assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002012145.1_ASM201214v1	NZ_CP019008	Escherichia coli strain Ecol_AZ159 chromosome, complete genome	1	1045033-1045184	1	CRISPRCasFinder	no		cas3,c2c9_V-U4,csa3,DEDDh,DinG,RT,WYL	Orphan	GGTGAGATAGGTGGTGTATACAGAGATGCCCGTGCTCATACTGACAGTCAGGT	53	0	0	NA	NA	NA	1	1	Orphan	cas3,c2c9_V-U4,csa3,DEDDh,DinG,RT,WYL	NA,NA	NA|79aa|up_9|NZ_CP019008.1_1035899_1036136_+	COG3311, AlpA, Predicted transcriptional regulator [Transcription]	NA|183aa|up_8|NZ_CP019008.1_1036413_1036962_+	pfam11726, Inovirus_Gp2, Inovirus Gp2	NA|160aa|up_7|NZ_CP019008.1_1036980_1037460_-	pfam04352, ProQ, ProQ/FINO family	NA|340aa|up_6|NZ_CP019008.1_1038025_1039045_-	cd01575, PBP1_GntR, ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators	NA|148aa|up_5|NZ_CP019008.1_1039302_1039746_+	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit	NA|91aa|up_4|NZ_CP019008.1_1039824_1040097_+	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|463aa|up_3|NZ_CP019008.1_1040119_1041508_+	PRK12996, ulaA, PTS ascorbate transporter subunit IIC	NA|277aa|up_2|NZ_CP019008.1_1041504_1042335_+	COG3959, COG3959, Transketolase, N-terminal subunit [Carbohydrate transport and metabolism]	NA|318aa|up_1|NZ_CP019008.1_1042327_1043281_+	COG3958, COG3958, Transketolase, C-terminal subunit [Carbohydrate transport and metabolism]	NA|38aa|up_0|NZ_CP019008.1_1043543_1043657_+	pfam01527, HTH_Tnp_1, Transposase	NA|152aa|down_0|NZ_CP019008.1_1045834_1046290_+	pfam08281, Sigma70_r4_2, Sigma-70, region 4	NA|113aa|down_1|NZ_CP019008.1_1046646_1046985_-	PRK13791, PRK13791, c-type lysozyme inhibitor	NA|230aa|down_2|NZ_CP019008.1_1047489_1048179_-	PRK01130, PRK01130, putative N-acetylmannosamine-6-phosphate 2-epimerase	NA|519aa|down_3|NZ_CP019008.1_1048178_1049735_-	TIGR02002, PTS_system_glucose-specific_IIABC_component, PTS system, glucose-specific IIBC component	NA|275aa|down_4|NZ_CP019008.1_1049900_1050725_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|448aa|down_5|NZ_CP019008.1_1050881_1052225_-	COG4222, COG4222, Uncharacterized protein conserved in bacteria [Function unknown]	NA|439aa|down_6|NZ_CP019008.1_1053719_1055036_-	PRK10974, PRK10974, sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA|657aa|down_7|NZ_CP019008.1_1057379_1059350_+	TIGR01785, Heme/hemopexin_utilization_protein_C, TonB-dependent heme/hemoglobin receptor family protein	NA|264aa|down_8|NZ_CP019008.1_1059368_1060160_+	pfam10670, DUF4198, Domain of unknown function (DUF4198)	NA|127aa|down_9|NZ_CP019008.1_1060739_1061120_+	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
GCF_002012145.1_ASM201214v1	NZ_CP019008	Escherichia coli strain Ecol_AZ159 chromosome, complete genome	2	2521574-2521697	2	CRISPRCasFinder	no	DEDDh	cas3,c2c9_V-U4,csa3,DEDDh,DinG,RT,WYL	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,c2c9_V-U4,csa3,DEDDh,DinG,RT,WYL	NA,NA|30aa|down_7|NZ_CP019008.1_2530593_2530683_+	NA|471aa|up_9|NZ_CP019008.1_2510939_2512352_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP019008.1_2512908_2513118_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP019008.1_2513573_2514200_+	PRK09898, PRK09898, ferredoxin-like protein	NA|730aa|up_6|NZ_CP019008.1_2514220_2516410_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|216aa|up_5|NZ_CP019008.1_2516413_2517061_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP019008.1_2517124_2517793_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP019008.1_2517789_2518575_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP019008.1_2518578_2519391_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP019008.1_2519402_2521007_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP019008.1_2521132_2521438_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP019008.1_2522011_2523268_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP019008.1_2523308_2524682_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP019008.1_2524896_2525538_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP019008.1_2525577_2526726_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP019008.1_2527016_2528228_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP019008.1_2528340_2529273_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP019008.1_2529269_2530295_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP019008.1_2530593_2530683_+	NA	NA|390aa|down_8|NZ_CP019008.1_2530848_2532018_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP019008.1_2532163_2532745_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_002012145.1_ASM201214v1	NZ_CP019008	Escherichia coli strain Ecol_AZ159 chromosome, complete genome	3	3214338-3214429	3	CRISPRCasFinder	no		cas3,c2c9_V-U4,csa3,DEDDh,DinG,RT,WYL	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,c2c9_V-U4,csa3,DEDDh,DinG,RT,WYL	NA|70aa|up_9|NZ_CP019008.1_3203588_3203798_-,NA	NA|70aa|up_9|NZ_CP019008.1_3203588_3203798_-	NA	NA|1321aa|up_8|NZ_CP019008.1_3203852_3207815_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NZ_CP019008.1_3207854_3208493_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NZ_CP019008.1_3208780_3209872_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NZ_CP019008.1_3209871_3210564_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP019008.1_3210575_3210962_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP019008.1_3210969_3211770_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP019008.1_3211779_3212370_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP019008.1_3212380_3212875_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP019008.1_3212895_3214224_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP019008.1_3214852_3215449_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP019008.1_3215469_3215697_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP019008.1_3215734_3216976_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|307aa|down_3|NZ_CP019008.1_3217510_3218431_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_4|NZ_CP019008.1_3218430_3218736_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_5|NZ_CP019008.1_3218990_3219590_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_6|NZ_CP019008.1_3219586_3222133_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_7|NZ_CP019008.1_3222132_3223305_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_8|NZ_CP019008.1_3223434_3224127_+	PRK10766, PRK10766, two-component system response regulator TorR	NA|343aa|down_9|NZ_CP019008.1_3224099_3225128_-	PRK10936, PRK10936, TMAO reductase system periplasmic protein TorT; Provisional
GCF_002012145.1_ASM201214v1	NZ_CP019008	Escherichia coli strain Ecol_AZ159 chromosome, complete genome	4	3336075-3336157	4	CRISPRCasFinder	no		cas3,c2c9_V-U4,csa3,DEDDh,DinG,RT,WYL	Orphan	ATCTGCCTGTACGGCAGTGAACT	23	0	0	NA	NA	I-F	1	1	Orphan	cas3,c2c9_V-U4,csa3,DEDDh,DinG,RT,WYL	NA,NA	NA|431aa|up_9|NZ_CP019008.1_3321072_3322365_-	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|448aa|up_8|NZ_CP019008.1_3322455_3323799_-	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|204aa|up_7|NZ_CP019008.1_3323809_3324421_-	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA	NA|1369aa|up_6|NZ_CP019008.1_3324579_3328686_-	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|165aa|up_5|NZ_CP019008.1_3328820_3329315_-	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|322aa|up_4|NZ_CP019008.1_3329858_3330824_+	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|589aa|up_3|NZ_CP019008.1_3330946_3332713_+	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|574aa|up_2|NZ_CP019008.1_3332713_3334435_+	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|235aa|up_1|NZ_CP019008.1_3334476_3335181_+	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|73aa|up_0|NZ_CP019008.1_3335465_3335684_+	PRK00276, infA, translation initiation factor IF-1; Validated	NA|759aa|down_0|NZ_CP019008.1_3336368_3338645_-	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	NA|107aa|down_1|NZ_CP019008.1_3338675_3338996_-	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|75aa|down_2|NZ_CP019008.1_3339318_3339543_+	PRK09937, PRK09937, cold shock-like protein CspD	NA|649aa|down_3|NZ_CP019008.1_3339615_3341562_-	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|372aa|down_4|NZ_CP019008.1_3341558_3342674_-	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|319aa|down_5|NZ_CP019008.1_3342824_3343781_+	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown]	NA|553aa|down_6|NZ_CP019008.1_3343777_3345436_-	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|232aa|down_7|NZ_CP019008.1_3345860_3346556_+	PRK05420, PRK05420, aquaporin Z; Provisional	NA|300aa|down_8|NZ_CP019008.1_3346970_3347870_+	COG2431, COG2431, Predicted membrane protein [Function unknown]	NA|551aa|down_9|NZ_CP019008.1_3348013_3349666_+	PRK05290, PRK05290, hybrid cluster protein; Provisional
