assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002096055.1_ASM209605v1	NZ_CP020715	Cnuibacter physcomitrellae strain XA(T) chromosome, complete genome	1	248079-248181	1	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh	Orphan	GTTTATGAGCAGTGGATGCGCGC	23	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,PD-DExK	NA|146aa|up_6|NZ_CP020715.1_239648_240086_-,NA	NA|470aa|up_9|NZ_CP020715.1_237428_238838_-	pfam03816, LytR_cpsA_psr, Cell envelope-related transcriptional attenuator domain	NA|139aa|up_8|NZ_CP020715.1_238911_239328_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|58aa|up_7|NZ_CP020715.1_239369_239543_-	PRK12452, PRK12452, cardiolipin synthase	NA|146aa|up_6|NZ_CP020715.1_239648_240086_-	NA	NA|637aa|up_5|NZ_CP020715.1_240260_242171_+	PRK08294, PRK08294, phenol 2-monooxygenase; Provisional	NA|509aa|up_4|NZ_CP020715.1_242687_244214_+	cd01298, ATZ_TRZ_like, TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases	NA|228aa|up_3|NZ_CP020715.1_244210_244894_+	cd07251, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|362aa|up_2|NZ_CP020715.1_244999_246085_+	cd06354, PBP1_PrnA-like, periplasmic binding domain of basic membrane lipoprotein, PnrA, in Treponema pallidum and its homologs from other bacteria and Archaea	NA|313aa|up_1|NZ_CP020715.1_246171_247110_+	cd02651, nuc_hydro_IU_UC_XIUA, nuc_hydro_IU_UC_XIUA: inosine-uridine preferring, xanthosine-inosine-uridine-adenosine-preferring and, uridine-cytidine preferring nucleoside hydrolases	NA|284aa|up_0|NZ_CP020715.1_247140_247992_+	PRK05756, PRK05756, pyridoxal kinase PdxY	NA|493aa|down_0|NZ_CP020715.1_248382_249861_-	pfam02720, DUF222, Domain of unknown function (DUF222)	NA|69aa|down_1|NZ_CP020715.1_249928_250135_-	pfam03381, CDC50, LEM3 (ligand-effect modulator 3) family / CDC50 family	NA|545aa|down_2|NZ_CP020715.1_250298_251933_+	cd01948, EAL, EAL domain	NA|246aa|down_3|NZ_CP020715.1_252022_252760_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|220aa|down_4|NZ_CP020715.1_252864_253524_+	COG1075, LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]	NA|513aa|down_5|NZ_CP020715.1_253550_255089_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|620aa|down_6|NZ_CP020715.1_255172_257032_-	COG3250, LacZ, Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]	NA|344aa|down_7|NZ_CP020715.1_257028_258060_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|445aa|down_8|NZ_CP020715.1_258198_259533_+	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold	NA|319aa|down_9|NZ_CP020715.1_259579_260536_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]
GCF_002096055.1_ASM209605v1	NZ_CP020715	Cnuibacter physcomitrellae strain XA(T) chromosome, complete genome	2	830538-830633	2	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh	Orphan	ACTCGGAAAGCGCTCTTTCCGGG	23	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,PD-DExK	NA|370aa|up_0|NZ_CP020715.1_829336_830446_+,NA|170aa|down_0|NZ_CP020715.1_830830_831340_-,NA|110aa|down_8|NZ_CP020715.1_841312_841642_-	NA|224aa|up_9|NZ_CP020715.1_819039_819711_-	pfam10708, DUF2510, Protein of unknown function (DUF2510)	NA|247aa|up_8|NZ_CP020715.1_819776_820517_-	pfam10708, DUF2510, Protein of unknown function (DUF2510)	NA|355aa|up_7|NZ_CP020715.1_820660_821725_+	PRK05720, mtnA, methylthioribose-1-phosphate isomerase; Reviewed	