bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NZ_CP014438	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	3.1|843871|26|NZ_CP014438|CRISPRCasFinder	NZ_CP014438.1	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	96.15	26	1	0	1	26	806833	806808	428872-428972|668031-668123|843841-843926|887169-887250|993566-993848|1127238-1127325|2072557-2072635|2307680-2307830|2431598-2431791	1e-05	39.6	1.0	CCGCCAGCTTCTGTGTTGGGGCCCCG	806808-806833	CGGGGCCCCAACACAGAAGCAGGCGG	1
NZ_CP014438	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	3.1|843871|26|NZ_CP014438|CRISPRCasFinder	NZ_CP014438.1	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	96.15	26	1	0	1	26	2872899	2872924	428872-428972|668031-668123|843841-843926|887169-887250|993566-993848|1127238-1127325|2072557-2072635|2307680-2307830|2431598-2431791	1e-05	39.6	1.0	CCGCCAGCTTCTGTGTTGGGGCCCCG	2872899-2872924	CCGCCAGCTTCTTTGTTGGGGCCCCG	1
NZ_CP014438	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	3.1|843871|26|NZ_CP014438|CRISPRCasFinder	NZ_CP014438.1	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	96.15	26	1	0	1	26	2872955	2872980	428872-428972|668031-668123|843841-843926|887169-887250|993566-993848|1127238-1127325|2072557-2072635|2307680-2307830|2431598-2431791	1e-05	39.6	1.0	CCGCCAGCTTCTGTGTTGGGGCCCCG	2872955-2872980	CCGCCAGCTTCTTTGTTGGGGCCCCG	1
NZ_CP014438	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	3.1|843871|26|NZ_CP014438|CRISPRCasFinder	NZ_CP014438.1	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	92.31	26	2	0	1	26	806889	806864	428872-428972|668031-668123|843841-843926|887169-887250|993566-993848|1127238-1127325|2072557-2072635|2307680-2307830|2431598-2431791	1e-04	36.5	1.0	CCGCCAGCTTCTGTGTTGGGGCCCCG	806864-806889	CGGGGCCCCAACATAGAAGCAGGCGG	2
NZ_CP014438	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	3.1|843871|26|NZ_CP014438|CRISPRCasFinder	NZ_CP014438.1	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	92.31	26	2	0	1	26	993565	993540	428872-428972|668031-668123|843841-843926|887169-887250|993566-993848|1127238-1127325|2072557-2072635|2307680-2307830|2431598-2431791	1e-04	36.5	1.0	CCGCCAGCTTCTGTGTTGGGGCCCCG	993540-993565	CGGGGCCCCAACACAGAGGCTGGTGG	2
NZ_CP014438	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	4.1|887193|34|NZ_CP014438|CRISPRCasFinder	NZ_CP014438.1	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	100.00	34	0	0	1	34	1419772	1419739	428872-428972|668031-668123|843841-843926|887169-887250|993566-993848|1127238-1127325|2072557-2072635|2307680-2307830|2431598-2431791	5e-10	55.5	1.0	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	1419739-1419772	ATGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	0
NZ_CP014438	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	4.1|887193|34|NZ_CP014438|CRISPRCasFinder	NZ_CP014438.1	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	100.00	34	0	0	1	34	1508931	1508964	428872-428972|668031-668123|843841-843926|887169-887250|993566-993848|1127238-1127325|2072557-2072635|2307680-2307830|2431598-2431791	5e-10	55.5	1.0	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	1508931-1508964	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	0
NZ_CP014438	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	5.1|993596|26|NZ_CP014438|CRT	NZ_CP014438.1	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	96.15	26	1	0	1	26	993540	993565	428872-428972|668031-668123|843841-843926|887169-887250|993566-993848|1127238-1127325|2072557-2072635|2307680-2307830|2431598-2431791	1e-05	39.6	1.0	CGGGGCCCCAACACAGAGGCTGGCGG	993540-993565	CGGGGCCCCAACACAGAGGCTGGTGG	1
NZ_CP014438	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	5.1|993596|26|NZ_CP014438|CRT	NZ_CP014438.1	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	92.31	26	2	0	1	26	806808	806833	428872-428972|668031-668123|843841-843926|887169-887250|993566-993848|1127238-1127325|2072557-2072635|2307680-2307830|2431598-2431791	1e-04	36.5	1.0	CGGGGCCCCAACACAGAGGCTGGCGG	806808-806833	CGGGGCCCCAACACAGAAGCAGGCGG	2
NZ_CP014438	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	5.1|993596|26|NZ_CP014438|CRT	NZ_CP014438.1	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	92.31	26	2	0	1	26	2872924	2872899	428872-428972|668031-668123|843841-843926|887169-887250|993566-993848|1127238-1127325|2072557-2072635|2307680-2307830|2431598-2431791	1e-04	36.5	1.0	CGGGGCCCCAACACAGAGGCTGGCGG	2872899-2872924	CCGCCAGCTTCTTTGTTGGGGCCCCG	2
NZ_CP014438	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	5.1|993596|26|NZ_CP014438|CRT	NZ_CP014438.1	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	92.31	26	2	0	1	26	2872980	2872955	428872-428972|668031-668123|843841-843926|887169-887250|993566-993848|1127238-1127325|2072557-2072635|2307680-2307830|2431598-2431791	1e-04	36.5	1.0	CGGGGCCCCAACACAGAGGCTGGCGG	2872955-2872980	CCGCCAGCTTCTTTGTTGGGGCCCCG	2
