The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP019509	Aquaspirillum sp. LM1 chromosome, complete genome	3962240	124574	179186	3962240	plate,tail,transposase	Bacillus_virus(27.27%)	46	NA	NA
WP_150125050.1|124574_128558_-|plate	baseplate J/gp47 family protein	plate	NA	NA	NA	NA
WP_077296005.1|128535_128967_-	GPW/gp25 family protein	NA	NA	NA	NA	NA
WP_077296006.1|128970_129273_-	PAAR domain-containing protein	NA	NA	NA	NA	NA
WP_171982066.1|129289_131080_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA	NA
WP_171982067.1|131085_131748_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171982068.1|131770_131935_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077296008.1|131938_132385_-|tail	phage tail protein	tail	NA	NA	NA	NA
WP_077296009.1|132387_132843_-|tail	phage tail protein	tail	A0A059XP41	uncultured_phage	45.1	3.1e-23
WP_077296010.1|132865_134500_-|tail	phage tail sheath family protein	tail	J9PVC2	Bacillus_phage	33.3	2.6e-16
WP_150125051.1|134805_135132_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077296012.1|135158_135641_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077296013.1|135986_136916_-	CysB family HTH-type transcriptional regulator	NA	NA	NA	NA	NA
WP_077296014.1|137250_138897_+	MCP four helix bundle domain-containing protein	NA	NA	NA	NA	NA
WP_077296015.1|139253_143141_+	EAL domain-containing protein	NA	G3MA91	Bacillus_virus	36.4	1.7e-24
WP_077296016.1|143040_143556_-	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	30.0	1.1e-05
WP_077296017.1|143636_144863_-|transposase	transposase	transposase	A0A1B0VCD8	Salmonella_phage	59.1	2.1e-130
WP_077296018.1|145170_146154_+	taurine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_077296019.1|146166_146958_+	taurine ABC transporter ATP-binding subunit	NA	G3M9Y6	Bacillus_virus	40.0	2.7e-30
WP_077296020.1|146954_147791_+	taurine ABC transporter permease TauC	NA	NA	NA	NA	NA
WP_077296021.1|147867_148701_+	taurine dioxygenase	NA	NA	NA	NA	NA
WP_077296022.1|149063_149390_+	multidrug efflux SMR transporter	NA	NA	NA	NA	NA
WP_077296023.1|149630_150584_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_077296024.1|151304_151847_-	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_077296025.1|151843_152515_-	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_077296026.1|152535_153534_-	phosphotransferase	NA	NA	NA	NA	NA
WP_077296027.1|153630_155886_+	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_077296028.1|155882_157160_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
WP_077296029.1|157163_158147_+	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA	NA
WP_077296030.1|158341_162196_+	FAD/FMN-binding oxidoreductase	NA	NA	NA	NA	NA
WP_077296031.1|162457_163522_+	AAA family ATPase	NA	A0A077SLJ9	Escherichia_phage	26.4	1.3e-11
WP_077296032.1|163518_164202_+	DUF4276 family protein	NA	NA	NA	NA	NA
WP_077302527.1|164198_164621_+	HIT family protein	NA	NA	NA	NA	NA
WP_077296033.1|164751_165627_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_171982069.1|165673_168571_+	cache domain-containing protein	NA	A0A127AWB9	Bacillus_phage	37.0	1.9e-17
WP_077296035.1|168642_170400_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_077296036.1|170590_170944_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_077296037.1|170965_171448_+	arsenate reductase ArsC	NA	A0A2H4J8A6	uncultured_Caudovirales_phage	55.1	1.1e-39
WP_077296038.1|171583_172093_+	arsenate reductase ArsC	NA	A0A2H4J8A6	uncultured_Caudovirales_phage	40.4	1.5e-23
WP_077302529.1|172225_173293_+	ACR3 family arsenite efflux transporter	NA	NA	NA	NA	NA
WP_150125053.1|173282_173477_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077296040.1|173695_174166_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150125054.1|174448_175345_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_077296041.1|175348_175981_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_077296042.1|176091_177000_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_150125257.1|177374_178124_+	DUF4157 domain-containing protein	NA	NA	NA	NA	NA
