assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002024845.1_ASM202484v1	NZ_CP019722	Lactiplantibacillus plantarum strain CLP0611 chromosome, complete genome	1	114992-115687	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas9,cas1,cas2,csn2,csa3	WYL,csa3,cas9,cas1,cas2,csn2,DinG,cas3,DEDDh,RT	Type II-C,Type II-A,Type II-B	GTCTTGAATAGTAGTCATATCAAACAGGTTTAGAAC,GTCTTGAATAGTAGTCATATCAAACAGGTTTAGAAC,GTCTTGAATAGTAGTCATATCAAACAGGTTTAGAAC	36,36,36	0	0	NA	NA	NA:NA:NA	9,9,10	10	TypeII-C,TypeII-A,TypeII-B	WYL,csa3,cas9,cas1,cas2,csn2,DinG,cas3,DEDDh,RT	NA|236aa|up_5|NZ_CP019722.1_107030_107738_+,NA	NA|247aa|up_9|NZ_CP019722.1_102153_102894_+	COG2071, COG2071, Predicted glutamine amidotransferases [General function prediction only]	NA|531aa|up_8|NZ_CP019722.1_103137_104730_+	smart00910, HIRAN, The HIRAN protein (HIP116, Rad5p N-terminal) is found in the N-terminal regions of the SWI2/SNF2 proteins typified by HIP116 and Rad5p	NA|157aa|up_7|NZ_CP019722.1_104845_105316_-	cd04677, Nudix_Hydrolase_18, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|455aa|up_6|NZ_CP019722.1_105548_106913_+	PRK10746, PRK10746, putative transport protein YifK; Provisional	NA|236aa|up_5|NZ_CP019722.1_107030_107738_+	NA	NA|261aa|up_4|NZ_CP019722.1_107762_108545_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	cas9|1359aa|up_3|NZ_CP019722.1_108833_112910_+	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9	cas1|302aa|up_2|NZ_CP019722.1_113104_114010_+	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas2|102aa|up_1|NZ_CP019722.1_113987_114293_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|226aa|up_0|NZ_CP019722.1_114289_114967_+	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2	NA|913aa|down_0|NZ_CP019722.1_115751_118490_-	cd02080, P-type_ATPase_cation, P-type cation-transporting ATPase similar to Exiguobacterium aurantiacum Mna, an Na(+)-ATPase, and Synechocystis sp	NA|253aa|down_1|NZ_CP019722.1_118774_119533_+	cd09007, NP-I_spr0068, uncharacterized subfamily of the nucleoside phosphorylase-I family	NA|65aa|down_2|NZ_CP019722.1_119575_119770_-	pfam04024, PspC, PspC domain	NA|201aa|down_3|NZ_CP019722.1_119835_120438_-	pfam03358, FMN_red, NADPH-dependent FMN reductase	NA|158aa|down_4|NZ_CP019722.1_120550_121024_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|141aa|down_5|NZ_CP019722.1_121169_121592_+	cd06471, ACD_LpsHSP_like, Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18	NA|152aa|down_6|NZ_CP019722.1_121679_122135_-	pfam11457, DUF3021, Protein of unknown function (DUF3021)	NA|95aa|down_7|NZ_CP019722.1_122131_122416_-	smart00850, LytTR, LytTr DNA-binding domain	NA|411aa|down_8|NZ_CP019722.1_122804_124037_+	cd17391, MFS_MdtG_MDR_like, Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	csa3|100aa|down_9|NZ_CP019722.1_124127_124427_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors
GCF_002024845.1_ASM202484v1	NZ_CP019722	Lactiplantibacillus plantarum strain CLP0611 chromosome, complete genome	2	1263919-1264050	2	CRISPRCasFinder	no		WYL,csa3,cas9,cas1,cas2,csn2,DinG,cas3,DEDDh,RT	Orphan	GCCGCCATAAATGCGCCTAGCGCGGTAAGTTCGGCA	36	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas9,cas1,cas2,csn2,DinG,cas3,DEDDh,RT	NA|114aa|up_7|NZ_CP019722.1_1257240_1257582_-,NA	NA|235aa|up_9|NZ_CP019722.1_1254933_1255638_-	pfam13731, WxL, WxL domain surface cell wall-binding	NA|299aa|up_8|NZ_CP019722.1_1256111_1257008_-	PRK04405, prsA, peptidylprolyl