assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002009175.1_ASM200917v1	NZ_CP018047	Streptomyces niveus strain SCSIO 3406 chromosome, complete genome	1	21443-21838	1,1,1	CRT,CRISPRCasFinder,PILER-CR	no	c2c9_V-U4	c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	Type V-U4	GGTCGCTCCCCGNGCGTACGGACCGGAC,CGGTCGCTCCCCGTGCGTACGGACCGGAC,CGGTCGCTCCCCGTGCGTACGGACCGGAC	28,29,29	0	0	NA	NA	NA:NA:NA	6,5,4	6	TypeV-U4	c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	NA|271aa|up_9|NZ_CP018047.1_11012_11825_+,NA|105aa|up_8|NZ_CP018047.1_12119_12434_-,NA|285aa|up_7|NZ_CP018047.1_12765_13620_+,NA|268aa|up_5|NZ_CP018047.1_14383_15187_+,NA|163aa|up_4|NZ_CP018047.1_15290_15779_+,NA|352aa|down_1|NZ_CP018047.1_23936_24992_+,NA|246aa|down_2|NZ_CP018047.1_24991_25729_+,NA|174aa|down_3|NZ_CP018047.1_25725_26247_+,NA|94aa|down_4|NZ_CP018047.1_26336_26618_+	NA|271aa|up_9|NZ_CP018047.1_11012_11825_+	NA	NA|105aa|up_8|NZ_CP018047.1_12119_12434_-	NA	NA|285aa|up_7|NZ_CP018047.1_12765_13620_+	NA	NA|257aa|up_6|NZ_CP018047.1_13616_14387_+	pfam03771, SPDY, Domain of unknown function (DUF317)	NA|268aa|up_5|NZ_CP018047.1_14383_15187_+	NA	NA|163aa|up_4|NZ_CP018047.1_15290_15779_+	NA	NA|430aa|up_3|NZ_CP018047.1_16997_18287_+	pfam00145, DNA_methylase, C-5 cytosine-specific DNA methylase	NA|371aa|up_2|NZ_CP018047.1_18286_19399_+	pfam00772, DnaB, DnaB-like helicase N terminal domain	NA|460aa|up_1|NZ_CP018047.1_19464_20844_+	pfam03771, SPDY, Domain of unknown function (DUF317)	NA|118aa|up_0|NZ_CP018047.1_21026_21380_+	pfam02467, Whib, Transcription factor WhiB	c2c9_V-U4|124aa|down_0|NZ_CP018047.1_21856_22228_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|352aa|down_1|NZ_CP018047.1_23936_24992_+	NA	NA|246aa|down_2|NZ_CP018047.1_24991_25729_+	NA	NA|174aa|down_3|NZ_CP018047.1_25725_26247_+	NA	NA|94aa|down_4|NZ_CP018047.1_26336_26618_+	NA	NA|421aa|down_5|NZ_CP018047.1_26712_27975_+	pfam02945, Endonuclease_7, Recombination endonuclease VII	NA|297aa|down_6|NZ_CP018047.1_28406_29297_-	COG3586, COG3586, Uncharacterized conserved protein [Function unknown]	NA|376aa|down_7|NZ_CP018047.1_30123_31251_-	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|347aa|down_8|NZ_CP018047.1_31386_32427_-	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|427aa|down_9|NZ_CP018047.1_32392_33673_-	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily
GCF_002009175.1_ASM200917v1	NZ_CP018047	Streptomyces niveus strain SCSIO 3406 chromosome, complete genome	2	1284213-1284428	2	CRISPRCasFinder	no		c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	Orphan	TTCAAGCCGTCCGGCGATTGAGGACAC	27	0	0	NA	NA	NA	3	3	Orphan	c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	NA,NA|198aa|down_1|NZ_CP018047.1_1285139_1285733_-	NA|322aa|up_9|NZ_CP018047.1_1270312_1271278_-	cd07025, Peptidase_S66, LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein	NA|672aa|up_8|NZ_CP018047.1_1271274_1273290_-	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]	NA|466aa|up_7|NZ_CP018047.1_1273302_1274700_-	PRK07906, PRK07906, hypothetical protein; Provisional	NA|278aa|up_6|NZ_CP018047.1_1274692_1275526_-	cd08663, DAP_dppA_1, Peptidase M55, D-aminopeptidase dipeptide-binding protein family	NA|240aa|up_5|NZ_CP018047.1_1275741_1276461_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|818aa|up_4|NZ_CP018047.1_1276515_1278969_-	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE)	NA|825aa|up_3|NZ_CP018047.1_1279139_1281614_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|153aa|up_2|NZ_CP018047.1_1281883_1282342_-	pfam10604, Polyketide_cyc2, Polyketide cyclase / dehydrase and lipid transport	NA|346aa|up_1|NZ_CP018047.1_1282472_1283510_+	TIGR04470, hypothetical_protein_ALIPUT_00462, radical SAM mobile pair protein B	NA|169aa|up_0|NZ_CP018047.1_1283532_1284039_+	cd02908, Macro_OAADPr_deacetylase, macrodomain, O-acetyl-ADP-ribose (OAADPr) family	NA|177aa|down_0|NZ_CP018047.1_1284625_1285156_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|198aa|down_1|NZ_CP018047.1_1285139_1285733_-	NA	NA|597aa|down_2|NZ_CP018047.1_1286182_1287973_+	COG1250, FadB, 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]	NA|280aa|down_3|NZ_CP018047.1_1288071_1288911_+	TIGR03968, transcriptional_regulator_TetR_family, mycofactocin system transcriptional regulator	NA|446aa|down_4|NZ_CP018047.1_1289417_1290755_+	TIGR01751, crotonyl_CoA_reductase, crotonyl-CoA carboxylase/reductase	NA|684aa|down_5|NZ_CP018047.1_1290756_1292808_+	cd03681, MM_CoA_mutase_MeaA, Coenzyme B12-dependent-methylmalonyl coenzyme A (CoA) mutase (MCM) family, MeaA-like subfamily; contains various methylmalonyl coenzyme A (CoA) mutase (MCM)-like proteins similar to the Streptomyces cinnamonensis MeaA, Methylobacterium extorquens MeaA and Streptomyces collinus B12-dependent mutase	NA|331aa|down_6|NZ_CP018047.1_1292804_1293797_+	COG2301, CitE, Citrate lyase beta subunit [Carbohydrate transport and metabolism]	NA|171aa|down_7|NZ_CP018047.1_1293800_1294313_+	cd03451, FkbR2, FkbR2 is a Streptomyces hygroscopicus protein with a hot dog fold that belongs to a conserved family of proteins found in prokaryotes and archaea but not in eukaryotes	NA|402aa|down_8|NZ_CP018047.1_1294316_1295522_+	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases	NA|216aa|down_9|NZ_CP018047.1_1295691_1296339_+	PRK05305, PRK05305, phosphatidylserine decarboxylase family protein
GCF_002009175.1_ASM200917v1	NZ_CP018047	Streptomyces niveus strain SCSIO 3406 chromosome, complete genome	3	1538611-1538810	3	CRISPRCasFinder	no	DEDDh	c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	Unclear	TGTCCTCAAACGCCGGACGGGCT	23	0	0	NA	NA	NA	3	3	Orphan	c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	NA,NA|94aa|down_8|NZ_CP018047.1_1549642_1549924_-	NA|262aa|up_9|NZ_CP018047.1_1525562_1526348_-	smart00650, rADc, Ribosomal RNA adenine dimethylases	NA|139aa|up_8|NZ_CP018047.1_1526743_1527160_+	cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA and similar domains	NA|451aa|up_7|NZ_CP018047.1_1527211_1528564_-	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold	NA|280aa|up_6|NZ_CP018047.1_1528563_1529403_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|317aa|up_5|NZ_CP018047.1_1529399_1530350_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|296aa|up_4|NZ_CP018047.1_1530531_1531419_+	pfam01636, APH, Phosphotransferase enzyme family	DEDDh|241aa|up_3|NZ_CP018047.1_1531470_1532193_-	PRK07942, PRK07942, DNA polymerase III subunit epsilon; Provisional	NA|411aa|up_2|NZ_CP018047.1_1532305_1533538_-	pfam18725, HEPN_SAV2148, SAV2148-like HEPN	NA|708aa|up_1|NZ_CP018047.1_1533937_1536061_+	TIGR02100, Glycogen_operon_protein_GlgX_homolog, glycogen debranching enzyme GlgX	NA|781aa|up_0|NZ_CP018047.1_1536250_1538593_+	TIGR02401, Putative_maltooligosyl_trehalose_synthase, malto-oligosyltrehalose synthase	NA|183aa|down_0|NZ_CP018047.1_1539054_1539603_-	pfam00498, FHA, FHA domain	NA|321aa|down_1|NZ_CP018047.1_1539728_1540691_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|584aa|down_2|NZ_CP018047.1_1540805_1542557_+	TIGR02402, Malto-oligosyltrehalose_trehalohydrolase, malto-oligosyltrehalose trehalohydrolase	NA|328aa|down_3|NZ_CP018047.1_1542665_1543649_+	cd19081, AKR_AKR9C1, AKR9C family of aldo-keto reductase (AKR)	NA|874aa|down_4|NZ_CP018047.1_1544268_1546890_-	PRK06241, PRK06241, phosphoenolpyruvate synthase; Validated	NA|324aa|down_5|NZ_CP018047.1_1547136_1548108_-	PRK13668, PRK13668, hypothetical protein; Provisional	NA|220aa|down_6|NZ_CP018047.1_1548276_1548936_-	PRK09270, PRK09270, nucleoside triphosphate hydrolase domain-containing protein; Reviewed	NA|130aa|down_7|NZ_CP018047.1_1549250_1549640_+	cd07263, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|94aa|down_8|NZ_CP018047.1_1549642_1549924_-	NA	NA|482aa|down_9|NZ_CP018047.1_1550085_1551531_-	cd05642, M28_like, M28 Zn-peptidase-like; uncharacterized subfamily