WP_077296044.1|178196_179186_-|transposase	IS5 family transposase	transposase	E5E3P6	Burkholderia_phage	59.9	6.1e-109
>prophage 2
NZ_CP019509	Aquaspirillum sp. LM1 chromosome, complete genome	3962240	809596	889058	3962240	tRNA,protease,transposase	Bacillus_virus(21.43%)	58	NA	NA
WP_077296911.1|809596_810826_+|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_077296913.1|810828_811713_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_077296915.1|811788_812943_+	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
WP_077296917.1|812969_814265_+	adenylosuccinate synthase	NA	A0A0B5J049	Pandoravirus	32.1	1.1e-57
WP_077296919.1|814378_815536_-	PLP-dependent transferase	NA	NA	NA	NA	NA
WP_077296921.1|815532_816045_-	OsmC family protein	NA	NA	NA	NA	NA
WP_077296923.1|816157_816982_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.8	8.3e-27
WP_077296925.1|816989_817826_-	ABC transporter permease	NA	G3M9Y4	Bacillus_virus	25.1	6.5e-19
WP_077296927.1|818090_819329_+|transposase	transposase	transposase	A0A1B0VCD8	Salmonella_phage	59.4	2.6e-133
WP_077296928.1|819546_819948_-	RcnB family protein	NA	NA	NA	NA	NA
WP_077296930.1|819939_829023_+	cyclic beta 1-2 glucan synthetase	NA	NA	NA	NA	NA
WP_077296932.1|829019_830672_+	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_171982101.1|830607_833070_+	phosphoketolase family protein	NA	NA	NA	NA	NA
WP_077296934.1|833198_833378_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077296936.1|833374_833581_+	CsbD family protein	NA	NA	NA	NA	NA
WP_077296938.1|834108_834426_+	BON domain-containing protein	NA	NA	NA	NA	NA
WP_077296940.1|834544_835090_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077296942.1|835206_835665_+	PRC-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_077296944.1|835747_835966_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_077296946.1|836089_836539_+	Spy/CpxP family protein refolding chaperone	NA	NA	NA	NA	NA
WP_077296948.1|836593_837043_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_077302638.1|837039_838677_-	SagB/ThcOx family dehydrogenase	NA	NA	NA	NA	NA
WP_077296950.1|838725_840090_-	(Fe-S)-binding protein	NA	NA	NA	NA	NA
WP_077296952.1|840626_842048_+	circularly permuted type 2 ATP-grasp protein	NA	NA	NA	NA	NA
WP_077296954.1|842144_843113_+	alpha-E domain-containing protein	NA	NA	NA	NA	NA
WP_077296956.1|843162_846513_+	transglutaminase family protein	NA	NA	NA	NA	NA
WP_077296958.1|846616_849172_+	circularly permuted type 2 ATP-grasp protein	NA	NA	NA	NA	NA
WP_077296960.1|849165_850077_+	transglutaminase family protein	NA	NA	NA	NA	NA
WP_077296962.1|850230_850899_+	energy-coupling factor ABC transporter permease	NA	NA	NA	NA	NA
WP_077296964.1|851115_851544_+	MAPEG family protein	NA	NA	NA	NA	NA
WP_171982102.1|851516_852416_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171982103.1|852746_853700_+	DMT family transporter	NA	NA	NA	NA	NA
WP_077296970.1|853794_856227_-	cadmium-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	30.9	1.2e-76
WP_077296972.1|856631_857276_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_150125264.1|857652_860466_-	DEAD/DEAH box helicase	NA	A0A160DHD3	Gordonia_phage	27.1	9.1e-33
WP_150125090.1|861092_861623_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077296978.1|861637_863221_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150125091.1|863190_865206_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077296982.1|865222_865933_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077296984.1|865972_867181_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A077SL42	Escherichia_phage	63.2	3.0e-142
WP_077302640.1|867995_869099_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	44.5	4.9e-83
WP_077296986.1|869160_869346_+	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA	NA
WP_077296988.1|869431_870715_+	MFS transporter	NA	NA	NA	NA	NA
WP_077296992.1|870962_871901_+	nucleoside recognition family protein	NA	NA	NA	NA	NA
WP_077302642.1|871960_875449_-	chromosome segregation protein SMC	NA	NA	NA	NA	NA
WP_077296994.1|875544_876105_+	YqgE/AlgH family protein	NA	NA	NA	NA	NA
