assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002055605.1_ASM205560v1	NZ_CP020092	Escherichia coli strain 13E0725 chromosome, complete genome	1	758738-758989	1	PILER-CR	no		cas3,c2c9_V-U4,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas1,DEDDh,DinG,RT	Orphan	TTTTGGAGGAGCAGAAAGATGAATGACTGTCCACGACGCTATACCCAAAAGAAA	54	0	0	NA	NA	NA	2	2	Orphan	cas3,c2c9_V-U4,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas1,DEDDh,DinG,RT	NA,NA	NA|158aa|up_9|NZ_CP020092.1_748312_748786_-	PRK11425, PRK11425, PTS N-acetylgalactosamine transporter subunit IIB	NA|427aa|up_8|NZ_CP020092.1_748808_750089_-	PRK15458, PRK15458, tagatose 6-phosphate aldolase subunit KbaZ; Provisional	NA|270aa|up_7|NZ_CP020092.1_750337_751147_+	PRK09802, PRK09802, DeoR family transcriptional regulator	NA|155aa|up_6|NZ_CP020092.1_751201_751666_-	pfam11663, Toxin_YhaV, Toxin with endonuclease activity, of toxin-antitoxin system	NA|112aa|up_5|NZ_CP020092.1_751665_752001_-	PRK09974, PRK09974, type II toxin-antitoxin system PrlF family antitoxin	NA|524aa|up_4|NZ_CP020092.1_752149_753721_-	TIGR03248, galactar-dH20, galactarate dehydratase	NA|445aa|up_3|NZ_CP020092.1_754095_755430_+	TIGR00893, Probable_glucarate_transporter, D-galactonate transporter	NA|257aa|up_2|NZ_CP020092.1_755445_756216_+	PRK10558, PRK10558, alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional	NA|297aa|up_1|NZ_CP020092.1_756245_757136_+	PRK11559, garR, tartronate semialdehyde reductase; Provisional	NA|382aa|up_0|NZ_CP020092.1_757232_758378_+	PRK10342, PRK10342, glycerate kinase I; Provisional	NA|327aa|down_0|NZ_CP020092.1_759248_760229_-	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|115aa|down_1|NZ_CP020092.1_762569_762914_-	PRK11424, PRK11424, DNA-binding transcriptional activator TdcR; Provisional	NA|313aa|down_2|NZ_CP020092.1_763102_764041_+	PRK10341, PRK10341, transcriptional regulator TdcA	NA|330aa|down_3|NZ_CP020092.1_764139_765129_+	PRK08638, PRK08638, bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA|444aa|down_4|NZ_CP020092.1_765150_766482_+	PRK13629, PRK13629, threonine/serine transporter TdcC; Provisional	NA|403aa|down_5|NZ_CP020092.1_766507_767716_+	PRK12379, PRK12379, propionate kinase	NA|765aa|down_6|NZ_CP020092.1_767749_770044_+	cd01678, PFL1, Pyruvate formate lyase 1	NA|130aa|down_7|NZ_CP020092.1_770057_770447_+	PRK11401, PRK11401, enamine/imine deaminase	NA|455aa|down_8|NZ_CP020092.1_770518_771883_+	PRK15040, PRK15040, L-serine ammonia-lyase	NA|444aa|down_9|NZ_CP020092.1_772157_773489_+	TIGR00814, membrane_transport_protein_YhjV, serine transporter
GCF_002055605.1_ASM205560v1	NZ_CP020092	Escherichia coli strain 13E0725 chromosome, complete genome	2	774848-774965	1	CRISPRCasFinder	no		cas3,c2c9_V-U4,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas1,DEDDh,DinG,RT	Orphan	TGCCGGATGCGATGCTGGCGCACCTTATCCGGCCTACGGG	40	0	0	NA	NA	NA	1	1	Orphan	cas3,c2c9_V-U4,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas1,DEDDh,DinG,RT	NA,NA|55aa|down_0|NZ_CP020092.1_775038_775203_-	NA|115aa|up_9|NZ_CP020092.1_762569_762914_-	PRK11424, PRK11424, DNA-binding transcriptional activator TdcR; Provisional	NA|313aa|up_8|NZ_CP020092.1_763102_764041_+	PRK10341, PRK10341, transcriptional regulator TdcA	NA|330aa|up_7|NZ_CP020092.1_764139_765129_+	PRK08638, PRK08638, bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA|444aa|up_6|NZ_CP020092.1_765150_766482_+	PRK13629, PRK13629, threonine/serine transporter TdcC; Provisional	NA|403aa|up_5|NZ_CP020092.1_766507_767716_+	PRK12379, PRK12379, propionate kinase	NA|765aa|up_4|NZ_CP020092.1_767749_770044_+	cd01678, PFL1, Pyruvate formate lyase 1	NA|130aa|up_3|NZ_CP020092.1_770057_770447_+	PRK11401, PRK11401, enamine/imine deaminase	NA|455aa|up_2|NZ_CP020092.1_770518_771883_+	PRK15040, PRK15040, L-serine ammonia-lyase	NA|444aa|up_1|NZ_CP020092.1_772157_773489_+	TIGR00814, membrane_transport_protein_YhjV, serine transporter	NA|437aa|up_0|NZ_CP020092.1_773516_774827_+	COG3681, COG3681, L-cysteine desulfidase [Amino acid transport and metabolism]	NA|55aa|down_0|NZ_CP020092.1_775038_775203_-	NA	NA|234aa|down_1|NZ_CP020092.1_775225_775927_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|299aa|down_2|NZ_CP020092.1_776031_776928_+	cd08431, PBP2_HupR, The C-terminal substrate binding domain of LysR-type transcriptional regulator, HupR, which regulates expression of the heme uptake receptor HupA; contains the type 2 periplasmic binding fold	NA|119aa|down_3|NZ_CP020092.1_776978_777335_-	COG3152, COG3152, Predicted membrane protein [Function unknown]	NA|122aa|down_4|NZ_CP020092.1_777576_777942_-	COG3152, COG3152, Predicted membrane protein [Function unknown]	NA|329aa|down_5|NZ_CP020092.1_778234_779221_-	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|161aa|down_6|NZ_CP020092.1_779290_779773_-	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|100aa|down_7|NZ_CP020092.1_779868_780168_-	pfam13997, YqjK, YqjK-like protein	NA|135aa|down_8|NZ_CP020092.1_780157_780562_-	COG5393, COG5393, Predicted membrane protein [Function unknown]	NA|102aa|down_9|NZ_CP020092.1_780564_780870_-	COG4575, ElaB, Uncharacterized conserved protein [Function unknown]
