP-ribose-binding protein	NA|77aa|up_5|NZ_CP019605.1_17763_17994_+	NA	NA|390aa|up_4|NZ_CP019605.1_18011_19181_-	TIGR01426, Glycosyl_transferase, glycosyltransferase, MGT family	NA|225aa|up_3|NZ_CP019605.1_19267_19942_-	pfam01555, N6_N4_Mtase, DNA methylase	NA|145aa|up_2|NZ_CP019605.1_20037_20472_+	NA	NA|112aa|up_1|NZ_CP019605.1_20468_20804_+	pfam13601, HTH_34, Winged helix DNA-binding domain	NA|213aa|up_0|NZ_CP019605.1_20826_21465_+	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown]	NA|131aa|down_0|NZ_CP019605.1_25397_25790_-	NA	NA|121aa|down_1|NZ_CP019605.1_26068_26431_-	NA	NA|93aa|down_2|NZ_CP019605.1_26691_26970_-	NA	NA|76aa|down_3|NZ_CP019605.1_26966_27194_-	NA	NA|213aa|down_4|NZ_CP019605.1_27216_27855_+	PRK08224, ligC, ATP-dependent DNA ligase; Reviewed	NA|181aa|down_5|NZ_CP019605.1_27871_28414_+	NA	NA|710aa|down_6|NZ_CP019605.1_29107_31237_+	PRK08224, ligC, ATP-dependent DNA ligase; Reviewed	NA|247aa|down_7|NZ_CP019605.1_31284_32025_+	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|42aa|down_8|NZ_CP019605.1_32107_32233_+	pfam18029, Glyoxalase_6, Glyoxalase-like domain	NA|200aa|down_9|NZ_CP019605.1_32234_32834_-	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only]
GCF_001997295.1_ASM199729v1	NZ_CP019605	Tessaracoccus flavus strain RP1 chromosome, complete genome	2	798976-799116	1	CRT	no		DEDDh,DinG,cas3,WYL,csa3	Orphan	CTCTTCCTTGGGCTCGGG	18	3	3	798994-799023|799042-799059|799078-799098	NZ_CP019605.1_798970-798999|NZ_CP019605.1_798970-798987|NZ_CP019605.1_2196588-2196608	NA	3	3	Orphan	DEDDh,DinG,cas3,WYL,csa3	NA|133aa|up_9|NZ_CP019605.1_785069_785468_-,NA|100aa|down_1|NZ_CP019605.1_801327_801627_+,NA|110aa|down_3|NZ_CP019605.1_803157_803487_+,NA|69aa|down_4|NZ_CP019605.1_803431_803638_-	NA|133aa|up_9|NZ_CP019605.1_785069_785468_-	NA	NA|726aa|up_8|NZ_CP019605.1_786790_788968_-	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only]	NA|474aa|up_7|NZ_CP019605.1_789175_790597_-	TIGR00653, Glutamine_synthetase, glutamine synthetase, type I	NA|451aa|up_6|NZ_CP019605.1_790790_792143_-	pfam00375, SDF, Sodium:dicarboxylate symporter family	NA|143aa|up_5|NZ_CP019605.1_792387_792816_+	pfam06271, RDD, RDD family	NA|586aa|up_4|NZ_CP019605.1_792847_794605_-	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|252aa|up_3|NZ_CP019605.1_794611_795367_-	pfam13829, DUF4191, Domain of unknown function (DUF4191)	NA|313aa|up_2|NZ_CP019605.1_795372_796311_-	PRK05481, PRK05481, lipoyl synthase; Provisional	NA|220aa|up_1|NZ_CP019605.1_796503_797163_-	PRK14345, PRK14345, lipoyl(octanoyl) transferase LipB	NA|245aa|up_0|NZ_CP019605.1_797162_797897_-	pfam04474, DUF554, Protein of unknown function (DUF554)	NA|467aa|down_0|NZ_CP019605.1_799819_801220_-	PRK06416, PRK06416, dihydrolipoamide dehydrogenase; Reviewed	NA|100aa|down_1|NZ_CP019605.1_801327_801627_+	NA	NA|502aa|down_2|NZ_CP019605.1_801617_803123_-	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|110aa|down_3|NZ_CP019605.1_803157_803487_+	NA	NA|69aa|down_4|NZ_CP019605.1_803431_803638_-	NA	NA|219aa|down_5|NZ_CP019605.1_803637_804294_-	pfam11241, DUF3043, Protein of unknown function (DUF3043)	NA|260aa|down_6|NZ_CP019605.1_804890_805670_+	COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms]	NA|295aa|down_7|NZ_CP019605.1_805998_806883_+	pfam02595, Gly_kinase, Glycerate kinase family	NA|120aa|down_8|NZ_CP019605.1_806940_807300_+	TIGR00049, Uncharacterized_protein_in_nifU_5'region, Iron-sulfur cluster assembly accessory protein	NA|251aa|down_9|NZ_CP019605.1_807538_808291_+	COG1622, CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion]