WP_077296996.1|876097_876556_+	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_171982104.1|876979_878041_+	S8 family serine peptidase	NA	NA	NA	NA	NA
WP_150125092.1|878231_878594_-|transposase	transposase	transposase	A0A1W6JP07	Morganella_phage	73.7	8.1e-35
WP_077297002.1|878785_879157_+	thioredoxin fold domain-containing protein	NA	A0A1X9I9P5	Staphylococcus_phage	40.7	4.6e-09
WP_077297004.1|879245_880472_+	multidrug effflux MFS transporter	NA	NA	NA	NA	NA
WP_077297006.1|880457_881330_-	EamA family transporter	NA	NA	NA	NA	NA
WP_077297008.1|881485_882793_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.8	1.9e-73
WP_077297010.1|882801_883443_+	Eco29kI family restriction endonuclease	NA	NA	NA	NA	NA
WP_077297012.1|883445_884561_+	DNA cytosine methyltransferase	NA	F2Y148	Organic_Lake_phycodnavirus	28.5	3.5e-28
WP_077297018.1|885139_886414_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	54.0	2.3e-100
WP_077297020.1|886627_887920_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_077297022.1|888068_889058_+|transposase	IS5 family transposase	transposase	E5E3P6	Burkholderia_phage	59.9	4.7e-109
>prophage 3
NZ_CP019509	Aquaspirillum sp. LM1 chromosome, complete genome	3962240	1423888	1484090	3962240	tRNA,protease,transposase	Flavobacterium_phage(12.5%)	47	NA	NA
WP_077297810.1|1423888_1425235_-|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_077297812.1|1425231_1426407_-	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_077297814.1|1426417_1427224_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_171982126.1|1427232_1427994_-	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	37.0	5.5e-17
WP_077297816.1|1428121_1428679_-	ribosome recycling factor	NA	NA	NA	NA	NA
WP_077297818.1|1428743_1429463_-	UMP kinase	NA	NA	NA	NA	NA
WP_077297820.1|1429658_1430543_-	elongation factor Ts	NA	NA	NA	NA	NA
WP_077297822.1|1430671_1431415_-	30S ribosomal protein S2	NA	NA	NA	NA	NA
WP_077297824.1|1431567_1431774_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171982057.1|1432416_1432929_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077297826.1|1433639_1433948_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077297828.1|1434275_1435139_+	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA	NA
WP_150125121.1|1435153_1436002_+	putative selenate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_077297832.1|1436321_1436918_+	LysE family translocator	NA	NA	NA	NA	NA
WP_077297834.1|1437006_1438431_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_077297836.1|1438468_1440772_-	RNA-binding transcriptional accessory protein	NA	NA	NA	NA	NA
WP_077297838.1|1441024_1442488_-	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	33.1	8.6e-51
WP_077297840.1|1442637_1443114_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077297842.1|1443452_1444331_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_077297844.1|1444721_1445027_+	DUF485 domain-containing protein	NA	NA	NA	NA	NA
WP_077297846.1|1445027_1446701_+	cation acetate symporter	NA	NA	NA	NA	NA
WP_077297848.1|1446776_1448741_+	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	39.6	6.1e-92
WP_171982127.1|1448894_1454033_-	SDR family NAD(P)-dependent oxidoreductase	NA	D0R7J2	Paenibacillus_phage	33.9	3.1e-26
WP_171982128.1|1454078_1456571_-	pentapeptide repeat-containing protein	NA	NA	NA	NA	NA
WP_171982129.1|1456575_1457256_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077297854.1|1457277_1458528_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077297856.1|1458524_1458947_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077297858.1|1458961_1462990_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171982090.1|1463704_1464931_+|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
WP_077297860.1|1465320_1466307_+|transposase	IS5 family transposase	transposase	E5E3P6	Burkholderia_phage	59.4	1.3e-106
WP_171982130.1|1466874_1467867_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_077297864.1|1468139_1469372_+	spore maturation protein	NA	NA	NA	NA	NA
WP_077297866.1|1469670_1471635_+	methyl-accepting chemotaxis protein	NA	NA	NA	NA	NA
