bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NZ_CP014402	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	3.1|848301|26|NZ_CP014402|CRISPRCasFinder	NZ_CP014402.1	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	96.15	26	1	0	1	26	811263	811238	433302-433402|672461-672553|848271-848356|855584-855671|891542-891623|997941-998223|1131612-1131699|2075174-2075252|2310237-2310387|2434154-2434347	1e-05	39.6	1.0	CCGCCAGCTTCTGTGTTGGGGCCCCG	811238-811263	CGGGGCCCCAACACAGAAGCAGGCGG	1
NZ_CP014402	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	3.1|848301|26|NZ_CP014402|CRISPRCasFinder	NZ_CP014402.1	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	96.15	26	1	0	1	26	2875476	2875501	433302-433402|672461-672553|848271-848356|855584-855671|891542-891623|997941-998223|1131612-1131699|2075174-2075252|2310237-2310387|2434154-2434347	1e-05	39.6	1.0	CCGCCAGCTTCTGTGTTGGGGCCCCG	2875476-2875501	CCGCCAGCTTCTATGTTGGGGCCCCG	1
NZ_CP014402	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	3.1|848301|26|NZ_CP014402|CRISPRCasFinder	NZ_CP014402.1	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	96.15	26	1	0	1	26	2875532	2875557	433302-433402|672461-672553|848271-848356|855584-855671|891542-891623|997941-998223|1131612-1131699|2075174-2075252|2310237-2310387|2434154-2434347	1e-05	39.6	1.0	CCGCCAGCTTCTGTGTTGGGGCCCCG	2875532-2875557	CCGCCAGCTTCTTTGTTGGGGCCCCG	1
NZ_CP014402	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	3.1|848301|26|NZ_CP014402|CRISPRCasFinder	NZ_CP014402.1	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	92.31	26	2	0	1	26	811319	811294	433302-433402|672461-672553|848271-848356|855584-855671|891542-891623|997941-998223|1131612-1131699|2075174-2075252|2310237-2310387|2434154-2434347	1e-04	36.5	1.0	CCGCCAGCTTCTGTGTTGGGGCCCCG	811294-811319	CGGGGCCCCAACATAGAAGCAGGCGG	2
NZ_CP014402	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	3.1|848301|26|NZ_CP014402|CRISPRCasFinder	NZ_CP014402.1	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	92.31	26	2	0	1	26	997940	997915	433302-433402|672461-672553|848271-848356|855584-855671|891542-891623|997941-998223|1131612-1131699|2075174-2075252|2310237-2310387|2434154-2434347	1e-04	36.5	1.0	CCGCCAGCTTCTGTGTTGGGGCCCCG	997915-997940	CGGGGCCCCAACACAGAGGCTGGTGG	2
NZ_CP014402	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	5.1|891566|34|NZ_CP014402|CRISPRCasFinder	NZ_CP014402.1	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	100.00	34	0	0	1	34	1424145	1424112	433302-433402|672461-672553|848271-848356|855584-855671|891542-891623|997941-998223|1131612-1131699|2075174-2075252|2310237-2310387|2434154-2434347	5e-10	55.5	1.0	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	1424112-1424145	ATGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	0
NZ_CP014402	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	5.1|891566|34|NZ_CP014402|CRISPRCasFinder	NZ_CP014402.1	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	100.00	34	0	0	1	34	1513304	1513337	433302-433402|672461-672553|848271-848356|855584-855671|891542-891623|997941-998223|1131612-1131699|2075174-2075252|2310237-2310387|2434154-2434347	5e-10	55.5	1.0	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	1513304-1513337	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	0
NZ_CP014402	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	6.1|997971|26|NZ_CP014402|CRT	NZ_CP014402.1	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	96.15	26	1	0	1	26	997915	997940	433302-433402|672461-672553|848271-848356|855584-855671|891542-891623|997941-998223|1131612-1131699|2075174-2075252|2310237-2310387|2434154-2434347	1e-05	39.6	1.0	CGGGGCCCCAACACAGAGGCTGGCGG	997915-997940	CGGGGCCCCAACACAGAGGCTGGTGG	1
NZ_CP014402	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	6.1|997971|26|NZ_CP014402|CRT	NZ_CP014402.1	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	92.31	26	2	0	1	26	811238	811263	433302-433402|672461-672553|848271-848356|855584-855671|891542-891623|997941-998223|1131612-1131699|2075174-2075252|2310237-2310387|2434154-2434347	1e-04	36.5	1.0	CGGGGCCCCAACACAGAGGCTGGCGG	811238-811263	CGGGGCCCCAACACAGAAGCAGGCGG	2
NZ_CP014402	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	6.1|997971|26|NZ_CP014402|CRT	NZ_CP014402.1	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	92.31	26	2	0	1	26	2875501	2875476	433302-433402|672461-672553|848271-848356|855584-855671|891542-891623|997941-998223|1131612-1131699|2075174-2075252|2310237-2310387|2434154-2434347	1e-04	36.5	1.0	CGGGGCCCCAACACAGAGGCTGGCGG	2875476-2875501	CCGCCAGCTTCTATGTTGGGGCCCCG	2
NZ_CP014402	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	6.1|997971|26|NZ_CP014402|CRT	NZ_CP014402.1	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	92.31	26	2	0	1	26	2875557	2875532	433302-433402|672461-672553|848271-848356|855584-855671|891542-891623|997941-998223|1131612-1131699|2075174-2075252|2310237-2310387|2434154-2434347	1e-04	36.5	1.0	CGGGGCCCCAACACAGAGGCTGGCGG	2875532-2875557	CCGCCAGCTTCTTTGTTGGGGCCCCG	2
