assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002012105.1_ASM201210v1	NZ_CP018995	Escherichia coli strain Ecol_AZ147 chromosome, complete genome	1	444759-446680	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no		cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,cas3,DEDDh,c2c9_V-U4,DinG	Orphan	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	30,31,31	31	Orphan	cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,cas3,DEDDh,c2c9_V-U4,DinG,RT	NA|47aa|up_1|NZ_CP018995.1_443468_443609_-,NA	NA|434aa|up_9|NZ_CP018995.1_434165_435467_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_8|NZ_CP018995.1_435514_437749_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_7|NZ_CP018995.1_437826_438075_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_6|NZ_CP018995.1_438074_438410_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_5|NZ_CP018995.1_438480_439272_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_4|NZ_CP018995.1_439499_441137_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_3|NZ_CP018995.1_441224_442523_+	PRK00077, eno, enolase; Provisional	NA|291aa|up_2|NZ_CP018995.1_442582_443455_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|47aa|up_1|NZ_CP018995.1_443468_443609_-	NA	NA|224aa|up_0|NZ_CP018995.1_443747_444419_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP018995.1_447318_448797_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP018995.1_448823_450101_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|NZ_CP018995.1_450419_451205_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|NZ_CP018995.1_451274_452729_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|470aa|down_4|NZ_CP018995.1_452750_454160_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|NZ_CP018995.1_454137_454917_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_6|NZ_CP018995.1_454913_455774_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_7|NZ_CP018995.1_455921_456497_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|NZ_CP018995.1_456513_456774_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|NZ_CP018995.1_456764_458036_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCF_002012105.1_ASM201210v1	NZ_CP018995	Escherichia coli strain Ecol_AZ147 chromosome, complete genome	2	474936-475452	2,2	CRISPRCasFinder,PILER-CR	no	cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,cas3,DEDDh,c2c9_V-U4,DinG	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTTCCCCGCGTCAGCGGGGATAAACCG	29,27	0	0	NA	NA	I-E:I-E	8,8	8	TypeI-E	cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,cas3,DEDDh,c2c9_V-U4,DinG,RT	NA,NA	NA|457aa|up_9|NZ_CP018995.1_463362_464732_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|100aa|up_8|NZ_CP018995.1_466421_466721_+	pfam01527, HTH_Tnp_1, Transposase	NA|289aa|up_7|NZ_CP018995.1_466717_467584_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas8e|503aa|up_6|NZ_CP018995.1_469260_470769_+	PRK09693, PRK09693, Cascade antiviral complex protein; Validated	cse2gr11|161aa|up_5|NZ_CP018995.1_470761_471244_+	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|364aa|up_4|NZ_CP018995.1_471256_472348_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|225aa|up_3|NZ_CP018995.1_472350_473025_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas6e|200aa|up_2|NZ_CP018995.1_473011_473611_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|306aa|up_1|NZ_CP018995.1_473626_474544_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|95aa|up_0|NZ_CP018995.1_474545_474830_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP018995.1_475533_476571_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP018995.1_476822_477731_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP018995.1_477732_479160_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP018995.1_479159_479765_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP018995.1_479814_480138_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP018995.1_480331_480643_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP018995.1_480661_481372_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP018995.1_481371_481851_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP018995.1_481847_482897_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP018995.1_482877_483639_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_002012105.1_ASM201210v1	