WP_077297868.1|1471726_1472029_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_150125123.1|1472128_1472266_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077302702.1|1472392_1473667_+|transposase	transposase	transposase	A0A1B0VCD8	Salmonella_phage	57.7	6.4e-135
WP_077297870.1|1473691_1474069_+	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_077297872.1|1474219_1474489_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077297874.1|1474721_1475108_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077297876.1|1475453_1478090_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	38.5	1.7e-81
WP_077302704.1|1478144_1479494_-	deoxyguanosinetriphosphate triphosphohydrolase	NA	NA	NA	NA	NA
WP_077302706.1|1479519_1480170_-	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_077297878.1|1480361_1480643_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_077297880.1|1480632_1480947_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_150125124.1|1481093_1481447_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077297882.1|1481582_1482806_-|transposase	IS110 family transposase	transposase	Q9JMN8	Wolbachia_phage	28.8	7.7e-37
WP_077297545.1|1482953_1484090_+|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP019509	Aquaspirillum sp. LM1 chromosome, complete genome	3962240	1783797	1870743	3962240	transposase	Salmonella_phage(25.0%)	59	NA	NA
WP_077298335.1|1783797_1785006_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A077SL42	Escherichia_phage	63.0	8.8e-142
WP_171982152.1|1785598_1785736_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150125145.1|1785838_1788937_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077298339.1|1789398_1793034_+	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_150125146.1|1793139_1793406_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077298343.1|1793464_1794658_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_150125147.1|1794777_1795656_-	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA	NA
WP_077298347.1|1795870_1796308_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171982153.1|1796304_1797246_-	Nudix family hydrolase	NA	NA	NA	NA	NA
WP_077298350.1|1797288_1798167_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_077298352.1|1798266_1798932_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_077298354.1|1798960_1799638_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_077298356.1|1799816_1807400_-	VCBS repeat-containing protein	NA	NA	NA	NA	NA
WP_077298358.1|1807802_1808942_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_077298360.1|1808938_1810090_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_077298362.1|1810337_1812401_+	ribonuclease E	NA	NA	NA	NA	NA
WP_077298364.1|1812439_1814374_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	25.6	3.5e-15
WP_077298365.1|1814381_1815404_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_171982154.1|1815404_1816739_-	TolC family protein	NA	NA	NA	NA	NA
WP_077298369.1|1817449_1818748_+	calcium-binding protein	NA	NA	NA	NA	NA
WP_077297545.1|1818987_1820124_-|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
WP_171982155.1|1820699_1822544_+	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	32.6	1.3e-08
WP_077302746.1|1822546_1823578_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_077298373.1|1823574_1824348_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	27.7	4.3e-09
WP_077298375.1|1824375_1825005_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA	NA
WP_077298377.1|1824998_1826288_+	cobyrinate a,c-diamide synthase	NA	NA	NA	NA	NA
WP_077298379.1|1826281_1827244_+	cobalamin biosynthesis protein	NA	NA	NA	NA	NA
WP_077298381.1|1827234_1828272_+	threonine-phosphate decarboxylase	NA	A0A1X7QHI1	Faustovirus	33.0	3.0e-05
WP_077298383.1|1828296_1828659_-	metal-sensitive transcriptional regulator	NA	NA	NA	NA	NA
WP_077298385.1|1828603_1828813_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_077298387.1|1828900_1831255_-	cadmium-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	38.7	7.0e-111