GCF_002009175.1_ASM200917v1	NZ_CP018047	Streptomyces niveus strain SCSIO 3406 chromosome, complete genome	4	1549097-1549182	4	CRISPRCasFinder	no	DEDDh	c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	Unclear	ATCCAGCCCGTCCGGCGATTGAGGAC	26	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	NA,NA|94aa|down_1|NZ_CP018047.1_1549642_1549924_-	NA|411aa|up_9|NZ_CP018047.1_1532305_1533538_-	pfam18725, HEPN_SAV2148, SAV2148-like HEPN	NA|708aa|up_8|NZ_CP018047.1_1533937_1536061_+	TIGR02100, Glycogen_operon_protein_GlgX_homolog, glycogen debranching enzyme GlgX	NA|781aa|up_7|NZ_CP018047.1_1536250_1538593_+	TIGR02401, Putative_maltooligosyl_trehalose_synthase, malto-oligosyltrehalose synthase	NA|183aa|up_6|NZ_CP018047.1_1539054_1539603_-	pfam00498, FHA, FHA domain	NA|321aa|up_5|NZ_CP018047.1_1539728_1540691_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|584aa|up_4|NZ_CP018047.1_1540805_1542557_+	TIGR02402, Malto-oligosyltrehalose_trehalohydrolase, malto-oligosyltrehalose trehalohydrolase	NA|328aa|up_3|NZ_CP018047.1_1542665_1543649_+	cd19081, AKR_AKR9C1, AKR9C family of aldo-keto reductase (AKR)	NA|874aa|up_2|NZ_CP018047.1_1544268_1546890_-	PRK06241, PRK06241, phosphoenolpyruvate synthase; Validated	NA|324aa|up_1|NZ_CP018047.1_1547136_1548108_-	PRK13668, PRK13668, hypothetical protein; Provisional	NA|220aa|up_0|NZ_CP018047.1_1548276_1548936_-	PRK09270, PRK09270, nucleoside triphosphate hydrolase domain-containing protein; Reviewed	NA|130aa|down_0|NZ_CP018047.1_1549250_1549640_+	cd07263, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|94aa|down_1|NZ_CP018047.1_1549642_1549924_-	NA	NA|482aa|down_2|NZ_CP018047.1_1550085_1551531_-	cd05642, M28_like, M28 Zn-peptidase-like; uncharacterized subfamily	NA|152aa|down_3|NZ_CP018047.1_1551618_1552074_-	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains	NA|285aa|down_4|NZ_CP018047.1_1552235_1553090_+	pfam13560, HTH_31, Helix-turn-helix domain	NA|82aa|down_5|NZ_CP018047.1_1553086_1553332_+	pfam04149, DUF397, Domain of unknown function (DUF397)	NA|136aa|down_6|NZ_CP018047.1_1553395_1553803_-	pfam01641, SelR, SelR domain	NA|467aa|down_7|NZ_CP018047.1_1553813_1555214_-	PRK00421, murC, UDP-N-acetylmuramate--L-alanine ligase; Provisional	NA|255aa|down_8|NZ_CP018047.1_1555981_1556746_-	PRK14059, PRK14059, pyrimidine reductase family protein	NA|328aa|down_9|NZ_CP018047.1_1557602_1558586_+	COG1485, COG1485, Predicted ATPase [General function prediction only]
GCF_002009175.1_ASM200917v1	NZ_CP018047	Streptomyces niveus strain SCSIO 3406 chromosome, complete genome	5	1557126-1557470	2	PILER-CR	no		c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	Orphan	AGCCCGTCCGGCGATTGAGGAC	22	0	0	NA	NA	NA	4	4	Orphan	c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	NA|94aa|up_7|NZ_CP018047.1_1549642_1549924_-,NA|170aa|down_5|NZ_CP018047.1_1563716_1564226_-	NA|220aa|up_9|NZ_CP018047.1_1548276_1548936_-	PRK09270, PRK09270, nucleoside triphosphate hydrolase domain-containing protein; Reviewed	NA|130aa|up_8|NZ_CP018047.1_1549250_1549640_+	cd07263, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|94aa|up_7|NZ_CP018047.1_1549642_1549924_-	NA	NA|482aa|up_6|NZ_CP018047.1_1550085_1551531_-	cd05642, M28_like, M28 Zn-peptidase-like; uncharacterized subfamily	NA|152aa|up_5|NZ_CP018047.1_1551618_1552074_-	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains	NA|285aa|up_4|NZ_CP018047.1_1552235_1553090_+	pfam13560, HTH_31, Helix-turn-helix domain	NA|82aa|up_3|NZ_CP018047.1_1553086_1553332_+	pfam04149, DUF397, Domain of unknown function (DUF397)	NA|136aa|up_2|NZ_CP018047.1_1553395_1553803_-	pfam01641, SelR, SelR domain	NA|467aa|up_1|NZ_CP018047.1_1553813_1555214_-	PRK00421, murC, UDP-N-acetylmuramate--L-alanine ligase; Provisional	NA|255aa|up_0|NZ_CP018047.1_1555981_1556746_-	PRK14059, PRK14059, pyrimidine reductase family protein	NA|328aa|down_0|NZ_CP018047.1_1557602_1558586_+	COG1485, COG1485, Predicted ATPase [General function prediction only]	NA|142aa|down_1|NZ_CP018047.1_1558668_1559094_+	TIGR03562, osmo_induc_OsmC, peroxiredoxin, OsmC subfamily	NA|454aa|down_2|NZ_CP018047.1_1559282_1560644_+	pfam05787, DUF839, Bacterial protein of unknown function (DUF839)	NA|380aa|down_3|NZ_CP018047.1_1560752_1561892_-	pfam00089, Trypsin, Trypsin	NA|484aa|down_4|NZ_CP018047.1_1562091_1563543_-	cd03399, SPFH_flotillin, Flotillin or reggie family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|170aa|down_5|NZ_CP018047.1_1563716_1564226_-	NA	NA|280aa|down_6|NZ_CP018047.1_1564382_1565222_+	cd10955, CE4_BH0857_like, Putative catalytic NodB homology domain of uncharacterized BH0857 protein from Bacillus halodurans and its bacterial homologs	NA|225aa|down_7|NZ_CP018047.1_1565509_1566184_-	pfam01987, AIM24, Mitochondrial biogenesis AIM24	NA|278aa|down_8|NZ_CP018047.1_1566255_1567089_+	cd02430, PTH2, Peptidyl-tRNA hydrolase, type 2 (PTH2)	NA|264aa|down_9|NZ_CP018047.1_1567203_1567995_+	pfam13628, DUF4142, Domain of unknown function (DUF4142)
GCF_002009175.1_ASM200917v1	NZ_CP018047	Streptomyces niveus strain SCSIO 3406 chromosome, complete genome	6	1581379-1581472	5	CRISPRCasFinder	no		c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	Orphan	TTGGCCTCAATCGCCGGCCGGGCTTG	26	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	NA,NA|365aa|down_2|NZ_CP018047.1_1585456_1586551_-	NA|307aa|up_9|NZ_CP018047.1_1569584_1570505_+	TIGR04222, integral_membrane_protein, TIGR04222 domain	NA|547aa|up_8|NZ_CP018047.1_1570701_1572342_+	pfam08386, Abhydrolase_4, TAP-like protein	NA|239aa|up_7|NZ_CP018047.1_1572436_1573153_-	pfam06778, Chlor_dismutase, Chlorite dismutase	NA|486aa|up_6|NZ_CP018047.1_1573157_1574615_-	PRK11883, PRK11883, protoporphyrinogen oxidase; Reviewed	NA|319aa|up_5|NZ_CP018047.1_1574776_1575733_+	pfam14257, DUF4349, Domain of unknown function (DUF4349)	NA|461aa|up_4|NZ_CP018047.1_1575800_1577183_+	PRK09564, PRK09564, coenzyme A disulfide reductase; Reviewed	NA|364aa|up_3|NZ_CP018047.1_1577209_1578301_-	PRK00115, hemE, uroporphyrinogen decarboxylase; Validated	NA|225aa|up_2|NZ_CP018047.1_1578392_1579067_+	pfam11452, DUF3000, Protein of unknown function (DUF3000)	NA|220aa|up_1|NZ_CP018047.1_1579312_1579972_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|428aa|up_0|NZ_CP018047.1_1580059_1581343_+	COG0349, Rnd, Ribonuclease D [Translation, ribosomal structure and biogenesis]	NA|407aa|down_0|NZ_CP018047.1_1581807_1583028_+	TIGR01930, 3-ketoacyl-CoA_thiolase, acetyl-CoA acetyltransferases	NA|709aa|down_1|NZ_CP018047.1_1583024_1585151_+	PRK11730, fadB, fatty acid oxidation complex subunit alpha FadB	NA|365aa|down_2|NZ_CP018047.1_1585456_1586551_-	NA	NA|131aa|down_3|NZ_CP018047.1_1586716_1587109_+	cd10912, PIN_YacP-like, PIN_domain of Bacillus subtilis YacP/Rae1 and related proteins	NA|505aa|down_4|NZ_CP018047.1_1587084_1588599_-	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|501aa|down_5|NZ_CP018047.1_1588631_1590134_-	TIGR00909, putative_amino_acid_transporter, amino acid transporter	NA|646aa|down_6|NZ_CP018047.1_1590281_1592219_-	PRK12571, PRK12571, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	NA|431aa|down_7|NZ_CP018047.1_1592462_1593755_-	COG4214, XylH, ABC-type xylose transport system, permease component [Carbohydrate transport and metabolism]	NA|263aa|down_8|NZ_CP018047.1_1593751_1594540_-	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|355aa|down_9|NZ_CP018047.1_1594737_1595802_-	cd19995, PBP1_ABC_xylose_binding-like, periplasmic xylose-like sugar-binding component of the ABC-type transport systems