GCF_001997295.1_ASM199729v1	NZ_CP019605	Tessaracoccus flavus strain RP1 chromosome, complete genome	3	1785440-1785514	2	CRISPRCasFinder	no		DEDDh,DinG,cas3,WYL,csa3	Orphan	CACGAGGAACGTCCGTCGAAGGGT	24	1	5	1785464-1785490|1785464-1785490|1785464-1785490|1785464-1785490|1785464-1785490	NZ_CP019605.1_66799-66773|NZ_CP019605.1_2065119-2065145|NZ_CP019605.1_2901378-2901404|NZ_CP019605.1_2901571-2901597|NZ_CP019605.1_497310-497336	NA	1	1	Orphan	DEDDh,DinG,cas3,WYL,csa3	NA|165aa|up_2|NZ_CP019605.1_1783723_1784218_-,NA|136aa|down_7|NZ_CP019605.1_1793127_1793535_+	NA|370aa|up_9|NZ_CP019605.1_1779070_1780180_-	PRK00488, pheS, phenylalanyl-tRNA synthetase subunit alpha; Validated	NA|240aa|up_8|NZ_CP019605.1_1780179_1780899_-	COG0566, SpoU, rRNA methylases [Translation, ribosomal structure and biogenesis]	NA|123aa|up_7|NZ_CP019605.1_1781006_1781375_-	PRK05185, rplT, 50S ribosomal protein L20; Provisional	NA|69aa|up_6|NZ_CP019605.1_1781426_1781633_-	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed	NA|229aa|up_5|NZ_CP019605.1_1781678_1782365_-	PRK00028, infC, translation initiation factor IF-3; Reviewed	NA|165aa|up_4|NZ_CP019605.1_1782593_1783088_-	pfam07179, SseB, SseB protein N-terminal domain	NA|162aa|up_3|NZ_CP019605.1_1783148_1783634_+	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|165aa|up_2|NZ_CP019605.1_1783723_1784218_-	NA	NA|287aa|up_1|NZ_CP019605.1_1784214_1785075_-	PRK00489, hisG, ATP phosphoribosyltransferase; Reviewed	NA|88aa|up_0|NZ_CP019605.1_1785082_1785346_-	cd11547, NTP-PPase_HisE, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3	NA|417aa|down_0|NZ_CP019605.1_1785623_1786874_-	PRK12418, PRK12418, cysteinyl-tRNA synthetase; Provisional	NA|241aa|down_1|NZ_CP019605.1_1786934_1787657_-	TIGR03843, Phosphatidylinositol_3-_and_4-kinase, conserved hypothetical protein	NA|176aa|down_2|NZ_CP019605.1_1787653_1788181_-	pfam11290, DUF3090, Protein of unknown function (DUF3090)	NA|217aa|down_3|NZ_CP019605.1_1788182_1788833_-	TIGR03848, MSMEG_4193, probable phosphomutase, MSMEG_4193 family	NA|275aa|down_4|NZ_CP019605.1_1788943_1789768_+	PRK12554, PRK12554, undecaprenyl pyrophosphate phosphatase; Reviewed	NA|321aa|down_5|NZ_CP019605.1_1789779_1790742_+	cd19087, AKR_AKR12A1_B1_C1, AKR12A, AKR12B,  AKR12C families of aldo-keto reductase (AKR)	NA|125aa|down_6|NZ_CP019605.1_1790780_1791155_-	pfam11528, DUF3224, Protein of unknown function (DUF3224)	NA|136aa|down_7|NZ_CP019605.1_1793127_1793535_+	NA	NA|883aa|down_8|NZ_CP019605.1_1793518_1796167_+	pfam12770, CHAT, CHAT domain	NA|106aa|down_9|NZ_CP019605.1_1798195_1798513_-	pfam13518, HTH_28, Helix-turn-helix domain