WP_077298389.1|1831840_1832857_+|transposase	IS481 family transposase	transposase	A0A0M3LR35	Mannheimia_phage	23.7	7.7e-06
WP_077298391.1|1833019_1833322_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150125149.1|1833318_1833930_-	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_077298393.1|1833931_1834783_-	pentapeptide repeat-containing protein	NA	NA	NA	NA	NA
WP_077298395.1|1835349_1836381_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_077298397.1|1836373_1837456_-	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	35.1	3.2e-18
WP_077298399.1|1837480_1838542_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_077302748.1|1838538_1840362_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_077298402.1|1840434_1841226_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_077302750.1|1841412_1841652_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
WP_077298404.1|1841644_1842541_+	polyprenyl synthetase family protein	NA	NA	NA	NA	NA
WP_077298406.1|1842555_1844436_+	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
WP_077298408.1|1844435_1845740_+	MgtC/SapB family protein	NA	NA	NA	NA	NA
WP_077298410.1|1845770_1847138_-	DNA repair protein RadA	NA	NA	NA	NA	NA
WP_077298412.1|1847139_1848063_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_077298414.1|1848445_1849288_+	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
WP_077298416.1|1849450_1850857_+	MATE family efflux transporter	NA	NA	NA	NA	NA
WP_077298418.1|1850860_1851883_+	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA	NA
WP_077298420.1|1851973_1852663_-	RNA ligase family protein	NA	NA	NA	NA	NA
WP_077298422.1|1852668_1853211_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077302752.1|1854902_1856123_-|transposase	transposase	transposase	A0A1B0VCD8	Salmonella_phage	59.4	1.4e-134
WP_077298424.1|1856458_1860370_-	Dyp-type peroxidase	NA	NA	NA	NA	NA
WP_077298426.1|1860824_1861139_-	DUF3579 domain-containing protein	NA	NA	NA	NA	NA
WP_077298428.1|1861312_1863448_-	ATP-dependent DNA helicase DinG	NA	A0A127AW80	Bacillus_phage	25.9	3.1e-41
WP_171982156.1|1864415_1866746_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077298432.1|1866774_1868049_-|transposase	transposase	transposase	A0A1B0VCD8	Salmonella_phage	57.7	9.3e-134
WP_077298434.1|1868300_1869407_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_077298436.1|1869498_1870743_-|transposase	transposase	transposase	A0A1B0VCD8	Salmonella_phage	59.4	6.5e-140
>prophage 5
NZ_CP019509	Aquaspirillum sp. LM1 chromosome, complete genome	3962240	2787765	2793723	3962240	protease	Lake_Baikal_phage(33.33%)	6	NA	NA
WP_150125189.1|2787765_2788269_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	50.0	5.8e-15
WP_077299793.1|2788344_2790648_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	43.2	5.0e-170
WP_077299796.1|2790644_2790956_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	8.3e-12
WP_077299802.1|2791718_2791922_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	81.8	1.8e-23
WP_077299805.1|2792184_2792388_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	78.8	2.0e-22
WP_077299809.1|2792478_2793723_-	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	70.4	2.1e-13
>prophage 6
NZ_CP019509	Aquaspirillum sp. LM1 chromosome, complete genome	3962240	3207440	3265967	3962240	tail,tRNA,transposase	Saccharomonospora_phage(20.0%)	44	NA	NA
WP_077300848.1|3207440_3207728_+|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_077300851.1|3207775_3209224_+|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	tRNA	NA	NA	NA	NA
WP_077300854.1|3209273_3210707_+|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	tRNA	NA	NA	NA	NA
WP_150125215.1|3210846_3211089_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150125216.1|3211421_3211910_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_150125192.1|3211974_3213087_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_077302908.1|3216322_3217288_+	homocysteine S-methyltransferase	NA	NA	NA	NA	NA
WP_077302910.1|3217691_3218135_+	division/cell wall cluster transcriptional repressor MraZ	NA	NA	NA	NA	NA