NZ_CP018995	Escherichia coli strain Ecol_AZ147 chromosome, complete genome	3	969580-969697	3	CRISPRCasFinder	no		cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,cas3,DEDDh,c2c9_V-U4,DinG	Orphan	CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	31	0	0	NA	NA	NA	1	1	Orphan	cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,cas3,DEDDh,c2c9_V-U4,DinG,RT	NA,NA	NA|268aa|up_9|NZ_CP018995.1_958215_959019_+	PRK10128, PRK10128, 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional	NA|301aa|up_8|NZ_CP018995.1_959059_959962_-	PRK09956, PRK09956, ISNCY family transposase	NA|397aa|up_7|NZ_CP018995.1_960155_961346_-	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit	NA|420aa|up_6|NZ_CP018995.1_961342_962602_-	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|543aa|up_5|NZ_CP018995.1_962591_964220_-	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|453aa|up_4|NZ_CP018995.1_964492_965851_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|359aa|up_3|NZ_CP018995.1_965855_966932_+	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|217aa|up_2|NZ_CP018995.1_967394_968045_+	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|85aa|up_1|NZ_CP018995.1_968098_968353_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|NZ_CP018995.1_968352_969483_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|NZ_CP018995.1_969716_972002_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|1245aa|down_1|NZ_CP018995.1_972697_976432_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|241aa|down_2|NZ_CP018995.1_976559_977282_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|876aa|down_3|NZ_CP018995.1_977428_980056_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|563aa|down_4|NZ_CP018995.1_980204_981893_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|208aa|down_5|NZ_CP018995.1_981889_982513_+	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1465aa|down_6|NZ_CP018995.1_982656_987051_+	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|550aa|down_7|NZ_CP018995.1_987051_988701_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|259aa|down_8|NZ_CP018995.1_988705_989482_+	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]	NA|950aa|down_9|NZ_CP018995.1_989756_992606_+	PRK10841, PRK10841, two-component system sensor histidine kinase RcsC
GCF_002012105.1_ASM201210v1	NZ_CP018995	Escherichia coli strain Ecol_AZ147 chromosome, complete genome	4	1547293-1547416	4	CRISPRCasFinder	no	DEDDh	cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,cas3,DEDDh,c2c9_V-U4,DinG	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,cas3,DEDDh,c2c9_V-U4,DinG,RT	NA,NA|30aa|down_7|NZ_CP018995.1_1556312_1556402_+	NA|471aa|up_9|NZ_CP018995.1_1536747_1538160_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP018995.1_1538716_1538926_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP018995.1_1539380_1540007_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP018995.1_1540027_1542130_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_5|NZ_CP018995.1_1542142_1542781_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP018995.1_1542844_1543513_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP018995.1_1543509_1544295_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP018995.1_1544298_1545111_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP018995.1_1545122_1546727_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP018995.1_1546852_1547158_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP018995.1_1547730_1548987_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP018995.1_1549027_1550401_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP018995.1_1550615_1551257_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP018995.1_1551296_1552445_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP018995.1_1552735_1553947_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP018995.1_1554059_1554992_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP018995.1_1554988_1556014_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP018995.1_1556312_1556402_+	