GCF_002009175.1_ASM200917v1	NZ_CP018047	Streptomyces niveus strain SCSIO 3406 chromosome, complete genome	7	3260725-3260792	6	CRISPRCasFinder	no		c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	Orphan	AAGCCCGTCCGACGATTGAGGAC	23	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	NA|33aa|up_2|NZ_CP018047.1_3259280_3259379_-,NA	NA|256aa|up_9|NZ_CP018047.1_3251779_3252547_-	PRK05472, PRK05472, redox-sensing transcriptional repressor Rex; Provisional	NA|92aa|up_8|NZ_CP018047.1_3252868_3253144_-	pfam05768, DUF836, Glutaredoxin-like domain (DUF836)	NA|315aa|up_7|NZ_CP018047.1_3253280_3254225_+	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|267aa|up_6|NZ_CP018047.1_3254534_3255335_+	TIGR02952, RNA_polymerase_sigma-70_factor_ECF_subfamily, RNA polymerase sigma-70 factor, TIGR02952 family	NA|405aa|up_5|NZ_CP018047.1_3255530_3256745_+	PRK14959, PRK14959, DNA polymerase III subunits gamma and tau; Provisional	NA|391aa|up_4|NZ_CP018047.1_3256839_3258012_-	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like	NA|346aa|up_3|NZ_CP018047.1_3258013_3259051_-	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs	NA|33aa|up_2|NZ_CP018047.1_3259280_3259379_-	NA	NA|71aa|up_1|NZ_CP018047.1_3259489_3259702_-	TIGR01764, Probable_excisionase, DNA binding domain, excisionase family	NA|272aa|up_0|NZ_CP018047.1_3259830_3260646_-	pfam15698, Phosphatase, Phosphatase	NA|391aa|down_0|NZ_CP018047.1_3260863_3262036_-	cd09994, HDAC_AcuC_like, Class I histone deacetylase AcuC (Acetoin utilization protein)-like enzymes	NA|417aa|down_1|NZ_CP018047.1_3262004_3263255_-	cd17393, MFS_MosC_like, Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of transporters	NA|215aa|down_2|NZ_CP018047.1_3263296_3263941_-	cd07526, HAD_BPGM_like, subfamily of beta-phosphoglucomutase-like family, similar to Escherichia coli 6-phosphogluconate phosphatase YieH	NA|333aa|down_3|NZ_CP018047.1_3269932_3270931_+	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|334aa|down_4|NZ_CP018047.1_3270897_3271899_-	PRK09393, ftrA, transcriptional activator FtrA; Provisional	NA|197aa|down_5|NZ_CP018047.1_3271974_3272565_+	cd01014, nicotinamidase_related, Nicotinamidase_ related amidohydrolases	NA|270aa|down_6|NZ_CP018047.1_3272587_3273397_-	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed	NA|271aa|down_7|NZ_CP018047.1_3273557_3274370_-	TIGR00025, Mtu_efflux, ABC transporter efflux protein, DrrB family	NA|258aa|down_8|NZ_CP018047.1_3274366_3275140_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|291aa|down_9|NZ_CP018047.1_3275344_3276217_-	PRK09636, PRK09636, RNA polymerase sigma factor SigJ; Provisional
GCF_002009175.1_ASM200917v1	NZ_CP018047	Streptomyces niveus strain SCSIO 3406 chromosome, complete genome	8	3485829-3486303	2	CRT	no		c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	Orphan	CCNNNGNNNNNNCCNCCGGANTNNCCNCCNC	31	1	1	3486172-3486206	NZ_CP018047.1_3486271-3486305	NA	7	7	Orphan	c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	NA,NA|146aa|down_1|NZ_CP018047.1_3490305_3490743_-,NA|107aa|down_9|NZ_CP018047.1_3496853_3497174_-	NA|234aa|up_9|NZ_CP018047.1_3473135_3473837_-	COG1802, GntR, Transcriptional regulators [Transcription]	NA|454aa|up_8|NZ_CP018047.1_3473971_3475333_-	PRK06062, PRK06062, hypothetical protein; Provisional	NA|199aa|up_7|NZ_CP018047.1_3475500_3476097_+	cd03140, GATase1_PfpI_3, Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus	NA|160aa|up_6|NZ_CP018047.1_3476474_3476954_+	pfam12802, MarR_2, MarR family	NA|684aa|up_5|NZ_CP018047.1_3477056_3479108_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|340aa|up_4|NZ_CP018047.1_3479145_3480165_+	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]	NA|157aa|up_3|NZ_CP018047.1_3480245_3480716_-	pfam18029, Glyoxalase_6, Glyoxalase-like domain	NA|192aa|up_2|NZ_CP018047.1_3480849_3481425_+	pfam13305, WHG, WHG domain	NA|395aa|up_1|NZ_CP018047.1_3481507_3482692_+	cd01844, SGNH_hydrolase_like_6, SGNH_hydrolase subfamily	NA|430aa|up_0|NZ_CP018047.1_3482889_3484179_+	COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton]	NA|903aa|down_0|NZ_CP018047.1_3487347_3490056_-	PHA00370, III, attachment protein	NA|146aa|down_1|NZ_CP018047.1_3490305_3490743_-	NA	NA|279aa|down_2|NZ_CP018047.1_3490899_3491736_+	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|79aa|down_3|NZ_CP018047.1_3491732_3491969_+	pfam04149, DUF397, Domain of unknown function (DUF397)	NA|399aa|down_4|NZ_CP018047.1_3491952_3493149_-	PRK07588, PRK07588, FAD-binding domain	NA|466aa|down_5|NZ_CP018047.1_3493145_3494543_-	cd17504, MFS_MMR_MDR_like, Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|211aa|down_6|NZ_CP018047.1_3494635_3495268_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|238aa|down_7|NZ_CP018047.1_3495316_3496030_-	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|147aa|down_8|NZ_CP018047.1_3496416_3496857_-	cd18695, PIN_VapC-like, uncharacterized subfamily of the VapC (virulence-associated protein C)-like family of the PIN domain superfamily	NA|107aa|down_9|NZ_CP018047.1_3496853_3497174_-	NA
GCF_002009175.1_ASM200917v1	NZ_CP018047	Streptomyces niveus strain SCSIO 3406 chromosome, complete genome	9	3544890-3544979	7	CRISPRCasFinder	no		c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	Orphan	CGGTGCAGTGGTCCACGAGGGCTC	24	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	NA,NA	NA|273aa|up_9|NZ_CP018047.1_3532010_3532829_-	cd09021, Aldose_epim_Ec_YphB, aldose 1-epimerase, similar to Escherichia coli YphB	NA|552aa|up_8|NZ_CP018047.1_3534667_3536323_-	PRK03612, PRK03612, polyamine aminopropyltransferase	NA|173aa|up_7|NZ_CP018047.1_3536429_3536948_-	pfam10936, DUF2617, Protein of unknown function DUF2617	NA|89aa|up_6|NZ_CP018047.1_3537261_3537528_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|406aa|up_5|NZ_CP018047.1_3537715_3538933_+	PRK07777, PRK07777, putative succinyldiaminopimelate transaminase DapC	NA|362aa|up_4|NZ_CP018047.1_3539289_3540375_+	COG5542, COG5542, Predicted integral membrane protein [Function unknown]	NA|183aa|up_3|NZ_CP018047.1_3540406_3540955_-	pfam10722, YbjN, Putative bacterial sensory transduction regulator	NA|888aa|up_2|NZ_CP018047.1_3541152_3543816_-	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB	NA|135aa|up_1|NZ_CP018047.1_3544000_3544405_+	TIGR03618, Rv1155_F420, PPOX class probable F420-dependent enzyme	NA|107aa|up_0|NZ_CP018047.1_3544554_3544875_-	cd03469, Rieske_RO_Alpha_N, Rieske non-heme iron oxygenase (RO) family, N-terminal Rieske domain of the oxygenase alpha subunit; The RO family comprise a large class of aromatic ring-hydroxylating dioxygenases found predominantly in microorganisms	NA|283aa|down_0|NZ_CP018047.1_3545318_3546167_+	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|330aa|down_1|NZ_CP018047.1_3546277_3547267_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|159aa|down_2|NZ_CP018047.1_3547345_3547822_-	cd01279, HTH_HspR-like, Helix-Turn-Helix DNA binding domain of HspR-like transcription regulators	NA|404aa|down_3|NZ_CP018047.1_3547827_3549039_-	PRK14295, PRK14295, molecular chaperone DnaJ	NA|227aa|down_4|NZ_CP018047.1_3549138_3549819_-	PRK14163, PRK14163, heat shock protein GrpE; Provisional	NA|621aa|down_5|NZ_CP018047.1_3549815_3551678_-	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|191aa|down_6|NZ_CP018047.1_3551922_3552495_+	pfam02397, Bac_transf, Bacterial sugar transferase	NA|757aa|down_7|NZ_CP018047.1_3552604_3554875_+	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion]	NA|371aa|down_8|NZ_CP018047.1_3555165_3556278_+	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	NA|321aa|down_9|NZ_CP018047.1_3556416_3557379_+	pfam04893, Yip1, Yip1 domain
