assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002068155.1_ASM206815v1	NZ_CP020352	Bacillus paralicheniformis strain MDJK30 chromosome, complete genome	1	57448-57529	1	CRISPRCasFinder	no	cas3	cas3,csa3,WYL,DinG,DEDDh	Unclear	TGCACGGGCGCATGCATTTGTAC	23	0	0	NA	NA	NA	1	1	Unclear	cas3,csa3,WYL,DinG,DEDDh	NA,NA	NA|292aa|up_9|NZ_CP020352.1_47829_48705_+	COG0313, COG0313, Predicted methyltransferases [General function prediction only]	NA|97aa|up_8|NZ_CP020352.1_48754_49045_-	COG2002, AbrB, Regulators of stationary/sporulation gene expression [Transcription]	NA|663aa|up_7|NZ_CP020352.1_49552_51541_+	PRK12267, PRK12267, methionyl-tRNA synthetase; Reviewed	NA|256aa|up_6|NZ_CP020352.1_51624_52392_+	COG0084, TatD, Mg-dependent DNase [DNA replication, recombination, and repair]	NA|399aa|up_5|NZ_CP020352.1_52636_53833_+	COG3583, COG3583, Uncharacterized protein conserved in bacteria [Function unknown]	NA|187aa|up_4|NZ_CP020352.1_54000_54561_+	TIGR00334, Ribonuclease_M5, ribonuclease M5	NA|293aa|up_3|NZ_CP020352.1_54553_55432_+	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	NA|294aa|up_2|NZ_CP020352.1_55591_56473_+	TIGR02855, Sporulation-specific_protease_YabG, sporulation peptidase YabG	NA|87aa|up_1|NZ_CP020352.1_56697_56958_+	COG4466, Veg, Uncharacterized protein conserved in bacteria [Function unknown]	NA|62aa|up_0|NZ_CP020352.1_57114_57300_+	pfam00269, SASP, Small, acid-soluble spore proteins, alpha/beta type	NA|290aa|down_0|NZ_CP020352.1_57595_58465_+	PRK00128, ipk, 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional	NA|278aa|down_1|NZ_CP020352.1_58521_59355_+	PRK09213, PRK09213, pur operon repressor; Provisional	NA|126aa|down_2|NZ_CP020352.1_59372_59750_+	TIGR00004, RutC_family_protein, reactive intermediate/imine deaminase	NA|98aa|down_3|NZ_CP020352.1_59930_60224_+	PRK13259, PRK13259, septation regulator SpoVG	NA|457aa|down_4|NZ_CP020352.1_60525_61896_+	PRK14354, glmU, bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA|317aa|down_5|NZ_CP020352.1_61916_62867_+	PRK01259, PRK01259, ribose-phosphate diphosphokinase	NA|209aa|down_6|NZ_CP020352.1_62947_63574_+	PRK05618, PRK05618, 50S ribosomal protein L25/general stress protein Ctc; Reviewed	NA|189aa|down_7|NZ_CP020352.1_63690_64257_+	PRK05426, PRK05426, peptidyl-tRNA hydrolase; Provisional	NA|77aa|down_8|NZ_CP020352.1_64313_64544_+	pfam10955, DUF2757, Protein of unknown function (DUF2757)	cas3|1178aa|down_9|NZ_CP020352.1_64608_68142_+	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription]
GCF_002068155.1_ASM206815v1	NZ_CP020352	Bacillus paralicheniformis strain MDJK30 chromosome, complete genome	2	877976-879602	1	CRT	no		cas3,csa3,WYL,DinG,DEDDh	Orphan	CNACNGGNNCNACNGGNNCAACNGG	25	5	26	878001-878020|878307-878326|878307-878326|878307-878326|878307-878326|878307-878326|878307-878326|878307-878326|878307-878326|878307-878326|878307-878326|878307-878326|878307-878326|878307-878326|878307-878326|878307-878326|878307-878326|878766-878794|878766-878794|878766-878794|878766-878794|878820-878848|878820-878848|878820-878848|878820-878848|879495-879523	NZ_CP020352.1_876736-876755|NZ_CP020352.1_873127-873146|NZ_CP020352.1_873649-873668|NZ_CP020352.1_874477-874496|NZ_CP020352.1_875188-875207|NZ_CP020352.1_875485-875504|NZ_CP020352.1_876016-876035|NZ_CP020352.1_876070-876089|NZ_CP020352.1_876124-876143|NZ_CP020352.1_872659-872678|NZ_CP020352.1_873541-873560|NZ_CP020352.1_873766-873785|NZ_CP020352.1_874072-874091|NZ_CP020352.1_874594-874613|NZ_CP020352.1_874792-874811|NZ_CP020352.1_875647-875666|NZ_CP020352.1_875728-875747|NZ_CP020352.1_873469-873497|NZ_CP020352.1_874000-874028|NZ_CP020352.1_874720-874748|NZ_CP020352.1_875305-875333|NZ_CP020352.1_873469-873497|NZ_CP020352.1_874000-874028|NZ_CP020352.1_874720-874748|NZ_CP020352.1_875305-875333|NZ_CP020352.1_879585-879613	