NA	NA|390aa|down_8|NZ_CP018995.1_1556567_1557737_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP018995.1_1557971_1558553_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_002012105.1_ASM201210v1	NZ_CP018995	Escherichia coli strain Ecol_AZ147 chromosome, complete genome	5	2238165-2238256	5	CRISPRCasFinder	no		cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,cas3,DEDDh,c2c9_V-U4,DinG	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,cas3,DEDDh,c2c9_V-U4,DinG,RT	NA|70aa|up_9|NZ_CP018995.1_2227242_2227452_-,NA	NA|70aa|up_9|NZ_CP018995.1_2227242_2227452_-	NA	NA|1321aa|up_8|NZ_CP018995.1_2227506_2231469_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NZ_CP018995.1_2231507_2232146_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NZ_CP018995.1_2232433_2233525_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NZ_CP018995.1_2233524_2234217_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP018995.1_2234228_2234615_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP018995.1_2234622_2235423_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP018995.1_2235432_2236023_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP018995.1_2236033_2236528_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP018995.1_2236548_2237877_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP018995.1_2238679_2239276_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP018995.1_2239296_2239524_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP018995.1_2239561_2240803_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|307aa|down_3|NZ_CP018995.1_2242608_2243529_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_4|NZ_CP018995.1_2243528_2243834_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_5|NZ_CP018995.1_2243985_2244585_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_6|NZ_CP018995.1_2244581_2247128_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_7|NZ_CP018995.1_2247127_2248300_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_8|NZ_CP018995.1_2248429_2249122_+	PRK10766, PRK10766, two-component system response regulator TorR	NA|343aa|down_9|NZ_CP018995.1_2249094_2250123_-	PRK10936, PRK10936, TMAO reductase system periplasmic protein TorT; Provisional
GCF_002012105.1_ASM201210v1	NZ_CP018995	Escherichia coli strain Ecol_AZ147 chromosome, complete genome	6	2380523-2380728	6,2,3	CRISPRCasFinder,CRT,PILER-CR	no		cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,cas3,DEDDh,c2c9_V-U4,DinG	Orphan	TTTCTAAGCTGCCTGTACGGCAGTGAAC,TTTCTAAGCTGCCTGTACGGCAGTGAAC,TTTCTAAGCTGCCTGTACGGCAGTGAACG	28,28,29	0	0	NA	NA	I-F:I-F:I-F	3,3,2	3	Orphan	cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,cas3,DEDDh,c2c9_V-U4,DinG,RT	NA,NA	NA|431aa|up_9|NZ_CP018995.1_2365646_2366939_-	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|448aa|up_8|NZ_CP018995.1_2367029_2368373_-	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|204aa|up_7|NZ_CP018995.1_2368383_2368995_-	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA	NA|1330aa|up_6|NZ_CP018995.1_2369149_2373139_-	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|165aa|up_5|NZ_CP018995.1_2373273_2373768_-	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|322aa|up_4|NZ_CP018995.1_2374312_2375278_+	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|589aa|up_3|NZ_CP018995.1_2375400_2377167_+	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|574aa|up_2|NZ_CP018995.1_2377167_2378889_+	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|235aa|up_1|NZ_CP018995.1_2378930_2379635_+	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|73aa|up_0|NZ_CP018995.1_2379919_2380138_+	PRK00276, infA, translation initiation factor IF-1; Validated	NA|759aa|down_0|NZ_CP018995.1_2380938_2383215_-	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	NA|107aa|down_1|NZ_CP018995.1_2383245_2383566_-	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|75aa|down_2|NZ_CP018995.1_2383888_2384113_+	PRK09937, PRK09937, cold shock-like protein CspD	NA|649aa|down_3|NZ_CP018995.1_2384185_2386132_-	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|372aa|down_4|NZ_CP018995.1_2386128_2387244_-	