GCF_002055605.1_ASM205560v1	NZ_CP020092	Escherichia coli strain 13E0725 chromosome, complete genome	3	1240568-1240962	2,2,1	PILER-CR,CRISPRCasFinder,CRT	no		cas3,c2c9_V-U4,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas1,DEDDh,DinG,RT	Orphan	GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	6,6,6	6	Orphan	cas3,c2c9_V-U4,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas1,DEDDh,DinG,RT	NA|47aa|up_1|NZ_CP020092.1_1239277_1239418_-,NA	NA|434aa|up_9|NZ_CP020092.1_1229974_1231276_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_8|NZ_CP020092.1_1231323_1233558_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_7|NZ_CP020092.1_1233635_1233884_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_6|NZ_CP020092.1_1233883_1234219_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_5|NZ_CP020092.1_1234289_1235081_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_4|NZ_CP020092.1_1235308_1236946_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_3|NZ_CP020092.1_1237033_1238332_+	PRK00077, eno, enolase; Provisional	NA|291aa|up_2|NZ_CP020092.1_1238391_1239264_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|47aa|up_1|NZ_CP020092.1_1239277_1239418_-	NA	NA|224aa|up_0|NZ_CP020092.1_1239556_1240228_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP020092.1_1241600_1243079_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP020092.1_1243105_1244383_-	cd06174, MFS, Major Facilitator Superfamily	NA|485aa|down_2|NZ_CP020092.1_1246332_1247787_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|446aa|down_3|NZ_CP020092.1_1247880_1249218_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_4|NZ_CP020092.1_1249195_1249975_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_5|NZ_CP020092.1_1249971_1250832_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_6|NZ_CP020092.1_1250979_1251555_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_7|NZ_CP020092.1_1251571_1251832_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_8|NZ_CP020092.1_1251822_1253094_-	PRK10015, PRK10015, oxidoreductase; Provisional	NA|122aa|down_9|NZ_CP020092.1_1253171_1253537_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)
GCF_002055605.1_ASM205560v1	NZ_CP020092	Escherichia coli strain 13E0725 chromosome, complete genome	4	1267437-1268015	3,2,3	CRISPRCasFinder,CRT,PILER-CR	no	cas3,cas8e,cse2gr11,cas7,cas5,cas1	cas3,c2c9_V-U4,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas1,DEDDh,DinG,RT	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	9,9,5	9	TypeI-E	cas3,c2c9_V-U4,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas1,DEDDh,DinG,RT	NA,NA	NA|600aa|up_9|NZ_CP020092.1_1253852_1255652_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|571aa|up_8|NZ_CP020092.1_1255651_1257364_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_7|NZ_CP020092.1_1257437_1258172_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|51aa|up_6|NZ_CP020092.1_1258436_1258589_+	pfam01848, HOK_GEF, Hok/gef family	cas3|900aa|up_5|NZ_CP020092.1_1258782_1261482_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|521aa|up_4|NZ_CP020092.1_1261579_1263142_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|179aa|up_3|NZ_CP020092.1_1263138_1263675_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|352aa|up_2|NZ_CP020092.1_1263686_1264742_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_1|NZ_CP020092.1_1264752_1265499_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas1|307aa|up_0|NZ_CP020092.1_1266126_1267047_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	