The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP015902	Lactococcus lactis subsp. lactis strain UC06 chromosome, complete genome	2571427	136636	163981	2571427	transposase,integrase	Clostridium_phage(25.0%)	31	145042:145101	162889:163022
WP_081213290.1|136636_137527_-|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_021037031.1|137680_139261_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011835457.1|139241_140006_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.4	4.5e-27
WP_021216425.1|140128_141028_-	EamA family transporter	NA	NA	NA	NA	NA
WP_023349191.1|141177_142068_+|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_021214757.1|142072_142402_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010890681.1|142427_142808_-	single-stranded DNA-binding protein	NA	NA	NA	NA	NA
WP_042748662.1|142821_143187_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010890679.1|143281_143548_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010890656.1|143561_144359_-	hypothetical protein	NA	E2ELL2	Clostridium_phage	38.3	1.8e-18
WP_081213291.1|144462_145020_-	recombinase family protein	NA	A0A0A8WIK3	Clostridium_phage	43.1	1.3e-31
145042:145101	attL	AGCCTTTTATAATTCAAAACGAATCCATCAAAGTTTAGGGTATCTTACACCTAATCAATT	NA	NA	NA	NA
WP_081213292.1|145567_147034_-	DNA polymerase	NA	Q6DMX4	Streptococcus_phage	51.5	2.6e-124
WP_081213293.1|147673_148006_+	type I restriction endonuclease subunit R	NA	NA	NA	NA	NA
WP_081144388.1|148037_148241_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052133406.1|149313_149856_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081213294.1|150035_150716_-|transposase	IS6-like element ISS1N family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	83.2	1.6e-108
WP_003132322.1|151693_151894_+	hypothetical protein	NA	Q9AZK6	Lactococcus_phage	51.9	2.2e-05
WP_003132324.1|152024_152225_+	cold shock domain-containing protein	NA	NA	NA	NA	NA
WP_012898583.1|152502_152703_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	92.4	6.9e-28
WP_003131011.1|153217_153457_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_003131013.1|153486_154047_+	alkaline shock response membrane anchor protein AmaP	NA	NA	NA	NA	NA
WP_011835142.1|154056_154245_+	DUF2273 domain-containing protein	NA	NA	NA	NA	NA
WP_014017382.1|154265_154817_+	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA	NA
WP_081213295.1|155302_155983_-	DDE domain-containing protein	NA	A0A1X9I6C6	Streptococcus_phage	82.7	6.1e-108
WP_021109227.1|156182_157049_+	KR domain-containing protein	NA	F2NZ40	Diadromus_pulchellus_ascovirus	46.9	1.2e-60
WP_081213296.1|158633_159176_-|integrase	site-specific integrase	integrase	E2ELN7	Clostridium_phage	35.3	1.4e-17
WP_003107891.1|159204_159501_-	DUF4298 domain-containing protein	NA	NA	NA	NA	NA
WP_081213297.1|159591_160482_-|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_080749492.1|160644_160791_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081213786.1|162869_163709_-	DDE domain-containing protein	NA	A0A1P8CWQ3	Bacillus_phage	41.4	5.5e-50
162889:163022	attR	AATTGATTAGGTGTAAGATACCCTAAACTTTGATGGATTCGTTTTGAATTATAAAAGGCTTCGATGTACCAGAAAATACTCTGATAGGCTTCTTCAAAGTTCTTATATTTAAATTGATACACGCACTCTCTTTT	NA	NA	NA	NA
WP_003137511.1|163720_163981_-|transposase	IS3 family transposase	transposase	A0A1P8CWP5	Bacillus_phage	37.6	8.4e-10
>prophage 2
NZ_CP015902	Lactococcus lactis subsp. lactis strain UC06 chromosome, complete genome	2571427	498308	510436	2571427		uncultured_virus(30.0%)	14	NA	NA
WP_003131595.1|498308_498626_+	thioredoxin	NA	A0A0K2FIM3	Achromobacter_phage	30.4	4.5e-05