GCF_001997295.1_ASM199729v1	NZ_CP019605	Tessaracoccus flavus strain RP1 chromosome, complete genome	4	1982416-1982516	3	CRISPRCasFinder	no		DEDDh,DinG,cas3,WYL,csa3	Orphan	TCCCTGAGCTTGTCGAAGGGTAACGGCCCCGATC	34	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,WYL,csa3	NA|125aa|up_9|NZ_CP019605.1_1971068_1971443_+,NA|256aa|up_5|NZ_CP019605.1_1975375_1976143_-,NA|81aa|up_4|NZ_CP019605.1_1976251_1976494_-,NA|169aa|down_0|NZ_CP019605.1_1982836_1983343_-,NA|149aa|down_4|NZ_CP019605.1_1986221_1986668_-,NA|243aa|down_5|NZ_CP019605.1_1988345_1989074_+,NA|140aa|down_7|NZ_CP019605.1_1991344_1991764_-	NA|125aa|up_9|NZ_CP019605.1_1971068_1971443_+	NA	NA|773aa|up_8|NZ_CP019605.1_1971515_1973834_-	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system	NA|80aa|up_7|NZ_CP019605.1_1973941_1974181_-	pfam09954, DUF2188, Uncharacterized protein conserved in bacteria (DUF2188)	NA|386aa|up_6|NZ_CP019605.1_1974215_1975373_-	pfam06114, Peptidase_M78, IrrE N-terminal-like domain	NA|256aa|up_5|NZ_CP019605.1_1975375_1976143_-	NA	NA|81aa|up_4|NZ_CP019605.1_1976251_1976494_-	NA	NA|195aa|up_3|NZ_CP019605.1_1978375_1978960_-	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|239aa|up_2|NZ_CP019605.1_1978978_1979695_-	cd01310, TatD_DNAse, TatD like proteins;  E	NA|297aa|up_1|NZ_CP019605.1_1979846_1980737_+	PRK05377, PRK05377, fructose-1,6-bisphosphate aldolase; Reviewed	NA|535aa|up_0|NZ_CP019605.1_1980750_1982355_+	COG1233, COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]	NA|169aa|down_0|NZ_CP019605.1_1982836_1983343_-	NA	NA|586aa|down_1|NZ_CP019605.1_1983528_1985286_+	TIGR02456, Trehalose_synthase, trehalose synthase	NA|110aa|down_2|NZ_CP019605.1_1985336_1985666_+	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|178aa|down_3|NZ_CP019605.1_1985662_1986196_-	COG2323, COG2323, Predicted membrane protein [Function unknown]	NA|149aa|down_4|NZ_CP019605.1_1986221_1986668_-	NA	NA|243aa|down_5|NZ_CP019605.1_1988345_1989074_+	NA	NA|455aa|down_6|NZ_CP019605.1_1989221_1990586_+	pfam13701, DDE_Tnp_1_4, Transposase DDE domain group 1	NA|140aa|down_7|NZ_CP019605.1_1991344_1991764_-	NA	NA|457aa|down_8|NZ_CP019605.1_1991766_1993137_-	pfam14040, DNase_NucA_NucB, Deoxyribonuclease NucA/NucB	NA|455aa|down_9|NZ_CP019605.1_1993488_1994853_+	pfam13701, DDE_Tnp_1_4, Transposase DDE domain group 1
GCF_001997295.1_ASM199729v1	NZ_CP019605	Tessaracoccus flavus strain RP1 chromosome, complete genome	5	2265388-2265473	4	CRISPRCasFinder	no		DEDDh,DinG,cas3,WYL,csa3	Orphan	GGCAGCCCGGAACGCCAACGGAGGG	25	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,WYL,csa3	NA|265aa|up_3|NZ_CP019605.1_2262737_2263532_-,NA|235aa|down_0|NZ_CP019605.1_2265804_2266509_-,NA|328aa|down_3|NZ_CP019605.1_2269498_2270482_+,NA|171aa|down_8|NZ_CP019605.1_2275254_2275767_+	NA|670aa|up_9|NZ_CP019605.1_2257685_2259695_-	COG1331, COG1331, Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]	NA|197aa|up_8|NZ_CP019605.1_2259741_2260332_+	pfam01694, Rhomboid, Rhomboid family	NA|299aa|up_7|NZ_CP019605.1_2260372_2261269_-	TIGR03446, mycothiol_Mca, mycothiol conjugate amidase Mca	NA|134aa|up_6|NZ_CP019605.1_2261329_2261731_+	pfam14155, DUF4307, Domain of unknown function (DUF4307)	NA|168aa|up_5|NZ_CP019605.1_2261743_2262247_+	PRK00226, greA, transcription elongation factor GreA; Reviewed	NA|139aa|up_4|NZ_CP019605.1_2262319_2262736_-	pfam09862, DUF2089, Protein of unknown function (DUF2089)	NA|265aa|up_3|NZ_CP019605.1_2262737_2263532_-	NA	NA|226aa|up_2|NZ_CP019605.1_2263652_2264330_+	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional	NA|61aa|up_1|NZ_CP019605.1_2264347_2264530_+	