GCF_002009175.1_ASM200917v1	NZ_CP018047	Streptomyces niveus strain SCSIO 3406 chromosome, complete genome	10	3565175-3565261	8	CRISPRCasFinder	no	DEDDh	c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	Unclear	GGGACCGAACGGGGACCGGTCCCCAAAAGC	30	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	NA|222aa|up_3|NZ_CP018047.1_3559283_3559949_-,NA|132aa|down_0|NZ_CP018047.1_3566038_3566434_+,NA|57aa|down_4|NZ_CP018047.1_3571055_3571226_-,NA|192aa|down_5|NZ_CP018047.1_3571421_3571997_-	NA|191aa|up_9|NZ_CP018047.1_3551922_3552495_+	pfam02397, Bac_transf, Bacterial sugar transferase	NA|757aa|up_8|NZ_CP018047.1_3552604_3554875_+	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion]	NA|371aa|up_7|NZ_CP018047.1_3555165_3556278_+	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	NA|321aa|up_6|NZ_CP018047.1_3556416_3557379_+	pfam04893, Yip1, Yip1 domain	NA|166aa|up_5|NZ_CP018047.1_3557428_3557926_-	COG2236, COG2236, Predicted phosphoribosyltransferases [General function prediction only]	NA|192aa|up_4|NZ_CP018047.1_3557931_3558507_-	PRK00416, dcd, deoxycytidine triphosphate deaminase; Reviewed	NA|222aa|up_3|NZ_CP018047.1_3559283_3559949_-	NA	NA|403aa|up_2|NZ_CP018047.1_3560044_3561253_-	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|89aa|up_1|NZ_CP018047.1_3561249_3561516_-	pfam12728, HTH_17, Helix-turn-helix domain	NA|305aa|up_0|NZ_CP018047.1_3562476_3563391_+	pfam13730, HTH_36, Helix-turn-helix domain	NA|132aa|down_0|NZ_CP018047.1_3566038_3566434_+	NA	NA|570aa|down_1|NZ_CP018047.1_3566430_3568140_+	pfam03432, Relaxase, Relaxase/Mobilisation nuclease domain	NA|190aa|down_2|NZ_CP018047.1_3568304_3568874_-	COG0262, FolA, Dihydrofolate reductase [Coenzyme metabolism]	NA|276aa|down_3|NZ_CP018047.1_3569333_3570161_-	pfam03771, SPDY, Domain of unknown function (DUF317)	NA|57aa|down_4|NZ_CP018047.1_3571055_3571226_-	NA	NA|192aa|down_5|NZ_CP018047.1_3571421_3571997_-	NA	DEDDh|201aa|down_6|NZ_CP018047.1_3572023_3572626_-	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family	NA|393aa|down_7|NZ_CP018047.1_3572622_3573801_-	TIGR04470, hypothetical_protein_ALIPUT_00462, radical SAM mobile pair protein B	NA|204aa|down_8|NZ_CP018047.1_3573797_3574409_-	PRK14544, PRK14544, nucleoside diphosphate kinase; Provisional	NA|340aa|down_9|NZ_CP018047.1_3574405_3575425_-	cd00351, TS_Pyrimidine_HMase, Thymidylate synthase and pyrimidine hydroxymethylase: Thymidylate synthase (TS) and deoxycytidylate hydroxymethylase (dCMP-HMase) are homologs that catalyze analogous alkylation of C5 of pyrimidine nucleotides
GCF_002009175.1_ASM200917v1	NZ_CP018047	Streptomyces niveus strain SCSIO 3406 chromosome, complete genome	11	3582072-3583212	3,9,3	PILER-CR,CRISPRCasFinder,CRT	no	DEDDh,cas3,cas5,cas7,cas6	c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	Unclear	GTTGCGAGCCCTCCAGGGCTGATGACGAC,GTTGCGAGCCCTCCAGGGCTGATGACGAC,GTTGCGAGCCCTCCAGGGCTGATGACGAC	29,29,29	0	0	NA	NA	NA:NA:NA	16,17,17	17	Unclear	c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	NA|100aa|up_8|NZ_CP018047.1_3575458_3575758_-,NA|370aa|up_7|NZ_CP018047.1_3575893_3577003_-,NA|59aa|up_6|NZ_CP018047.1_3577372_3577549_-,NA|51aa|up_5|NZ_CP018047.1_3577572_3577725_-,NA|92aa|up_4|NZ_CP018047.1_3577778_3578054_-,NA|432aa|up_3|NZ_CP018047.1_3578253_3579549_+,NA|463aa|down_3|NZ_CP018047.1_3588190_3589579_-,NA|125aa|down_5|NZ_CP018047.1_3595227_3595602_+	NA|340aa|up_9|NZ_CP018047.1_3574405_3575425_-	cd00351, TS_Pyrimidine_HMase, Thymidylate synthase and pyrimidine hydroxymethylase: Thymidylate synthase (TS) and deoxycytidylate hydroxymethylase (dCMP-HMase) are homologs that catalyze analogous alkylation of C5 of pyrimidine nucleotides	NA|100aa|up_8|NZ_CP018047.1_3575458_3575758_-	NA	NA|370aa|up_7|NZ_CP018047.1_3575893_3577003_-	NA	NA|59aa|up_6|NZ_CP018047.1_3577372_3577549_-	NA	NA|51aa|up_5|NZ_CP018047.1_3577572_3577725_-	NA	NA|92aa|up_4|NZ_CP018047.1_3577778_3578054_-	NA	NA|432aa|up_3|NZ_CP018047.1_3578253_3579549_+	NA	NA|200aa|up_2|NZ_CP018047.1_3579545_3580145_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|185aa|up_1|NZ_CP018047.1_3580494_3581049_+	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|193aa|up_0|NZ_CP018047.1_3581225_3581804_+	pfam13023, HD_3, HD domain	cas3|799aa|down_0|NZ_CP018047.1_3583965_3586362_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|224aa|down_1|NZ_CP018047.1_3586358_3587030_-	cd09693, Cas5_I, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|343aa|down_2|NZ_CP018047.1_3587159_3588188_-	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	NA|463aa|down_3|NZ_CP018047.1_3588190_3589579_-	NA	cas6|253aa|down_4|NZ_CP018047.1_3589575_3590334_-	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6	NA|125aa|down_5|NZ_CP018047.1_3595227_3595602_+	NA	NA|389aa|down_6|NZ_CP018047.1_3596111_3597278_-	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|71aa|down_7|NZ_CP018047.1_3597274_3597487_-	TIGR01764, Probable_excisionase, DNA binding domain, excisionase family	NA|422aa|down_8|NZ_CP018047.1_3598421_3599687_+	pfam12307, DUF3631, Protein of unknown function (DUF3631)	NA|246aa|down_9|NZ_CP018047.1_3600001_3600739_+	pfam10935, DUF2637, Protein of unknown function (DUF2637)
GCF_002009175.1_ASM200917v1	NZ_CP018047	Streptomyces niveus strain SCSIO 3406 chromosome, complete genome	12	3583229-3583719	4,4,10	CRT,PILER-CR,CRISPRCasFinder	no	DEDDh,cas3,cas5,cas7,cas6	c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	Unclear	GTTGCGAGCCCTCCAGGGCTGATGACGACCCNN,GTTGCGAGCCCTCCAGGGCTGATGACGAC,GTTGCGAGCCCTCCAGGGCTGATGACGAC	33,29,29	0	0	NA	NA	NA:NA:NA	7,4,4	7	Unclear	c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	NA|100aa|up_8|NZ_CP018047.1_3575458_3575758_-,NA|370aa|up_7|NZ_CP018047.1_3575893_3577003_-,NA|59aa|up_6|NZ_CP018047.1_3577372_3577549_-,NA|51aa|up_5|NZ_CP018047.1_3577572_3577725_-,NA|92aa|up_4|NZ_CP018047.1_3577778_3578054_-,NA|432aa|up_3|NZ_CP018047.1_3578253_3579549_+,NA|463aa|down_3|NZ_CP018047.1_3588190_3589579_-,NA|125aa|down_5|NZ_CP018047.1_3595227_3595602_+	NA|340aa|up_9|NZ_CP018047.1_3574405_3575425_-	cd00351, TS_Pyrimidine_HMase, Thymidylate synthase and pyrimidine hydroxymethylase: Thymidylate synthase (TS) and deoxycytidylate hydroxymethylase (dCMP-HMase) are homologs that catalyze analogous alkylation of C5 of pyrimidine nucleotides	NA|100aa|up_8|NZ_CP018047.1_3575458_3575758_-	NA	NA|370aa|up_7|NZ_CP018047.1_3575893_3577003_-	NA	NA|59aa|up_6|NZ_CP018047.1_3577372_3577549_-	NA	NA|51aa|up_5|NZ_CP018047.1_3577572_3577725_-	NA	NA|92aa|up_4|NZ_CP018047.1_3577778_3578054_-	NA	NA|432aa|up_3|NZ_CP018047.1_3578253_3579549_+	NA	NA|200aa|up_2|NZ_CP018047.1_3579545_3580145_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|185aa|up_1|NZ_CP018047.1_3580494_3581049_+	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|193aa|up_0|NZ_CP018047.1_3581225_3581804_+	pfam13023, HD_3, HD domain	cas3|799aa|down_0|NZ_CP018047.1_3583965_3586362_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|224aa|down_1|NZ_CP018047.1_3586358_3587030_-	cd09693, Cas5_I, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|343aa|down_2|NZ_CP018047.1_3587159_3588188_-	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	NA|463aa|down_3|NZ_CP018047.1_3588190_3589579_-	NA	cas6|253aa|down_4|NZ_CP018047.1_3589575_3590334_-	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6	NA|125aa|down_5|NZ_CP018047.1_3595227_3595602_+	NA	NA|389aa|down_6|NZ_CP018047.1_3596111_3597278_-	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|71aa|down_7|NZ_CP018047.1_3597274_3597487_-	TIGR01764, Probable_excisionase, DNA binding domain, excisionase family	NA|422aa|down_8|NZ_CP018047.1_3598421_3599687_+	pfam12307, DUF3631, Protein of unknown function (DUF3631)	NA|246aa|down_9|NZ_CP018047.1_3600001_3600739_+	pfam10935, DUF2637, Protein of unknown function (DUF2637)
GCF_002009175.1_ASM200917v1	NZ_CP018047	Streptomyces niveus strain SCSIO 3406 chromosome, complete genome	13	3590767-3593463	11,5,5,6	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	DEDDh,cas3,cas5,cas7,cas6	c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	Unclear	GTCGTCATCAGCCCTGGAGGGCTTGCAAC,GTCGTCATCAGCCCTGGAGGGCTN,AGTTGCAAGCCCTTCAGGGCTGATGACGAC,GTTGCAAGCCCTCCAGGGCTGATGACGAC	29,24,30,29	0	0	NA	NA	NA:NA:NA:NA	41,41,32,32	41	Unclear	c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	NA|92aa|up_9|NZ_CP018047.1_3577778_3578054_-,NA|432aa|up_8|NZ_CP018047.1_3578253_3579549_+,NA|463aa|up_1|NZ_CP018047.1_3588190_3589579_-,NA|125aa|down_0|NZ_CP018047.1_3595227_3595602_+,NA|140aa|down_7|NZ_CP018047.1_3603381_3603801_+,NA|99aa|down_9|NZ_CP018047.1_3604866_3605163_-	NA|92aa|up_9|NZ_CP018047.1_3577778_3578054_-	NA	NA|432aa|up_8|NZ_CP018047.1_3578253_3579549_+	NA	NA|200aa|up_7|NZ_CP018047.1_3579545_3580145_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|185aa|up_6|NZ_CP018047.1_3580494_3581049_+	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|193aa|up_5|NZ_CP018047.1_3581225_3581804_+	pfam13023, HD_3, HD domain	cas3|799aa|up_4|NZ_CP018047.1_3583965_3586362_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|224aa|up_3|NZ_CP018047.1_3586358_3587030_-	cd09693, Cas5_I, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|343aa|up_2|NZ_CP018047.1_3587159_3588188_-	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	NA|463aa|up_1|NZ_CP018047.1_3588190_3589579_-	NA	cas6|253aa|up_0|NZ_CP018047.1_3589575_3590334_-	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6	NA|125aa|down_0|NZ_CP018047.1_3595227_3595602_+	NA	NA|389aa|down_1|NZ_CP018047.1_3596111_3597278_-	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|71aa|down_2|NZ_CP018047.1_3597274_3597487_-	TIGR01764, Probable_excisionase, DNA binding domain, excisionase family	NA|422aa|down_3|NZ_CP018047.1_3598421_3599687_+	pfam12307, DUF3631, Protein of unknown function (DUF3631)	NA|246aa|down_4|NZ_CP018047.1_3600001_3600739_+	pfam10935, DUF2637, Protein of unknown function (DUF2637)	NA|204aa|down_5|NZ_CP018047.1_3600997_3601609_+	pfam05713, MobC, Bacterial mobilisation protein (MobC)	NA|548aa|down_6|NZ_CP018047.1_3601605_3603249_+	pfam03432, Relaxase, Relaxase/Mobilisation nuclease domain	NA|140aa|down_7|NZ_CP018047.1_3603381_3603801_+	NA	NA|273aa|down_8|NZ_CP018047.1_3604033_3604852_-	pfam03771, SPDY, Domain of unknown function (DUF317)	NA|99aa|down_9|NZ_CP018047.1_3604866_3605163_-	NA
