assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002025005.1_ASM202500v1	NZ_CP019979	Streptococcus agalactiae strain Sag158 chromosome, complete genome	1	673871-674087	1	CRT	no		cas3,cas9,cas1,cas2,csn2,csm6,DEDDh	Orphan	TCTGGAATGGGATCAAAGC	19	0	0	NA	NA	NA	3	3	Orphan	cas3,cas9,cas1,cas2,csn2,csm6,DEDDh	NA|109aa|up_9|NZ_CP019979.1_665266_665593_+,NA|123aa|up_3|NZ_CP019979.1_669447_669816_+,NA|109aa|up_2|NZ_CP019979.1_669824_670151_+,NA|140aa|up_0|NZ_CP019979.1_670734_671154_+,NA|357aa|down_7|NZ_CP019979.1_686576_687647_+,NA|433aa|down_8|NZ_CP019979.1_687668_688967_+,NA|71aa|down_9|NZ_CP019979.1_689193_689406_+	NA|109aa|up_9|NZ_CP019979.1_665266_665593_+	NA	NA|430aa|up_8|NZ_CP019979.1_665660_666950_+	pfam04860, Phage_portal, Phage portal protein	NA|233aa|up_7|NZ_CP019979.1_666942_667641_+	cd07016, S14_ClpP_1, Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease	NA|403aa|up_6|NZ_CP019979.1_667654_668863_+	TIGR01554, prophage_Lp3_protein_18, phage major capsid protein, HK97 family	NA|86aa|up_5|NZ_CP019979.1_668859_669117_+	cd08054, gp6, Head-Tail Connector Protein gp6 of Bacteriophage HK97 and similar proteins	NA|113aa|up_4|NZ_CP019979.1_669116_669455_+	pfam05521, Phage_H_T_join, Phage head-tail joining protein	NA|123aa|up_3|NZ_CP019979.1_669447_669816_+	NA	NA|109aa|up_2|NZ_CP019979.1_669824_670151_+	NA	NA|190aa|up_1|NZ_CP019979.1_670153_670723_+	TIGR01603, Uncharacterized_phage_related_protein, phage major tail protein, phi13 family	NA|140aa|up_0|NZ_CP019979.1_670734_671154_+	NA	NA|242aa|down_0|NZ_CP019979.1_674564_675290_+	COG4722, COG4722, Phage-related protein [Function unknown]	NA|972aa|down_1|NZ_CP019979.1_675289_678205_+	COG4926, PblB, Phage-related protein [Function unknown]	NA|378aa|down_2|NZ_CP019979.1_679440_680574_-	COG5433, COG5433, Transposase [DNA replication, recombination, and repair]	NA|133aa|down_3|NZ_CP019979.1_681416_681815_+	pfam05105, Phage_holin_4_1, Bacteriophage holin family	NA|36aa|down_4|NZ_CP019979.1_683358_683466_+	pfam16935, Hol_Tox, Putative Holin-like Toxin (Hol-Tox)	NA|414aa|down_5|NZ_CP019979.1_684003_685245_+	smart00857, Resolvase, Resolvase, N terminal domain	NA|435aa|down_6|NZ_CP019979.1_685189_686494_+	cd00338, Ser_Recombinase, Serine Recombinase family, catalytic domain; a DNA binding domain may be present either N- or C-terminal to the catalytic domain	NA|357aa|down_7|NZ_CP019979.1_686576_687647_+	NA	NA|433aa|down_8|NZ_CP019979.1_687668_688967_+	NA	NA|71aa|down_9|NZ_CP019979.1_689193_689406_+	NA
GCF_002025005.1_ASM202500v1	NZ_CP019979	Streptococcus agalactiae strain Sag158 chromosome, complete genome	2	972049-973932	1,1,2,2,3	PILER-CR,CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	cas9,cas1,cas2,csn2	cas3,cas9,cas1,cas2,csn2,csm6,DEDDh	Type II-A,Type II-C,Type II-B	GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC,GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC,GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC,AAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAGTAC,GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACT	36,36,36,43,37	4	4	973009-973038|973075-973104|973141-973170|973022-973044	NZ_CP019979.1_1192231-1192260|NZ_CP019979.1_579952-579981|NZ_CP019979.1_579952-579981|NZ_CP019979.1_1192236-1192258	II-A:II-A:II-A:II-A:II-A	20,27,28,20,20	28	TypeII-A,TypeII-C,TypeII-B	cas3,cas9,cas1,cas2,csn2,csm6,DEDDh	NA,NA|57aa|down_0|NZ_CP019979.1_974186_974357_+	NA|124aa|up_9|NZ_CP019979.1_961430_961802_+	pfam08349, DUF1722, Protein of unknown function (DUF1722)	NA|127aa|up_8|NZ_CP019979.1_961826_962207_+	TIGR02328, TIGR02328, conserved hypothetical protein	NA|377aa|up_7|NZ_CP019979.1_962298_963429_+	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|246aa|up_6|NZ_CP019979.1_963432_964170_+	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase	NA|257aa|up_5|NZ_CP019979.1_964170_964941_+	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|219aa|up_4|NZ_CP019979.1_964930_965587_+	COG4478, COG4478, Predicted membrane protein [Function unknown]	cas9|1371aa|up_3|NZ_CP019979.1_965974_970087_+	TIGR01865, conserved_hypothetical_protein, CRISPR subtype II/NMENI RNA-guided endonuclease Cas9/Csn1	cas1|290aa|up_2|NZ_CP019979.1_970088_970958_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|114aa|up_1|NZ_CP019979.1_970954_971296_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|222aa|up_0|NZ_CP019979.1_971282_971948_+	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2	NA|57aa|down_0|NZ_CP019979.1_974186_974357_+	NA	NA|139aa|down_1|NZ_CP019979.1_974489_974906_+	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|611aa|down_2|NZ_CP019979.1_975041_976874_+	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|378aa|down_3|NZ_CP019979.1_979051_980185_+	COG5433, COG5433, Transposase [DNA replication, recombination, and repair]	NA|304aa|down_4|NZ_CP019979.1_980168_981080_+	NF033188, internalin_H, InlH/InlC2 family class 1 internalin	NA|220aa|down_5|NZ_CP019979.1_981179_981839_+	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only]	NA|155aa|down_6|NZ_CP019979.1_981847_982312_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|145aa|down_7|NZ_CP019979.1_982311_982746_+	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|931aa|down_8|NZ_CP019979.1_982897_985690_+	COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism]	NA|368aa|down_9|NZ_CP019979.1_985689_986793_+	pfam11187, DUF2974, Protein of unknown function (DUF2974)