pfam14235, DUF4337, Domain of unknown function (DUF4337)	NA|223aa|up_0|NZ_CP019605.1_2264586_2265255_+	PRK00058, PRK00058, peptide-methionine (S)-S-oxide reductase MsrA	NA|235aa|down_0|NZ_CP019605.1_2265804_2266509_-	NA	NA|574aa|down_1|NZ_CP019605.1_2266708_2268430_+	pfam02457, DisA_N, DisA bacterial checkpoint controller nucleotide-binding	NA|329aa|down_2|NZ_CP019605.1_2268477_2269464_+	cd19086, AKR_AKR11C1, AKR11C family of aldo-keto reductase (AKR)	NA|328aa|down_3|NZ_CP019605.1_2269498_2270482_+	NA	NA|295aa|down_4|NZ_CP019605.1_2270967_2271852_-	COG2321, COG2321, Predicted metalloprotease [General function prediction only]	NA|231aa|down_5|NZ_CP019605.1_2271951_2272644_+	cd04684, Nudix_Hydrolase_25, Contains a crystal structure of the Nudix hydrolase from Enterococcus faecalis, which has an unknown function	NA|280aa|down_6|NZ_CP019605.1_2272633_2273473_-	pfam12811, BaxI_1, Bax inhibitor 1 like	NA|485aa|down_7|NZ_CP019605.1_2273637_2275092_+	COG1236, YSH1, Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Translation, ribosomal structure and biogenesis]	NA|171aa|down_8|NZ_CP019605.1_2275254_2275767_+	NA	NA|506aa|down_9|NZ_CP019605.1_2275789_2277307_+	COG2268, COG2268, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_001997295.1_ASM199729v1	NZ_CP019605	Tessaracoccus flavus strain RP1 chromosome, complete genome	6	2354283-2354375	5	CRISPRCasFinder	no		DEDDh,DinG,cas3,WYL,csa3	Orphan	GGAGACGGAATGGGCCAGTTCGG	23	1	1	2354306-2354352	NZ_CP019605.1_2354341-2354387	NA	1	1	Orphan	DEDDh,DinG,cas3,WYL,csa3	NA,NA|253aa|down_0|NZ_CP019605.1_2354473_2355232_-,NA|116aa|down_6|NZ_CP019605.1_2359291_2359639_-,NA|369aa|down_9|NZ_CP019605.1_2363711_2364818_-	NA|280aa|up_9|NZ_CP019605.1_2339329_2340169_-	COG0313, COG0313, Predicted methyltransferases [General function prediction only]	NA|491aa|up_8|NZ_CP019605.1_2340325_2341798_+	COG1928, PMT1, Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]	NA|244aa|up_7|NZ_CP019605.1_2342041_2342773_+	pfam14498, Glyco_hyd_65N_2, Glycosyl hydrolase family 65, N-terminal domain	NA|783aa|up_6|NZ_CP019605.1_2342811_2345160_+	TIGR03434, ADOP, Acidobacterial duplicated orphan permease	NA|253aa|up_5|NZ_CP019605.1_2345168_2345927_+	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|497aa|up_4|NZ_CP019605.1_2346264_2347755_+	pfam05345, He_PIG, Putative Ig domain	NA|365aa|up_3|NZ_CP019605.1_2348029_2349124_-	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]	NA|473aa|up_2|NZ_CP019605.1_2349256_2350675_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|160aa|up_1|NZ_CP019605.1_2350697_2351177_+	smart00903, Flavin_Reduct, Flavin reductase like domain	NA|900aa|up_0|NZ_CP019605.1_2351228_2353928_-	pfam03200, Glyco_hydro_63, Glycosyl hydrolase family 63 C-terminal domain	NA|253aa|down_0|NZ_CP019605.1_2354473_2355232_-	NA	NA|431aa|down_1|NZ_CP019605.1_2355301_2356594_-	cd00887, MoeA, MoeA family	NA|192aa|down_2|NZ_CP019605.1_2356611_2357187_+	TIGR02727, Uncharacterized_protein_YqgN, 5,10-methenyltetrahydrofolate synthetase	NA|90aa|down_3|NZ_CP019605.1_2357300_2357570_+	COG2331, COG2331, Uncharacterized protein conserved in bacteria [Function unknown]	NA|206aa|down_4|NZ_CP019605.1_2357675_2358293_+	cd11614, SAF_CpaB_FlgA_like, SAF domains of the flagella basal body P-ring formation protein