WP_077300864.1|3218131_3219085_+	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA	NA	NA	NA	NA
WP_077300867.1|3219081_3219366_+	cell division protein FtsL	NA	NA	NA	NA	NA
WP_077300870.1|3219368_3221114_+	penicillin-binding protein 2	NA	NA	NA	NA	NA
WP_077300873.1|3221110_3222595_+	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase	NA	NA	NA	NA	NA
WP_077302912.1|3222599_3223973_+	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA	NA
WP_077300876.1|3224031_3225117_+	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA	NA
WP_077300879.1|3225129_3226500_+	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA	NA	NA	NA	NA
WP_150125297.1|3226514_3227675_+	putative lipid II flippase FtsW	NA	NA	NA	NA	NA
WP_171982225.1|3227679_3228747_+	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	NA	NA	NA	NA	NA
WP_077300882.1|3228846_3230238_+	UDP-N-acetylmuramate--L-alanine ligase	NA	NA	NA	NA	NA
WP_077300885.1|3230251_3231163_+	D-alanine--D-alanine ligase	NA	NA	NA	NA	NA
WP_077300889.1|3231152_3231893_+	FtsQ-type POTRA domain-containing protein	NA	NA	NA	NA	NA
WP_077300892.1|3231922_3233161_+	cell division protein FtsA	NA	NA	NA	NA	NA
WP_077300895.1|3233243_3234437_+	cell division protein FtsZ	NA	NA	NA	NA	NA
WP_077300898.1|3234641_3235556_+	UDP-3-O-acyl-N-acetylglucosamine deacetylase	NA	NA	NA	NA	NA
WP_077300901.1|3235564_3236086_+	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
WP_077300904.1|3236215_3237310_+|transposase	transposase	transposase	I4AZM3	Saccharomonospora_phage	40.4	5.3e-29
WP_077296059.1|3237391_3238381_+|transposase	IS5 family transposase	transposase	E5E3P6	Burkholderia_phage	59.6	1.4e-108
WP_077300907.1|3238553_3240794_-	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.2	2.8e-117
WP_077300910.1|3241027_3241897_-	DMT family transporter	NA	NA	NA	NA	NA
WP_077300914.1|3242051_3243515_-	GDL motif peptide-associated radical SAM/SPASM maturase	NA	NA	NA	NA	NA
WP_077300917.1|3243613_3244363_-	DUF1843 domain-containing protein	NA	NA	NA	NA	NA
WP_150125299.1|3244420_3245050_-	DUF1842 domain-containing protein	NA	NA	NA	NA	NA
WP_077300923.1|3245450_3245756_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_150125217.1|3246008_3246503_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077300929.1|3246750_3248019_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150125218.1|3248566_3248836_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077300935.1|3249689_3250370_+|tail	tail fiber protein	tail	A0A218MKA2	uncultured_virus	40.8	4.6e-07
WP_171982226.1|3250748_3256625_+	DUF4347 domain-containing protein	NA	NA	NA	NA	NA
WP_077302918.1|3258286_3259285_+	DUF4157 domain-containing protein	NA	NA	NA	NA	NA
WP_077300944.1|3260179_3260755_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_077300947.1|3261168_3261435_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077300950.1|3261491_3261893_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077300953.1|3262049_3264080_-	NADPH-dependent 2,4-dienoyl-CoA reductase	NA	NA	NA	NA	NA
WP_077300956.1|3264224_3264551_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_077302920.1|3264662_3265967_+|transposase	transposase	transposase	A0A1B0VCD8	Salmonella_phage	58.2	8.0e-133
>prophage 7
NZ_CP019509	Aquaspirillum sp. LM1 chromosome, complete genome	3962240	3305831	3329964	3962240	transposase	Salmonella_phage(20.0%)	20	NA	NA
WP_077301034.1|3305831_3307076_+|transposase	transposase	transposase	A0A1B0VCD8	Salmonella_phage	59.9	1.1e-134
WP_077301038.1|3307229_3308120_+	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_077301041.1|3308175_3308967_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.3	7.0e-15
WP_077301044.1|3308953_3309907_-	iron ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	24.7	4.3e-11
WP_150125220.1|3309918_3310716_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_077301047.1|3310708_3311755_-	hemin-degrading factor	NA	NA	NA	NA	NA
WP_077301050.1|3311790_3313986_-	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA	NA
WP_077302926.1|3314141_3314333_-	hemin uptake protein HemP	NA	NA	NA	NA	NA
WP_077301053.1|3314478_3315426_-	DUF4351 domain-containing protein	NA	NA	NA	NA	NA
