The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP015903	Lactococcus lactis subsp. lactis strain UC08 chromosome, complete genome	2381741	378222	399878	2381741	integrase	Lactococcus_phage(50.0%)	32	370093:370112	407648:407667
370093:370112	attL	AAATAAAAAGTTACTGACAG	NA	NA	NA	NA
WP_003131595.1|378222_378540_+	thioredoxin	NA	A0A0K2FIM3	Achromobacter_phage	30.4	4.5e-05
WP_003131594.1|378625_379252_+	DUF4479 domain-containing protein	NA	NA	NA	NA	NA
WP_023188995.1|379414_380755_+	NADH oxidase	NA	NA	NA	NA	NA
WP_081199217.1|380843_381233_+	single-stranded DNA-binding protein	NA	A0A0K0MWE1	Streptococcus_phage	45.0	1.8e-24
WP_003131589.1|381352_381637_+	co-chaperone GroES	NA	A0A221S386	uncultured_virus	44.1	3.1e-13
WP_003131585.1|381725_383354_+	molecular chaperone GroEL	NA	A0A219YK78	uncultured_virus	56.8	4.9e-156
WP_003131583.1|383399_384212_-	MBL fold metallo-hydrolase	NA	A0A0C5AJ83	Bacteriophage	38.1	3.1e-34
WP_012897229.1|384380_385823_-	cell wall metabolism sensor histidine kinase WalK	NA	W8CYF6	Bacillus_phage	33.0	1.4e-32
WP_054832613.1|385815_386508_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	39.0	7.7e-42
WP_012897230.1|386693_387329_+	thymidylate kinase	NA	M1PSC7	Streptococcus_phage	65.0	5.4e-74
WP_081199219.1|387461_388322_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	44.5	1.6e-65
WP_023188991.1|388373_389156_+	Signal peptidase-like protein	NA	NA	NA	NA	NA
WP_011675472.1|389148_389475_+	DNA replication initiation control protein YabA	NA	NA	NA	NA	NA
WP_003131568.1|389474_390350_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	65.4	8.7e-99
WP_012897234.1|390426_390618_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081199221.1|391216_391402_-	hypothetical protein	NA	A5GZ68	Lactococcus_phage	86.5	2.4e-19
WP_081199223.1|391945_392278_-	hypothetical protein	NA	Q9AZE0	Lactococcus_phage	69.4	2.1e-37
WP_058225857.1|392277_392589_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081199225.1|392766_393366_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081199227.1|393352_393667_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081199229.1|393959_394700_-	hypothetical protein	NA	A0A1P8BLT1	Lactococcus_phage	41.7	5.3e-41
WP_081199231.1|394699_395437_-	hypothetical protein	NA	A0A1P8BKE9	Lactococcus_phage	95.6	5.1e-68
WP_023163763.1|395449_395776_-	HTH domain-containing protein	NA	Q9AZE7	Lactococcus_phage	88.9	5.2e-49
WP_081199233.1|395762_396026_-	hypothetical protein	NA	Q9AZE9	Lactococcus_phage	75.9	6.1e-32
WP_081200226.1|396022_396211_-	hypothetical protein	NA	Q9AZJ0	Lactococcus_phage	64.5	1.4e-14
WP_054247183.1|396277_396520_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023163767.1|396545_396815_-	hypothetical protein	NA	Q9AZH3	Lactococcus_phage	59.6	1.3e-18
WP_081199235.1|396811_397330_-	hypothetical protein	NA	Q9AZJ3	Lactococcus_phage	45.5	2.6e-18
WP_023163769.1|397334_397529_-	DUF1655 domain-containing protein	NA	Q9AZJ4	Lactococcus_phage	96.9	5.1e-28
WP_081199236.1|397673_397853_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081200228.1|397997_398612_+	XRE family transcriptional regulator	NA	A0A2H4J6F9	uncultured_Caudovirales_phage	34.7	6.4e-08
WP_081199238.1|398678_399878_+|integrase	site-specific integrase	integrase	Q9AZI0	Lactococcus_phage	79.7	3.3e-181
407648:407667	attR	CTGTCAGTAACTTTTTATTT	NA	NA	NA	NA
>prophage 2
NZ_CP015903	Lactococcus lactis subsp. lactis strain UC08 chromosome, complete genome	2381741	978533	1001983	2381741		Staphylococcus_phage(21.43%)	21	NA	NA
WP_003130964.1|978533_979226_+	cell division ATP-binding protein FtsE	NA	G9BWD6	Planktothrix_phage	34.4	2.7e-31
WP_012897609.1|979218_980154_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_012897610.1|980255_981233_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A096XT60	Enterococcus_phage	66.0	1.9e-118
WP_017864416.1|981581_983750_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	61.1	2.3e-257