NA|346aa|down_0|NZ_CP020092.1_1268096_1269134_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP020092.1_1269385_1270294_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP020092.1_1270295_1271723_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP020092.1_1271722_1272328_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP020092.1_1272377_1272701_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP020092.1_1272894_1273206_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP020092.1_1273224_1273935_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP020092.1_1273934_1274414_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP020092.1_1274410_1275460_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP020092.1_1275440_1276202_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_002055605.1_ASM205560v1	NZ_CP020092	Escherichia coli strain 13E0725 chromosome, complete genome	5	2514165-2514288	4	CRISPRCasFinder	no	DEDDh	cas3,c2c9_V-U4,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas1,DEDDh,DinG,RT	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,c2c9_V-U4,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas1,DEDDh,DinG,RT	NA,NA|30aa|down_7|NZ_CP020092.1_2523184_2523274_+	NA|471aa|up_9|NZ_CP020092.1_2503618_2505031_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP020092.1_2505587_2505797_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP020092.1_2506252_2506879_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP020092.1_2506899_2509002_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|216aa|up_5|NZ_CP020092.1_2509005_2509653_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP020092.1_2509716_2510385_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP020092.1_2510381_2511167_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP020092.1_2511170_2511983_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP020092.1_2511994_2513599_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP020092.1_2513724_2514030_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP020092.1_2514602_2515859_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP020092.1_2515899_2517273_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP020092.1_2517487_2518129_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP020092.1_2518168_2519317_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP020092.1_2519607_2520819_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP020092.1_2520931_2521864_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP020092.1_2521860_2522886_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP020092.1_2523184_2523274_+	NA	NA|194aa|down_8|NZ_CP020092.1_2524754_2525336_-	PRK10543, PRK10543, superoxide dismutase [Fe]	NA|272aa|down_9|NZ_CP020092.1_2525463_2526279_-	pfam00877, NLPC_P60, NlpC/P60 family
GCF_002055605.1_ASM205560v1	NZ_CP020092	Escherichia coli strain 13E0725 chromosome, complete genome	6	3227875-3227966	5	CRISPRCasFinder	no		cas3,c2c9_V-U4,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas1,DEDDh,DinG,RT	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,c2c9_V-U4,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas1,DEDDh,DinG,RT	NA|70aa|up_9|NZ_CP020092.1_3217125_3217335_-,NA	NA|70aa|up_9|NZ_CP020092.1_3217125_3217335_-	NA	NA|1321aa|up_8|NZ_CP020092.1_3217389_3221352_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NZ_CP020092.1_3221391_3222030_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NZ_CP020092.1_3222317_3223409_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NZ_CP020092.1_3223408_3224101_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP020092.1_3224112_3224499_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP020092.1_3224506_3225307_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP020092.1_3225316_3225907_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP020092.1_3225917_3226412_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP020092.1_3226432_3227761_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP020092.1_3228389_3228986_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP020092.1_3229006_3229234_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP020092.1_3229271_3230513_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|418aa|down_3|NZ_CP020092.1_3230805_3232059_-	PRK09784, PRK09784, YccE family protein	NA|307aa|down_4|NZ_CP020092.1_3232318_3233239_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_5|NZ_CP020092.1_3233238_3233544_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_6|NZ_CP020092.1_3233636_3234236_-	PRK04976, torD, chaperone protein TorD; Validated	NA|852aa|down_7|NZ_CP020092.1_3234223_3236779_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_8|NZ_CP020092.1_3236778_3237951_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_9|NZ_CP020092.1_3238080_3238773_+	PRK10766, PRK10766, two-component system response regulator TorR