NA	24	24	Orphan	cas3,csa3,WYL,DinG,DEDDh	NA,NA	NA|251aa|up_9|NZ_CP020352.1_859745_860498_-	PRK12896, PRK12896, methionine aminopeptidase; Reviewed	NA|654aa|up_8|NZ_CP020352.1_860623_862585_-	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane]	NA|126aa|up_7|NZ_CP020352.1_862847_863225_+	pfam09350, DUF1992, Domain of unknown function (DUF1992)	NA|471aa|up_6|NZ_CP020352.1_863295_864708_+	COG1115, AlsT, Na+/alanine symporter [Amino acid transport and metabolism]	NA|471aa|up_5|NZ_CP020352.1_864896_866309_+	TIGR01992, phosphotransferase_system_trehalose_permease, PTS system, trehalose-specific IIBC component	NA|563aa|up_4|NZ_CP020352.1_866382_868071_+	TIGR02403, Trehalose-6-phosphate_hydrolase, alpha,alpha-phosphotrehalase	NA|239aa|up_3|NZ_CP020352.1_868092_868809_+	TIGR02404, Trehalose_operon_transcriptional_repressor, trehalose operon repressor, B	NA|231aa|up_2|NZ_CP020352.1_868915_869608_+	cd03358, LbH_WxcM_N_like, WcxM-like, Left-handed parallel beta-Helix (LbH) N-terminal domain: This group is composed of Xanthomonas campestris WcxM and proteins with similarity to the WcxM N-terminal domain	NA|535aa|up_1|NZ_CP020352.1_869734_871339_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|1899aa|up_0|NZ_CP020352.1_871564_877261_+	PHA03247, PHA03247, large tegument protein UL36; Provisional	NA|364aa|down_0|NZ_CP020352.1_879802_880894_-	cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)	NA|181aa|down_1|NZ_CP020352.1_880890_881433_-	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates	NA|325aa|down_2|NZ_CP020352.1_881450_882425_-	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs	NA|458aa|down_3|NZ_CP020352.1_882491_883865_-	COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane]	NA|748aa|down_4|NZ_CP020352.1_884018_886262_-	cd06433, GT_2_WfgS_like, WfgS and WfeV are involved in O-antigen biosynthesis	NA|361aa|down_5|NZ_CP020352.1_886455_887538_+	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide	NA|370aa|down_6|NZ_CP020352.1_887659_888769_+	cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)	NA|355aa|down_7|NZ_CP020352.1_888765_889830_+	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|432aa|down_8|NZ_CP020352.1_889915_891211_+	TIGR03026, NDP-sugDHase, nucleotide sugar dehydrogenase	NA|304aa|down_9|NZ_CP020352.1_891291_892203_+	COG1073, COG1073, Hydrolases of the alpha/beta superfamily [General function prediction only]
GCF_002068155.1_ASM206815v1	NZ_CP020352	Bacillus paralicheniformis strain MDJK30 chromosome, complete genome	3	2245097-2245195	2	CRISPRCasFinder	no	WYL,csa3	cas3,csa3,WYL,DinG,DEDDh	Type I-A	TCAGGCAGCGATTCTTTTAGCGTT	24	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,WYL,DinG,DEDDh	NA|170aa|up_7|NZ_CP020352.1_2238417_2238927_+,NA|327aa|down_2|NZ_CP020352.1_2247636_2248617_-,NA|174aa|down_8|NZ_CP020352.1_2255158_2255680_-	NA|95aa|up_9|NZ_CP020352.1_2236964_2237249_-	pfam12674, Zn_ribbon_2, Putative zinc ribbon domain	WYL|312aa|up_8|NZ_CP020352.1_2237302_2238238_-	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|170aa|up_7|NZ_CP020352.1_2238417_2238927_+	NA	csa3|111aa|up_6|NZ_CP020352.1_2238967_2239300_-	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|275aa|up_5|NZ_CP020352.1_2239385_2240210_-	cd07727, YmaE-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis YmaE and related proteins; MBL-fold metallo hydrolase domain	NA|135aa|up_4|NZ_CP020352.1_2240350_2240755_-	pfam17452, YnfE, Uncharacterized protein YnfE	NA|446aa|up_3|NZ_CP020352.1_2240754_2242092_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|233aa|up_2|NZ_CP020352.1_2242134_2242833_+	cd16891, CwlT-like, CwlT-like N-terminal lysozyme domain and similar domains	NA|329aa|up_1|NZ_CP020352.1_2242966_2243953_-	pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein	NA|216aa|up_0|NZ_CP020352.1_2243991_2244639_-	pfam08795, DUF1796, Putative papain-like cysteine peptidase (DUF1796)	NA|406aa|down_0|NZ_CP020352.1_2245563_2246781_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|178aa|down_1|NZ_CP020352.1_2246950_2247484_-	COG2322, COG2322, Predicted membrane protein [Function unknown]	NA|327aa|down_2|NZ_CP020352.1_2247636_2248617_-	NA	NA|170aa|down_3|NZ_CP020352.1_2248846_2249356_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|322aa|down_4|NZ_CP020352.1_2249400_2250366_+	cd07062, Peptidase_S66_mccF_like, Microcin C7 self-immunity protein determines resistance to exogenous microcin C7	NA|530aa|down_5|NZ_CP020352.1_2250397_2251987_-	PRK10484, PRK10484, putative transporter; Provisional	NA|270aa|down_6|NZ_CP020352.1_2252147_2252957_-	COG3584, COG3584, Uncharacterized protein conserved in bacteria [Function unknown]	NA|594aa|down_7|NZ_CP020352.1_2253193_2254975_-	COG0514, RecQ, Superfamily II DNA helicase [DNA replication, recombination, and repair]	NA|174aa|down_8|NZ_CP020352.1_2255158_2255680_-	NA	NA|76aa|down_9|NZ_CP020352.1_2256084_2256312_+	pfam14070, YjfB_motility, Putative motility protein
GCF_002068155.1_ASM206815v1	NZ_CP020352	Bacillus paralicheniformis strain MDJK30 chromosome, complete genome	4	2391771-2391986	3	CRISPRCasFinder	no	DinG,cas3	cas3,csa3,WYL,DinG,DEDDh	Unclear	AAGCCTTGCAAGAAGGATTACGATTATTGCAAAAAGGATTATTACTACCATGAG	54	0	0	NA	NA	NA	1	1	Unclear	cas3,csa3,WYL,DinG,DEDDh	NA|121aa|up_0|NZ_CP020352.1_2390836_2391199_-,NA	NA|1188aa|up_9|NZ_CP020352.1_2378419_2381983_-	cd09912, DLP_2, Dynamin-like protein including dynamins, mitofusins, and guanylate-binding proteins	NA|32aa|up_8|NZ_CP020352.1_2382127_2382223_-	NF033217, Fur_reg_FbpC, Fur-regulated basic protein FbpC	NA|168aa|up_7|NZ_CP020352.1_2382286_2382790_-	COG1755, COG1755, Uncharacterized protein conserved in bacteria [Function unknown]	NA|366aa|up_6|NZ_CP020352.1_2382797_2383895_-	COG3424, BcsA, Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|184aa|up_5|NZ_CP020352.1_2383936_2384488_-	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|439aa|up_4|NZ_CP020352.1_2384561_2385878_-	TIGR03173, pbuX, xanthine permease	NA|195aa|up_3|NZ_CP020352.1_2385874_2386459_-	PRK09219, PRK09219, xanthine phosphoribosyltransferase; Validated	NA|502aa|up_2|NZ_CP020352.1_2386816_2388322_-	cd06460, M32_Taq, Peptidase family M32, which includes thermostable carboxypeptidases TaqCP, PfuCP and FisCP	DinG|640aa|up_1|NZ_CP020352.1_2388434_2390354_-	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair]	NA|121aa|up_0|NZ_CP020352.1_2390836_2391199_-	NA	NA|384aa|down_0|NZ_CP020352.1_2392312_2393464_-	COG0116, COG0116, Predicted N6-adenine-specific DNA methylase [DNA replication, recombination, and repair]	NA|99aa|down_1|NZ_CP020352.1_2393998_2394295_-	PRK14127, PRK14127, cell division regulator GpsB	NA|184aa|down_2|NZ_CP020352.1_2394375_2394927_-	PRK13660, PRK13660, hypothetical protein; Provisional	NA|90aa|down_3|NZ_CP020352.1_2395043_2395313_-	pfam11122, Spore-coat_CotD, Inner spore coat protein D	NA|438aa|down_4|NZ_CP020352.1_2395554_2396868_-	COG3359, COG3359, Predicted exonuclease [DNA replication, recombination, and repair]	cas3|760aa|down_5|NZ_CP020352.1_2396873_2399153_-	COG1205, COG1205, Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster [General function prediction only]	NA|169aa|down_6|NZ_CP020352.1_2399256_2399763_-	pfam00358, PTS_EIIA_1, phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1	NA|140aa|down_7|NZ_CP020352.1_2399938_2400358_+	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]	NA|148aa|down_8|NZ_CP020352.1_2400376_2400820_-	pfam14179, YppG, YppG-like protein	NA|67aa|down_9|NZ_CP020352.1_2400998_2401199_+	pfam14178, YppF, YppF-like protein