NZ_CP014402	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	6.3|998085|26|NZ_CP014402|CRT	NZ_CP014402.1	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	96.15	26	1	0	1	26	848382	848357	433302-433402|672461-672553|848271-848356|855584-855671|891542-891623|997941-998223|1131612-1131699|2075174-2075252|2310237-2310387|2434154-2434347	1e-05	39.6	1.0	CGGGGCCCCAACACAGAAGCTGGCGA	848357-848382	TCGTCAGCTTCTGTGTTGGGGCCCCG	1
NZ_CP014402	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	6.3|998085|26|NZ_CP014402|CRT	NZ_CP014402.1	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	92.31	26	2	0	1	26	394635	394660	433302-433402|672461-672553|848271-848356|855584-855671|891542-891623|997941-998223|1131612-1131699|2075174-2075252|2310237-2310387|2434154-2434347	1e-04	36.5	1.0	CGGGGCCCCAACACAGAAGCTGGCGA	394635-394660	CGGGGCCCCAACAAAGAAGCTGACGA	2
NZ_CP014402	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	8.1|2075197|33|NZ_CP014402|CRISPRCasFinder	NZ_CP014402.1	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	96.97	33	1	0	1	33	848337	848369	433302-433402|672461-672553|848271-848356|855584-855671|891542-891623|997941-998223|1131612-1131699|2075174-2075252|2310237-2310387|2434154-2434347	1e-08	50.7	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	848337-848369	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	1
NZ_CP014402	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	8.1|2075197|33|NZ_CP014402|CRISPRCasFinder	NZ_CP014402.1	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	96.97	33	1	0	1	33	1215975	1215943	433302-433402|672461-672553|848271-848356|855584-855671|891542-891623|997941-998223|1131612-1131699|2075174-2075252|2310237-2310387|2434154-2434347	1e-08	50.7	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	1215943-1215975	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	1
NZ_CP014402	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	8.1|2075197|33|NZ_CP014402|CRISPRCasFinder	NZ_CP014402.1	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	96.97	33	1	0	1	33	1424099	1424067	433302-433402|672461-672553|848271-848356|855584-855671|891542-891623|997941-998223|1131612-1131699|2075174-2075252|2310237-2310387|2434154-2434347	1e-08	50.7	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	1424067-1424099	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	1
NZ_CP014402	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	8.1|2075197|33|NZ_CP014402|CRISPRCasFinder	NZ_CP014402.1	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	96.97	33	1	0	1	33	1741857	1741889	433302-433402|672461-672553|848271-848356|855584-855671|891542-891623|997941-998223|1131612-1131699|2075174-2075252|2310237-2310387|2434154-2434347	1e-08	50.7	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	1741857-1741889	CATTATAGTAAGCTGACTTTTCGTCAGCTTCTG	1
NZ_CP014402	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	8.1|2075197|33|NZ_CP014402|CRISPRCasFinder	NZ_CP014402.1	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	96.97	33	1	0	1	33	2710114	2710146	433302-433402|672461-672553|848271-848356|855584-855671|891542-891623|997941-998223|1131612-1131699|2075174-2075252|2310237-2310387|2434154-2434347	1e-08	50.7	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	2710114-2710146	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	1
NZ_CP014402	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	8.1|2075197|33|NZ_CP014402|CRISPRCasFinder	NZ_CP014402.1	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	93.94	33	2	0	1	33	1513350	1513382	433302-433402|672461-672553|848271-848356|855584-855671|891542-891623|997941-998223|1131612-1131699|2075174-2075252|2310237-2310387|2434154-2434347	1e-07	47.5	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	1513350-1513382	CATTATTGTAAGCTGACTTTTCGTCATCTTCTG	2
NZ_CP014402	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	10.1|2434177|33|NZ_CP014402|CRT	NZ_CP014402.1	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	93.94	33	2	0	1	33	848337	848369	433302-433402|672461-672553|848271-848356|855584-855671|891542-891623|997941-998223|1131612-1131699|2075174-2075252|2310237-2310387|2434154-2434347	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	848337-848369	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
NZ_CP014402	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	10.1|2434177|33|NZ_CP014402|CRT	NZ_CP014402.1	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	93.94	33	2	0	1	33	1215975	1215943	433302-433402|672461-672553|848271-848356|855584-855671|891542-891623|997941-998223|1131612-1131699|2075174-2075252|2310237-2310387|2434154-2434347	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	1215943-1215975	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	2
NZ_CP014402	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	10.1|2434177|33|NZ_CP014402|CRT	NZ_CP014402.1	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	93.94	33	2	0	1	33	1424099	1424067	433302-433402|672461-672553|848271-848356|855584-855671|891542-891623|997941-998223|1131612-1131699|2075174-2075252|2310237-2310387|2434154-2434347	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	1424067-1424099	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	2