WP_003130968.1|983885_984308_-	protein NrdI	NA	A0A142F1R4	Bacillus_phage	37.3	2.3e-12
WP_012897612.1|984309_984528_-	NrdH-redoxin	NA	C3U2K9	Lactococcus_phage	47.6	7.6e-12
WP_012897613.1|984701_985340_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_012897614.1|985614_987549_+	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	43.5	1.1e-125
WP_003130976.1|988285_989119_+	3'-5' exonuclease	NA	A0A0K2SUJ2	Clostridium_phage	39.4	3.1e-21
WP_003130977.1|989115_989565_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003130980.1|989839_992314_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	32.2	4.2e-98
WP_003130981.1|992339_993245_-	magnesium transporter CorA family protein	NA	NA	NA	NA	NA
WP_012897616.1|993713_994802_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	38.8	1.9e-50
WP_012897617.1|994801_995452_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	43.1	9.4e-42
WP_023164048.1|995460_996657_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	51.3	2.7e-111
WP_003130993.1|996684_997149_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	53.7	1.8e-39
WP_003130994.1|997251_997704_+	signal peptidase II	NA	NA	NA	NA	NA
WP_003130995.1|997764_998670_+	RluA family pseudouridine synthase	NA	A0A2H4UV25	Bodo_saltans_virus	28.2	5.4e-11
WP_012897621.1|998818_999262_+	acid phosphatase	NA	NA	NA	NA	NA
WP_081199515.1|999401_1001024_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081199517.1|1001026_1001983_+	glycosyltransferase	NA	I1TED8	Salmonella_phage	37.5	5.3e-49
>prophage 3
NZ_CP015903	Lactococcus lactis subsp. lactis strain UC08 chromosome, complete genome	2381741	1265238	1273070	2381741		Lactobacillus_phage(42.86%)	8	NA	NA
WP_081199718.1|1265238_1266450_-	NADPH-dependent FMN reductase	NA	A0A2P0ZL82	Lactobacillus_phage	57.4	6.0e-58
WP_011915229.1|1266503_1267109_-	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	52.7	8.8e-50
WP_081199720.1|1267124_1268048_-	FAD:protein FMN transferase	NA	NA	NA	NA	NA
WP_081199722.1|1268227_1269280_-	BMP family ABC transporter substrate-binding protein	NA	A0A0A7DN02	Lactobacillus_phage	39.7	8.1e-59
WP_081199724.1|1269342_1269822_-	nucleoside 2-deoxyribosyltransferase	NA	A0A1D3SPR3	Enterococcus_phage	47.4	1.0e-32
WP_058220898.1|1269805_1270360_-	TIGR00730 family Rossman fold protein	NA	A0A1D3SNB7	Enterococcus_phage	41.9	1.5e-27
WP_081199726.1|1270362_1271013_-	deoxynucleoside kinase	NA	C1KFI3	Lactobacillus_virus	49.1	6.3e-54
WP_004257908.1|1272332_1273070_-	aquaporin family protein	NA	M1HQW3	Paramecium_bursaria_Chlorella_virus	28.8	2.2e-23
>prophage 4
NZ_CP015903	Lactococcus lactis subsp. lactis strain UC08 chromosome, complete genome	2381741	1542180	1552482	2381741		Synechococcus_phage(33.33%)	7	NA	NA
WP_058208502.1|1542180_1543737_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH	NA	Q58MG4	Prochlorococcus_phage	45.6	8.0e-71
WP_081199871.1|1543912_1544455_-	hypoxanthine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	31.5	2.3e-09
WP_081199873.1|1545759_1546290_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_081199874.1|1546340_1547930_-	ABC transporter ATP-binding protein	NA	F2Y1V6	Organic_Lake_phycodnavirus	34.1	1.1e-11
WP_012898139.1|1548096_1548645_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	31.7	7.2e-19
WP_058223469.1|1548673_1549690_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	M4QRQ6	Synechococcus_phage	41.8	6.4e-61
WP_023164311.1|1549878_1552482_-	chaperone protein ClpB	NA	K4FB40	Cronobacter_phage	33.1	1.1e-125
>prophage 5
NZ_CP015903	Lactococcus lactis subsp. lactis strain UC08 chromosome, complete genome	2381741	1643069	1655331	2381741	integrase	Lactococcus_phage(60.0%)	16	1638653:1638670	1651800:1651817
1638653:1638670	attL	TTATCCATGAGATCCATG	NA	NA	NA	NA
WP_058211228.1|1643069_1643504_-	hypothetical protein	NA	A0A182BQ77	Lactococcus_phage	69.8	6.5e-31
WP_017864808.1|1644071_1644521_-	hypothetical protein	NA	NA	NA	NA	NA
WP_017864809.1|1644925_1645330_-	arsenate reductase (thioredoxin)	NA	A0A2H4PQT9	Staphylococcus_phage	50.4	2.2e-28
WP_081199920.1|1645421_1645982_-	hydrolase	NA	Q38323	Lactococcus_phage	75.2	6.0e-53
WP_081199922.1|1646020_1646341_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042749062.1|1646455_1646686_-	hypothetical protein	NA	Q77NT7	Lactococcus_phage	98.7	2.0e-34
WP_081199924.1|1647025_1647271_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081199926.1|1647425_1647785_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081199928.1|1648141_1648666_+	helix-turn-helix domain-containing protein	NA	A0A1B1IMU5	Lactococcus_phage	82.4	5.4e-48
WP_081199930.1|1648676_1649264_+	hypothetical protein	NA	Q9AZW4	Lactococcus_phage	83.9	1.5e-91
WP_058217137.1|1649265_1649580_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081199932.1|1649635_1650412_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081199934.1|1650541_1651681_+|integrase	site-specific integrase	integrase	A0A1B1IMP1	Lactococcus_phage	96.0	1.6e-206
WP_015426754.1|1651786_1652860_-	carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.3	2.0e-60
1651800:1651817	attR	TTATCCATGAGATCCATG	NA	NA	NA	NA
WP_081199936.1|1652922_1653855_-	aspartate carbamoyltransferase catalytic subunit	NA	M1HWF9	Paramecium_bursaria_Chlorella_virus	30.8	4.4e-24
WP_010906053.1|1654038_1655331_-	uracil permease	NA	Q9KX94	Enterobacteria_phage	35.9	1.6e-61
>prophage 6
NZ_CP015903	Lactococcus lactis subsp. lactis strain UC08 chromosome, complete genome	2381741	1695647	1700458	2381741	holin	Lactococcus_phage(100.0%)	10	NA	NA
WP_081199951.1|1695647_1696502_-	lysozyme	NA	Q8LTJ6	Lactococcus_phage	89.2	5.1e-104
WP_081199952.1|1696503_1696956_-|holin	phage holin	holin	Q8LTJ7	Lactococcus_phage	93.5	2.3e-47
WP_081199955.1|1696997_1697402_-	DUF722 domain-containing protein	NA	A0A1P8BLK0	Lactococcus_phage	100.0	5.6e-69
WP_081199957.1|1697477_1697864_-	hypothetical protein	NA	NA	NA	NA	NA
WP_058208107.1|1697856_1698159_-	hypothetical protein	NA	NA	NA	NA	NA
WP_058223120.1|1698621_1698831_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081199959.1|1698980_1699166_-	hypothetical protein	NA	R9QMC5	Lactococcus_phage	83.6	4.0e-22
WP_081199961.1|1699200_1699692_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081199963.1|1699962_1700244_-	hypothetical protein	NA	A0A1B1IM06	Lactococcus_phage	95.6	2.8e-43
WP_081199964.1|1700227_1700458_-	hypothetical protein	NA	A0A1B1IMQ7	Lactococcus_phage	89.7	3.3e-34
>prophage 7
NZ_CP015903	Lactococcus lactis subsp. lactis strain UC08 chromosome, complete genome	2381741	1795391	1805249	2381741	tRNA	Prochlorococcus_phage(33.33%)	9	NA	NA
WP_003130886.1|1795391_1796153_-	phosphate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.0	1.5e-17
WP_081200002.1|1796318_1797128_-	phosphate ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.5	7.0e-10
WP_003130884.1|1797161_1798055_-	phosphate ABC transporter, permease protein PstA	NA	NA	NA	NA	NA
WP_021722156.1|1798054_1798978_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_017864882.1|1799098_1799950_-	phosphate ABC transporter substrate-binding protein	NA	E3SNT9	Prochlorococcus_phage	27.3	4.2e-05
WP_081200004.1|1800296_1801193_-	phosphate ABC transporter substrate-binding protein	NA	E3SM63	Prochlorococcus_phage	32.4	7.2e-08
WP_003130878.1|1801469_1801937_-	SsrA-binding protein	NA	W5RAM5	Staphylococcus_phage	56.6	2.7e-43
WP_081200006.1|1801968_1802544_-	esterase	NA	NA	NA	NA	NA
WP_081200008.1|1802630_1805249_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	33.3	1.9e-64
>prophage 8
NZ_CP015903	Lactococcus lactis subsp. lactis strain UC08 chromosome, complete genome	2381741	2287793	2300417	2381741	capsid	Lactococcus_phage(80.0%)	20	NA	NA
WP_023163769.1|2287793_2287988_+	DUF1655 domain-containing protein	NA	Q9AZJ4	Lactococcus_phage	96.9	5.1e-28