WP_003131594.1|498711_499338_+	DUF4479 domain-containing protein	NA	NA	NA	NA	NA
WP_023188995.1|499500_500841_+	NADH oxidase	NA	NA	NA	NA	NA
WP_058221224.1|500929_501319_+	single-stranded DNA-binding protein	NA	A0A218MNB4	uncultured_virus	47.9	1.1e-24
WP_003131589.1|501438_501723_+	co-chaperone GroES	NA	A0A221S386	uncultured_virus	44.1	3.1e-13
WP_003131585.1|501811_503440_+	molecular chaperone GroEL	NA	A0A219YK78	uncultured_virus	56.8	4.9e-156
WP_003131583.1|503485_504298_-	MBL fold metallo-hydrolase	NA	A0A0C5AJ83	Bacteriophage	38.1	3.1e-34
WP_012897229.1|504466_505909_-	cell wall metabolism sensor histidine kinase WalK	NA	W8CYF6	Bacillus_phage	33.0	1.4e-32
WP_003131580.1|505901_506603_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	39.7	1.2e-42
WP_012897230.1|506780_507416_+	thymidylate kinase	NA	M1PSC7	Streptococcus_phage	65.0	5.4e-74
WP_003131573.1|507547_508408_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	45.2	5.0e-67
WP_023188991.1|508459_509242_+	Signal peptidase-like protein	NA	NA	NA	NA	NA
WP_011675472.1|509234_509561_+	DNA replication initiation control protein YabA	NA	NA	NA	NA	NA
WP_003131568.1|509560_510436_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	65.4	8.7e-99
>prophage 3
NZ_CP015902	Lactococcus lactis subsp. lactis strain UC06 chromosome, complete genome	2571427	947873	998858	2571427	protease,transposase,holin,portal,tail,terminase,capsid,integrase	Lactococcus_phage(50.0%)	56	979556:979572	995141:995157
WP_081213439.1|947873_949004_-|integrase	site-specific integrase	integrase	A0A1B1IMP1	Lactococcus_phage	33.8	1.8e-43
WP_081213440.1|949144_950029_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081213441.1|950086_950674_-	hypothetical protein	NA	Q9AZW4	Lactococcus_phage	76.2	1.5e-83
WP_081213442.1|950684_951224_-	XRE family transcriptional regulator	NA	A0A1B1IMP5	Lactococcus_phage	68.6	8.6e-49
WP_081213443.1|951452_951671_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081213798.1|951630_952260_-	DUF4145 domain-containing protein	NA	Q7Y4L7	Streptococcus_phage	53.9	4.2e-55
WP_081213444.1|952357_952693_+	XRE family transcriptional regulator	NA	A0A1B1IMQ9	Lactococcus_phage	97.4	1.0e-36
WP_081213445.1|952709_953432_+	hypothetical protein	NA	O48505	Lactococcus_phage	54.5	1.3e-68
WP_058218046.1|953571_953823_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081213446.1|954071_954281_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081213447.1|954306_954495_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081213448.1|954504_954939_+	single-stranded DNA-binding protein	NA	Q9AYU6	Lactococcus_phage	70.9	1.8e-49
WP_081213449.1|954949_955798_+	DnaD domain protein	NA	A0A1L2BY83	Clostridium_phage	44.3	8.3e-14
WP_081213450.1|955801_956197_+	hypothetical protein	NA	NA	NA	NA	NA
WP_058208322.1|956193_956412_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081213451.1|956408_956918_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081213452.1|957074_957371_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081213453.1|957363_957924_+	DUF1642 domain-containing protein	NA	Q77MW7	Lactococcus_phage	56.3	6.0e-45
WP_081213454.1|957920_958265_+	hypothetical protein	NA	Q9AZU2	Lactococcus_phage	93.0	1.2e-56
WP_081213455.1|958257_958656_+	hypothetical protein	NA	Q9AZ74	Lactococcus_phage	32.7	9.6e-05
WP_081213456.1|959003_959165_+	hypothetical protein	NA	A0A1P8BKU8	Lactococcus_phage	83.0	5.0e-21
WP_081213457.1|960218_960491_+	hypothetical protein	NA	Q8LTL7	Lactococcus_phage	92.2	1.0e-42