isomerase; Provisional	NA|114aa|up_7|NZ_CP019722.1_1257240_1257582_-	NA	NA|151aa|up_6|NZ_CP019722.1_1257592_1258045_-	cd01277, HINT_subgroup, HINT (histidine triad nucleotide-binding protein) subgroup: Members of this CD belong to the superfamily of histidine triad hydrolases that act on alpha-phosphate of ribonucleotides	NA|246aa|up_5|NZ_CP019722.1_1258244_1258982_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|402aa|up_4|NZ_CP019722.1_1258974_1260180_+	pfam05975, EcsB, Bacterial ABC transporter protein EcsB	NA|262aa|up_3|NZ_CP019722.1_1260298_1261084_+	COG0510, ycfN, Thiamine kinase and related kinases [Coenzyme transport and metabolism]	NA|215aa|up_2|NZ_CP019722.1_1261169_1261814_+	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed	NA|108aa|up_1|NZ_CP019722.1_1261957_1262281_-	COG5584, COG5584, Predicted small secreted protein [Function unknown]	NA|214aa|up_0|NZ_CP019722.1_1262449_1263091_+	cd02796, tRNA_bind_bactPheRS, tRNA-binding-domain-containing prokaryotic phenylalanly tRNA synthetase (PheRS) beta chain	NA|437aa|down_0|NZ_CP019722.1_1266083_1267394_+	PRK00421, murC, UDP-N-acetylmuramate--L-alanine ligase; Provisional	NA|55aa|down_1|NZ_CP019722.1_1267682_1267847_-	pfam12669, P12, Virus attachment protein p12 family	NA|663aa|down_2|NZ_CP019722.1_1267863_1269852_-	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism]	NA|75aa|down_3|NZ_CP019722.1_1269853_1270078_-	pfam04023, FeoA, FeoA domain	NA|266aa|down_4|NZ_CP019722.1_1270333_1271131_+	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]	NA|434aa|down_5|NZ_CP019722.1_1271143_1272445_+	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]	NA|413aa|down_6|NZ_CP019722.1_1272428_1273667_+	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily	NA|156aa|down_7|NZ_CP019722.1_1273653_1274121_+	TIGR01994, Iron-sulfur_cluster_assembly_scaffold_protein_IscU, SUF system FeS assembly protein, NifU family	NA|469aa|down_8|NZ_CP019722.1_1274117_1275524_+	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB	NA|113aa|down_9|NZ_CP019722.1_1275817_1276156_+	COG2151, PaaD, Predicted metal-sulfur cluster biosynthetic enzyme [General function prediction only]
GCF_002024845.1_ASM202484v1	NZ_CP019722	Lactiplantibacillus plantarum strain CLP0611 chromosome, complete genome	3	1776113-1776414	3	CRISPRCasFinder	no		WYL,csa3,cas9,cas1,cas2,csn2,DinG,cas3,DEDDh,RT	Orphan	GCTTGGCTAAACGCATTGTCAGCTGTACTTTGAGCCTTAGCAGTAGC	47	0	0	NA	NA	NA	2	2	Orphan	WYL,csa3,cas9,cas1,cas2,csn2,DinG,cas3,DEDDh,RT	NA|295aa|up_2|NZ_CP019722.1_1772416_1773301_-,NA|54aa|up_1|NZ_CP019722.1_1773284_1773446_-,NA|85aa|up_0|NZ_CP019722.1_1773449_1773704_-,NA|64aa|down_3|NZ_CP019722.1_1785936_1786128_-,NA|128aa|down_4|NZ_CP019722.1_1786124_1786508_-,NA|128aa|down_6|NZ_CP019722.1_1787348_1787732_-,NA|147aa|down_7|NZ_CP019722.1_1787728_1788169_-	NA|395aa|up_9|NZ_CP019722.1_1763774_1764959_-	COG1316, LytR, Transcriptional regulator [Transcription]	NA|264aa|up_8|NZ_CP019722.1_1764939_1765731_-	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|581aa|up_7|NZ_CP019722.1_1765749_1767492_-	COG4986, COG4986, ABC-type anion transport system, duplicated permease component [Inorganic ion transport and metabolism]	NA|404aa|up_6|NZ_CP019722.1_1767970_1769182_-	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning]	NA|177aa|up_5|NZ_CP019722.1_1770422_1770953_-	COG5546, COG5546, Small integral membrane protein [Function unknown]	