NA|302aa|up_6|NZ_CP020715.1_822820_823726_+	cd01629, HAD_EP, Enolase-phosphatase similar to human enolase-phosphatase E1 and and Xanthomonas oryzae pv	NA|185aa|up_5|NZ_CP020715.1_823809_824364_+	TIGR03328, dehydratase-enolase-phosphatase_complex_1, methylthioribulose-1-phosphate dehydratase	NA|462aa|up_4|NZ_CP020715.1_824484_825870_-	pfam01070, FMN_dh, FMN-dependent dehydrogenase	NA|261aa|up_3|NZ_CP020715.1_825899_826682_-	COG2186, FadR, Transcriptional regulators [Transcription]	NA|588aa|up_2|NZ_CP020715.1_826829_828593_-	COG0661, AarF, Predicted unusual protein kinase [General function prediction only]	NA|195aa|up_1|NZ_CP020715.1_828597_829182_-	COG1695, COG1695, Predicted transcriptional regulators [Transcription]	NA|370aa|up_0|NZ_CP020715.1_829336_830446_+	NA	NA|170aa|down_0|NZ_CP020715.1_830830_831340_-	NA	NA|468aa|down_1|NZ_CP020715.1_831493_832897_-	PRK00701, PRK00701, divalent metal cation transporter MntH	NA|350aa|down_2|NZ_CP020715.1_833025_834075_-	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|575aa|down_3|NZ_CP020715.1_834071_835796_-	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|372aa|down_4|NZ_CP020715.1_835792_836908_-	cd06305, PBP1_methylthioribose_binding-like, similar to methylthioribose-binding protein of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein (PBP1) superfamily	NA|192aa|down_5|NZ_CP020715.1_837078_837654_+	cd02232, cupin_ARD, acireductone dioxygenase (ARD), cupin domain	NA|686aa|down_6|NZ_CP020715.1_837735_839793_-	TIGR01667, Uncharacterized_protein_HI_1680, integral membrane protein, YccS/YhfK family	NA|356aa|down_7|NZ_CP020715.1_840059_841127_+	cd02433, Nodulin-21_like_2, Nodulin-21 and CCC1-related protein family	NA|110aa|down_8|NZ_CP020715.1_841312_841642_-	NA	NA|403aa|down_9|NZ_CP020715.1_841727_842936_-	cd01163, DszC, Dibenzothiophene (DBT) desulfurization enzyme C
GCF_002096055.1_ASM209605v1	NZ_CP020715	Cnuibacter physcomitrellae strain XA(T) chromosome, complete genome	3	1150150-1150336	3	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh	Orphan	AGGCGCGGCTGGGCAGCGGTGCGTCCCGCGCCTTCTGGGTGTGTG	45	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,PD-DExK	NA,NA|89aa|down_4|NZ_CP020715.1_1156978_1157245_-	NA|301aa|up_9|NZ_CP020715.1_1142282_1143185_+	pfam13462, Thioredoxin_4, Thioredoxin	NA|171aa|up_8|NZ_CP020715.1_1143409_1143922_-	PRK14054, PRK14054, peptide-methionine (S)-S-oxide reductase	NA|398aa|up_7|NZ_CP020715.1_1143991_1145185_-	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|176aa|up_6|NZ_CP020715.1_1145316_1145844_-	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA	NA|134aa|up_5|NZ_CP020715.1_1145865_1146267_-	pfam01641, SelR, SelR domain	NA|149aa|up_4|NZ_CP020715.1_1146358_1146805_+	COG2153, ElaA, Predicted acyltransferase [General function prediction only]	NA|97aa|up_3|NZ_CP020715.1_1146970_1147261_+	pfam11662, DUF3263, Protein of unknown function (DUF3263)	NA|200aa|up_2|NZ_CP020715.1_1147268_1147868_+	pfam13399, LytR_C, LytR cell envelope-related transcriptional attenuator	NA|68aa|up_1|NZ_CP020715.1_1148049_1148253_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|540aa|up_0|NZ_CP020715.1_1148442_1150062_+	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|633aa|down_0|NZ_CP020715.1_1150634_1152533_-	cd00075, HATPase, Histidine kinase-like ATPase domain	