WP_039115547.1|960741_961041_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081213458.1|961089_961389_+	alpha/beta hydrolase	NA	A0A1S5SFB3	Streptococcus_phage	60.5	9.1e-24
WP_081213459.1|962120_963860_+|terminase	terminase large subunit	terminase	A3F641	Streptococcus_phage	62.3	9.5e-214
WP_081213460.1|964599_965904_+|portal	phage portal protein	portal	A0A2P0ZLC9	Lactobacillus_phage	30.6	1.6e-40
WP_080756630.1|965866_966709_+|protease	Clp protease ClpP	protease	A3F644	Streptococcus_phage	41.4	5.5e-34
WP_058208909.1|966708_967854_+|capsid	phage major capsid protein	capsid	A3F645	Streptococcus_phage	46.7	2.4e-80
WP_081213461.1|968032_968338_+	hypothetical protein	NA	A3F647	Streptococcus_phage	43.0	1.1e-11
WP_039115531.1|968334_968721_+	hypothetical protein	NA	A0A1S5SFE6	Streptococcus_phage	42.7	4.8e-17
WP_081213462.1|968713_969118_+	hypothetical protein	NA	A0A2P0ZLD7	Lactobacillus_phage	41.3	4.4e-13
WP_029344159.1|969114_969504_+	hypothetical protein	NA	NA	NA	NA	NA
WP_029344158.1|969518_970097_+	hypothetical protein	NA	A3F651	Streptococcus_phage	42.9	4.8e-29
WP_029344157.1|970153_970459_+	hypothetical protein	NA	NA	NA	NA	NA
WP_029344156.1|970734_971298_+	DUF4177 domain-containing protein	NA	NA	NA	NA	NA
WP_081213463.1|971375_973859_+|tail	phage tail tape measure protein	tail	A0A1S5SFC1	Streptococcus_phage	38.4	4.2e-90
WP_081213464.1|973822_975463_+	hypothetical protein	NA	A3F654	Streptococcus_phage	41.1	5.7e-27
WP_081213799.1|975471_976986_+|tail	phage tail protein	tail	Q9AZL3	Lactococcus_phage	35.7	1.4e-75
WP_081213465.1|976985_980138_+	hypothetical protein	NA	A0A1P8BKD5	Lactococcus_phage	44.9	8.8e-210
979556:979572	attL	AGATGGAGTTATTGAAA	NA	NA	NA	NA
WP_025017282.1|980148_980385_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023189750.1|980397_980622_+|holin	phage holin	holin	A0A1B1IMU8	Lactococcus_phage	98.6	1.4e-32
WP_023164507.1|980634_980922_+|holin	phage holin	holin	Q9AZL0	Lactococcus_phage	98.9	1.6e-46
WP_081213466.1|980921_981701_+|holin	phage holin	holin	Q9AZW7	Lactococcus_phage	98.1	1.5e-126
WP_081213800.1|981805_982000_-	hypothetical protein	NA	A5GYL5	Lactococcus_phage	88.6	3.2e-14
WP_081213467.1|983378_984560_+	serine/threonine protein kinase	NA	A0A0G2YBE6	Acanthamoeba_polyphaga_mimivirus	27.3	6.0e-10
WP_032941908.1|985084_985582_+	hypothetical protein	NA	NA	NA	NA	NA
WP_029343694.1|985574_986903_+	glycosyl transferase	NA	NA	NA	NA	NA
WP_010905603.1|987128_987665_+	HdeD family acid-resistance protein	NA	NA	NA	NA	NA
WP_021722038.1|987863_988595_+	nicotinamide riboside transporter PnuC	NA	A0A1S5RCS1	Lactobacillus_phage	29.9	2.6e-16
WP_003131384.1|989123_989549_+	universal stress protein	NA	NA	NA	NA	NA
WP_081213468.1|989691_990018_+	HU family DNA-binding protein	NA	NA	NA	NA	NA
WP_003131387.1|990087_990621_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_039115065.1|990786_993186_+	YhgE/Pip domain-containing protein	NA	NA	NA	NA	NA
WP_003131392.1|993371_993704_+	metal-sulfur cluster assembly factor	NA	NA	NA	NA	NA
WP_039115070.1|993839_994814_+|integrase	integrase	integrase	A0A142F1N9	Bacillus_phage	28.6	6.6e-31
WP_003137511.1|998597_998858_-|transposase	IS3 family transposase	transposase	A0A1P8CWP5	Bacillus_phage	37.6	8.4e-10
995141:995157	attR	AGATGGAGTTATTGAAA	NA	NA	NA	NA
>prophage 4
NZ_CP015902	Lactococcus lactis subsp. lactis strain UC06 chromosome, complete genome	2571427	1004299	1018666	2571427		Lactococcus_phage(82.35%)	17	NA	NA
WP_039115080.1|1004299_1005928_+	hypothetical protein	NA	A0A2K8I8E7	Lactococcus_phage	59.3	7.3e-184
WP_039115081.1|1005940_1006225_+	HNH endonuclease	NA	A0A023J2U4	Lactococcus_phage	63.2	3.7e-27