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|319aa|down_5|NZ_CP018995.1_2387394_2388351_+	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown]	NA|553aa|down_6|NZ_CP018995.1_2388347_2390006_-	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|300aa|down_7|NZ_CP018995.1_2391583_2392483_+	COG2431, COG2431, Predicted membrane protein [Function unknown]	NA|551aa|down_8|NZ_CP018995.1_2392626_2394279_+	PRK05290, PRK05290, hybrid cluster protein; Provisional	NA|323aa|down_9|NZ_CP018995.1_2394290_2395259_+	PRK10684, PRK10684, HCP oxidoreductase, NADH-dependent; Provisional
GCF_002012105.1_ASM201210v1	NZ_CP018995	Escherichia coli strain Ecol_AZ147 chromosome, complete genome	7	2536837-2536981	7	CRISPRCasFinder	no		cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,cas3,DEDDh,c2c9_V-U4,DinG	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	52	0	0	NA	NA	NA	1	1	Orphan	cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,cas3,DEDDh,c2c9_V-U4,DinG,RT	NA,NA	NA|330aa|up_9|NZ_CP018995.1_2524735_2525725_-	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|303aa|up_8|NZ_CP018995.1_2526121_2527030_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|674aa|up_7|NZ_CP018995.1_2527221_2529243_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|226aa|up_6|NZ_CP018995.1_2529821_2530499_-	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD	NA|252aa|up_5|NZ_CP018995.1_2530491_2531247_-	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional	NA|385aa|up_4|NZ_CP018995.1_2531233_2532388_-	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|347aa|up_3|NZ_CP018995.1_2532384_2533425_-	PRK15108, PRK15108, biotin synthase; Provisional	NA|430aa|up_2|NZ_CP018995.1_2533511_2534801_+	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated	NA|159aa|up_1|NZ_CP018995.1_2534859_2535336_+	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional	NA|428aa|up_0|NZ_CP018995.1_2535487_2536771_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|754aa|down_0|NZ_CP018995.1_2537004_2539266_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|478aa|down_1|NZ_CP018995.1_2539448_2540882_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|351aa|down_2|NZ_CP018995.1_2540957_2542010_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|318aa|down_3|NZ_CP018995.1_2542193_2543147_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_4|NZ_CP018995.1_2543187_2544183_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_5|NZ_CP018995.1_2544337_2545156_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_6|NZ_CP018995.1_2545156_2546215_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_7|NZ_CP018995.1_2546217_2546907_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_8|NZ_CP018995.1_2546906_2547680_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|50aa|down_9|NZ_CP018995.1_2547846_2547996_-	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ
GCF_002012105.1_ASM201210v1	NZ_CP018995	Escherichia coli strain Ecol_AZ147 chromosome, complete genome	8	2776030-2776126	8	CRISPRCasFinder	no		cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,cas3,DEDDh,c2c9_V-U4,DinG	Orphan	TTGTAGGCCTGATAAGATGCGTCAAGC	27	0	0	NA	NA	NA	1	1	Orphan	cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,cas3,DEDDh,c2c9_V-U4,DinG,RT	NA,NA	NA|231aa|up_9|NZ_CP018995.1_2767825_2768518_-	PRK15195, PRK15195, molecular chaperone FimC	NA|181aa|up_8|NZ_CP018995.1_2768737_2769280_-	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA	NA|289aa|up_7|NZ_CP018995.1_2769750_2770617_+	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|71aa|up_6|NZ_CP018995.1_2770618_2770831_+	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|174aa|up_5|NZ_CP018995.1_2770938_2771460_+	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|462aa|up_4|NZ_CP018995.1_2771495_2772881_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|165aa|up_3|NZ_CP018995.1_2773054_2773549_+	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|241aa|up_2|NZ_CP018995.1_2773551_2774274_+	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|170aa|up_1|NZ_CP018995.1_2774391_2774901_+	