GCF_002009175.1_ASM200917v1	NZ_CP018047	Streptomyces niveus strain SCSIO 3406 chromosome, complete genome	14	4410067-4410203	12	CRISPRCasFinder	no		c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	Orphan	CTCAATCGCCGGGCGGGCTGGTGAGGTGCCCTCAATCGCCGGGCGGGCTGA	51	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	NA|248aa|up_9|NZ_CP018047.1_4402238_4402982_-,NA|189aa|up_6|NZ_CP018047.1_4405550_4406117_-,NA|201aa|up_5|NZ_CP018047.1_4406174_4406777_-,NA|133aa|up_1|NZ_CP018047.1_4409368_4409767_+,NA|62aa|down_4|NZ_CP018047.1_4415125_4415311_-,NA|112aa|down_7|NZ_CP018047.1_4417382_4417718_+	NA|248aa|up_9|NZ_CP018047.1_4402238_4402982_-	NA	NA|436aa|up_8|NZ_CP018047.1_4403055_4404363_-	cd14728, Ere-like, Erythromycin esterase and succinoglycan biosynthesis related proteins	NA|332aa|up_7|NZ_CP018047.1_4404499_4405495_+	sd00039, 7WD40, WD40 repeats in seven bladed beta propellers	NA|189aa|up_6|NZ_CP018047.1_4405550_4406117_-	NA	NA|201aa|up_5|NZ_CP018047.1_4406174_4406777_-	NA	NA|319aa|up_4|NZ_CP018047.1_4406773_4407730_-	PRK05441, murQ, N-acetylmuramic acid-6-phosphate etherase; Reviewed	NA|306aa|up_3|NZ_CP018047.1_4407929_4408847_-	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|131aa|up_2|NZ_CP018047.1_4408913_4409306_-	cd01282, HTH_MerR-like_sg3, Helix-Turn-Helix DNA binding domain of putative transcription regulators from the MerR superfamily	NA|133aa|up_1|NZ_CP018047.1_4409368_4409767_+	NA	NA|89aa|up_0|NZ_CP018047.1_4409768_4410035_+	pfam13223, DUF4031, Protein of unknown function (DUF4031)	NA|409aa|down_0|NZ_CP018047.1_4410277_4411504_-	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|523aa|down_1|NZ_CP018047.1_4411591_4413160_-	pfam03631, Virul_fac_BrkB, Virulence factor BrkB	NA|222aa|down_2|NZ_CP018047.1_4413406_4414072_-	NF033218, anchor_AmaP, alkaline shock response membrane anchor protein AmaP	NA|364aa|down_3|NZ_CP018047.1_4414037_4415129_-	NF033218, anchor_AmaP, alkaline shock response membrane anchor protein AmaP	NA|62aa|down_4|NZ_CP018047.1_4415125_4415311_-	NA	NA|172aa|down_5|NZ_CP018047.1_4415319_4415835_-	pfam03780, Asp23, Asp23 family, cell envelope-related function	NA|180aa|down_6|NZ_CP018047.1_4416076_4416616_+	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription]	NA|112aa|down_7|NZ_CP018047.1_4417382_4417718_+	NA	NA|285aa|down_8|NZ_CP018047.1_4417789_4418644_-	pfam06283, ThuA, Trehalose utilisation	NA|786aa|down_9|NZ_CP018047.1_4418810_4421168_-	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B
GCF_002009175.1_ASM200917v1	NZ_CP018047	Streptomyces niveus strain SCSIO 3406 chromosome, complete genome	15	4413186-4413262	13	CRISPRCasFinder	no		c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	Orphan	GTCGATCGGTCGTATCGGGCGGTCG	25	1	1	4413211-4413237	NZ_CP018047.1_4413250-4413276	NA	1	1	Orphan	c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	NA|189aa|up_8|NZ_CP018047.1_4405550_4406117_-,NA|201aa|up_7|NZ_CP018047.1_4406174_4406777_-,NA|133aa|up_3|NZ_CP018047.1_4409368_4409767_+,NA|62aa|down_2|NZ_CP018047.1_4415125_4415311_-,NA|112aa|down_5|NZ_CP018047.1_4417382_4417718_+	NA|332aa|up_9|NZ_CP018047.1_4404499_4405495_+	sd00039, 7WD40, WD40 repeats in seven bladed beta propellers	NA|189aa|up_8|NZ_CP018047.1_4405550_4406117_-	NA	NA|201aa|up_7|NZ_CP018047.1_4406174_4406777_-	NA	NA|319aa|up_6|NZ_CP018047.1_4406773_4407730_-	PRK05441, murQ, N-acetylmuramic acid-6-phosphate etherase; Reviewed	NA|306aa|up_5|NZ_CP018047.1_4407929_4408847_-	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|131aa|up_4|NZ_CP018047.1_4408913_4409306_-	cd01282, HTH_MerR-like_sg3, Helix-Turn-Helix DNA binding domain of putative transcription regulators from the MerR superfamily	NA|133aa|up_3|NZ_CP018047.1_4409368_4409767_+	NA	NA|89aa|up_2|NZ_CP018047.1_4409768_4410035_+	pfam13223, DUF4031, Protein of unknown function (DUF4031)	NA|409aa|up_1|NZ_CP018047.1_4410277_4411504_-	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|523aa|up_0|NZ_CP018047.1_4411591_4413160_-	pfam03631, Virul_fac_BrkB, Virulence factor BrkB	NA|222aa|down_0|NZ_CP018047.1_4413406_4414072_-	NF033218, anchor_AmaP, alkaline shock response membrane anchor protein AmaP	NA|364aa|down_1|NZ_CP018047.1_4414037_4415129_-	NF033218, anchor_AmaP, alkaline shock response membrane anchor protein AmaP	NA|62aa|down_2|NZ_CP018047.1_4415125_4415311_-	NA	NA|172aa|down_3|NZ_CP018047.1_4415319_4415835_-	pfam03780, Asp23, Asp23 family, cell envelope-related function	NA|180aa|down_4|NZ_CP018047.1_4416076_4416616_+	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription]	NA|112aa|down_5|NZ_CP018047.1_4417382_4417718_+	NA	NA|285aa|down_6|NZ_CP018047.1_4417789_4418644_-	pfam06283, ThuA, Trehalose utilisation	NA|786aa|down_7|NZ_CP018047.1_4418810_4421168_-	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B	NA|235aa|down_8|NZ_CP018047.1_4421469_4422174_+	pfam03932, CutC, CutC family	NA|163aa|down_9|NZ_CP018047.1_4422225_4422714_-	PRK14764, PRK14764, lipoprotein signal peptidase; Provisional
GCF_002009175.1_ASM200917v1	NZ_CP018047	Streptomyces niveus strain SCSIO 3406 chromosome, complete genome	16	4483381-4483563	14	CRISPRCasFinder	no		c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	Orphan	GGGCGGTCGATCCGGGTCGGATCGGCG	27	0	0	NA	NA	NA	2	2	Orphan	c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	NA,NA|325aa|down_1|NZ_CP018047.1_4486000_4486975_+,NA|370aa|down_5|NZ_CP018047.1_4490640_4491750_+,NA|103aa|down_8|NZ_CP018047.1_4493343_4493652_+	NA|345aa|up_9|NZ_CP018047.1_4468349_4469384_+	TIGR01188, drrA, daunorubicin resistance ABC transporter ATP-binding subunit	NA|291aa|up_8|NZ_CP018047.1_4469380_4470253_+	pfam01061, ABC2_membrane, ABC-2 type transporter	NA|206aa|up_7|NZ_CP018047.1_4470256_4470874_-	pfam05685, Uma2, Putative restriction endonuclease	NA|373aa|up_6|NZ_CP018047.1_4471017_4472136_-	TIGR01366, Putative_phosphoserine_aminotransferase_PSAT	NA|977aa|up_5|NZ_CP018047.1_4472251_4475182_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|366aa|up_4|NZ_CP018047.1_4475476_4476574_+	TIGR04188, conserved_hypothetical_protein, methyltransferase, ATP-grasp peptide maturase system	NA|341aa|up_3|NZ_CP018047.1_4477026_4478049_+	COG5006, rhtA, Threonine/homoserine efflux transporter [Amino acid transport and metabolism]	NA|264aa|up_2|NZ_CP018047.1_4478138_4478930_+	TIGR03084, conserved_hypothetical_protein, TIGR03084 family protein	NA|597aa|up_1|NZ_CP018047.1_4478863_4480654_+	pfam07287, AtuA, Acyclic terpene utilisation family protein AtuA	NA|535aa|up_0|NZ_CP018047.1_4480650_4482255_+	PLN02820, PLN02820, 3-methylcrotonyl-CoA carboxylase, beta chain	NA|381aa|down_0|NZ_CP018047.1_4484527_4485670_+	cd00567, ACAD, Acyl-CoA dehydrogenase	NA|325aa|down_1|NZ_CP018047.1_4486000_4486975_+	NA	NA|453aa|down_2|NZ_CP018047.1_4487045_4488404_+	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|236aa|down_3|NZ_CP018047.1_4488400_4489108_+	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|421aa|down_4|NZ_CP018047.1_4489104_4490367_+	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms]	NA|370aa|down_5|NZ_CP018047.1_4490640_4491750_+	NA	NA|245aa|down_6|NZ_CP018047.1_4491935_4492670_+	PRK07827, PRK07827, enoyl-CoA hydratase family protein	NA|199aa|down_7|NZ_CP018047.1_4492657_4493254_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|103aa|down_8|NZ_CP018047.1_4493343_4493652_+	NA	NA|367aa|down_9|NZ_CP018047.1_4493788_4494889_-	PRK12350, PRK12350, citrate synthase 2; Provisional