WP_081213469.1|1007430_1007946_+	hypothetical protein	NA	A0A126HA84	Lactococcus_phage	46.8	1.5e-37
WP_039115088.1|1007938_1009087_+	hypothetical protein	NA	A0A126HA32	Lactococcus_phage	48.7	4.1e-88
WP_039115090.1|1009205_1009481_+	hypothetical protein	NA	A0A126HAQ3	Lactococcus_phage	38.8	2.5e-12
WP_081213470.1|1009477_1009792_+	hypothetical protein	NA	H9ED09	Lactococcus_virus	64.4	3.1e-30
WP_039115096.1|1009805_1010144_+	hypothetical protein	NA	R9R0Z2	Lactococcus_phage	50.9	5.4e-25
WP_039115098.1|1010136_1010502_+	hypothetical protein	NA	A0A1W6JH10	Lactococcus_phage	49.6	5.5e-23
WP_052230904.1|1010517_1011192_+	hypothetical protein	NA	A0A126HD64	Lactococcus_phage	51.2	5.9e-55
WP_039115102.1|1011227_1011506_+	hypothetical protein	NA	A0A2K8IJZ2	Lactococcus_phage	51.2	4.2e-15
WP_039115103.1|1011577_1012063_+	hypothetical protein	NA	B3TJP9	Lactococcus_virus	32.5	1.7e-11
WP_039115104.1|1012066_1014547_+	tape measure domain-containing protein	NA	A0A023J3B5	Lactococcus_phage	54.9	1.1e-98
WP_039115105.1|1014550_1015909_+	hypothetical protein	NA	C7T1V3	Lactococcus_virus	51.2	2.0e-134
WP_081213471.1|1015908_1016508_+	hypothetical protein	NA	A0A126H9C5	Lactococcus_phage	54.1	9.3e-36
WP_081213472.1|1016480_1017032_+	hypothetical protein	NA	A0A2H4ESG5	Lactococcus_phage	45.2	6.4e-31
WP_052230906.1|1017424_1018312_+	hypothetical protein	NA	Q1RNC9	Lactococcus_phage	42.9	3.9e-46
WP_039115108.1|1018342_1018666_+	hypothetical protein	NA	A0A1X9IGI3	Lactococcus_phage	49.5	1.9e-19
>prophage 5
NZ_CP015902	Lactococcus lactis subsp. lactis strain UC06 chromosome, complete genome	2571427	1092331	1115781	2571427		Staphylococcus_phage(21.43%)	22	NA	NA
WP_003130964.1|1092331_1093024_+	cell division ATP-binding protein FtsE	NA	G9BWD6	Planktothrix_phage	34.4	2.7e-31
WP_012897609.1|1093016_1093952_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_012897610.1|1094053_1095031_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A096XT60	Enterococcus_phage	66.0	1.9e-118
WP_017864416.1|1095379_1097548_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	61.1	2.3e-257
WP_003130968.1|1097683_1098106_-	protein NrdI	NA	A0A142F1R4	Bacillus_phage	37.3	2.3e-12
WP_012897612.1|1098107_1098326_-	NrdH-redoxin	NA	C3U2K9	Lactococcus_phage	47.6	7.6e-12
WP_012897613.1|1098499_1099138_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_012897614.1|1099412_1101347_+	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	43.5	1.1e-125
WP_003130975.1|1101551_1102091_+	cysteine hydrolase	NA	NA	NA	NA	NA
WP_081213483.1|1102083_1102917_+	3'-5' exonuclease	NA	A0A0K2SUJ2	Clostridium_phage	39.4	5.3e-21
WP_003130977.1|1102913_1103363_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003130980.1|1103637_1106112_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	32.2	4.2e-98
WP_003130981.1|1106137_1107043_-	magnesium transporter CorA family protein	NA	NA	NA	NA	NA
WP_012897616.1|1107511_1108600_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	38.8	1.9e-50
WP_012897617.1|1108599_1109250_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	43.1	9.4e-42
WP_081213484.1|1109258_1110455_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	51.5	1.4e-112
WP_003130993.1|1110482_1110947_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	53.7	1.8e-39
WP_012897620.1|1111049_1111502_+	signal peptidase II	NA	NA	NA	NA	NA
WP_003130995.1|1111562_1112468_+	RluA family pseudouridine synthase	NA	A0A2H4UV25	Bodo_saltans_virus	28.2	5.4e-11
WP_012897621.1|1112616_1113060_+	acid phosphatase	NA	NA	NA	NA	NA
