The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP019870	Clostridioides difficile strain BR81 chromosome, complete genome	4124384	934187	943140	4124384		Catovirus(50.0%)	8	NA	NA
WP_009897935.1|934187_935027_+	glycosyltransferase family 2 protein	NA	A0A2P1ELT8	Moumouvirus	26.3	7.0e-05
WP_009891031.1|935041_936217_+	CDP-glycerol glycerophosphotransferase family protein	NA	NA	NA	NA	NA
WP_003422862.1|936245_936995_+	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	38.8	1.2e-16
WP_004454111.1|937016_937925_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_003426498.1|937972_938725_+	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	40.5	4.6e-16
WP_169460753.1|938702_940046_+	nucleotide sugar dehydrogenase	NA	A0A127AXI2	Bacillus_phage	43.6	2.3e-90
WP_003431768.1|940051_941143_+	glycosyltransferase	NA	A0A1V0SL50	Klosneuvirus	26.2	1.8e-16
WP_009897930.1|941226_943140_+	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	29.8	1.1e-26
>prophage 2
NZ_CP019870	Clostridioides difficile strain BR81 chromosome, complete genome	4124384	1565726	1583831	4124384		Streptococcus_phage(81.82%)	16	NA	NA
WP_021369030.1|1565726_1567121_+	cell division protein FtsK	NA	A0A1S5SFB5	Streptococcus_phage	65.3	2.6e-174
WP_164662466.1|1567322_1568522_+	replication initiation factor domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	61.3	2.8e-140
WP_003436853.1|1568528_1568663_+	DUF3789 domain-containing protein	NA	NA	NA	NA	NA
WP_003436850.1|1569404_1571315_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	29.4	6.4e-38
WP_003436839.1|1571481_1571643_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	83.0	4.4e-17
WP_003437701.1|1571723_1572101_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_022621734.1|1572207_1572504_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009902328.1|1572422_1572926_+	antirestriction protein ArdA	NA	NA	NA	NA	NA
WP_009902330.1|1572943_1573447_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	59.6	4.9e-54
WP_011861948.1|1573567_1573966_+	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	73.0	2.4e-48
WP_009902335.1|1573943_1576394_+	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	76.3	0.0e+00
WP_021369033.1|1576393_1578589_+	YtxH domain-containing protein	NA	A0A1S5SF30	Streptococcus_phage	60.6	1.5e-184
WP_021369027.1|1578585_1579590_+	bifunctional lysozyme/C40 family peptidase	NA	A0A1S5SEZ8	Streptococcus_phage	69.3	4.0e-132
WP_021378259.1|1579609_1580512_+	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	51.2	3.2e-80
WP_021369143.1|1580655_1581267_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_021378256.1|1581263_1583831_+	pyruvate phosphate dikinase PEP/pyruvate-binding domain protein	NA	A0A1V0SGR7	Hokovirus	38.9	1.6e-47
>prophage 3
NZ_CP019870	Clostridioides difficile strain BR81 chromosome, complete genome	4124384	2260817	2271053	4124384	transposase	Clostridium_phage(33.33%)	8	NA	NA
WP_004454529.1|2260817_2263577_-	calcium-translocating P-type ATPase, PMCA-type	NA	A0A1J0FA34	Only_Syngen_Nebraska_virus	29.6	1.1e-91
WP_003430074.1|2263566_2264196_-	TerD family protein	NA	K4JRX3	Caulobacter_phage	33.8	1.1e-26
WP_004454531.1|2264281_2264860_-	TerD family protein	NA	NA	NA	NA	NA
WP_003420269.1|2264898_2265477_-	TerD family protein	NA	A0A0S4KZ16	Pseudomonas_phage	36.9	2.1e-16
WP_016729235.1|2265836_2267000_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A0A8WI33	Clostridium_phage	98.7	5.0e-219
WP_003435056.1|2266996_2267395_-|transposase	IS200/IS605 family transposase	transposase	A0A0A8WIU6	Clostridium_phage	96.2	2.5e-69
WP_003436430.1|2267650_2269087_+	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA	NA
WP_003436426.1|2269178_2271053_-	asparagine synthase (glutamine-hydrolyzing)	NA	A0A2P1ELF7	Moumouvirus	30.1	4.7e-25
>prophage 4
NZ_CP019870	Clostridioides difficile strain BR81 chromosome, complete genome	4124384	2474452	2484179	4124384		Pandoravirus(37.5%)	11	NA	NA
WP_003429425.1|2474452_2475619_-	RNA polymerase sigma factor RpoD	NA	M4SMP8	Cyanophage	36.8	9.6e-37
WP_009896376.1|2475636_2477427_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	32.6	1.2e-51
WP_003419887.1|2477681_2478467_-	3-deoxy-7-phosphoheptulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	27.9	1.7e-13
WP_003438641.1|2478447_2478954_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	S4VNV0	Pandoravirus	35.2	1.2e-12
