assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002025105.1_ASM202510v1	NZ_CP020002	Bacillus thuringiensis strain Bacillus thuringiensis L-7601 chromosome, complete genome	1	626196-626271	1	CRISPRCasFinder	no	csa3	RT,cas3,cas14k,csa3,WYL,c2c9_V-U4,c2c10_CAS-V-U3,DinG,DEDDh	Type I-A	ATCATCATCATGGAGGACACAATCA	25	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,cas14k,csa3,WYL,c2c9_V-U4,c2c10_CAS-V-U3,DinG,DEDDh,cas14j	NA,NA	NA|335aa|up_9|NZ_CP020002.1_614917_615922_+	pfam01032, FecCD, FecCD transport family	NA|353aa|up_8|NZ_CP020002.1_615918_616977_+	pfam01032, FecCD, FecCD transport family	NA|274aa|up_7|NZ_CP020002.1_616989_617811_+	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|244aa|up_6|NZ_CP020002.1_617842_618574_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|397aa|up_5|NZ_CP020002.1_618787_619978_+	PRK06939, PRK06939, 2-amino-3-ketobutyrate coenzyme A ligase; Provisional	NA|322aa|up_4|NZ_CP020002.1_620022_620988_+	cd05272, TDH_SDR_e, L-threonine dehydrogenase, extended (e) SDRs	NA|141aa|up_3|NZ_CP020002.1_621047_621470_+	cd02883, Nudix_Hydrolase, Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|628aa|up_2|NZ_CP020002.1_621507_623391_-	COG4548, NorD, Nitric oxide reductase activation protein [Inorganic ion transport and metabolism]	NA|298aa|up_1|NZ_CP020002.1_623394_624288_-	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|510aa|up_0|NZ_CP020002.1_624415_625945_-	PRK12452, PRK12452, cardiolipin synthase	NA|568aa|down_0|NZ_CP020002.1_626994_628698_+	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase	NA|466aa|down_1|NZ_CP020002.1_628729_630127_-	TIGR00905, Arginine/ornithine_antiporter, transporter, basic amino acid/polyamine antiporter (APA) family	NA|237aa|down_2|NZ_CP020002.1_630579_631290_+	TIGR02404, Trehalose_operon_transcriptional_repressor, trehalose operon repressor, B	NA|476aa|down_3|NZ_CP020002.1_631432_632860_+	TIGR01992, phosphotransferase_system_trehalose_permease, PTS system, trehalose-specific IIBC component	NA|554aa|down_4|NZ_CP020002.1_632873_634535_+	TIGR02403, Trehalose-6-phosphate_hydrolase, alpha,alpha-phosphotrehalase	NA|375aa|down_5|NZ_CP020002.1_634567_635692_-	TIGR02887, Spore_germination_protein_B3, germination protein, Ger(x)C family	NA|369aa|down_6|NZ_CP020002.1_635672_636779_-	pfam03845, Spore_permease, Spore germination protein	NA|501aa|down_7|NZ_CP020002.1_636759_638262_-	pfam03323, GerA, Bacillus/Clostridium GerA spore germination protein	NA|324aa|down_8|NZ_CP020002.1_638450_639422_+	COG2334, COG2334, Putative homoserine kinase type II (protein kinase fold) [General function prediction only]	NA|487aa|down_9|NZ_CP020002.1_639581_641042_+	pfam01235, Na_Ala_symp, Sodium:alanine symporter family
GCF_002025105.1_ASM202510v1	NZ_CP020002	Bacillus thuringiensis strain Bacillus thuringiensis L-7601 chromosome, complete genome	2	5240103-5240219	2	CRISPRCasFinder	no		RT,cas3,cas14k,csa3,WYL,c2c9_V-U4,c2c10_CAS-V-U3,DinG,DEDDh	Orphan	CTTAAACAAGCGTTTGATTAATTCTCCATTTTTCTT	36	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,cas14k,csa3,WYL,c2c9_V-U4,c2c10_CAS-V-U3,DinG,DEDDh,cas14j	NA|115aa|up_4|NZ_CP020002.1_5237232_5237577_-,NA|176aa|down_0|NZ_CP020002.1_5240318_5240846_-,NA|62aa|down_5|NZ_CP020002.1_5244191_5244377_-	NA|262aa|up_9|NZ_CP020002.1_5232397_5233183_-	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]	NA|269aa|up_8|NZ_CP020002.1_5233421_5234228_-	