WP_012897622.1|1113199_1114822_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012897623.1|1114824_1115781_+	glycosyltransferase	NA	I1TED8	Salmonella_phage	37.5	4.0e-49
>prophage 6
NZ_CP015902	Lactococcus lactis subsp. lactis strain UC06 chromosome, complete genome	2571427	1320667	1326444	2571427		Lactobacillus_phage(50.0%)	7	NA	NA
WP_081213518.1|1320667_1321879_-	NADPH-dependent FMN reductase	NA	A0A2P0ZL82	Lactobacillus_phage	57.4	3.5e-58
WP_011915229.1|1321932_1322538_-	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	52.7	8.8e-50
WP_023189236.1|1322553_1323477_-	FAD:protein FMN transferase	NA	NA	NA	NA	NA
WP_023189235.1|1323656_1324709_-	BMP family ABC transporter substrate-binding protein	NA	A0A0A7DN02	Lactobacillus_phage	39.1	5.2e-58
WP_058223180.1|1324773_1325253_-	nucleoside 2-deoxyribosyltransferase	NA	A0A1D3SPR3	Enterococcus_phage	47.4	4.5e-33
WP_058220898.1|1325236_1325791_-	TIGR00730 family Rossman fold protein	NA	A0A1D3SNB7	Enterococcus_phage	41.9	1.5e-27
WP_023189232.1|1325793_1326444_-	deoxynucleoside kinase	NA	C1KFI3	Lactobacillus_virus	49.5	2.2e-54
>prophage 7
NZ_CP015902	Lactococcus lactis subsp. lactis strain UC06 chromosome, complete genome	2571427	1389327	1401073	2571427	integrase	Streptococcus_phage(25.0%)	9	1385005:1385020	1390946:1390961
1385005:1385020	attL	GAATCTTCTTTTAATT	NA	NA	NA	NA
WP_081213525.1|1389327_1390590_-|integrase	site-specific integrase	integrase	A0A1S5S9U4	Streptococcus_phage	29.7	3.5e-32
WP_025016762.1|1390667_1390916_-	hypothetical protein	NA	A0A1X9IGE0	Lactococcus_phage	50.7	2.9e-15
WP_025016763.1|1390955_1391249_-	hypothetical protein	NA	NA	NA	NA	NA
1390946:1390961	attR	GAATCTTCTTTTAATT	NA	NA	NA	NA
WP_081213526.1|1391633_1393418_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A1X9I6C7	Streptococcus_phage	31.4	1.1e-76
WP_081213527.1|1393445_1394504_-	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	43.7	1.1e-74
WP_025016766.1|1396380_1397157_-	XRE family transcriptional regulator	NA	A0A1B0Y2R0	Lactobacillus_phage	39.5	8.2e-08
WP_044009673.1|1397467_1398634_-	nucleotide sugar dehydrogenase	NA	A0A1J0FA55	Only_Syngen_Nebraska_virus	42.2	9.2e-80
WP_032943383.1|1398633_1399413_-	site-specific DNA-methyltransferase	NA	K9MDN9	Sulfolobus_virus	28.0	9.3e-12
WP_081213528.1|1399483_1401073_-	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	30.3	2.6e-53
>prophage 8
NZ_CP015902	Lactococcus lactis subsp. lactis strain UC06 chromosome, complete genome	2571427	1720791	1791739	2571427	head,tRNA,protease,portal,holin,tail,terminase,capsid,integrase	Lactococcus_phage(82.14%)	84	1749285:1749305	1788205:1788225
WP_058221313.1|1720791_1721829_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_003130721.1|1721904_1722216_-	XRE family transcriptional regulator	NA	A0A1S5SAD3	Streptococcus_phage	40.8	3.3e-08
WP_023188713.1|1722294_1723467_-	DUF916 and DUF3324 domain-containing protein	NA	NA	NA	NA	NA
WP_081213591.1|1723589_1728446_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023188710.1|1728482_1729238_-	WxL domain-containing protein	NA	NA	NA	NA	NA
WP_081213592.1|1729275_1730034_-	WxL domain-containing protein	NA	NA	NA	NA	NA
WP_080513158.1|1730071_1730800_-	WxL domain-containing protein	NA	NA	NA	NA	NA
WP_058221316.1|1730891_1731737_-	WxL domain-containing protein	NA	NA	NA	NA	NA
WP_017864793.1|1731797_1732103_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039115689.1|1732690_1733308_+	hypothetical protein	NA	NA	NA	NA	NA
WP_017864795.1|1733342_1733513_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010906045.1|1733540_1734848_-	GTPase ObgE	NA	NA	NA	NA	NA