WP_009889257.1|2478946_2479312_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_003438639.1|2479322_2480114_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	28.8	1.1e-23
WP_003429416.1|2480177_2480750_-	GTP cyclohydrolase I FolE	NA	E7DN69	Pneumococcus_phage	51.6	3.0e-44
WP_003438637.1|2480775_2481477_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003438634.1|2481510_2482254_-	aminotransferase class IV	NA	NA	NA	NA	NA
WP_003438631.1|2482243_2483593_-	aminodeoxychorismate synthase component I	NA	S4VNU7	Pandoravirus	41.2	2.2e-37
WP_003438628.1|2483594_2484179_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	52.6	1.1e-57
>prophage 5
NZ_CP019870	Clostridioides difficile strain BR81 chromosome, complete genome	4124384	2565601	2611079	4124384	tail,portal,plate,integrase	Clostridium_phage(50.0%)	47	2562157:2562173	2621689:2621705
2562157:2562173	attL	AAAGAAGATATATTAAA	NA	NA	NA	NA
WP_003428144.1|2565601_2566000_+	helix-turn-helix domain-containing protein	NA	A0A1L2JY18	Aeribacillus_phage	29.7	2.7e-07
WP_009889160.1|2566216_2566426_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003428146.1|2566457_2566667_-	helix-turn-helix transcriptional regulator	NA	Q5YAA3	Bacillus_phage	47.2	5.9e-06
WP_003438466.1|2566965_2567385_+	helix-turn-helix transcriptional regulator	NA	S5MUV6	Brevibacillus_phage	37.2	5.4e-06
WP_003419674.1|2567612_2568068_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003438465.1|2568288_2568549_-	hypothetical protein	NA	A0A0A8WE78	Clostridium_phage	91.6	6.4e-34
WP_003438464.1|2568811_2569165_-	hypothetical protein	NA	A0A0A8WJF2	Clostridium_phage	42.1	1.6e-11
WP_003438453.1|2569181_2574503_-	hypothetical protein	NA	A0A0A8WEY5	Clostridium_phage	37.4	7.8e-118
WP_003438452.1|2574519_2575503_-|tail	phage tail protein	tail	A0A2H4J039	uncultured_Caudovirales_phage	47.8	6.4e-58
WP_003438451.1|2575503_2576202_-	DUF2313 domain-containing protein	NA	A0A090D815	Clostridium_phage	56.9	5.5e-48
WP_003438450.1|2576198_2577251_-|plate	baseplate J/gp47 family protein	plate	A0A0A8WFP3	Clostridium_phage	71.0	2.7e-139
WP_003438449.1|2577243_2577672_-	DUF2634 domain-containing protein	NA	A0A0A8WJ32	Clostridium_phage	82.4	4.4e-64
WP_003438447.1|2577671_2577998_-	DUF2577 family protein	NA	J9QE86	Clostridium_phage	94.4	1.0e-52
WP_003438440.1|2578013_2579543_-	C40 family peptidase	NA	A0A1V0DZX6	Clostridioides_phage	81.1	2.2e-243
WP_003428168.1|2579824_2580247_-	hypothetical protein	NA	A0A090DBR9	Clostridium_phage	71.1	1.7e-52
WP_003438437.1|2580246_2582700_-	hypothetical protein	NA	A0A1V0DZX3	Clostridioides_phage	55.7	6.1e-17
WP_003419648.1|2582699_2582867_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003419647.1|2582893_2583340_-|portal	phage portal protein	portal	A0A090EUD0	Clostridium_phage	36.0	8.2e-13
WP_003419646.1|2583453_2583882_-|tail	phage tail tube protein	tail	A0A1V0DZX1	Clostridioides_phage	51.8	2.8e-34
WP_003438414.1|2583895_2584960_-|tail	phage tail sheath subtilisin-like domain-containing protein	tail	A0A1V0DZX4	Clostridioides_phage	52.8	7.6e-97
WP_003438413.1|2584964_2585408_-	hypothetical protein	NA	A0A1V0DZX9	Clostridioides_phage	35.4	3.8e-18
WP_003428183.1|2585656_2586097_-	hypothetical protein	NA	A0A090EUN5	Clostridium_phage	51.4	6.0e-32
WP_003419641.1|2586201_2586399_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003428185.1|2586567_2586888_+	XRE family transcriptional regulator	NA	A0A0A8WE28	Clostridium_phage	54.5	3.7e-23
WP_003428186.1|2586969_2587476_+	hypothetical protein	NA	A0A0A8WEK1	Clostridium_phage	67.1	4.0e-56
WP_009889131.1|2588176_2588932_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
WP_009889129.1|2589074_2589503_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003419624.1|2589923_2590124_-	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	66.2	2.7e-16
WP_003438399.1|2590306_2591476_-	amidase domain-containing protein	NA	NA	NA	NA	NA
WP_003438396.1|2591711_2592533_+	pyridoxamine kinase	NA	NA	NA	NA	NA
WP_021368953.1|2592608_2593997_-	two-component system sensor histidine kinase	NA	NA	NA	NA	NA
WP_021363441.1|2594131_2594890_-	lantibiotic immunity ABC transporter MutG family permease subunit	NA	NA	NA	NA	NA
WP_003438387.1|2594891_2595608_-	lantibiotic immunity ABC transporter MutE/EpiE family permease subunit	NA	NA	NA	NA	NA