GCF_002009175.1_ASM200917v1	NZ_CP018047	Streptomyces niveus strain SCSIO 3406 chromosome, complete genome	17	4768854-4769081	7	PILER-CR	no		c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	Orphan	AGTGCTGGCGGAACGTTGGTCGGAGGATCCGGTGACGCGTGCGTTGATT	49	2	2	4768903-4768955|4769005-4769057	NZ_CP018047.1_4768776-4768828|NZ_CP018047.1_4768776-4768828	NA	2	2	Orphan	c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	NA|120aa|up_0|NZ_CP018047.1_4766006_4766366_+,NA|232aa|down_5|NZ_CP018047.1_4777322_4778018_+	NA|254aa|up_9|NZ_CP018047.1_4759080_4759842_+	TIGR02454, Uncharacterized_protein_MJ1089, cobalt ECF transporter T component CbiQ	NA|262aa|up_8|NZ_CP018047.1_4759838_4760624_+	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system	NA|401aa|up_7|NZ_CP018047.1_4760677_4761880_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|256aa|up_6|NZ_CP018047.1_4761915_4762683_+	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG	NA|272aa|up_5|NZ_CP018047.1_4762927_4763743_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|74aa|up_4|NZ_CP018047.1_4763757_4763979_-	pfam04149, DUF397, Domain of unknown function (DUF397)	NA|287aa|up_3|NZ_CP018047.1_4763982_4764843_-	pfam13560, HTH_31, Helix-turn-helix domain	NA|125aa|up_2|NZ_CP018047.1_4765103_4765478_+	smart00857, Resolvase, Resolvase, N terminal domain	NA|159aa|up_1|NZ_CP018047.1_4765482_4765959_+	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains	NA|120aa|up_0|NZ_CP018047.1_4766006_4766366_+	NA	NA|323aa|down_0|NZ_CP018047.1_4769812_4770781_+	pfam01636, APH, Phosphotransferase enzyme family	NA|519aa|down_1|NZ_CP018047.1_4770785_4772342_-	cd17321, MFS_MMR_MDR_like, Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|561aa|down_2|NZ_CP018047.1_4772498_4774181_-	cd01597, pCLME, prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like	NA|420aa|down_3|NZ_CP018047.1_4774654_4775914_+	COG0446, HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only]	NA|350aa|down_4|NZ_CP018047.1_4775990_4777040_-	cd19087, AKR_AKR12A1_B1_C1, AKR12A, AKR12B,  AKR12C families of aldo-keto reductase (AKR)	NA|232aa|down_5|NZ_CP018047.1_4777322_4778018_+	NA	NA|317aa|down_6|NZ_CP018047.1_4778122_4779073_+	PRK06196, PRK06196, oxidoreductase; Provisional	NA|137aa|down_7|NZ_CP018047.1_4779078_4779489_-	sd00045, ANK, ankyrin repeats	NA|97aa|down_8|NZ_CP018047.1_4779818_4780109_+	pfam09683, Lactococcin_972, Bacteriocin (Lactococcin_972)	NA|699aa|down_9|NZ_CP018047.1_4780229_4782326_+	COG4652, COG4652, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_002009175.1_ASM200917v1	NZ_CP018047	Streptomyces niveus strain SCSIO 3406 chromosome, complete genome	18	5057288-5057501	15	CRISPRCasFinder	no		c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	Orphan	TGTCCTCAATCGCCGGACGGGCT	23	0	0	NA	NA	NA	3	3	Orphan	c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	NA,NA|169aa|down_0|NZ_CP018047.1_5058264_5058771_+	NA|383aa|up_9|NZ_CP018047.1_5043459_5044608_+	TIGR00512, methylthioribose-1-phosphate_isomerase_predicted, S-methyl-5-thioribose-1-phosphate isomerase	NA|226aa|up_8|NZ_CP018047.1_5044842_5045520_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|696aa|up_7|NZ_CP018047.1_5045521_5047609_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|617aa|up_6|NZ_CP018047.1_5047598_5049449_+	PRK13613, PRK13613, lipoprotein LpqB; Provisional	NA|241aa|up_5|NZ_CP018047.1_5049556_5050279_+	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only]	NA|249aa|up_4|NZ_CP018047.1_5050536_5051283_+	cd00552, RaiA, RaiA ("ribosome-associated inhibitor A", also known as Protein Y (PY), YfiA, and SpotY,  is a stress-response protein that binds the ribosomal subunit interface and arrests translation by interfering with aminoacyl-tRNA binding to the ribosomal A site	NA|266aa|up_3|NZ_CP018047.1_5051438_5052236_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|397aa|up_2|NZ_CP018047.1_5052245_5053436_-	COG3214, COG3214, Uncharacterized protein conserved in bacteria [Function unknown]	NA|202aa|up_1|NZ_CP018047.1_5053493_5054099_-	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|942aa|up_0|NZ_CP018047.1_5054339_5057165_+	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed	NA|169aa|down_0|NZ_CP018047.1_5058264_5058771_+	NA	NA|224aa|down_1|NZ_CP018047.1_5058815_5059487_+	COG0546, Gph, Predicted phosphatases [General function prediction only]	NA|1680aa|down_2|NZ_CP018047.1_5059845_5064885_+	pfam05088, Bac_GDH, Bacterial NAD-glutamate dehydrogenase	NA|265aa|down_3|NZ_CP018047.1_5064986_5065781_-	cd03220, ABC_KpsT_Wzt, ATP-binding cassette component of polysaccharide transport system	NA|375aa|down_4|NZ_CP018047.1_5065773_5066898_-	COG1682, TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|210aa|down_5|NZ_CP018047.1_5066884_5067514_+	pfam16859, TetR_C_11, Bacterial transcriptional repressor C-terminal	NA|517aa|down_6|NZ_CP018047.1_5067980_5069531_+	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|256aa|down_7|NZ_CP018047.1_5069655_5070423_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|283aa|down_8|NZ_CP018047.1_5070482_5071331_+	pfam05711, TylF, Macrocin-O-methyltransferase (TylF)	NA|1173aa|down_9|NZ_CP018047.1_5071406_5074925_+	pfam04464, Glyphos_transf, CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
GCF_002009175.1_ASM200917v1	NZ_CP018047	Streptomyces niveus strain SCSIO 3406 chromosome, complete genome	19	5102833-5103342	6	CRT	no		c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	Orphan	NGNNGGCGGTGCCGANGG	18	2	5	5103139-5103156|5103139-5103156|5103139-5103156|5103235-5103252|5103235-5103252	NZ_CP018047.1_243191-243208|NZ_CP018047.1_2936408-2936391|NZ_CP018047.1_5143693-5143676|NZ_CP018047.1_6330693-6330676|NZ_CP018047.1_7016014-7015997	NA	8	8	Orphan	c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	NA,NA|66aa|down_0|NZ_CP018047.1_5103634_5103832_-	NA|548aa|up_9|NZ_CP018047.1_5085015_5086659_+	PRK06184, PRK06184, hypothetical protein; Provisional	NA|336aa|up_8|NZ_CP018047.1_5086772_5087780_+	pfam03756, AfsA, A-factor biosynthesis hotdog domain	NA|748aa|up_7|NZ_CP018047.1_5087856_5090100_-	pfam04464, Glyphos_transf, CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase	NA|306aa|up_6|NZ_CP018047.1_5090238_5091156_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|455aa|up_5|NZ_CP018047.1_5091152_5092517_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|465aa|up_4|NZ_CP018047.1_5092521_5093916_-	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism]	NA|1121aa|up_3|NZ_CP018047.1_5094262_5097625_-	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|559aa|up_2|NZ_CP018047.1_5098040_5099717_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|417aa|up_1|NZ_CP018047.1_5099941_5101192_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|369aa|up_0|NZ_CP018047.1_5101306_5102413_+	PRK00578, prfB, peptide chain release factor 2; Validated	NA|66aa|down_0|NZ_CP018047.1_5103634_5103832_-	NA	NA|230aa|down_1|NZ_CP018047.1_5104098_5104788_+	COG2884, FtsE, Predicted ATPase involved in cell division [Cell division and chromosome partitioning]	NA|306aa|down_2|NZ_CP018047.1_5104823_5105741_+	COG2177, FtsX, Cell division protein [Cell division and chromosome partitioning]	NA|398aa|down_3|NZ_CP018047.1_5105808_5107002_+	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane]	NA|162aa|down_4|NZ_CP018047.1_5107020_5107506_+	pfam01668, SmpB, SmpB protein	NA|246aa|down_5|NZ_CP018047.1_5108421_5109159_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|707aa|down_6|NZ_CP018047.1_5109249_5111370_+	cd10962, CE4_GT2-like, Catalytic NodB homology domain of uncharacterized bacterial glycosyl transferase, group 2-like family proteins	NA|440aa|down_7|NZ_CP018047.1_5111366_5112686_+	pfam01757, Acyl_transf_3, Acyltransferase family	NA|139aa|down_8|NZ_CP018047.1_5113165_5113582_-	cd18755, PIN_MtVapC3_VapC21-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC3, VapC21 and related proteins	NA|74aa|down_9|NZ_CP018047.1_5113578_5113800_-	pfam09957, VapB_antitoxin, Bacterial antitoxin of type II TA system, VapB