WP_021722683.1|1735003_1736182_-	cell division protein DivIB	NA	NA	NA	NA	NA
WP_003130746.1|1736182_1737256_-	undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase	NA	NA	NA	NA	NA
WP_003130748.1|1737465_1738818_-	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA	NA	NA	NA	NA
WP_010906046.1|1739309_1739651_-	nitrogen regulatory protein P-II	NA	NA	NA	NA	NA
WP_039115695.1|1739782_1741024_-	ammonium transporter	NA	NA	NA	NA	NA
WP_010906048.1|1741206_1742682_-	sensor histidine kinase	NA	W8CYF6	Bacillus_phage	33.1	1.5e-26
WP_012898209.1|1742690_1743383_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	34.1	5.3e-35
WP_081213593.1|1743538_1744069_-	DUF177 domain-containing protein	NA	NA	NA	NA	NA
WP_003130760.1|1744199_1744445_-	50S ribosomal protein L31 type B	NA	NA	NA	NA	NA
WP_080668870.1|1744600_1745032_-	hypothetical protein	NA	A0A1P8BMT7	Lactococcus_phage	34.3	1.7e-10
WP_023188700.1|1745146_1745509_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023188699.1|1745734_1746646_-	CHAP domain-containing protein	NA	W5R8Q8	Staphylococcus_phage	38.5	4.0e-06
WP_025017008.1|1746758_1747595_-	metallophosphoesterase	NA	NA	NA	NA	NA
WP_081213594.1|1748281_1749190_+	hypothetical protein	NA	NA	NA	NA	NA
1749285:1749305	attL	AAGTTATCCATGAGATCCATG	NA	NA	NA	NA
WP_081213595.1|1749478_1749691_-	hypothetical protein	NA	A0A182BQ74	Lactococcus_phage	38.2	7.9e-06
WP_081213596.1|1750600_1751380_-|holin	phage holin	holin	Q9AZW7	Lactococcus_phage	96.5	1.8e-124
WP_081213597.1|1751379_1751679_-|holin	phage holin	holin	Q9AZR2	Lactococcus_phage	99.0	2.9e-46
WP_081213598.1|1751691_1752042_-	hypothetical protein	NA	A0A1P8BKU2	Lactococcus_phage	91.4	1.1e-49
WP_081213599.1|1752068_1752893_-	hypothetical protein	NA	A0A059NTA1	Lactococcus_phage	70.1	1.5e-20
WP_081213600.1|1753026_1755456_-	hypothetical protein	NA	A0A059NT86	Lactococcus_phage	71.8	5.4e-311
WP_081213601.1|1755467_1755833_-	hypothetical protein	NA	A0A059NT91	Lactococcus_phage	98.3	7.1e-63
WP_081213602.1|1755845_1760627_-|tail	phage tail protein	tail	A0A059NT57	Lactococcus_phage	83.6	0.0e+00
WP_014734984.1|1760657_1761029_-	hypothetical protein	NA	A0A059NT78	Lactococcus_phage	100.0	1.1e-47
WP_011676909.1|1761052_1761463_-	hypothetical protein	NA	A0A059NTA0	Lactococcus_phage	99.3	2.8e-68
WP_021722205.1|1761536_1761962_-|tail	major tail protein	tail	A0A182BQ87	Lactococcus_phage	92.1	2.5e-67
WP_021722206.1|1761974_1762337_-	hypothetical protein	NA	A0A182BQ88	Lactococcus_phage	99.2	1.1e-60
WP_032946647.1|1762336_1762885_-	hypothetical protein	NA	A0A059NT55	Lactococcus_phage	99.5	1.0e-97
WP_081213603.1|1762868_1763222_-	hypothetical protein	NA	A0A059NT74	Lactococcus_phage	94.9	1.9e-57
WP_081213604.1|1763202_1763535_-	hypothetical protein	NA	A0A059NT99	Lactococcus_phage	95.5	3.2e-54
WP_081213605.1|1763554_1764673_-|capsid	N4-gp56 family major capsid protein	capsid	A0A182BQ73	Lactococcus_phage	84.3	1.1e-149
WP_081213803.1|1764684_1765341_-	DUF4355 domain-containing protein	NA	A0A182BQ92	Lactococcus_phage	89.9	9.7e-79
WP_081213606.1|1765687_1766824_-|head	phage head morphogenesis protein	head	A0A059NT80	Lactococcus_phage	98.4	3.0e-200
WP_081213607.1|1766833_1767208_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081213608.1|1767209_1767497_-|protease	ribosomal-processing cysteine protease Prp	protease	A0A059NT85	Lactococcus_phage	94.7	2.4e-45
WP_081213609.1|1767719_1769123_-|portal	phage portal protein	portal	A0A182BQ97	Lactococcus_phage	98.5	3.5e-251
WP_081213610.1|1769131_1770367_-|terminase	PBSX family phage terminase large subunit	terminase	A0A182BQ98	Lactococcus_phage	95.6	1.2e-234