WP_171982230.1|3315627_3316692_-	DUF1513 domain-containing protein	NA	NA	NA	NA	NA
WP_077301059.1|3316681_3317719_-	imelysin family protein	NA	NA	NA	NA	NA
WP_077301062.1|3317772_3319173_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_171982231.1|3319342_3320482_-	iron-regulated protein	NA	NA	NA	NA	NA
WP_077301068.1|3320789_3321161_+	VOC family protein	NA	NA	NA	NA	NA
WP_077297545.1|3321371_3322508_+|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
WP_077301071.1|3322634_3323681_-|transposase	IS481 family transposase	transposase	A0A077SLK2	Escherichia_phage	73.3	3.5e-147
WP_077302928.1|3323772_3324882_-|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
WP_150125221.1|3325568_3327002_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077301077.1|3327500_3328607_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_077301079.1|3328740_3329964_-|transposase	IS110 family transposase	transposase	Q9JMN8	Wolbachia_phage	28.5	3.8e-36
>prophage 8
NZ_CP019509	Aquaspirillum sp. LM1 chromosome, complete genome	3962240	3610445	3718571	3962240	tRNA,integrase,transposase	Shigella_phage(10.53%)	76	3635697:3635715	3684311:3684329
WP_077301715.1|3610445_3611396_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	NA	NA	NA	NA
WP_077301719.1|3611416_3612451_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	NA	NA	NA	NA
WP_077302977.1|3612553_3612880_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A088CBP5	Shigella_phage	53.1	5.6e-19
WP_077301722.1|3612872_3613184_+	helix-turn-helix transcriptional regulator	NA	A0A088CD40	Shigella_phage	53.0	6.1e-15
WP_077301725.1|3613343_3614342_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	NA	NA	NA	NA
WP_077301728.1|3614362_3615349_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	NA	NA	NA	NA
WP_077301731.1|3615612_3615855_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_150125239.1|3615851_3616193_+	endoribonuclease MazF	NA	NA	NA	NA	NA
WP_171982244.1|3617148_3617733_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171982245.1|3617733_3619704_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077301740.1|3620108_3622436_-	calcium-binding protein	NA	NA	NA	NA	NA
WP_077301743.1|3622523_3626459_-	DUF4214 domain-containing protein	NA	F8TV35	EBPR_siphovirus	33.1	1.1e-10
WP_077301747.1|3626994_3627969_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	NA	NA	NA	NA
WP_077301753.1|3628326_3628629_+	type II toxin-antitoxin system MqsR family toxin	NA	NA	NA	NA	NA
WP_077301756.1|3628631_3629033_+	type II toxin-antitoxin system MqsA family antitoxin	NA	NA	NA	NA	NA
WP_077301759.1|3629208_3630522_-	FecR domain-containing protein	NA	NA	NA	NA	NA
WP_077301762.1|3630679_3631948_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_077301765.1|3632022_3633075_+|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	NA	NA	NA	NA
WP_077301768.1|3633128_3634133_+|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	NA	NA	NA	NA
WP_077301768.1|3634186_3635191_+|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	NA	NA	NA	NA
WP_077301771.1|3635210_3637052_-	adenylate/guanylate cyclase domain-containing protein	NA	A0A218MLZ2	uncultured_virus	23.2	7.1e-34
3635697:3635715	attL	GGCGGCGTCGGGCAGCGAC	NA	NA	NA	NA
WP_077301774.1|3637061_3638225_-	glycosyltransferase family 4 protein	NA	J7Q7I8	Aeropyrum_coil-shaped_virus	31.3	5.7e-05
WP_077301777.1|3638221_3638518_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077301780.1|3638514_3639327_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_150125240.1|3639336_3643905_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_077301786.1|3643897_3645121_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.8	4.6e-13
WP_077301789.1|3645120_3645915_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_077301792.1|3646066_3647500_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	30.8	2.1e-54
WP_077301795.1|3647504_3648479_-	GDP-mannose 4,6-dehydratase	NA	Q84439	Paramecium_bursaria_Chlorella_virus	52.6	3.9e-92
WP_077301799.1|3648582_3649488_+	GDP-mannose 4,6-dehydratase	NA	G8DDL6	Micromonas_pusilla_virus	26.2	6.8e-14