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|356aa|up_0|NZ_CP018995.1_2774897_2775965_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|298aa|down_0|NZ_CP018995.1_2776169_2777063_-	PRK09411, PRK09411, carbamate kinase; Reviewed	NA|272aa|down_1|NZ_CP018995.1_2777059_2777875_-	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|420aa|down_2|NZ_CP018995.1_2777885_2779145_-	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|556aa|down_3|NZ_CP018995.1_2779154_2780822_-	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|350aa|down_4|NZ_CP018995.1_2781138_2782188_+	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional	NA|412aa|down_5|NZ_CP018995.1_2782209_2783445_+	TIGR03176, AllC, allantoate amidohydrolase	NA|262aa|down_6|NZ_CP018995.1_2783455_2784241_+	TIGR03214, ura-cupin, putative allantoin catabolism protein	NA|382aa|down_7|NZ_CP018995.1_2784468_2785614_-	PRK09932, PRK09932, glycerate 3-kinase	NA|434aa|down_8|NZ_CP018995.1_2785635_2786937_-	PRK11412, PRK11412, uracil/xanthine transporter	NA|454aa|down_9|NZ_CP018995.1_2786993_2788355_-	PRK08044, PRK08044, allantoinase AllB
GCF_002012105.1_ASM201210v1	NZ_CP018995	Escherichia coli strain Ecol_AZ147 chromosome, complete genome	9	2909692-2909836	9	CRISPRCasFinder	no		cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,cas3,DEDDh,c2c9_V-U4,DinG	Orphan	TTTTGTAGGCCTGATAAGACGCGACAAGCGTCGCATCAGGCAT	43	0	0	NA	NA	NA	1	1	Orphan	cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,cas3,DEDDh,c2c9_V-U4,DinG,RT	NA,NA|28aa|down_2|NZ_CP018995.1_2911881_2911965_-	NA|357aa|up_9|NZ_CP018995.1_2894833_2895904_-	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional	NA|194aa|up_8|NZ_CP018995.1_2895996_2896578_+	PRK10045, PRK10045, ACP phosphodiesterase	NA|606aa|up_7|NZ_CP018995.1_2896582_2898400_-	PRK10785, PRK10785, maltodextrin glucosidase; Provisional	NA|458aa|up_6|NZ_CP018995.1_2898555_2899929_-	PRK10580, proY, putative proline-specific permease; Provisional	NA|440aa|up_5|NZ_CP018995.1_2900004_2901324_-	PRK15433, PRK15433, branched-chain amino acid transporter carrier protein BrnQ	NA|432aa|up_4|NZ_CP018995.1_2901730_2903026_-	PRK11006, phoR, phosphate regulon sensor histidine kinase PhoR	NA|230aa|up_3|NZ_CP018995.1_2903083_2903773_-	PRK10161, PRK10161, phosphate response regulator transcription factor PhoB	NA|401aa|up_2|NZ_CP018995.1_2903962_2905165_+	PRK10966, PRK10966, exonuclease subunit SbcD; Provisional	NA|1048aa|up_1|NZ_CP018995.1_2905161_2908305_+	PRK10246, PRK10246, exonuclease subunit SbcC; Provisional	NA|395aa|up_0|NZ_CP018995.1_2908430_2909615_+	PRK10091, PRK10091, MFS transport protein AraJ; Provisional	NA|303aa|down_0|NZ_CP018995.1_2909859_2910768_-	PRK09557, PRK09557, fructokinase; Reviewed	NA|304aa|down_1|NZ_CP018995.1_2910892_2911804_+	COG2974, RdgC, DNA recombination-dependent growth factor C [DNA replication, recombination, and repair]	NA|28aa|down_2|NZ_CP018995.1_2911881_2911965_-	NA	NA|95aa|down_3|NZ_CP018995.1_2912451_2912736_-	PRK10579, PRK10579, pyrimidine/purine nucleoside phosphorylase	NA|226aa|down_4|NZ_CP018995.1_2912807_2913485_-	PRK10481, PRK10481, hypothetical protein; Provisional	NA|64aa|down_5|NZ_CP018995.1_2913742_2913934_-	PRK10380, PRK10380, hypothetical protein; Provisional	NA|175aa|down_6|NZ_CP018995.1_2913983_2914508_-	PRK03731, aroL, shikimate kinase AroL	NA|155aa|down_7|NZ_CP018995.1_2914684_2915149_-	PRK00124, PRK00124, YaiI/YqxD family protein	NA|270aa|down_8|NZ_CP018995.1_2915268_2916078_+	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed	NA|372aa|down_9|NZ_CP018995.1_2916094_2917210_-	PRK10245, adrA, diguanylate cyclase AdrA; Provisional