NZ_CP014402	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	10.1|2434177|33|NZ_CP014402|CRT	NZ_CP014402.1	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	93.94	33	2	0	1	33	1513350	1513382	433302-433402|672461-672553|848271-848356|855584-855671|891542-891623|997941-998223|1131612-1131699|2075174-2075252|2310237-2310387|2434154-2434347	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	1513350-1513382	CATTATTGTAAGCTGACTTTTCGTCATCTTCTG	2
NZ_CP014402	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	10.1|2434177|33|NZ_CP014402|CRT	NZ_CP014402.1	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	93.94	33	2	0	1	33	2710114	2710146	433302-433402|672461-672553|848271-848356|855584-855671|891542-891623|997941-998223|1131612-1131699|2075174-2075252|2310237-2310387|2434154-2434347	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	2710114-2710146	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
NZ_CP014402	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	10.2|2434233|36|NZ_CP014402|CRT	NZ_CP014402.1	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	100.00	36	0	0	1	36	1215922	1215887	433302-433402|672461-672553|848271-848356|855584-855671|891542-891623|997941-998223|1131612-1131699|2075174-2075252|2310237-2310387|2434154-2434347	6e-11	58.6	1.0	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA	1215887-1215922	TAGAGAATTTCAAAAAGAAATTCTACAGACAATGCA	0
NZ_CP014402	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	10.2|2434233|36|NZ_CP014402|CRT	NZ_CP014402.1	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	97.22	36	1	0	1	36	1920343	1920308	433302-433402|672461-672553|848271-848356|855584-855671|891542-891623|997941-998223|1131612-1131699|2075174-2075252|2310237-2310387|2434154-2434347	5e-10	55.5	1.0	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA	1920308-1920343	TAGAGAATTTCGAAAAGAAATTCTACAGACAATGCA	1
NZ_CP014402	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	10.2|2434233|36|NZ_CP014402|CRT	NZ_CP014402.1	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	94.44	36	2	0	1	36	1741796	1741831	433302-433402|672461-672553|848271-848356|855584-855671|891542-891623|997941-998223|1131612-1131699|2075174-2075252|2310237-2310387|2434154-2434347	5e-09	52.3	1.0	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA	1741796-1741831	TGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTA	2
NZ_CP014402	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	10.2|2434233|36|NZ_CP014402|CRT	NZ_CP014402.1	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	94.44	36	2	0	1	36	2085941	2085976	433302-433402|672461-672553|848271-848356|855584-855671|891542-891623|997941-998223|1131612-1131699|2075174-2075252|2310237-2310387|2434154-2434347	5e-09	52.3	1.0	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA	2085941-2085976	TGCATTGTCTGTAGAATTTCCTTTCGAAATTCTCTA	2
NZ_CP014402	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	10.3|2434292|33|NZ_CP014402|CRT	NZ_CP014402.1	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	93.94	33	2	0	1	33	848337	848369	433302-433402|672461-672553|848271-848356|855584-855671|891542-891623|997941-998223|1131612-1131699|2075174-2075252|2310237-2310387|2434154-2434347	1e-07	47.5	1.0	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG	848337-848369	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
NZ_CP014402	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	10.3|2434292|33|NZ_CP014402|CRT	NZ_CP014402.1	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	93.94	33	2	0	1	33	1215975	1215943	433302-433402|672461-672553|848271-848356|855584-855671|891542-891623|997941-998223|1131612-1131699|2075174-2075252|2310237-2310387|2434154-2434347	1e-07	47.5	1.0	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG	1215943-1215975	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	2
NZ_CP014402	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	10.3|2434292|33|NZ_CP014402|CRT	NZ_CP014402.1	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	93.94	33	2	0	1	33	1424099	1424067	433302-433402|672461-672553|848271-848356|855584-855671|891542-891623|997941-998223|1131612-1131699|2075174-2075252|2310237-2310387|2434154-2434347	1e-07	47.5	1.0	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG	1424067-1424099	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	2
NZ_CP014402	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	10.3|2434292|33|NZ_CP014402|CRT	NZ_CP014402.1	Staphylococcus aureus strain USA300-SUR11 chromosome, complete genome	93.94	33	2	0	1	33	2710114	2710146	433302-433402|672461-672553|848271-848356|855584-855671|891542-891623|997941-998223|1131612-1131699|2075174-2075252|2310237-2310387|2434154-2434347	1e-07	47.5	1.0	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG	2710114-2710146	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
