assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001998915.1_ASM199891v1	NZ_CP019614	Listeria monocytogenes strain 10-092876-1559 LM1 chromosome, complete genome	1	529346-529960	1,1	PILER-CR,CRISPRCasFinder	no		csa3,DinG,cas3,WYL,casR,DEDDh	Orphan	GTTTTAGTTACTTATTGTGAAATGTAAAT,GTTTTAGTTACTTATTGTGAAATGTAAAT	29,29	0	0	NA	NA	I-A:I-A	9,9	9	Orphan	csa3,DinG,cas3,WYL,casR,DEDDh	NA|133aa|up_5|NZ_CP019614.1_524335_524734_+,NA|193aa|down_0|NZ_CP019614.1_530351_530930_+	NA|217aa|up_9|NZ_CP019614.1_520398_521049_+	COG0176, MipB, Transaldolase [Carbohydrate transport and metabolism]	NA|687aa|up_8|NZ_CP019614.1_521157_523218_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|201aa|up_7|NZ_CP019614.1_523221_523824_+	COG0794, GutQ, Predicted sugar phosphate isomerase involved in capsule formation [Cell envelope biogenesis, outer membrane]	NA|156aa|up_6|NZ_CP019614.1_523851_524319_+	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit	NA|133aa|up_5|NZ_CP019614.1_524335_524734_+	NA	NA|217aa|up_4|NZ_CP019614.1_524744_525395_+	COG0036, Rpe, Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]	NA|349aa|up_3|NZ_CP019614.1_525391_526438_+	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases	NA|98aa|up_2|NZ_CP019614.1_526453_526747_+	cd05566, PTS_IIB_galactitol, PTS_IIB_galactitol: subunit IIB of enzyme II (EII) of the galactitol-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|424aa|up_1|NZ_CP019614.1_526761_528033_+	COG3775, GatC, Phosphotransferase system, galactitol-specific IIC component [Carbohydrate transport and metabolism]	NA|312aa|up_0|NZ_CP019614.1_528172_529108_+	PRK01259, PRK01259, ribose-phosphate diphosphokinase	NA|193aa|down_0|NZ_CP019614.1_530351_530930_+	NA	NA|227aa|down_1|NZ_CP019614.1_531037_531718_+	cd01741, GATase1_1, Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain	NA|120aa|down_2|NZ_CP019614.1_531742_532102_-	TIGR02058, lin0512_fam, conserved hypothetical protein	NA|153aa|down_3|NZ_CP019614.1_532108_532567_-	pfam12802, MarR_2, MarR family	NA|612aa|down_4|NZ_CP019614.1_532948_534784_+	NF033186, internalin_K, class 1 internalin InlK	NA|144aa|down_5|NZ_CP019614.1_534884_535316_+	pfam00582, Usp, Universal stress protein family	NA|477aa|down_6|NZ_CP019614.1_535362_536793_-	COG2843, PgsA, Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) [Cell envelope biogenesis, outer membrane]	NA|272aa|down_7|NZ_CP019614.1_536913_537729_-	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]	NA|123aa|down_8|NZ_CP019614.1_538009_538378_-	COG3759, COG3759, Predicted membrane protein [Function unknown]	NA|472aa|down_9|NZ_CP019614.1_538524_539940_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily
GCF_001998915.1_ASM199891v1	NZ_CP019614	Listeria monocytogenes strain 10-092876-1559 LM1 chromosome, complete genome	2	2811640-2811750	2	CRISPRCasFinder	no		csa3,DinG,cas3,WYL,casR,DEDDh	Orphan	AGCGATGATTTAATCCTTCCCAGAACTTTCAAAA	34	0	0	NA	NA	NA	1	1	Orphan	csa3,DinG,cas3,WYL,casR,DEDDh	NA,NA|74aa|down_2|NZ_CP019614.1_2812519_2812741_-,NA|52aa|down_4|NZ_CP019614.1_2814682_2814838_+,NA|214aa|down_5|NZ_CP019614.1_2815409_2816051_-	NA|330aa|up_9|NZ_CP019614.1_2803565_2804555_+	PRK14481, PRK14481, dihydroxyacetone kinase subunit DhaK; Provisional	NA|199aa|up_8|NZ_CP019614.1_2804576_2805173_+	TIGR02365, dha_L_ycgS, dihydroxyacetone kinase, phosphoprotein-dependent, L subunit	NA|125aa|up_7|NZ_CP019614.1_2805176_2805551_+	PRK14484, PRK14484, phosphotransferase mannnose-specific family component IIA; Provisional	NA|284aa|up_6|NZ_CP019614.1_2805656_2806508_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|280aa|up_5|NZ_CP019614.1_2806626_2807466_+	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily	NA|281aa|up_4|NZ_CP019614.1_2807586_2808429_+	COG0656, ARA1, Aldo/keto reductases, related to diketogulonate reductase [General function prediction only]	NA|82aa|up_3|NZ_CP019614.1_2808474_2808720_-	pfam10704, DUF2508, Protein of unknown function (DUF2508)	NA|199aa|up_2|NZ_CP019614.1_2808734_2809331_-	PRK00076, recR, recombination protein RecR; Reviewed	NA|106aa|up_1|NZ_CP019614.1_2809439_2809757_-	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein	NA|580aa|up_0|NZ_CP019614.1_2809786_2811526_-	PRK05563, PRK05563, DNA polymerase III subunits gamma and tau; Validated	NA|155aa|down_0|NZ_CP019614.1_2811852_2812317_-	pfam11687, DUF3284, Domain of unknown function (DUF3284)	NA|61aa|down_1|NZ_CP019614.1_2812334_2812517_-	pfam11384, DUF3188, Protein of unknown function (DUF3188)	NA|74aa|down_2|NZ_CP019614.1_2812519_2812741_-	NA	NA|455aa|down_3|NZ_CP019614.1_2812875_2814240_-	COG1455, CelB, Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism]	NA|52aa|down_4|NZ_CP019614.1_2814682_2814838_+	NA	NA|214aa|down_5|NZ_CP019614.1_2815409_2816051_-	NA	NA|505aa|down_6|NZ_CP019614.1_2816748_2818263_-	cd07770, FGGY_GntK, Gluconate kinases; a subfamily of the FGGY family of carbohydrate kinases	NA|313aa|down_7|NZ_CP019614.1_2818378_2819317_-	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown]	NA|316aa|down_8|NZ_CP019614.1_2819359_2820307_-	TIGR01167, Zinc_metalloprotease_ZmpB, LPXTG-motif cell wall anchor domain	NA|580aa|down_9|NZ_CP019614.1_2820448_2822188_-	COG4987, CydC, ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