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|271aa|up_7|NZ_CP020002.1_5234299_5235112_-	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|222aa|up_6|NZ_CP020002.1_5235135_5235801_-	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|342aa|up_5|NZ_CP020002.1_5235793_5236819_-	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]	NA|115aa|up_4|NZ_CP020002.1_5237232_5237577_-	NA	NA|100aa|up_3|NZ_CP020002.1_5237729_5238029_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|115aa|up_2|NZ_CP020002.1_5238041_5238386_-	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair]	NA|128aa|up_1|NZ_CP020002.1_5239116_5239500_-	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|122aa|up_0|NZ_CP020002.1_5239541_5239907_-	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC	NA|176aa|down_0|NZ_CP020002.1_5240318_5240846_-	NA	NA|216aa|down_1|NZ_CP020002.1_5240990_5241638_+	cd03386, PAP2_Aur1_like, PAP2_like proteins, Aur1_like subfamily	NA|338aa|down_2|NZ_CP020002.1_5241697_5242711_-	pfam13303, PTS_EIIC_2, Phosphotransferase system, EIIC	NA|390aa|down_3|NZ_CP020002.1_5242733_5243903_-	cd05291, HicDH_like, L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases	NA|83aa|down_4|NZ_CP020002.1_5243929_5244178_-	pfam07875, Coat_F, Coat F domain	NA|62aa|down_5|NZ_CP020002.1_5244191_5244377_-	NA	NA|238aa|down_6|NZ_CP020002.1_5244520_5245234_-	pfam02517, Abi, CAAX protease self-immunity	NA|183aa|down_7|NZ_CP020002.1_5245699_5246248_-	pfam13305, WHG, WHG domain	NA|241aa|down_8|NZ_CP020002.1_5246251_5246974_-	cd07721, yflN-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis yflN; MBL-fold metallo hydrolase domain	NA|601aa|down_9|NZ_CP020002.1_5247112_5248915_-	cd01161, VLCAD, Very long chain acyl-CoA dehydrogenase
GCF_002025105.1_ASM202510v1	NZ_CP020002	Bacillus thuringiensis strain Bacillus thuringiensis L-7601 chromosome, complete genome	3	5569508-5569641	3	CRISPRCasFinder	no		RT,cas3,cas14k,csa3,WYL,c2c9_V-U4,c2c10_CAS-V-U3,DinG,DEDDh	Orphan	GTTGATTTCTCTTCTTTTTGAGA	23	0	0	NA	NA	NA	2	2	Orphan	RT,cas3,cas14k,csa3,WYL,c2c9_V-U4,c2c10_CAS-V-U3,DinG,DEDDh,cas14j	NA|45aa|up_0|NZ_CP020002.1_5569185_5569320_-,NA	NA|604aa|up_9|NZ_CP020002.1_5559981_5561793_-	COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]	NA|294aa|up_8|NZ_CP020002.1_5561853_5562735_-	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]	NA|256aa|up_7|NZ_CP020002.1_5562982_5563750_-	COG4464, CapC, Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|234aa|up_6|NZ_CP020002.1_5563862_5564564_-	cd05387, BY-kinase, bacterial tyrosine-kinase	NA|248aa|up_5|NZ_CP020002.1_5564553_5565297_-	COG3944, COG3944, Capsular polysaccharide biosynthesis protein [Cell envelope biogenesis, outer membrane]	NA|226aa|up_4|NZ_CP020002.1_5565559_5566237_-	cd05387, BY-kinase, bacterial tyrosine-kinase	NA|145aa|up_3|NZ_CP020002.1_5566578_5567013_-	PRK00006, fabZ, 3-hydroxyacyl-ACP dehydratase FabZ	NA|334aa|up_2|NZ_CP020002.1_5567442_5568444_-	PRK13928, PRK13928, rod shape-determining protein Mbl; Provisional	NA|91aa|up_1|NZ_CP020002.1_5568604_5568877_-	pfam12116, SpoIIID, Stage III sporulation protein D	NA|45aa|up_0|NZ_CP020002.1_5569185_5569320_-	NA	NA|236aa|down_0|NZ_CP020002.1_5570529_5571237_-	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|281aa|down_1|NZ_CP020002.1_5571236_5572079_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|336aa|down_2|NZ_CP020002.1_5572260_5573268_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|340aa|down_3|NZ_CP020002.1_5573366_5574386_-	