The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP017258	Campylobacter pinnipediorum subsp. caledonicus strain RM18021 chromosome, complete genome	1758337	319890	333024	1758337	integrase	Campylobacter_phage(21.43%)	23	326598:326613	331708:331723
WP_078422892.1|319890_320685_+	hypothetical protein	NA	M4SQR8	Cyanophage	40.3	2.0e-38
WP_078424269.1|320746_321706_+	RelA/SpoT domain-containing protein	NA	A0A1B0VBT5	Salmonella_phage	29.7	3.6e-21
WP_078422894.1|321698_321944_+	hypothetical protein	NA	NA	NA	NA	NA
WP_078422895.1|322074_322452_+	type II toxin-antitoxin system death-on-curing family toxin	NA	A0A1X9I6C0	Streptococcus_phage	34.4	2.1e-09
WP_078422896.1|322461_322653_+	hypothetical protein	NA	NA	NA	NA	NA
WP_078422897.1|322694_322964_-	hypothetical protein	NA	NA	NA	NA	NA
WP_078422898.1|323050_323290_+	hypothetical protein	NA	NA	NA	NA	NA
WP_078424270.1|323304_323529_+	helix-turn-helix transcriptional regulator	NA	M5A9C2	Nitratiruptor_phage	52.9	2.5e-10
WP_078415577.1|323567_323723_+	toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA	NA
WP_078424271.1|323857_324592_+	Rha family transcriptional regulator	NA	A0A192Y918	Salmonella_phage	30.1	1.2e-08
WP_157886652.1|324566_324707_+	hypothetical protein	NA	NA	NA	NA	NA
WP_089503398.1|324732_325545_+	phage recombination protein Bet	NA	A0A1P8BKG8	Lactococcus_phage	32.8	8.8e-13
WP_078422902.1|325544_325796_+	hypothetical protein	NA	X2CY11	Brucella_phage	44.4	1.1e-09
WP_078422903.1|325807_326026_+	hypothetical protein	NA	NA	NA	NA	NA
WP_078422904.1|326018_326534_+	single-stranded DNA-binding protein	NA	Q4ZC22	Staphylococcus_virus	46.2	3.5e-15
326598:326613	attL	TAATATCTTTTTAAAT	NA	NA	NA	NA
WP_078422905.1|326647_327064_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	X2KLV2	Campylobacter_phage	57.8	2.8e-39
WP_078424272.1|327308_328304_+	virulence RhuM family protein	NA	Q9JMN3	Wolbachia_phage	46.3	7.6e-75
WP_078422907.1|328305_328536_+	hypothetical protein	NA	X2KQ78	Campylobacter_phage	47.1	7.0e-08
WP_078424273.1|328962_329679_+	Rha family transcriptional regulator	NA	X2KM03	Campylobacter_phage	45.9	1.2e-32
WP_078422909.1|329786_329993_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_078424274.1|329943_331128_-|integrase	site-specific integrase	integrase	B7SYF8	Stenotrophomonas_phage	31.0	2.2e-44
WP_078422911.1|331724_332129_-	phosphorelay protein	NA	NA	NA	NA	NA
331708:331723	attR	TAATATCTTTTTAAAT	NA	NA	NA	NA
WP_078424275.1|332226_333024_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	38.2	1.6e-43
>prophage 2
NZ_CP017258	Campylobacter pinnipediorum subsp. caledonicus strain RM18021 chromosome, complete genome	1758337	1063540	1123459	1758337	terminase,tail,capsid,transposase,plate,tRNA,integrase	Campylobacter_phage(19.05%)	68	1059284:1059299	1073721:1073736
1059284:1059299	attL	TTTACAACCATATCTA	NA	NA	NA	NA
WP_078422781.1|1063540_1065559_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	A0A0M4U788	Ralstonia_phage	26.9	2.3e-17
WP_078422782.1|1065632_1066553_+	AAA family ATPase	NA	F6MII7	Haemophilus_phage	32.6	3.2e-27
WP_078422783.1|1066567_1066813_+	hypothetical protein	NA	NA	NA	NA	NA
WP_078422784.1|1066879_1067257_+	DUF1937 family protein	NA	NA	NA	NA	NA
WP_078424590.1|1067446_1067866_+	hypothetical protein	NA	NA	NA	NA	NA