FlgA and the flp pilus assembly CpaB	NA|123aa|down_5|NZ_CP019605.1_2358432_2358801_+	pfam01741, MscL, Large-conductance mechanosensitive channel, MscL	NA|116aa|down_6|NZ_CP019605.1_2359291_2359639_-	NA	NA|459aa|down_7|NZ_CP019605.1_2359631_2361008_-	pfam01704, UDPGP, UTP--glucose-1-phosphate uridylyltransferase	NA|865aa|down_8|NZ_CP019605.1_2361120_2363715_-	cd04208, CuRO_2_CuNIR, Cupredoxin domain 2 of Copper-containing nitrite reductase	NA|369aa|down_9|NZ_CP019605.1_2363711_2364818_-	NA
GCF_001997295.1_ASM199729v1	NZ_CP019605	Tessaracoccus flavus strain RP1 chromosome, complete genome	7	2450765-2450877	6	CRISPRCasFinder	no		DEDDh,DinG,cas3,WYL,csa3	Orphan	GAGTAGGGAGCGAGGAACGAGCGACCG	27	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,WYL,csa3	NA,NA	NA|447aa|up_9|NZ_CP019605.1_2437721_2439062_-	smart00481, POLIIIAc, DNA polymerase alpha chain like domain	NA|819aa|up_8|NZ_CP019605.1_2439083_2441540_-	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	NA|458aa|up_7|NZ_CP019605.1_2441564_2442938_-	TIGR01350, Dihydrolipoyl_dehydrogenase, dihydrolipoamide dehydrogenase	NA|455aa|up_6|NZ_CP019605.1_2442952_2444317_-	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed	NA|251aa|up_5|NZ_CP019605.1_2444332_2445085_-	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|243aa|up_4|NZ_CP019605.1_2445580_2446309_+	pfam02517, Abi, CAAX protease self-immunity	NA|473aa|up_3|NZ_CP019605.1_2446310_2447729_+	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	NA|224aa|up_2|NZ_CP019605.1_2447915_2448587_+	PRK12656, PRK12656, fructose-6-phosphate aldolase; Reviewed	NA|298aa|up_1|NZ_CP019605.1_2448679_2449573_-	COG2267, PldB, Lysophospholipase [Lipid metabolism]	NA|350aa|up_0|NZ_CP019605.1_2449665_2450715_+	COG0095, LplA, Lipoate-protein ligase A [Coenzyme metabolism]	NA|146aa|down_0|NZ_CP019605.1_2451361_2451799_-	pfam05025, RbsD_FucU, RbsD / FucU transport protein family	NA|329aa|down_1|NZ_CP019605.1_2451812_2452799_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|472aa|down_2|NZ_CP019605.1_2452791_2454207_-	cd07771, FGGY_RhuK, L-rhamnulose kinases; a subfamily of the FGGY family of carbohydrate kinases	NA|590aa|down_3|NZ_CP019605.1_2454385_2456155_-	PRK10991, fucI, L-fucose isomerase; Provisional	NA|361aa|down_4|NZ_CP019605.1_2456365_2457448_-	cd20005, PBP1_ABC_sugar_binding-like, monosaccharide ABC transporter substrate-binding protein such as CUT2	NA|320aa|down_5|NZ_CP019605.1_2457517_2458477_-	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|506aa|down_6|NZ_CP019605.1_2458518_2460036_-	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|387aa|down_7|NZ_CP019605.1_2460691_2461852_-	PRK07003, PRK07003, DNA polymerase III subunit gamma/tau	NA|171aa|down_8|NZ_CP019605.1_2461848_2462361_-	TIGR02983, putative_RNA_polymerase_ECF-subfamily_sigma_factor, RNA polymerase sigma-70 factor, sigma-E family	NA|75aa|down_9|NZ_CP019605.1_2463746_2463971_-	COG2186, FadR, Transcriptional regulators [Transcription]