GCF_002012105.1_ASM201210v1	NZ_CP018995	Escherichia coli strain Ecol_AZ147 chromosome, complete genome	10	3355414-3355543	10	CRISPRCasFinder	no		cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,cas3,DEDDh,c2c9_V-U4,DinG	Orphan	GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCAT	40	0	0	NA	NA	NA	1	1	Orphan	cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,cas3,DEDDh,c2c9_V-U4,DinG,RT	NA,NA	NA|453aa|up_9|NZ_CP018995.1_3342988_3344347_-	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily	NA|96aa|up_8|NZ_CP018995.1_3344405_3344693_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_7|NZ_CP018995.1_3344689_3345976_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_6|NZ_CP018995.1_3346026_3346968_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|257aa|up_5|NZ_CP018995.1_3346982_3347753_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|381aa|up_4|NZ_CP018995.1_3349770_3350913_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|406aa|up_3|NZ_CP018995.1_3351041_3352259_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|518aa|up_2|NZ_CP018995.1_3352332_3353886_+	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|262aa|up_1|NZ_CP018995.1_3353994_3354780_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|up_0|NZ_CP018995.1_3354785_3355376_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_0|NZ_CP018995.1_3355584_3355980_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|1074aa|down_1|NZ_CP018995.1_3356241_3359463_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_2|NZ_CP018995.1_3359480_3360629_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|274aa|down_3|NZ_CP018995.1_3361084_3361906_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]	NA|305aa|down_4|NZ_CP018995.1_3362072_3362987_-	PRK10768, PRK10768, ribonucleoside hydrolase RihC; Provisional	NA|317aa|down_5|NZ_CP018995.1_3363052_3364003_-	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed	NA|150aa|down_6|NZ_CP018995.1_3364004_3364454_-	PRK15095, PRK15095, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional	NA|165aa|down_7|NZ_CP018995.1_3364578_3365073_-	PRK00376, lspA, lipoprotein signal peptidase	NA|939aa|down_8|NZ_CP018995.1_3365072_3367889_-	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed	NA|314aa|down_9|NZ_CP018995.1_3367931_3368873_-	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase
GCF_002012105.1_ASM201210v1	NZ_CP018995	Escherichia coli strain Ecol_AZ147 chromosome, complete genome	11	3514661-3514810	11	CRISPRCasFinder	no		cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,cas3,DEDDh,c2c9_V-U4,DinG	Orphan	TGAACGCCTTATCCGACCTACACAGCACTGAACTCGTAGGCCTGATAAGACGCG	54	0	0	NA	NA	NA	1	1	Orphan	cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,cas3,DEDDh,c2c9_V-U4,DinG,RT	NA,NA|528aa|down_6|NZ_CP018995.1_3522022_3523606_-	NA|185aa|up_9|NZ_CP018995.1_3501264_3501819_+	pfam07455, Psu, Phage polarity suppression protein (Psu)	NA|91aa|up_8|NZ_CP018995.1_3501820_3502093_+	pfam04606, Ogr_Delta, Ogr/Delta-like zinc finger	NA|346aa|up_7|NZ_CP018995.1_3502523_3503561_+	pfam08878, DUF1837, Domain of unknown function (DUF1837)	NA|850aa|up_6|NZ_CP018995.1_3503544_3506094_+	cd17921, DEXHc_Ski2, DEXH-box helicase domain of DEAD-like helicase Ski2 family proteins	NA|422aa|up_5|NZ_CP018995.1_3506143_3507409_-	PRK09692, PRK09692, integrase; Provisional	NA|340aa|up_4|NZ_CP018995.1_3507851_3508871_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|501aa|up_3|NZ_CP018995.1_3509000_3510503_+	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|361aa|up_2|NZ_CP018995.1_3510663_3511746_-	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|367aa|up_1|NZ_CP018995.1_3511745_3512846_-	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|504aa|up_0|NZ_CP018995.1_3513112_3514624_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|148aa|down_0|NZ_CP018995.1_3514977_3515421_+	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|952aa|down_1|NZ_CP018995.1_3515420_3518276_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|399aa|down_2|NZ_CP018995.1_3518329_3519526_-	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|168aa|down_3|NZ_CP018995.1_3519718_3520222_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|139aa|down_4|NZ_CP018995.1_3520267_3520684_-	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|335aa|down_5|NZ_CP018995.1_3520845_3521850_+	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|528aa|down_6|NZ_CP018995.1_3522022_3523606_-	NA	NA|151aa|down_7|NZ_CP018995.1_3523728_3524181_-	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|198aa|down_8|NZ_CP018995.1_3524325_3524919_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|238aa|down_9|NZ_CP018995.1_3524989_3525703_+	PRK12742, PRK12742, SDR family oxidoreductase