WP_078422786.1|1067944_1068577_+	hypothetical protein	NA	NA	NA	NA	NA
WP_078422787.1|1068573_1068981_+	DUF1018 domain-containing protein	NA	NA	NA	NA	NA
WP_078422788.1|1068973_1069252_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157886643.1|1069281_1069458_+	hypothetical protein	NA	NA	NA	NA	NA
WP_078422789.1|1069454_1070141_+	hypothetical protein	NA	NA	NA	NA	NA
WP_078424591.1|1070162_1070600_+	hypothetical protein	NA	NA	NA	NA	NA
WP_078424592.1|1070664_1071126_-	phage virion morphogenesis protein	NA	A7YGZ0	Campylobacter_phage	42.6	3.8e-21
WP_078422795.1|1071249_1072464_-|capsid	minor capsid protein	capsid	A0A0M4UTA3	Ralstonia_phage	35.1	1.1e-32
WP_078424593.1|1072456_1073815_-	DUF935 family protein	NA	A0A2H4JHL1	uncultured_Caudovirales_phage	27.6	3.6e-19
1073721:1073736	attR	TTTACAACCATATCTA	NA	NA	NA	NA
WP_078424594.1|1073818_1075462_-|terminase	phage terminase large subunit	terminase	Q6TM76	Pseudomonas_phage	39.8	1.6e-93
WP_078422798.1|1075461_1075959_-	DUF1804 family protein	NA	NA	NA	NA	NA
WP_078422799.1|1075968_1076364_-	DUF1320 family protein	NA	NA	NA	NA	NA
WP_078422800.1|1076495_1077467_-	hypothetical protein	NA	NA	NA	NA	NA
WP_078424595.1|1077470_1077800_-	hypothetical protein	NA	NA	NA	NA	NA
WP_078422802.1|1077802_1078618_-	hypothetical protein	NA	A0A2K9VH54	Faecalibacterium_phage	31.1	1.4e-26
WP_078422803.1|1078614_1079103_-	hypothetical protein	NA	NA	NA	NA	NA
WP_078422804.1|1079261_1079681_+	hypothetical protein	NA	A0A1S5RFB5	Helicobacter_phage	39.0	2.3e-12
WP_078422805.1|1079680_1080034_+	hypothetical protein	NA	NA	NA	NA	NA
WP_078422806.1|1080026_1080266_+	hypothetical protein	NA	NA	NA	NA	NA
WP_078422807.1|1080262_1080448_+	hypothetical protein	NA	NA	NA	NA	NA
WP_078422808.1|1080449_1080722_+	hypothetical protein	NA	NA	NA	NA	NA
WP_078424880.1|1080734_1081268_+|plate	phage baseplate assembly protein V	plate	V5YUM9	Pseudomonas_phage	32.7	3.2e-11
WP_078422809.1|1081368_1081653_+|plate	baseplate assembly protein	plate	Q75QM0	Wolbachia_phage	42.5	4.1e-10
WP_078422810.1|1081649_1082735_+|plate	baseplate assembly protein	plate	V5YTH6	Pseudomonas_phage	28.4	9.9e-20
WP_078422811.1|1082731_1083352_+	hypothetical protein	NA	A0A2K9V471	Faecalibacterium_phage	34.3	1.3e-11
WP_078424596.1|1083348_1084788_+	hypothetical protein	NA	A0A1W6JT73	Escherichia_phage	28.7	5.5e-34
WP_078424597.1|1084797_1085409_+	hypothetical protein	NA	A0A0F6WBI7	Sinorhizobium_phage	51.7	6.4e-08
WP_078424598.1|1085795_1086956_+|tail	phage tail protein	tail	A7YGH4	Campylobacter_phage	46.9	1.4e-83
WP_078422815.1|1087130_1087646_+|tail	phage tail protein	tail	A7YGZ4	Campylobacter_phage	44.6	2.7e-31
WP_078424599.1|1087866_1088109_+|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_078424600.1|1088420_1088714_-	hypothetical protein	NA	NA	NA	NA	NA
WP_078424601.1|1088744_1091030_+|tail	phage tail tape measure protein	tail	A0A097I4X9	Vibrio_phage	38.3	1.2e-78
WP_078422819.1|1091034_1091406_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_078422820.1|1091402_1091594_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_078424602.1|1091587_1092562_+|tail	phage tail protein	tail	A0A088FRU7	Escherichia_phage	29.6	1.1e-17
WP_078424603.1|1092655_1093411_+	DNA adenine methylase	NA	A7YGI9	Campylobacter_phage	62.9	2.8e-85