GCF_001997295.1_ASM199729v1	NZ_CP019605	Tessaracoccus flavus strain RP1 chromosome, complete genome	8	2662665-2662737	7	CRISPRCasFinder	no		DEDDh,DinG,cas3,WYL,csa3	Orphan	GCCGGCCGCTACTCAGGGAAACGT	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,WYL,csa3	NA,NA	NA|641aa|up_9|NZ_CP019605.1_2650246_2652169_+	pfam13539, Peptidase_M15_4, D-alanyl-D-alanine carboxypeptidase	NA|258aa|up_8|NZ_CP019605.1_2652165_2652939_+	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|393aa|up_7|NZ_CP019605.1_2652940_2654119_-	PRK14950, PRK14950, DNA polymerase III subunits gamma and tau; Provisional	NA|414aa|up_6|NZ_CP019605.1_2654257_2655499_+	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|208aa|up_5|NZ_CP019605.1_2655848_2656472_-	cd00452, KDPG_aldolase, KDPG and KHG aldolase	NA|457aa|up_4|NZ_CP019605.1_2656552_2657923_+	TIGR00895, transport_protein, benzoate transport	NA|357aa|up_3|NZ_CP019605.1_2657969_2659040_-	pfam03816, LytR_cpsA_psr, Cell envelope-related transcriptional attenuator domain	NA|202aa|up_2|NZ_CP019605.1_2659169_2659775_+	COG4095, COG4095, Uncharacterized conserved protein [Function unknown]	NA|269aa|up_1|NZ_CP019605.1_2659812_2660619_+	pfam00173, Cyt-b5, Cytochrome b5-like Heme/Steroid binding domain	NA|426aa|up_0|NZ_CP019605.1_2661300_2662578_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|365aa|down_0|NZ_CP019605.1_2662740_2663835_-	cd15482, Sialidase_non-viral, Non-viral sialidases	NA|227aa|down_1|NZ_CP019605.1_2663831_2664512_-	PRK01130, PRK01130, putative N-acetylmannosamine-6-phosphate 2-epimerase	NA|310aa|down_2|NZ_CP019605.1_2664508_2665438_-	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|306aa|down_3|NZ_CP019605.1_2665434_2666352_-	cd00408, DHDPS-like, Dihydrodipicolinate synthase family	NA|263aa|down_4|NZ_CP019605.1_2666378_2667167_-	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|694aa|down_5|NZ_CP019605.1_2667163_2669245_-	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|322aa|down_6|NZ_CP019605.1_2669244_2670210_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|555aa|down_7|NZ_CP019605.1_2670313_2671978_-	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|254aa|down_8|NZ_CP019605.1_2672101_2672863_+	COG2186, FadR, Transcriptional regulators [Transcription]	NA|424aa|down_9|NZ_CP019605.1_2672898_2674170_+	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters
GCF_001997295.1_ASM199729v1	NZ_CP019605	Tessaracoccus flavus strain RP1 chromosome, complete genome	9	2808104-2808176	8	CRISPRCasFinder	no	csa3	DEDDh,DinG,cas3,WYL,csa3	Type I-A	CCTCGCGCAAAGCGCTCGTCACTG	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,WYL,csa3	NA,NA|164aa|down_0|NZ_CP019605.1_2808219_2808711_+	NA|463aa|up_9|NZ_CP019605.1_2797023_2798412_-	PRK00485, fumC, fumarate hydratase; Reviewed	NA|730aa|up_8|NZ_CP019605.1_2798595_2800785_-	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B	NA|70aa|up_7|NZ_CP019605.1_2800889_2801099_-	cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones	NA|103aa|up_6|NZ_CP019605.1_2801110_2801419_-	pfam02583, Trns_repr_metal, Metal-sensitive transcriptional repressor	NA|451aa|up_5|NZ_CP019605.1_2801955_2803308_+	TIGR00665, DnaB, replicative DNA helicase	csa3|124aa|up_4|NZ_CP019605.1_2803832_2804204_-	COG0640, ArsR, Predicted transcriptional regulators [Transcription]	NA|145aa|up_3|NZ_CP019605.1_2804286_2804721_+	pfam06953, ArsD, Arsenical resistance operon trans-acting repressor ArsD	NA|586aa|up_2|NZ_CP019605.1_2804720_2806478_+	TIGR04291, Arsenical_pump-driving_ATPase, arsenical pump-driving ATPase	NA|206aa|up_1|NZ_CP019605.1_2806495_2807113_+	