WP_081213611.1|1770356_1770869_-|terminase	terminase small subunit	terminase	A0A182BQ99	Lactococcus_phage	95.9	1.4e-80
WP_081213612.1|1771318_1771744_-	DUF722 domain-containing protein	NA	A0A059NT50	Lactococcus_phage	98.6	1.5e-75
WP_032398678.1|1772077_1772299_-	hypothetical protein	NA	A0A1P8BL06	Lactococcus_phage	100.0	6.4e-35
WP_032398551.1|1772307_1772538_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081213613.1|1772534_1772705_-	hypothetical protein	NA	A0A1B1IMR7	Lactococcus_phage	48.4	5.7e-07
WP_081213614.1|1772680_1772905_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081213615.1|1772901_1773177_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081213804.1|1773173_1773446_-	hypothetical protein	NA	Q9AZP0	Lactococcus_phage	94.1	2.9e-29
WP_081213805.1|1773726_1773963_-	hypothetical protein	NA	Q9AZU2	Lactococcus_phage	86.9	4.8e-20
WP_075070383.1|1774076_1774508_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081213616.1|1774510_1774930_-	aminotransferase	NA	A5GYP0	Lactococcus_phage	94.9	1.3e-68
WP_081213617.1|1774926_1775196_-	hypothetical protein	NA	A0A1W6JJZ9	Lactococcus_phage	52.9	6.5e-21
WP_081213618.1|1775192_1775699_-	DUF1642 domain-containing protein	NA	A0A1P8BLY6	Lactococcus_phage	47.7	6.9e-32
WP_081213619.1|1775691_1776003_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081213620.1|1775983_1776133_-	hypothetical protein	NA	Q9AZP4	Lactococcus_phage	94.9	5.5e-14
WP_081213621.1|1776240_1776717_-	hypothetical protein	NA	A5GZ50	Lactococcus_phage	99.3	4.3e-76
WP_023164530.1|1776640_1776805_-	hypothetical protein	NA	A0A1P8BKY2	Lactococcus_phage	98.1	5.5e-23
WP_081213622.1|1776814_1777705_-	prepilin peptidase	NA	Q38098	Lactococcus_phage	99.7	4.6e-164
WP_081213623.1|1777714_1778521_-	replication protein	NA	A0A1P8BL25	Lactococcus_phage	99.1	4.4e-57
WP_031560862.1|1778645_1779071_-	single-stranded DNA-binding protein	NA	Q9AZV6	Lactococcus_phage	99.3	1.6e-74
WP_081213624.1|1779063_1779822_-	hypothetical protein	NA	Q0ILF6	Lactococcus_phage	96.0	1.1e-142
WP_081213625.1|1779830_1780349_-	hypothetical protein	NA	Q9XJE3	Lactococcus_phage	98.3	9.1e-88
WP_010905687.1|1780464_1780680_-	hypothetical protein	NA	Q38272	Lactococcus_phage	100.0	2.4e-34
WP_081213626.1|1780679_1780880_-	XRE family transcriptional regulator	NA	A0A1X9I6I3	Streptococcus_phage	43.5	1.1e-06
WP_003130869.1|1781485_1781824_-	hypothetical protein	NA	A0A1B1IMQ1	Lactococcus_phage	99.1	9.8e-59
WP_081213627.1|1781837_1782629_-	phage antirepressor	NA	Q38330	Lactococcus_phage	79.0	9.9e-110
WP_021214421.1|1782641_1782890_-	XRE family transcriptional regulator	NA	J7KK54	Streptococcus_phage	51.7	2.9e-07
WP_081213628.1|1783077_1783749_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081213629.1|1784032_1784521_+	helix-turn-helix domain-containing protein	NA	Q9AZW3	Lactococcus_phage	76.4	3.4e-36
WP_081213630.1|1784530_1785118_+	hypothetical protein	NA	Q9AZW4	Lactococcus_phage	98.5	4.9e-106
WP_081213631.1|1785182_1785938_+	DUF4352 domain-containing protein	NA	A0A0P0IXE0	Lactobacillus_phage	46.2	1.8e-23
WP_081213632.1|1786039_1786816_+	glycoside hydrolase, family 25	NA	A0A1P8BMN5	Lactococcus_phage	98.1	4.2e-97
WP_081213633.1|1786950_1788090_+|integrase	site-specific integrase	integrase	A0A1B1IMP1	Lactococcus_phage	97.6	1.4e-210
WP_015426754.1|1788194_1789268_-	carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.3	2.0e-60
1788205:1788225	attR	AAGTTATCCATGAGATCCATG	NA	NA	NA	NA
WP_017864817.1|1789330_1790263_-	aspartate carbamoyltransferase catalytic subunit	NA	M1HWF9	Paramecium_bursaria_Chlorella_virus	30.8	9.8e-24
WP_010906053.1|1790446_1791739_-	uracil permease	NA	Q9KX94	Enterobacteria_phage	35.9	1.6e-61
>prophage 9
NZ_CP015902	Lactococcus lactis subsp. lactis strain UC06 chromosome, complete genome	2571427	1924762	1934623	2571427	tRNA	Prochlorococcus_phage(33.33%)	9	NA	NA
WP_003130886.1|1924762_1925524_-	phosphate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.0	1.5e-17
WP_003130885.1|1925689_1926499_-	phosphate ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.5	7.0e-10
WP_003130884.1|1926532_1927426_-	phosphate ABC transporter, permease protein PstA	NA	NA	NA	NA	NA
WP_021722156.1|1927425_1928349_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_017864882.1|1928469_1929321_-	phosphate ABC transporter substrate-binding protein	NA	E3SNT9	Prochlorococcus_phage	27.3	4.2e-05
WP_003130880.1|1929666_1930563_-	phosphate ABC transporter substrate-binding protein	NA	E3SM63	Prochlorococcus_phage	32.4	7.2e-08
WP_003130878.1|1930840_1931308_-	SsrA-binding protein	NA	W5RAM5	Staphylococcus_phage	56.6	2.7e-43
WP_081040700.1|1931339_1931918_-	esterase	NA	NA	NA	NA	NA
WP_058221023.1|1932004_1934623_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	33.3	1.9e-64
>prophage 10
NZ_CP015902	Lactococcus lactis subsp. lactis strain UC06 chromosome, complete genome	2571427	1951106	1966041	2571427	integrase	Lactococcus_phage(86.67%)	21	1956239:1956254	1966429:1966444
WP_081213652.1|1951106_1951595_-	DUF4065 domain-containing protein	NA	A0A0N9SGM1	Paenibacillus_phage	40.5	3.7e-14
WP_081213653.1|1951793_1952087_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081213654.1|1952079_1952355_-	DUF2089 domain-containing protein	NA	NA	NA	NA	NA
WP_010906208.1|1952499_1953006_-	GNAT family N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	100.0	4.2e-90
WP_081213807.1|1953155_1953293_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003132811.1|1953505_1953868_-	hypothetical protein	NA	Q9AZG6	Lactococcus_phage	99.2	1.7e-56
WP_081213655.1|1953885_1954458_-	hypothetical protein	NA	Q9AZG7	Lactococcus_phage	96.8	1.4e-94
WP_032398903.1|1954619_1954826_-	hypothetical protein	NA	Q9AZG9	Lactococcus_phage	97.1	1.4e-31
WP_003132807.1|1954844_1955027_-	hypothetical protein	NA	Q9AZH0	Lactococcus_phage	98.3	5.3e-27
WP_080554626.1|1955396_1955711_-	hypothetical protein	NA	Q9AZH1	Lactococcus_phage	94.2	4.1e-51
1956239:1956254	attL	CAGATTTACTGACAAA	NA	NA	NA	NA
WP_081213656.1|1957103_1957373_-	hypothetical protein	NA	Q9AZH3	Lactococcus_phage	93.3	3.4e-38
WP_023163719.1|1957369_1957522_-	hypothetical protein	NA	Q9AZH4	Lactococcus_phage	86.0	1.7e-15
WP_010906219.1|1957774_1957945_-	hypothetical protein	NA	Q9AZH6	Lactococcus_phage	100.0	4.6e-25
WP_081213657.1|1958016_1958706_-	hypothetical protein	NA	R9QNB1	Lactococcus_phage	96.8	9.8e-114
WP_010906222.1|1958820_1959027_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_047686619.1|1959175_1959883_+	XRE family transcriptional regulator	NA	Q9AZH9	Lactococcus_phage	92.3	9.1e-115
WP_081213658.1|1959963_1961169_+|integrase	site-specific integrase	integrase	Q9AZI0	Lactococcus_phage	54.1	5.7e-117
WP_081213659.1|1961295_1962210_-	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	25.8	5.4e-11
WP_003132795.1|1962365_1962878_-	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010906113.1|1963210_1963444_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_058220830.1|1963536_1966041_-	ATP-dependent RecD-like DNA helicase	NA	A0A1W6JK95	Lactococcus_phage	25.6	1.3e-43
1966429:1966444	attR	TTTGTCAGTAAATCTG	NA	NA	NA	NA