GCF_002055605.1_ASM205560v1	NZ_CP020092	Escherichia coli strain 13E0725 chromosome, complete genome	7	3565072-3565216	6	CRISPRCasFinder	no		cas3,c2c9_V-U4,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas1,DEDDh,DinG,RT	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	52	0	0	NA	NA	NA	1	1	Orphan	cas3,c2c9_V-U4,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas1,DEDDh,DinG,RT	NA,NA	NA|330aa|up_9|NZ_CP020092.1_3552969_3553959_-	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|303aa|up_8|NZ_CP020092.1_3554355_3555264_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|674aa|up_7|NZ_CP020092.1_3555455_3557477_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|226aa|up_6|NZ_CP020092.1_3558056_3558734_-	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD	NA|252aa|up_5|NZ_CP020092.1_3558726_3559482_-	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional	NA|385aa|up_4|NZ_CP020092.1_3559468_3560623_-	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|347aa|up_3|NZ_CP020092.1_3560619_3561660_-	PRK15108, PRK15108, biotin synthase; Provisional	NA|430aa|up_2|NZ_CP020092.1_3561746_3563036_+	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated	NA|159aa|up_1|NZ_CP020092.1_3563094_3563571_+	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional	NA|428aa|up_0|NZ_CP020092.1_3563722_3565006_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|754aa|down_0|NZ_CP020092.1_3565239_3567501_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|478aa|down_1|NZ_CP020092.1_3567683_3569117_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|351aa|down_2|NZ_CP020092.1_3569192_3570245_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|318aa|down_3|NZ_CP020092.1_3570428_3571382_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_4|NZ_CP020092.1_3571422_3572418_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_5|NZ_CP020092.1_3572572_3573391_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_6|NZ_CP020092.1_3573391_3574450_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_7|NZ_CP020092.1_3574452_3575142_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_8|NZ_CP020092.1_3575141_3575915_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|50aa|down_9|NZ_CP020092.1_3576080_3576230_-	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ
GCF_002055605.1_ASM205560v1	NZ_CP020092	Escherichia coli strain 13E0725 chromosome, complete genome	8	4372492-4372624	4	PILER-CR	no		cas3,c2c9_V-U4,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas1,DEDDh,DinG,RT	Orphan	ATCACCAATATTGAAAA	17	0	0	NA	NA	NA	2	2	Orphan	cas3,c2c9_V-U4,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas1,DEDDh,DinG,RT	NA|156aa|up_9|NZ_CP020092.1_4363733_4364201_+,NA	NA|156aa|up_9|NZ_CP020092.1_4363733_4364201_+	NA	NA|60aa|up_8|NZ_CP020092.1_4364299_4364479_-	pfam07362, CcdA, Post-segregation antitoxin CcdA	NA|160aa|up_7|NZ_CP020092.1_4364499_4364979_-	PRK10769, folA, type 3 dihydrofolate reductase	NA|621aa|up_6|NZ_CP020092.1_4365170_4367033_-	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|177aa|up_5|NZ_CP020092.1_4367025_4367556_-	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF	NA|444aa|up_4|NZ_CP020092.1_4367663_4368995_-	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily	NA|96aa|up_3|NZ_CP020092.1_4369053_4369341_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_2|NZ_CP020092.1_4369337_4370624_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_1|NZ_CP020092.1_4370674_4371616_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|257aa|up_0|NZ_CP020092.1_4371630_4372401_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|505aa|down_0|NZ_CP020092.1_4372874_4374389_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|down_1|NZ_CP020092.1_4374419_4375562_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|406aa|down_2|NZ_CP020092.1_4375690_4376908_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|518aa|down_3|NZ_CP020092.1_4376981_4378535_+	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|262aa|down_4|NZ_CP020092.1_4378643_4379429_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|down_5|NZ_CP020092.1_4379434_4380025_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_6|NZ_CP020092.1_4380110_4380506_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|1074aa|down_7|NZ_CP020092.1_4380766_4383988_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_8|NZ_CP020092.1_4384005_4385154_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|274aa|down_9|NZ_CP020092.1_4385609_4386431_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]