cd16345, LMWP_ArsC, Arsenate reductase of the LMWP family	NA|281aa|up_0|NZ_CP019605.1_2807124_2807967_+	cd16345, LMWP_ArsC, Arsenate reductase of the LMWP family	NA|164aa|down_0|NZ_CP019605.1_2808219_2808711_+	NA	NA|248aa|down_1|NZ_CP019605.1_2808866_2809610_+	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair]	NA|200aa|down_2|NZ_CP019605.1_2809687_2810287_+	cd02603, HAD_sEH-N_like, N-terminal lipase phosphatase domain of human soluble epoxide hydrolase, Escherichia coli YihX/HAD4 alpha-D-glucose 1-phosphate phosphatase, and related domains, may be inactive	NA|203aa|down_3|NZ_CP019605.1_2810283_2810892_+	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]	NA|400aa|down_4|NZ_CP019605.1_2810881_2812081_-	cd17353, MFS_OFA_like, Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of transporters	NA|390aa|down_5|NZ_CP019605.1_2813344_2814514_+	COG0448, GlgC, ADP-glucose pyrophosphorylase [Carbohydrate transport and metabolism]	NA|375aa|down_6|NZ_CP019605.1_2814563_2815688_+	cd05305, L-AlaDH, Alanine dehydrogenase NAD-binding and catalytic domains	NA|807aa|down_7|NZ_CP019605.1_2815965_2818386_+	pfam06662, C5-epim_C, D-glucuronyl C5-epimerase C-terminus	NA|191aa|down_8|NZ_CP019605.1_2818710_2819283_+	cd03577, NTR_TIMP_like, NTR domain, TIMP-like subfamily; TIMPs, or tissue inibitors of metalloproteases, are essential regulators of extracellular matrix turnover and remodeling	NA|199aa|down_9|NZ_CP019605.1_2819279_2819876_-	pfam13548, DUF4126, Domain of unknown function (DUF4126)
GCF_001997295.1_ASM199729v1	NZ_CP019605	Tessaracoccus flavus strain RP1 chromosome, complete genome	10	3073822-3073911	9	CRISPRCasFinder	no		DEDDh,DinG,cas3,WYL,csa3	Orphan	TGATCCCTGAGCTGGTCGAAGGGT	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,WYL,csa3	NA|93aa|up_7|NZ_CP019605.1_3063417_3063696_+,NA|81aa|down_3|NZ_CP019605.1_3077624_3077867_-	NA|478aa|up_9|NZ_CP019605.1_3056013_3057447_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|1840aa|up_8|NZ_CP019605.1_3057874_3063394_+	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism]	NA|93aa|up_7|NZ_CP019605.1_3063417_3063696_+	NA	NA|643aa|up_6|NZ_CP019605.1_3063715_3065644_-	COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism]	NA|77aa|up_5|NZ_CP019605.1_3065657_3065888_-	cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones	NA|226aa|up_4|NZ_CP019605.1_3066004_3066682_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|466aa|up_3|NZ_CP019605.1_3066882_3068280_+	TIGR01777, Hypothetical_UPF0105_protein_Rv2216/MT2273/Mb2239	NA|683aa|up_2|NZ_CP019605.1_3068342_3070391_-	cd17502, MFS_Azr1_MDR_like, Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|594aa|up_1|NZ_CP019605.1_3070444_3072226_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|482aa|up_0|NZ_CP019605.1_3072361_3073807_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|439aa|down_0|NZ_CP019605.1_3074100_3075417_+	pfam02417, Chromate_transp, Chromate transporter	NA|52aa|down_1|NZ_CP019605.1_3075402_3075558_-	PRK13745, PRK13745, anaerobic sulfatase-maturation protein	NA|429aa|down_2|NZ_CP019605.1_3076158_3077445_-	cd06114, EcCS_like, Escherichia coli (Ec) citrate synthase (CS) GltA_like	NA|81aa|down_3|NZ_CP019605.1_3077624_3077867_-	NA	NA|452aa|down_4|NZ_CP019605.1_3078077_3079433_+	