TIGR02870, Stage_II_sporulation_protein_D, stage II sporulation protein D	NA|435aa|down_4|NZ_CP020002.1_5574594_5575899_-	PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated	NA|237aa|down_5|NZ_CP020002.1_5575938_5576649_-	pfam08680, DUF1779, TATA-box binding	NA|79aa|down_6|NZ_CP020002.1_5576694_5576931_-	COG4836, COG4836, Predicted membrane protein [Function unknown]	NA|507aa|down_7|NZ_CP020002.1_5577133_5578654_-	PRK05777, PRK05777, NADH-quinone oxidoreductase subunit NuoN	NA|501aa|down_8|NZ_CP020002.1_5578655_5580158_-	PRK05846, PRK05846, NADH:ubiquinone oxidoreductase subunit M; Reviewed	NA|621aa|down_9|NZ_CP020002.1_5580154_5582017_-	PRK06590, PRK06590, NADH:ubiquinone oxidoreductase subunit L; Reviewed
GCF_002025105.1_ASM202510v1	NZ_CP020002	Bacillus thuringiensis strain Bacillus thuringiensis L-7601 chromosome, complete genome	4	5657369-5657476	4	CRISPRCasFinder	no		RT,cas3,cas14k,csa3,WYL,c2c9_V-U4,c2c10_CAS-V-U3,DinG,DEDDh	Orphan	CCGCTTCCGCTTTTCTTTATTGTC	24	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,cas14k,csa3,WYL,c2c9_V-U4,c2c10_CAS-V-U3,DinG,DEDDh,cas14j	NA|125aa|up_0|NZ_CP020002.1_5656335_5656710_+,NA	NA|49aa|up_9|NZ_CP020002.1_5636589_5636736_-	pfam05968, Bacillus_PapR, Bacillus PapR protein	NA|286aa|up_8|NZ_CP020002.1_5636824_5637682_-	pfam18768, HTH_Bact, Helix-turn-helix bacterial domain	NA|201aa|up_7|NZ_CP020002.1_5639642_5640245_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|377aa|up_6|NZ_CP020002.1_5640241_5641372_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|245aa|up_5|NZ_CP020002.1_5641372_5642107_-	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|301aa|up_4|NZ_CP020002.1_5642103_5643006_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|265aa|up_3|NZ_CP020002.1_5643163_5643958_+	PRK12896, PRK12896, methionine aminopeptidase; Reviewed	NA|3191aa|up_2|NZ_CP020002.1_5644726_5654299_+	COG4932, COG4932, Predicted outer membrane protein [Cell envelope biogenesis, outer membrane]	NA|467aa|up_1|NZ_CP020002.1_5654788_5656189_+	cd05661, M28_like_PA, M28 Zn-peptidase containing a PA domain insert	NA|125aa|up_0|NZ_CP020002.1_5656335_5656710_+	NA	NA|557aa|down_0|NZ_CP020002.1_5657593_5659264_-	PRK01611, argS, arginyl-tRNA synthetase; Reviewed	NA|146aa|down_1|NZ_CP020002.1_5659263_5659701_-	pfam09148, DUF1934, Domain of unknown function (DUF1934)	NA|329aa|down_2|NZ_CP020002.1_5659903_5660890_+	cd07062, Peptidase_S66_mccF_like, Microcin C7 self-immunity protein determines resistance to exogenous microcin C7	NA|121aa|down_3|NZ_CP020002.1_5660915_5661278_-	COG5294, COG5294, Uncharacterized protein conserved in bacteria [Function unknown]	NA|346aa|down_4|NZ_CP020002.1_5661512_5662550_+	pfam13303, PTS_EIIC_2, Phosphotransferase system, EIIC	NA|291aa|down_5|NZ_CP020002.1_5662801_5663674_-	TIGR01230, Agmatinase_Agmatine_ureohydrolase_AUH	NA|276aa|down_6|NZ_CP020002.1_5663893_5664721_-	PRK00811, PRK00811, polyamine aminopropyltransferase	NA|388aa|down_7|NZ_CP020002.1_5664885_5666049_-	cd17474, MFS_YfmO_like, Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily	NA|136aa|down_8|NZ_CP020002.1_5666054_5666462_-	cd04774, HTH_YfmP, Helix-Turn-Helix DNA binding domain of the YfmP transcription regulator	NA|242aa|down_9|NZ_CP020002.1_5666614_5667340_+	cd08563, GDPD_TtGDE_like, Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins
