assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002078995.1_ASM207899v1	NZ_CP016726	Lactococcus lactis subsp. lactis strain UC08 plasmid pUC08A, complete sequence	1	88756-88911	1	PILER-CR	no		csa3	Orphan	TATGACGTAAAAATGTTGTATTT	23	0	0	NA	NA	NA	2	2	Orphan	cas3,RT,DEDDh,csa3,DinG	NA|65aa|up_5|NZ_CP016726.1_81682_81877_-,NA	NA|295aa|up_9|NZ_CP016726.1_77868_78753_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|320aa|up_8|NZ_CP016726.1_78762_79722_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|320aa|up_7|NZ_CP016726.1_79702_80662_-	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|339aa|up_6|NZ_CP016726.1_80658_81675_-	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|65aa|up_5|NZ_CP016726.1_81682_81877_-	NA	NA|74aa|up_4|NZ_CP016726.1_82099_82321_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|230aa|up_3|NZ_CP016726.1_82351_83041_-	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|182aa|up_2|NZ_CP016726.1_83126_83672_-	cd01043, DPS, DPS protein, ferritin-like diiron-binding domain	NA|76aa|up_1|NZ_CP016726.1_83720_83948_-	COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism]	NA|621aa|up_0|NZ_CP016726.1_84653_86516_-	cd02079, P-type_ATPase_HM, P-type heavy metal-transporting ATPase	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
GCF_002078995.1_ASM207899v1	NZ_CP015903	Lactococcus lactis subsp. lactis strain UC08 chromosome, complete genome	1	492841-492929	1	CRISPRCasFinder	no		cas3,RT,DEDDh,csa3,DinG	Orphan	GTCGCATTGAACTGACATGAATCT	24	0	0	NA	NA	NA	1	1	Orphan	cas3,RT,DEDDh,csa3,DinG	NA|113aa|up_1|NZ_CP015903.1_490070_490409_+,NA	NA|254aa|up_9|NZ_CP015903.1_473436_474198_+	cd01637, IMPase_like, Inositol-monophosphatase-like domains	NA|428aa|up_8|NZ_CP015903.1_474288_475572_+	PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated	NA|64aa|up_7|NZ_CP015903.1_475571_475763_+	pfam11772, EpuA, DNA-directed RNA polymerase subunit beta	NA|428aa|up_6|NZ_CP015903.1_475919_477203_+	PRK01490, tig, trigger factor; Provisional	NA|638aa|up_5|NZ_CP015903.1_484063_485977_+	PRK05667, dnaG, DNA primase; Validated	NA|448aa|up_4|NZ_CP015903.1_486053_487397_+	PRK09210, PRK09210, RNA polymerase sigma factor RpoD; Validated	NA|248aa|up_3|NZ_CP015903.1_487511_488255_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|434aa|up_2|NZ_CP015903.1_488485_489787_+	cd17345, MFS_GlpT, Glycerol-3-Phosphate Transporter of the Major Facilitator Superfamily of transporters	NA|113aa|up_1|NZ_CP015903.1_490070_490409_+	NA	NA|749aa|up_0|NZ_CP015903.1_490459_492706_+	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones]	NA|157aa|down_0|NZ_CP015903.1_492995_493466_-	COG1959, COG1959, Predicted transcriptional regulator [Transcription]	NA|338aa|down_1|NZ_CP015903.1_493637_494651_+	TIGR01534, Glyceraldehyde-3-phosphate_dehydrogenase, glyceraldehyde-3-phosphate dehydrogenase, type I	NA|212aa|down_2|NZ_CP015903.1_494793_495429_-	PRK00150, def, peptide deformylase; Reviewed	NA|152aa|down_3|NZ_CP015903.1_495582_496038_+	PRK00714, PRK00714, RNA pyrophosphohydrolase; Reviewed	NA|693aa|down_4|NZ_CP015903.1_496048_498127_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|270aa|down_5|NZ_CP015903.1_498322_499132_+	