WP_016729592.1|2595609_2596317_-	lantibiotic protection ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	48.9	4.3e-56
WP_003428196.1|2596432_2596969_-	lipoprotein	NA	NA	NA	NA	NA
WP_003438380.1|2597070_2598141_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_003438377.1|2598133_2599192_-	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_009889116.1|2599178_2599511_-	PadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003438374.1|2599709_2600831_+	galactosyldiacylglycerol synthase	NA	NA	NA	NA	NA
WP_003428202.1|2600958_2602857_-	glutamine synthetase	NA	NA	NA	NA	NA
WP_003438370.1|2603171_2603948_+	exonuclease domain-containing protein	NA	NA	NA	NA	NA
WP_003438367.1|2604039_2604792_-	exodeoxyribonuclease III	NA	E3T4M6	Cafeteria_roenbergensis_virus	45.6	1.9e-57
WP_003438360.1|2604952_2605903_-	galactose-1-phosphate uridylyltransferase	NA	NA	NA	NA	NA
WP_003438357.1|2606287_2607484_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_003419561.1|2607818_2608271_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003438353.1|2608581_2610027_-	adenylosuccinate lyase	NA	NA	NA	NA	NA
WP_009889110.1|2610170_2611079_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
2621689:2621705	attR	TTTAATATATCTTCTTT	NA	NA	NA	NA
>prophage 6
NZ_CP019870	Clostridioides difficile strain BR81 chromosome, complete genome	4124384	3496187	3512252	4124384		Streptococcus_phage(85.71%)	18	NA	NA
WP_021378142.1|3496187_3497075_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	30.3	2.3e-22
WP_021378141.1|3497071_3497698_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_021378154.1|3497838_3498750_-	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	48.2	2.3e-78
WP_021378140.1|3498767_3499778_-	lysozyme family protein	NA	A0A1S5SEZ8	Streptococcus_phage	66.5	9.6e-126
WP_021378147.1|3499774_3501877_-	membrane protein	NA	A0A1S5SF30	Streptococcus_phage	71.5	3.0e-174
WP_021378160.1|3501939_3504390_-	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	74.0	0.0e+00
WP_032513869.1|3504376_3504766_-	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	69.8	3.2e-45
WP_078051035.1|3504851_3505355_-	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	61.2	8.3e-54
WP_021378156.1|3505371_3505857_-	antirestriction family protein	NA	A0A1S5SF25	Streptococcus_phage	32.4	3.1e-13
WP_032513868.1|3505853_3506075_-	hypothetical protein	NA	NA	NA	NA	NA
WP_078051036.1|3506173_3506935_-	iron-sulfur protein	NA	NA	NA	NA	NA
WP_032513866.1|3507008_3507230_-	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	89.0	6.9e-29
WP_021378164.1|3507230_3507374_-	DUF3789 domain-containing protein	NA	NA	NA	NA	NA
WP_074141888.1|3507357_3508584_-	XRE family transcriptional regulator	NA	A0A1S5SEX3	Streptococcus_phage	58.6	4.6e-138
WP_021378134.1|3508851_3510249_-	cell division protein FtsK	NA	A0A1S5SFB5	Streptococcus_phage	64.6	2.3e-170
WP_032513863.1|3510266_3510635_-	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	75.5	1.3e-43
WP_032513861.1|3510651_3510975_-	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	74.5	4.1e-38
WP_102135717.1|3511175_3512252_-	DNA cytosine methyltransferase	NA	A0A2K9V3X0	Faecalibacterium_phage	61.7	2.0e-28
>prophage 7
NZ_CP019870	Clostridioides difficile strain BR81 chromosome, complete genome	4124384	3770409	3779055	4124384	transposase	Synechococcus_phage(33.33%)	9	NA	NA
WP_003436063.1|3770409_3771942_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	E3SNU8	Prochlorococcus_phage	49.7	2.3e-38
WP_003436064.1|3771934_3772528_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.4	4.3e-25
WP_003425286.1|3772521_3773598_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	R9TMC7	Synechococcus_phage	42.2	1.7e-64
WP_003425288.1|3773591_3774959_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.0	2.6e-49
WP_003420966.1|3774970_3775669_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3F9V5	Synechococcus_phage	43.9	1.5e-45
WP_003425290.1|3775674_3776151_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	45.8	6.9e-26
WP_003436071.1|3776600_3777113_+	nitroreductase family protein	NA	A0A1V0E011	Clostridioides_phage	87.1	7.8e-84
WP_003435058.1|3777496_3778660_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A0A8WI33	Clostridium_phage	99.0	1.7e-219
WP_003435056.1|3778656_3779055_-|transposase	IS200/IS605 family transposase	transposase	A0A0A8WIU6	Clostridium_phage	96.2	2.5e-69