GCF_002009175.1_ASM200917v1	NZ_CP018047	Streptomyces niveus strain SCSIO 3406 chromosome, complete genome	20	5491106-5491191	16	CRISPRCasFinder	no		c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	Orphan	CACGGGGCAGGCGCCCGGCACCGGCCAGG	29	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	NA,NA|100aa|down_3|NZ_CP018047.1_5496818_5497118_-,NA|164aa|down_5|NZ_CP018047.1_5499277_5499769_-,NA|403aa|down_6|NZ_CP018047.1_5499765_5500974_-	NA|228aa|up_9|NZ_CP018047.1_5477354_5478038_+	PRK12553, PRK12553, ATP-dependent Clp protease proteolytic subunit; Reviewed	NA|431aa|up_8|NZ_CP018047.1_5478191_5479484_+	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX	NA|320aa|up_7|NZ_CP018047.1_5479560_5480520_-	pfam09770, PAT1, Topoisomerase II-associated protein PAT1	NA|874aa|up_6|NZ_CP018047.1_5480657_5483279_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|508aa|up_5|NZ_CP018047.1_5483348_5484872_+	COG0285, FolC, Folylpolyglutamate synthase [Coenzyme metabolism]	NA|117aa|up_4|NZ_CP018047.1_5484878_5485229_+	pfam14017, DUF4233, Protein of unknown function (DUF4233)	NA|137aa|up_3|NZ_CP018047.1_5485335_5485746_+	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|340aa|up_2|NZ_CP018047.1_5486031_5487051_+	PRK13927, PRK13927, rod shape-determining protein MreB; Provisional	NA|320aa|up_1|NZ_CP018047.1_5487310_5488270_+	PRK13922, PRK13922, rod shape-determining protein MreC; Provisional	NA|222aa|up_0|NZ_CP018047.1_5488281_5488947_+	TIGR03426, shape_MreD, rod shape-determining protein MreD	NA|400aa|down_0|NZ_CP018047.1_5491301_5492501_+	TIGR02210, Rod_shape-determining_protein_RodA, rod shape-determining protein RodA	NA|531aa|down_1|NZ_CP018047.1_5492562_5494155_+	smart00880, CHAD, The CHAD domain is an alpha-helical domain functionally associated with some members of the adenylate cyclase family	NA|645aa|down_2|NZ_CP018047.1_5494259_5496194_+	TIGR03960, radical_SAM_domain_protein, radical SAM family uncharacterized protein	NA|100aa|down_3|NZ_CP018047.1_5496818_5497118_-	NA	NA|650aa|down_4|NZ_CP018047.1_5497331_5499281_-	pfam12532, DUF3732, Protein of unknown function (DUF3732)	NA|164aa|down_5|NZ_CP018047.1_5499277_5499769_-	NA	NA|403aa|down_6|NZ_CP018047.1_5499765_5500974_-	NA	NA|361aa|down_7|NZ_CP018047.1_5501544_5502627_-	COG5659, COG5659, FOG: Transposase [DNA replication, recombination, and repair]	NA|258aa|down_8|NZ_CP018047.1_5502707_5503481_-	cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs	NA|209aa|down_9|NZ_CP018047.1_5503560_5504187_+	COG1309, AcrR, Transcriptional regulator [Transcription]
GCF_002009175.1_ASM200917v1	NZ_CP018047	Streptomyces niveus strain SCSIO 3406 chromosome, complete genome	21	5661384-5661484	17	CRISPRCasFinder	no		c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	Orphan	CCTGTAGCTCAATTGGCAGAGCA	23	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	NA|98aa|up_0|NZ_CP018047.1_5660884_5661178_-,NA	NA|697aa|up_9|NZ_CP018047.1_5645126_5647217_-	cd02754, MopB_Nitrate-R-NapA-like, Nitrate reductases, NapA (Nitrate-R-NapA), NasA, and NarB catalyze the reduction of nitrate to nitrite	NA|256aa|up_8|NZ_CP018047.1_5647350_5648118_-	COG2949, SanA, Uncharacterized membrane protein [Function unknown]	NA|456aa|up_7|NZ_CP018047.1_5649047_5650415_+	PRK03007, PRK03007, deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional	NA|426aa|up_6|NZ_CP018047.1_5650636_5651914_+	PRK09754, PRK09754, phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional	NA|641aa|up_5|NZ_CP018047.1_5652018_5653941_+	PRK05667, dnaG, DNA primase; Validated	NA|419aa|up_4|NZ_CP018047.1_5654152_5655409_+	PRK05901, PRK05901, RNA polymerase sigma factor; Provisional	NA|645aa|up_3|NZ_CP018047.1_5655492_5657427_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|578aa|up_2|NZ_CP018047.1_5657426_5659160_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|484aa|up_1|NZ_CP018047.1_5659353_5660805_-	cd07809, FGGY_D-XK_1, D-xylulose kinases, subgroup 1; members of the FGGY family of carbohydrate kinases	NA|98aa|up_0|NZ_CP018047.1_5660884_5661178_-	NA	NA|73aa|down_0|NZ_CP018047.1_5662115_5662334_-	PRK10153, PRK10153, DNA-binding transcriptional activator CadC; Provisional	NA|262aa|down_1|NZ_CP018047.1_5662474_5663260_+	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold	NA|166aa|down_2|NZ_CP018047.1_5663270_5663768_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|168aa|down_3|NZ_CP018047.1_5663962_5664466_+	pfam00174, Oxidored_molyb, Oxidoreductase molybdopterin binding domain	NA|132aa|down_4|NZ_CP018047.1_5664582_5664978_+	cd04762, HTH_MerR-trunc, Helix-Turn-Helix DNA binding domain of truncated MerR-like proteins	NA|272aa|down_5|NZ_CP018047.1_5665030_5665846_+	cd13538, PBP2_ModA_like_1, Substrate binding domain of putative molybdate-binding protein;the type 2 periplasmic binding protein fold	NA|664aa|down_6|NZ_CP018047.1_5665995_5667987_+	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|278aa|down_7|NZ_CP018047.1_5668072_5668906_+	pfam02655, ATP-grasp_3, ATP-grasp domain	NA|830aa|down_8|NZ_CP018047.1_5669564_5672054_+	cd04084, CBM6_xylanase-like, Carbohydrate Binding Module 6 (CBM6); many are appended to glycoside hydrolase (GH) family 11 and GH43 xylanase domains	NA|730aa|down_9|NZ_CP018047.1_5672050_5674240_+	cd11574, GH99, Glycoside hydrolase family 99, an endo-alpha-1,2-mannosidase
GCF_002009175.1_ASM200917v1	NZ_CP018047	Streptomyces niveus strain SCSIO 3406 chromosome, complete genome	22	6043982-6044078	18	CRISPRCasFinder	no		c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	Orphan	AGCCCGTCCGGCGTTTGAGGACAAA	25	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	NA|81aa|up_6|NZ_CP018047.1_6035110_6035353_+,NA|401aa|up_2|NZ_CP018047.1_6040055_6041258_+,NA|231aa|down_7|NZ_CP018047.1_6051450_6052143_-	NA|456aa|up_9|NZ_CP018047.1_6032542_6033910_+	cd06453, SufS_like, Cysteine desulfurase (SufS)-like	NA|94aa|up_8|NZ_CP018047.1_6033949_6034231_-	pfam01037, AsnC_trans_reg, Lrp/AsnC ligand binding domain	NA|237aa|up_7|NZ_CP018047.1_6034227_6034938_-	COG0705, COG0705, Membrane associated serine protease [Amino acid transport and metabolism]	NA|81aa|up_6|NZ_CP018047.1_6035110_6035353_+	NA	NA|454aa|up_5|NZ_CP018047.1_6035388_6036750_+	pfam05991, NYN_YacP, YacP-like NYN domain	NA|342aa|up_4|NZ_CP018047.1_6037086_6038112_+	pfam00877, NLPC_P60, NlpC/P60 family	NA|343aa|up_3|NZ_CP018047.1_6038389_6039418_+	pfam00877, NLPC_P60, NlpC/P60 family	NA|401aa|up_2|NZ_CP018047.1_6040055_6041258_+	NA	NA|447aa|up_1|NZ_CP018047.1_6041344_6042685_-	pfam09594, GT87, Glycosyltransferase family 87	NA|385aa|up_0|NZ_CP018047.1_6042794_6043949_+	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|599aa|down_0|NZ_CP018047.1_6044116_6045913_-	cd05907, VL_LC_FACS_like, Long-chain fatty acid CoA synthetases and Bubblegum-like very long-chain fatty acid CoA synthetases	NA|285aa|down_1|NZ_CP018047.1_6046192_6047047_+	cd07392, MPP_PAE1087, Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain	NA|163aa|down_2|NZ_CP018047.1_6047147_6047636_+	cd07819, SRPBCC_2, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins	NA|420aa|down_3|NZ_CP018047.1_6047677_6048937_+	COG0003, ArsA, Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|159aa|down_4|NZ_CP018047.1_6049025_6049502_+	pfam17230, DUF5304, Family of unknown function (DUF5304)	NA|314aa|down_5|NZ_CP018047.1_6049568_6050510_+	TIGR00744, Glucokinase_Glucose_kinase	NA|249aa|down_6|NZ_CP018047.1_6050653_6051400_+	COG3568, ElsH, Metal-dependent hydrolase [General function prediction only]	NA|231aa|down_7|NZ_CP018047.1_6051450_6052143_-	NA	NA|260aa|down_8|NZ_CP018047.1_6052135_6052915_-	COG1647, COG1647, Esterase/lipase [General function prediction only]	NA|235aa|down_9|NZ_CP018047.1_6053060_6053765_+	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like