cd13620, PBP2_GltS, Substrate binding domain of glutamate or arginine ABC transporter, a member of the type 2 periplasmic binding fold protein superfamily	NA|373aa|down_6|NZ_CP015903.1_499146_500265_+	COG0624, ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]	NA|152aa|down_7|NZ_CP015903.1_500332_500788_-	PRK00006, fabZ, 3-hydroxyacyl-ACP dehydratase FabZ	NA|251aa|down_8|NZ_CP015903.1_501063_501816_+	PRK06079, PRK06079, enoyl-[acyl-carrier-protein] reductase FabI	NA|321aa|down_9|NZ_CP015903.1_502188_503151_-	PRK02463, PRK02463, OxaA-like protein precursor; Provisional
GCF_002078995.1_ASM207899v1	NZ_CP015903	Lactococcus lactis subsp. lactis strain UC08 chromosome, complete genome	2	1163118-1163230	2	CRISPRCasFinder	no		cas3,RT,DEDDh,csa3,DinG	Orphan	TGCGATTGAATAGTGAGCATTTTAGTTGTAGATAAAAGAAC	41	0	0	NA	NA	NA	1	1	Orphan	cas3,RT,DEDDh,csa3,DinG	NA,NA	NA|201aa|up_9|NZ_CP015903.1_1154157_1154760_+	cd07914, IGPD, Imidazoleglycerol-phosphate dehydratase	NA|263aa|up_8|NZ_CP015903.1_1154756_1155545_+	COG3231, Aph, Aminoglycoside phosphotransferase [Translation, ribosomal structure and biogenesis]	NA|203aa|up_7|NZ_CP015903.1_1155583_1156192_+	PRK13141, hisH, imidazole glycerol phosphate synthase subunit HisH; Provisional	NA|240aa|up_6|NZ_CP015903.1_1156192_1156912_+	PRK00748, PRK00748, 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Validated	NA|260aa|up_5|NZ_CP015903.1_1156901_1157681_+	PRK02083, PRK02083, imidazole glycerol phosphate synthase subunit HisF; Provisional	NA|213aa|up_4|NZ_CP015903.1_1157677_1158316_+	PRK02759, PRK02759, bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE	NA|270aa|up_3|NZ_CP015903.1_1158316_1159126_+	TIGR01856, Probable_histidinol-phosphatase, histidinol phosphate phosphatase, HisJ family	NA|320aa|up_2|NZ_CP015903.1_1159139_1160099_-	PRK00142, PRK00142, rhodanese-related sulfurtransferase	NA|514aa|up_1|NZ_CP015903.1_1160524_1162066_+	PRK00915, PRK00915, 2-isopropylmalate synthase; Validated	NA|346aa|up_0|NZ_CP015903.1_1162077_1163115_+	PRK00772, PRK00772, 3-isopropylmalate dehydrogenase; Provisional	NA|461aa|down_0|NZ_CP015903.1_1163333_1164716_+	PRK05478, PRK05478, 3-isopropylmalate dehydratase large subunit	NA|192aa|down_1|NZ_CP015903.1_1164735_1165311_+	PRK01641, leuD, 3-isopropylmalate dehydratase small subunit	NA|260aa|down_2|NZ_CP015903.1_1165324_1166104_+	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|571aa|down_3|NZ_CP015903.1_1166225_1167938_+	PRK00911, PRK00911, dihydroxy-acid dehydratase; Provisional	NA|576aa|down_4|NZ_CP015903.1_1167948_1169676_+	PRK07282, PRK07282, acetolactate synthase large subunit	NA|159aa|down_5|NZ_CP015903.1_1169668_1170145_+	PRK11895, ilvH, acetolactate synthase 3 regulatory subunit; Reviewed	NA|341aa|down_6|NZ_CP015903.1_1170190_1171213_+	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional	NA|417aa|down_7|NZ_CP015903.1_1171268_1172519_+	PRK08639, PRK08639, threonine dehydratase; Validated	NA|237aa|down_8|NZ_CP015903.1_1172634_1173345_+	TIGR01252, Alpha-acetolactate_decarboxylase, alpha-acetolactate decarboxylase	NA|127aa|down_9|NZ_CP015903.1_1173385_1173766_+	TIGR00004, RutC_family_protein, reactive intermediate/imine deaminase