NA|88aa|up_4|NZ_CP019722.1_1770965_1771229_-	pfam10779, XhlA, Haemolysin XhlA	NA|391aa|up_3|NZ_CP019722.1_1771228_1772401_-	cd06415, GH25_Cpl1-like, Cpl-1 lysin (also known as Cpl-9 lysozyme / muramidase) is a bacterial cell wall endolysin encoded by the pneumococcal bacteriophage Cp-1, which cleaves the glycosidic N-acetylmuramoyl-(beta1,4)-N-acetylglucosamine bonds of the pneumococcal glycan chain, thus acting as an enzymatic antimicrobial agent (an enzybiotic) against streptococcal infections	NA|295aa|up_2|NZ_CP019722.1_1772416_1773301_-	NA	NA|54aa|up_1|NZ_CP019722.1_1773284_1773446_-	NA	NA|85aa|up_0|NZ_CP019722.1_1773449_1773704_-	NA	NA|790aa|down_0|NZ_CP019722.1_1776478_1778848_-	TIGR01665, structural_protein, phage minor structural protein, N-terminal region	NA|591aa|down_1|NZ_CP019722.1_1778911_1780684_-	pfam05709, Sipho_tail, Phage tail protein	NA|1723aa|down_2|NZ_CP019722.1_1780755_1785924_-	cd13402, LT_TF-like, lytic transglycosylase-like domain of tail fiber-like proteins and similar domains	NA|64aa|down_3|NZ_CP019722.1_1785936_1786128_-	NA	NA|128aa|down_4|NZ_CP019722.1_1786124_1786508_-	NA	NA|213aa|down_5|NZ_CP019722.1_1786709_1787348_-	pfam04630, Phage_TTP_1, Phage tail tube protein	NA|128aa|down_6|NZ_CP019722.1_1787348_1787732_-	NA	NA|147aa|down_7|NZ_CP019722.1_1787728_1788169_-	NA	NA|121aa|down_8|NZ_CP019722.1_1788158_1788521_-	TIGR01563, hypothetical_protein_AGR_C_1752, phage head-tail adaptor, putative, SPP1 family	NA|113aa|down_9|NZ_CP019722.1_1788504_1788843_-	cd08054, gp6, Head-Tail Connector Protein gp6 of Bacteriophage HK97 and similar proteins
GCF_002024845.1_ASM202484v1	NZ_CP019723	Lactiplantibacillus plantarum strain CLP0611 plasmid pUnnamed, complete sequence	1	30168-30324	1	CRISPRCasFinder	no	csa3	csa3	Type I-A	TGAACCCCTTGGTACAAGCGGACTTCTCAAAAAGAGA	37	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas9,cas1,cas2,csn2,DinG,cas3,DEDDh,RT	NA|72aa|up_9|NZ_CP019723.1_19198_19414_+,NA|153aa|up_3|NZ_CP019723.1_26824_27283_+,NA|83aa|up_0|NZ_CP019723.1_28900_29149_+,NA|62aa|down_1|NZ_CP019723.1_31385_31571_+,NA|93aa|down_3|NZ_CP019723.1_32237_32516_-,NA|76aa|down_4|NZ_CP019723.1_32538_32766_-	NA|72aa|up_9|NZ_CP019723.1_19198_19414_+	NA	NA|616aa|up_8|NZ_CP019723.1_21391_23239_-	cd07544, P-type_ATPase_HM, P-type heavy metal-transporting ATPase; uncharacterized subfamily	NA|87aa|up_7|NZ_CP019723.1_23557_23818_+	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|253aa|up_6|NZ_CP019723.1_23874_24633_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|35aa|up_5|NZ_CP019723.1_25178_25283_-	pfam16935, Hol_Tox, Putative Holin-like Toxin (Hol-Tox)	NA|267aa|up_4|NZ_CP019723.1_25822_26622_+	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|153aa|up_3|NZ_CP019723.1_26824_27283_+	NA	NA|198aa|up_2|NZ_CP019723.1_27390_27984_+	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|269aa|up_1|NZ_CP019723.1_28080_28887_+	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|83aa|up_0|NZ_CP019723.1_28900_29149_+	NA	NA|94aa|down_0|NZ_CP019723.1_31057_31339_+	TIGR02384, Putative_antitoxin_RelB, addiction module antitoxin, RelB/DinJ family	NA|62aa|down_1|NZ_CP019723.1_31385_31571_+	NA	NA|227aa|down_2|NZ_CP019723.1_31567_32248_+	COG4185, COG4185, Uncharacterized protein conserved in bacteria [Function unknown]	NA|93aa|down_3|NZ_CP019723.1_32237_32516_-	NA	NA|76aa|down_4|NZ_CP019723.1_32538_32766_-	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