GCF_002009175.1_ASM200917v1	NZ_CP018047	Streptomyces niveus strain SCSIO 3406 chromosome, complete genome	23	6754875-6754947	19	CRISPRCasFinder	no	DEDDh	c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	Unclear	CCCAGCCCGCCCGGCGCTTGAGG	23	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	NA|154aa|up_8|NZ_CP018047.1_6744511_6744973_-,NA|120aa|up_7|NZ_CP018047.1_6744969_6745329_-,NA|98aa|up_6|NZ_CP018047.1_6745453_6745747_+,NA|86aa|down_3|NZ_CP018047.1_6758701_6758959_+,NA|69aa|down_4|NZ_CP018047.1_6759147_6759354_+	NA|168aa|up_9|NZ_CP018047.1_6743969_6744473_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|154aa|up_8|NZ_CP018047.1_6744511_6744973_-	NA	NA|120aa|up_7|NZ_CP018047.1_6744969_6745329_-	NA	NA|98aa|up_6|NZ_CP018047.1_6745453_6745747_+	NA	NA|373aa|up_5|NZ_CP018047.1_6746027_6747146_+	PRK11153, metN, DL-methionine transporter ATP-binding subunit; Provisional	NA|223aa|up_4|NZ_CP018047.1_6747142_6747811_+	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|287aa|up_3|NZ_CP018047.1_6747891_6748752_+	cd13597, PBP2_lipoprotein_Tp32, The substrate-binding domain of the 32-kilodalton lipoprotein (Tp32) from Treponema pallidum binds L-methionine; the type 2 periplasmic-binding protein fold	NA|213aa|up_2|NZ_CP018047.1_6748870_6749509_+	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|407aa|up_1|NZ_CP018047.1_6749690_6750911_+	cd11644, Precorrin-6Y-MT, Precorrin-6Y methyltransferase (also named CbiE)	NA|1191aa|up_0|NZ_CP018047.1_6751247_6754820_+	pfam02277, DBI_PRT, Phosphoribosyltransferase	NA|425aa|down_0|NZ_CP018047.1_6755137_6756412_+	cd11642, SUMT, Uroporphyrin-III C-methyltransferase (also known as S-Adenosyl-L-methionine:uroporphyrinogen III methyltransferase, SUMT)	NA|274aa|down_1|NZ_CP018047.1_6756404_6757226_+	COG0566, SpoU, rRNA methylases [Translation, ribosomal structure and biogenesis]	NA|421aa|down_2|NZ_CP018047.1_6757233_6758496_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|86aa|down_3|NZ_CP018047.1_6758701_6758959_+	NA	NA|69aa|down_4|NZ_CP018047.1_6759147_6759354_+	NA	NA|340aa|down_5|NZ_CP018047.1_6759574_6760594_+	pfam01636, APH, Phosphotransferase enzyme family	NA|98aa|down_6|NZ_CP018047.1_6760662_6760956_+	pfam13453, zf-TFIIB, Transcription factor zinc-finger	NA|352aa|down_7|NZ_CP018047.1_6761631_6762687_+	TIGR01824, Anthranilate_synthase_component_I-like_protein, aminodeoxychorismate synthase, component I, clade 2	NA|274aa|down_8|NZ_CP018047.1_6762687_6763509_+	cd01559, ADCL_like, ADCL_like: 4-Amino-4-deoxychorismate lyase:  is a member of the fold-type IV of PLP dependent enzymes that converts 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate and pyruvate	NA|280aa|down_9|NZ_CP018047.1_6763551_6764391_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family
GCF_002009175.1_ASM200917v1	NZ_CP018047	Streptomyces niveus strain SCSIO 3406 chromosome, complete genome	24	6810634-6810778	20	CRISPRCasFinder	no		c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	Orphan	CAGTACGACGGCGGTGGCTGGGACACCGGACAGCAGCAGTACG	43	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	NA,NA	NA|238aa|up_9|NZ_CP018047.1_6797995_6798709_+	cd06262, metallo-hydrolase-like_MBL-fold, mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain	NA|421aa|up_8|NZ_CP018047.1_6798722_6799985_+	PRK00037, hisS, histidyl-tRNA synthetase; Reviewed	NA|212aa|up_7|NZ_CP018047.1_6800140_6800776_+	cd12922, VKOR_5, Vitamin K epoxide reductase family in bacteria	NA|456aa|up_6|NZ_CP018047.1_6800840_6802208_+	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|226aa|up_5|NZ_CP018047.1_6802242_6802920_-	pfam10615, DUF2470, Protein of unknown function (DUF2470)	NA|205aa|up_4|NZ_CP018047.1_6803100_6803715_+	PRK05327, rpsD, 30S ribosomal protein S4; Validated	NA|748aa|up_3|NZ_CP018047.1_6803763_6806007_-	COG3903, COG3903, Predicted ATPase [General function prediction only]	NA|157aa|up_2|NZ_CP018047.1_6806219_6806690_+	pfam06103, DUF948, Bacterial protein of unknown function (DUF948)	NA|890aa|up_1|NZ_CP018047.1_6807084_6809754_+	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed	NA|155aa|up_0|NZ_CP018047.1_6809794_6810259_+	PRK00109, PRK00109, Holliday junction resolvase RuvX	NA|282aa|down_0|NZ_CP018047.1_6812419_6813265_+	PRK00258, aroE, shikimate 5-dehydrogenase; Reviewed	NA|395aa|down_1|NZ_CP018047.1_6813394_6814579_+	PRK05382, PRK05382, chorismate synthase; Validated	NA|189aa|down_2|NZ_CP018047.1_6814575_6815142_+	PRK00131, aroK, shikimate kinase; Reviewed	NA|368aa|down_3|NZ_CP018047.1_6815138_6816242_+	PRK00002, aroB, 3-dehydroquinate synthase; Reviewed	NA|147aa|down_4|NZ_CP018047.1_6816238_6816679_+	PRK05395, PRK05395, type II 3-dehydroquinate dehydratase	NA|337aa|down_5|NZ_CP018047.1_6816833_6817844_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|371aa|down_6|NZ_CP018047.1_6817950_6819063_+	cd01092, APP-like, Similar to Prolidase and Aminopeptidase P	NA|189aa|down_7|NZ_CP018047.1_6819146_6819713_+	PRK00529, PRK00529, elongation factor P; Validated	NA|146aa|down_8|NZ_CP018047.1_6819715_6820153_+	PRK00202, nusB, transcription antitermination factor NusB	NA|167aa|down_9|NZ_CP018047.1_6820567_6821068_-	cd16837, BldD_C_like, C-terminal domain of BldD and similar transcription factors
GCF_002009175.1_ASM200917v1	NZ_CP018047	Streptomyces niveus strain SCSIO 3406 chromosome, complete genome	25	7394601-7399391	21,7,8	CRISPRCasFinder,CRT,PILER-CR	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	Type I-E	GGGCAACCCCCGCTGGCGCGGGGCCGAC,GGGCAACCCCCGCTGGCGCGGGGCCGAC,GGGCAACCCCCGCTGGCGCGGGGCCGAC	28,28,28	4	4	7398657-7398690|7398780-7398812|7398664-7398697|7398787-7398819	NZ_CP018047.1_4981802-4981769|NZ_CP018047.1_4980432-4980464|NZ_CP018047.1_4981802-4981769|NZ_CP018047.1_4980432-4980464	NA:NA:NA	78,78,77	78	TypeI-E	c2c9_V-U4,csa3,DEDDh,WYL,DinG,cas3,cas5,cas7,cas6,Cas14u_CAS-V,Cas9_archaeal,cas8e,cse2gr11,cas6e,cas1,cas2	NA|257aa|up_2|NZ_CP018047.1_7386046_7386817_-,NA|128aa|down_8|NZ_CP018047.1_7409833_7410217_-,NA|74aa|down_9|NZ_CP018047.1_7410739_7410961_-	NA|494aa|up_9|NZ_CP018047.1_7376739_7378221_-	COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion]	NA|192aa|up_8|NZ_CP018047.1_7378351_7378927_-	pfam10400, Vir_act_alpha_C, Virulence activator alpha C-term	NA|682aa|up_7|NZ_CP018047.1_7378957_7381003_-	cd02930, DCR_FMN, 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain	NA|137aa|up_6|NZ_CP018047.1_7381124_7381535_-	TIGR02364, dha_pts, dihydroxyacetone kinase, phosphotransfer subunit	NA|200aa|up_5|NZ_CP018047.1_7381531_7382131_-	TIGR02365, dha_L_ycgS, dihydroxyacetone kinase, phosphoprotein-dependent, L subunit	NA|331aa|up_4|NZ_CP018047.1_7382227_7383220_-	PRK14481, PRK14481, dihydroxyacetone kinase subunit DhaK; Provisional	NA|409aa|up_3|NZ_CP018047.1_7384395_7385622_-	COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton]	NA|257aa|up_2|NZ_CP018047.1_7386046_7386817_-	NA	NA|120aa|up_1|NZ_CP018047.1_7389050_7389410_-	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation	NA|902aa|up_0|NZ_CP018047.1_7390627_7393333_+	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms]	cas3|995aa|down_0|NZ_CP018047.1_7399572_7402557_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|568aa|down_1|NZ_CP018047.1_7402796_7404500_+	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cse2gr11|167aa|down_2|NZ_CP018047.1_7404691_7405192_+	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas7|384aa|down_3|NZ_CP018047.1_7405320_7406472_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|285aa|down_4|NZ_CP018047.1_7406468_7407323_+	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|272aa|down_5|NZ_CP018047.1_7407328_7408144_+	pfam08798, CRISPR_assoc, CRISPR associated protein	cas1|362aa|down_6|NZ_CP018047.1_7408147_7409233_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|93aa|down_7|NZ_CP018047.1_7409232_7409511_+	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	NA|128aa|down_8|NZ_CP018047.1_7409833_7410217_-	NA	NA|74aa|down_9|NZ_CP018047.1_7410739_7410961_-	NA