WP_078424604.1|1093489_1094149_+	S24 family peptidase	NA	E8ZDN4	Streptococcus_phage	30.3	2.6e-07
WP_078424605.1|1094218_1095028_-	hypothetical protein	NA	NA	NA	NA	NA
WP_078424606.1|1095163_1097851_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_078424607.1|1098049_1099783_-	autotransporter domain-containing protein	NA	NA	NA	NA	NA
WP_078424608.1|1099951_1102711_-	autotransporter domain-containing protein	NA	NA	NA	NA	NA
WP_078424881.1|1102856_1103909_+	flagellar basal body P-ring protein FlgI	NA	NA	NA	NA	NA
WP_078387845.1|1103908_1104205_+	rod-binding protein	NA	NA	NA	NA	NA
WP_078423488.1|1104260_1104467_+	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA	NA
WP_078424609.1|1104482_1104902_+	flagellar biosynthesis protein FlgN	NA	NA	NA	NA	NA
WP_078424610.1|1104904_1106779_+	flagellar hook-associated protein FlgK	NA	NA	NA	NA	NA
WP_078424611.1|1106775_1107543_+	TIGR02757 family protein	NA	NA	NA	NA	NA
WP_078424612.1|1107828_1108653_-	pirin family protein	NA	NA	NA	NA	NA
WP_078423493.1|1108934_1110383_-	pyruvate kinase	NA	NA	NA	NA	NA
WP_078423494.1|1110662_1111379_+	molecular chaperone TorD family protein	NA	NA	NA	NA	NA
WP_141080429.1|1111399_1111570_+	Tat pathway signal protein	NA	NA	NA	NA	NA
WP_078423495.1|1111588_1112134_+	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_078424613.1|1112182_1114405_+	formate dehydrogenase subunit alpha	NA	NA	NA	NA	NA
WP_078423497.1|1114415_1115042_+	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA	NA
WP_078423498.1|1115038_1115980_+	formate dehydrogenase subunit gamma	NA	NA	NA	NA	NA
WP_078424614.1|1116028_1116811_+	formate dehydrogenase accessory sulfurtransferase FdhD	NA	NA	NA	NA	NA
WP_078423500.1|1116803_1117550_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_078423501.1|1117564_1117753_+	sodium-dependent tyrosine transporter	NA	NA	NA	NA	NA
WP_078423502.1|1117838_1118966_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	40.2	9.5e-74
WP_078424882.1|1119134_1120232_-	peptide chain release factor 2	NA	NA	NA	NA	NA
WP_078424615.1|1120325_1121147_+	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_078424616.1|1121149_1122457_+	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA	NA
WP_078424051.1|1122463_1123459_+|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
>prophage 3
NZ_CP017258	Campylobacter pinnipediorum subsp. caledonicus strain RM18021 chromosome, complete genome	1758337	1625416	1634556	1758337		Bacillus_phage(33.33%)	8	NA	NA
WP_078423902.1|1625416_1626499_+	diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	27.2	4.5e-12
WP_078423903.1|1626495_1627557_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	35.6	2.2e-16
WP_078424809.1|1627639_1628257_+	superoxide dismutase [Fe]	NA	Q56AR7	Bacillus_thuringiensis_phage	35.2	6.4e-24
WP_141080396.1|1628797_1629106_+	hypothetical protein	NA	NA	NA	NA	NA
WP_078423906.1|1629102_1629957_+	deoxyribonuclease IV	NA	M1PMK4	Moumouvirus	33.1	3.6e-33
WP_078424810.1|1629949_1631212_+	transporter	NA	NA	NA	NA	NA
WP_078423908.1|1631221_1632838_+	long-chain-fatty-acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	28.5	1.9e-35
WP_078424811.1|1632837_1634556_+	ATP-binding protein	NA	A0A0R6PCP6	Moraxella_phage	33.8	2.4e-20