WP_077301802.1|3649728_3651558_+	type I secretion system permease/ATPase	NA	W8CYL7	Bacillus_phage	30.5	5.4e-26
WP_077301806.1|3651579_3652959_+	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_171982246.1|3652961_3654365_+	TolC family outer membrane protein	NA	NA	NA	NA	NA
WP_077301812.1|3654444_3654996_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	51.5	3.5e-45
WP_077301815.1|3654992_3655865_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	34.3	2.3e-27
WP_077301818.1|3656165_3657164_+|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	NA	NA	NA	NA
WP_077301821.1|3657528_3659514_+	transketolase	NA	NA	NA	NA	NA
WP_077301824.1|3659584_3660595_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_077301827.1|3660691_3661864_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_077301830.1|3661929_3662451_+	SgcJ/EcaC family oxidoreductase	NA	NA	NA	NA	NA
WP_077301833.1|3662479_3663103_+	LysE family translocator	NA	NA	NA	NA	NA
WP_077301836.1|3663291_3664356_+	fructose-bisphosphate aldolase class II	NA	NA	NA	NA	NA
WP_171982247.1|3664482_3665700_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A221SAN4	Ralstonia_phage	31.9	7.0e-38
WP_077301842.1|3665790_3666087_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_150125241.1|3666297_3668478_+	calcium-binding protein	NA	NA	NA	NA	NA
WP_171982248.1|3668847_3670074_-|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
WP_077301853.1|3671465_3671978_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077298762.1|3672120_3673104_+|transposase	IS481 family transposase	transposase	A0A0M3LR35	Mannheimia_phage	23.7	7.4e-06
WP_150125243.1|3673157_3674234_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077301859.1|3674230_3674914_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171982249.1|3675032_3676184_-	porin	NA	NA	NA	NA	NA
WP_077301865.1|3676463_3676964_+	homoprotocatechuate degradation operon regulator HpaR	NA	NA	NA	NA	NA
WP_077301868.1|3677267_3678179_-|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	40.2	4.3e-08
WP_077301871.1|3678229_3678736_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	40.5	4.8e-17
WP_077301874.1|3679004_3680075_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_171982250.1|3680639_3685256_+	DUF4214 domain-containing protein	NA	NA	NA	NA	NA
3684311:3684329	attR	GTCGCTGCCCGACGCCGCC	NA	NA	NA	NA
WP_077301880.1|3685559_3692159_+	DUF4347 domain-containing protein	NA	NA	NA	NA	NA
WP_171982251.1|3692298_3698013_+	DUF4347 domain-containing protein	NA	NA	NA	NA	NA
WP_171982252.1|3698039_3698519_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_171982274.1|3698893_3699973_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_077301892.1|3699976_3703102_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_077301895.1|3703098_3704520_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_077301898.1|3704732_3706151_+	aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_077301900.1|3706769_3707075_-	DUF2325 domain-containing protein	NA	NA	NA	NA	NA
WP_077301903.1|3707230_3707818_-	malonic semialdehyde reductase	NA	NA	NA	NA	NA
WP_077301906.1|3708035_3708251_-	TOBE domain-containing protein	NA	NA	NA	NA	NA
WP_150125304.1|3708306_3709110_-	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	33.2	4.5e-25
WP_077301911.1|3709126_3709918_-	aliphatic sulfonate ABC transporter permease SsuC	NA	NA	NA	NA	NA
WP_077301914.1|3709914_3711045_-	FMNH2-dependent alkanesulfonate monooxygenase	NA	NA	NA	NA	NA
WP_077302979.1|3711103_3712042_-	sulfonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_077301917.1|3712078_3712675_-	NADPH-dependent FMN reductase	NA	NA	NA	NA	NA
WP_077301920.1|3713265_3713478_+	CsbD family protein	NA	NA	NA	NA	NA
WP_077301923.1|3713549_3714281_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_150125244.1|3714462_3714609_+	lmo0937 family membrane protein	NA	NA	NA	NA	NA
WP_077301925.1|3714603_3716247_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	29.8	8.0e-29
WP_150125245.1|3717365_3718571_+|transposase	transposase	transposase	A0A1B0VCD8	Salmonella_phage	59.0	7.9e-135