NZ_CP014438	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	5.3|993710|26|NZ_CP014438|CRT	NZ_CP014438.1	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	96.15	26	1	0	1	26	843952	843927	428872-428972|668031-668123|843841-843926|887169-887250|993566-993848|1127238-1127325|2072557-2072635|2307680-2307830|2431598-2431791	1e-05	39.6	1.0	CGGGGCCCCAACACAGAAGCTGGCGA	843927-843952	TCGTCAGCTTCTGTGTTGGGGCCCCG	1
NZ_CP014438	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	5.3|993710|26|NZ_CP014438|CRT	NZ_CP014438.1	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	92.31	26	2	0	1	26	390205	390230	428872-428972|668031-668123|843841-843926|887169-887250|993566-993848|1127238-1127325|2072557-2072635|2307680-2307830|2431598-2431791	1e-04	36.5	1.0	CGGGGCCCCAACACAGAAGCTGGCGA	390205-390230	CGGGGCCCCAACAAAGAAGCTGACGA	2
NZ_CP014438	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	7.1|2072580|33|NZ_CP014438|CRISPRCasFinder	NZ_CP014438.1	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	96.97	33	1	0	1	33	843907	843939	428872-428972|668031-668123|843841-843926|887169-887250|993566-993848|1127238-1127325|2072557-2072635|2307680-2307830|2431598-2431791	1e-08	50.7	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	843907-843939	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	1
NZ_CP014438	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	7.1|2072580|33|NZ_CP014438|CRISPRCasFinder	NZ_CP014438.1	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	96.97	33	1	0	1	33	1211601	1211569	428872-428972|668031-668123|843841-843926|887169-887250|993566-993848|1127238-1127325|2072557-2072635|2307680-2307830|2431598-2431791	1e-08	50.7	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	1211569-1211601	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	1
NZ_CP014438	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	7.1|2072580|33|NZ_CP014438|CRISPRCasFinder	NZ_CP014438.1	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	96.97	33	1	0	1	33	1419726	1419694	428872-428972|668031-668123|843841-843926|887169-887250|993566-993848|1127238-1127325|2072557-2072635|2307680-2307830|2431598-2431791	1e-08	50.7	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	1419694-1419726	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	1
NZ_CP014438	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	7.1|2072580|33|NZ_CP014438|CRISPRCasFinder	NZ_CP014438.1	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	96.97	33	1	0	1	33	1737495	1737527	428872-428972|668031-668123|843841-843926|887169-887250|993566-993848|1127238-1127325|2072557-2072635|2307680-2307830|2431598-2431791	1e-08	50.7	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	1737495-1737527	CATTATAGTAAGCTGACTTTTCGTCAGCTTCTG	1
NZ_CP014438	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	7.1|2072580|33|NZ_CP014438|CRISPRCasFinder	NZ_CP014438.1	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	96.97	33	1	0	1	33	2707549	2707581	428872-428972|668031-668123|843841-843926|887169-887250|993566-993848|1127238-1127325|2072557-2072635|2307680-2307830|2431598-2431791	1e-08	50.7	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	2707549-2707581	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	1
NZ_CP014438	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	7.1|2072580|33|NZ_CP014438|CRISPRCasFinder	NZ_CP014438.1	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	93.94	33	2	0	1	33	1508977	1509009	428872-428972|668031-668123|843841-843926|887169-887250|993566-993848|1127238-1127325|2072557-2072635|2307680-2307830|2431598-2431791	1e-07	47.5	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	1508977-1509009	CATTATTGTAAGCTGACTTTTCGTCATCTTCTG	2
NZ_CP014438	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	9.1|2431621|33|NZ_CP014438|CRT	NZ_CP014438.1	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	93.94	33	2	0	1	33	843907	843939	428872-428972|668031-668123|843841-843926|887169-887250|993566-993848|1127238-1127325|2072557-2072635|2307680-2307830|2431598-2431791	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	843907-843939	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
NZ_CP014438	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	9.1|2431621|33|NZ_CP014438|CRT	NZ_CP014438.1	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	93.94	33	2	0	1	33	1211601	1211569	428872-428972|668031-668123|843841-843926|887169-887250|993566-993848|1127238-1127325|2072557-2072635|2307680-2307830|2431598-2431791	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	1211569-1211601	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	2
NZ_CP014438	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	9.1|2431621|33|NZ_CP014438|CRT	NZ_CP014438.1	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	93.94	33	2	0	1	33	1419726	1419694	428872-428972|668031-668123|843841-843926|887169-887250|993566-993848|1127238-1127325|2072557-2072635|2307680-2307830|2431598-2431791	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	1419694-1419726	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	2