COG2270, COG2270, Permeases of the major facilitator superfamily [General function prediction only]	NA|405aa|down_5|NZ_CP019605.1_3079479_3080694_+	TIGR04053, sam_11, radical SAM protein, BA_1875 family	NA|327aa|down_6|NZ_CP019605.1_3081273_3082254_+	COG0462, PrsA, Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism]	NA|179aa|down_7|NZ_CP019605.1_3082260_3082797_-	pfam03358, FMN_red, NADPH-dependent FMN reductase	NA|450aa|down_8|NZ_CP019605.1_3082880_3084230_-	TIGR00720, hypothetical_protein_NEICINOT_00681, L-serine dehydratase, iron-sulfur-dependent, single chain form	NA|436aa|down_9|NZ_CP019605.1_3084229_3085537_-	cd06174, MFS, Major Facilitator Superfamily
GCF_001997295.1_ASM199729v1	NZ_CP019605	Tessaracoccus flavus strain RP1 chromosome, complete genome	11	3106294-3106401	10	CRISPRCasFinder	no		DEDDh,DinG,cas3,WYL,csa3	Orphan	GCGCTCGCCGGCCCTGCTCAGGGA	24	1	1	3106318-3106377	NZ_CP019605.1_143141-143200	NA	1	1	Orphan	DEDDh,DinG,cas3,WYL,csa3	NA|175aa|up_4|NZ_CP019605.1_3101714_3102239_-,NA|197aa|down_1|NZ_CP019605.1_3107250_3107841_+,NA|334aa|down_3|NZ_CP019605.1_3108595_3109597_+	NA|891aa|up_9|NZ_CP019605.1_3093824_3096497_+	PRK11198, PRK11198, LysM domain/BON superfamily protein; Provisional	NA|358aa|up_8|NZ_CP019605.1_3096721_3097795_+	PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional	NA|386aa|up_7|NZ_CP019605.1_3097859_3099017_+	TIGR04036, family_protein, putative luciferase-like monooxygenase, FMN-dependent, CE1758 family	NA|197aa|up_6|NZ_CP019605.1_3099043_3099634_+	TIGR04037, predicted_flavoprotein, LLM-partnered FMN reductase, CE1759 family	NA|583aa|up_5|NZ_CP019605.1_3099918_3101667_-	NF033189, internalin_A, class 1 internalin InlA	NA|175aa|up_4|NZ_CP019605.1_3101714_3102239_-	NA	NA|306aa|up_3|NZ_CP019605.1_3102249_3103167_-	TIGR03445, mycothiol_MshB, N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase	NA|79aa|up_2|NZ_CP019605.1_3103284_3103521_-	COG4877, COG4877, Uncharacterized protein conserved in bacteria [Function unknown]	NA|329aa|up_1|NZ_CP019605.1_3103553_3104540_-	cd03402, SPFH_like_u2, Uncharacterized family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|438aa|up_0|NZ_CP019605.1_3104628_3105942_+	cd17370, MFS_MJ1317_like, MJ1317 and similar transporters of the Major Facilitator Superfamily	NA|250aa|down_0|NZ_CP019605.1_3106504_3107254_+	pfam08818, DUF1801, Domain of unknown function (DU1801)	NA|197aa|down_1|NZ_CP019605.1_3107250_3107841_+	NA	NA|207aa|down_2|NZ_CP019605.1_3107884_3108505_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|334aa|down_3|NZ_CP019605.1_3108595_3109597_+	NA	NA|787aa|down_4|NZ_CP019605.1_3109689_3112050_+	cd11326, AmyAc_Glg_debranch, Alpha amylase catalytic domain found in glycogen debranching enzymes	NA|296aa|down_5|NZ_CP019605.1_3112219_3113107_+	pfam03618, Kinase-PPPase, Kinase/pyrophosphorylase	NA|269aa|down_6|NZ_CP019605.1_3113460_3114267_+	pfam14344, DUF4397, Domain of unknown function (DUF4397)	NA|188aa|down_7|NZ_CP019605.1_3114374_3114938_+	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription]	NA|209aa|down_8|NZ_CP019605.1_3114930_3115557_+	pfam10099, RskA, Anti-sigma-K factor rskA	NA|885aa|down_9|NZ_CP019605.1_3115713_3118368_+	PRK09279, PRK09279, pyruvate phosphate dikinase; Provisional