WP_081200172.1|2287991_2288516_+	hypothetical protein	NA	Q9AZJ3	Lactococcus_phage	74.1	3.4e-66
WP_058208546.1|2288512_2288665_+	hypothetical protein	NA	Q9AZH4	Lactococcus_phage	91.8	4.6e-16
WP_058208545.1|2288661_2288943_+	hypothetical protein	NA	Q9AZJ1	Lactococcus_phage	94.6	5.1e-45
WP_081200174.1|2288986_2289226_+	hypothetical protein	NA	Q9AZJ0	Lactococcus_phage	92.4	2.8e-36
WP_058208543.1|2289222_2289477_+	hypothetical protein	NA	Q9AZE9	Lactococcus_phage	88.0	7.9e-37
WP_058208542.1|2289473_2289785_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081200176.1|2289781_2290108_+	hypothetical protein	NA	Q9AZE7	Lactococcus_phage	68.5	1.5e-35
WP_058208540.1|2290120_2290915_+	hypothetical protein	NA	Q9AZI6	Lactococcus_phage	92.8	2.5e-145
WP_058208539.1|2290925_2292560_+	DNA primase	NA	Q9AZI5	Lactococcus_phage	89.3	4.2e-288
WP_081200178.1|2292914_2294144_+|capsid	phage major capsid protein	capsid	E9LUQ3	Lactobacillus_phage	62.1	2.6e-141
WP_081200180.1|2294162_2294783_+	hypothetical protein	NA	NA	NA	NA	NA
WP_032398806.1|2294871_2295204_+	hypothetical protein	NA	Q9AZE0	Lactococcus_phage	85.2	5.5e-46
WP_081200285.1|2295308_2295644_+	sigma-70 family RNA polymerase sigma factor	NA	Q9AZD9	Lactococcus_phage	70.3	5.9e-32
WP_081200182.1|2295634_2296132_+	HNH endonuclease	NA	Q9AZT3	Lactococcus_phage	69.0	2.4e-61
WP_003131983.1|2296822_2297023_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003131984.1|2297081_2298422_-	type I glutamate--ammonia ligase	NA	A0A2P1EM84	Moumouvirus	23.7	1.8e-10
WP_003131985.1|2298483_2298849_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010906378.1|2298949_2299387_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
WP_021723261.1|2299799_2300417_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	3.4e-09
>prophage 1
NZ_CP016726	Lactococcus lactis subsp. lactis strain UC08 plasmid pUC08A, complete sequence	89015	30348	45486	89015	bacteriocin,protease,transposase	Streptococcus_phage(50.0%)	23	NA	NA
WP_081200312.1|30348_31239_-|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_058207127.1|31305_31569_+	hypothetical protein	NA	NA	NA	NA	NA
WP_058224052.1|32039_32222_+	hypothetical protein	NA	NA	NA	NA	NA
WP_058207125.1|32235_32559_+|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
WP_081200314.1|32786_33068_+|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
WP_081200316.1|33238_33541_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010890675.1|33533_33809_-	DUF2089 domain-containing protein	NA	NA	NA	NA	NA
WP_010890649.1|34038_34383_+	PadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_081200318.1|34379_35207_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004234939.1|35396_35687_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_010905146.1|35782_36544_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	42.6	5.3e-44
WP_081200320.1|36681_37455_+	phosphorylase	NA	F5CA76	Streptococcus_phi-m46.1-like_phage	38.9	7.8e-19
WP_081200322.1|37853_38276_+	selenium binding protein	NA	NA	NA	NA	NA
WP_002329905.1|38563_38974_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_021723412.1|39373_40072_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_081200324.1|40353_40737_+	DDE domain-containing protein	NA	A0A1X9I6C6	Streptococcus_phage	55.6	2.9e-51
WP_046124036.1|40797_41634_-	AraC family transcriptional regulator	NA	D0R0F8	Streptococcus_phage	50.2	2.7e-73
WP_032946499.1|41834_42428_-	hypothetical protein	NA	A0A2H4UU96	Bodo_saltans_virus	29.5	9.0e-07
WP_081200326.1|42433_43114_-	hypothetical protein	NA	NA	NA	NA	NA
WP_021723414.1|43534_43726_-	hypothetical protein	NA	NA	NA	NA	NA
WP_032944491.1|43747_43963_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046125041.1|44389_44656_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046782564.1|44805_45486_-|transposase	IS6-like element ISS1S family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	84.5	6.5e-110