NZ_CP014438	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	9.1|2431621|33|NZ_CP014438|CRT	NZ_CP014438.1	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	93.94	33	2	0	1	33	1508977	1509009	428872-428972|668031-668123|843841-843926|887169-887250|993566-993848|1127238-1127325|2072557-2072635|2307680-2307830|2431598-2431791	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	1508977-1509009	CATTATTGTAAGCTGACTTTTCGTCATCTTCTG	2
NZ_CP014438	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	9.1|2431621|33|NZ_CP014438|CRT	NZ_CP014438.1	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	93.94	33	2	0	1	33	2707549	2707581	428872-428972|668031-668123|843841-843926|887169-887250|993566-993848|1127238-1127325|2072557-2072635|2307680-2307830|2431598-2431791	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	2707549-2707581	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
NZ_CP014438	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	9.2|2431677|36|NZ_CP014438|CRT	NZ_CP014438.1	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	100.00	36	0	0	1	36	1211548	1211513	428872-428972|668031-668123|843841-843926|887169-887250|993566-993848|1127238-1127325|2072557-2072635|2307680-2307830|2431598-2431791	6e-11	58.6	1.0	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA	1211513-1211548	TAGAGAATTTCAAAAAGAAATTCTACAGACAATGCA	0
NZ_CP014438	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	9.2|2431677|36|NZ_CP014438|CRT	NZ_CP014438.1	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	97.22	36	1	0	1	36	1915982	1915947	428872-428972|668031-668123|843841-843926|887169-887250|993566-993848|1127238-1127325|2072557-2072635|2307680-2307830|2431598-2431791	5e-10	55.5	1.0	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA	1915947-1915982	TAGAGAATTTCGAAAAGAAATTCTACAGACAATGCA	1
NZ_CP014438	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	9.2|2431677|36|NZ_CP014438|CRT	NZ_CP014438.1	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	94.44	36	2	0	1	36	1737434	1737469	428872-428972|668031-668123|843841-843926|887169-887250|993566-993848|1127238-1127325|2072557-2072635|2307680-2307830|2431598-2431791	5e-09	52.3	1.0	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA	1737434-1737469	TGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTA	2
NZ_CP014438	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	9.2|2431677|36|NZ_CP014438|CRT	NZ_CP014438.1	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	94.44	36	2	0	1	36	2083383	2083418	428872-428972|668031-668123|843841-843926|887169-887250|993566-993848|1127238-1127325|2072557-2072635|2307680-2307830|2431598-2431791	5e-09	52.3	1.0	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA	2083383-2083418	TGCATTGTCTGTAGAATTTCCTTTCGAAATTCTCTA	2
NZ_CP014438	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	9.3|2431736|33|NZ_CP014438|CRT	NZ_CP014438.1	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	93.94	33	2	0	1	33	843907	843939	428872-428972|668031-668123|843841-843926|887169-887250|993566-993848|1127238-1127325|2072557-2072635|2307680-2307830|2431598-2431791	1e-07	47.5	1.0	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG	843907-843939	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
NZ_CP014438	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	9.3|2431736|33|NZ_CP014438|CRT	NZ_CP014438.1	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	93.94	33	2	0	1	33	1211601	1211569	428872-428972|668031-668123|843841-843926|887169-887250|993566-993848|1127238-1127325|2072557-2072635|2307680-2307830|2431598-2431791	1e-07	47.5	1.0	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG	1211569-1211601	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	2
NZ_CP014438	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	9.3|2431736|33|NZ_CP014438|CRT	NZ_CP014438.1	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	93.94	33	2	0	1	33	1419726	1419694	428872-428972|668031-668123|843841-843926|887169-887250|993566-993848|1127238-1127325|2072557-2072635|2307680-2307830|2431598-2431791	1e-07	47.5	1.0	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG	1419694-1419726	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	2
NZ_CP014438	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	9.3|2431736|33|NZ_CP014438|CRT	NZ_CP014438.1	Staphylococcus aureus strain USA300-SUR22 chromosome, complete genome	93.94	33	2	0	1	33	2707549	2707581	428872-428972|668031-668123|843841-843926|887169-887250|993566-993848|1127238-1127325|2072557-2072635|2307680-2307830|2431598-2431791	1e-07	47.5	1.0	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG	2707549-2707581	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