NA|231aa|down_1|NZ_CP020715.1_1152543_1153236_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|547aa|down_2|NZ_CP020715.1_1153319_1154960_-	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair]	NA|631aa|down_3|NZ_CP020715.1_1155089_1156982_-	pfam13625, Helicase_C_3, Helicase conserved C-terminal domain	NA|89aa|down_4|NZ_CP020715.1_1156978_1157245_-	NA	NA|127aa|down_5|NZ_CP020715.1_1157321_1157702_+	cd04458, CSP_CDS, Cold-Shock Protein (CSP) contains an S1-like cold-shock domain (CSD) that is found in eukaryotes, prokaryotes, and archaea	NA|215aa|down_6|NZ_CP020715.1_1158178_1158823_+	pfam11228, DUF3027, Protein of unknown function (DUF3027)	NA|372aa|down_7|NZ_CP020715.1_1158910_1160026_-	TIGR01366, Putative_phosphoserine_aminotransferase_PSAT	NA|231aa|down_8|NZ_CP020715.1_1160116_1160809_+	COG1321, TroR, Mn-dependent transcriptional regulator [Transcription]	NA|346aa|down_9|NZ_CP020715.1_1161021_1162059_+	pfam00877, NLPC_P60, NlpC/P60 family
GCF_002096055.1_ASM209605v1	NZ_CP020715	Cnuibacter physcomitrellae strain XA(T) chromosome, complete genome	4	1317125-1317276	4	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh	Orphan	CGCGGGACGCGCCGTCACGCCGCCGCCTCCCGCGAGCGTGATCGCC	46	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,PD-DExK	NA|97aa|up_4|NZ_CP020715.1_1312005_1312296_+,NA|598aa|up_1|NZ_CP020715.1_1314306_1316100_+,NA	NA|351aa|up_9|NZ_CP020715.1_1306072_1307125_+	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|549aa|up_8|NZ_CP020715.1_1307121_1308768_+	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|260aa|up_7|NZ_CP020715.1_1308820_1309600_+	pfam18013, Phage_lysozyme2, Phage tail lysozyme	NA|223aa|up_6|NZ_CP020715.1_1309601_1310270_+	pfam18013, Phage_lysozyme2, Phage tail lysozyme	NA|543aa|up_5|NZ_CP020715.1_1310319_1311948_+	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism]	NA|97aa|up_4|NZ_CP020715.1_1312005_1312296_+	NA	NA|240aa|up_3|NZ_CP020715.1_1312306_1313026_+	COG2945, COG2945, Predicted hydrolase of the alpha/beta superfamily [General function prediction only]	NA|362aa|up_2|NZ_CP020715.1_1313061_1314147_-	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|598aa|up_1|NZ_CP020715.1_1314306_1316100_+	NA	NA|318aa|up_0|NZ_CP020715.1_1316096_1317050_+	COG3118, COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones]	NA|744aa|down_0|NZ_CP020715.1_1317456_1319688_-	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB	NA|663aa|down_1|NZ_CP020715.1_1319687_1321676_-	cd11344, AmyAc_GlgE_like, Alpha amylase catalytic domain found in GlgE-like proteins	NA|854aa|down_2|NZ_CP020715.1_1321885_1324447_+	cd04299, GT35_Glycogen_Phosphorylase-like, proteins similar to glycogen phosphorylase	NA|189aa|down_3|NZ_CP020715.1_1324459_1325026_-	TIGR03613, RutR, pyrimidine utilization regulatory protein R	NA|496aa|down_4|NZ_CP020715.1_1325067_1326555_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|687aa|down_5|NZ_CP020715.1_1326656_1328717_-	cd11326, AmyAc_Glg_debranch, Alpha amylase catalytic domain found in glycogen debranching enzymes	NA|395aa|down_6|NZ_CP020715.1_1328784_1329969_+	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]	NA|328aa|down_7|NZ_CP020715.1_1330255_1331239_-	pfam03372, Exo_endo_phos, Endonuclease/Exonuclease/phosphatase family	NA|381aa|down_8|NZ_CP020715.1_1331391_1332534_+	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed	NA|791aa|down_9|NZ_CP020715.1_1332530_1334903_+	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated
GCF_002096055.1_ASM209605v1	NZ_CP020715	Cnuibacter physcomitrellae strain XA(T) chromosome, complete genome	5	1767685-1767781	5	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh	Orphan	ATCGGAGCGGTGCGCGACATGTC	23	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,PD-DExK	NA|102aa|up_7|NZ_CP020715.1_1759102_1759408_+,NA|224aa|down_3|NZ_CP020715.1_1770473_1771145_+,NA|100aa|down_9|NZ_CP020715.1_1775786_1776086_+	NA|257aa|up_9|NZ_CP020715.1_1757173_1757944_-	TIGR03943, TIGR03943, TIGR03943 family protein	NA|325aa|up_8|NZ_CP020715.1_1757936_1758911_-	COG0701, COG0701, Predicted permeases [General function prediction only]	NA|102aa|up_7|NZ_CP020715.1_1759102_1759408_+	NA	NA|323aa|up_6|NZ_CP020715.1_1759539_1760508_-	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs	NA|450aa|up_5|NZ_CP020715.1_1760655_1762005_-	cd19542, CT_NRPS-like, Terminal Condensation (CT)-like domains of nonribosomal peptide synthetases (NRPSs)	NA|260aa|up_4|NZ_CP020715.1_1762054_1762834_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|407aa|up_3|NZ_CP020715.1_1763009_1764230_+	TIGR00937, Chromate_transport_protein, chromate transporter, chromate ion transporter (CHR) family	NA|201aa|up_2|NZ_CP020715.1_1764423_1765026_+	PRK09646, PRK09646, ECF RNA polymerase sigma factor SigK	NA|328aa|up_1|NZ_CP020715.1_1765022_1766006_+	pfam10099, RskA, Anti-sigma-K factor rskA	NA|355aa|up_0|NZ_CP020715.1_1766002_1767067_+	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs	NA|227aa|down_0|NZ_CP020715.1_1767897_1768578_+	TIGR04282, hypothetical_protein, transferase 1, rSAM/selenodomain-associated	NA|146aa|down_1|NZ_CP020715.1_1768673_1769111_-	PRK13822, PRK13822, conjugal transfer coupling protein TraG; Provisional	NA|405aa|down_2|NZ_CP020715.1_1769107_1770322_-	cd00321, SO_family_Moco, Sulfite oxidase (SO) family, molybdopterin binding domain	NA|224aa|down_3|NZ_CP020715.1_1770473_1771145_+	NA	NA|501aa|down_4|NZ_CP020715.1_1771279_1772782_+	COG5650, COG5650, Predicted integral membrane protein [Function unknown]	NA|415aa|down_5|NZ_CP020715.1_1772727_1773972_+	TIGR03181, PDH_E1_alph_x, pyruvate dehydrogenase E1 component, alpha subunit	NA|169aa|down_6|NZ_CP020715.1_1773995_1774502_+	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system	NA|186aa|down_7|NZ_CP020715.1_1774642_1775200_+	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|198aa|down_8|NZ_CP020715.1_1775196_1775790_+	pfam03780, Asp23, Asp23 family, cell envelope-related function	NA|100aa|down_9|NZ_CP020715.1_1775786_1776086_+	NA
GCF_002096055.1_ASM209605v1	NZ_CP020715	Cnuibacter physcomitrellae strain XA(T) chromosome, complete genome	6	2177342-2177422	6	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh	Orphan	GAACGGGTTGTTGCCGGGACGCGG	24	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,PD-DExK	NA|125aa|up_4|NZ_CP020715.1_2171196_2171571_-,NA|123aa|up_3|NZ_CP020715.1_2171706_2172075_-,NA	NA|445aa|up_9|NZ_CP020715.1_2165528_2166863_+	PRK08262, PRK08262, M20 family peptidase	NA|193aa|up_8|NZ_CP020715.1_2166875_2167454_-	cd01828, sialate_O-acetylesterase_like2, sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases	NA|518aa|up_7|NZ_CP020715.1_2167450_2169004_-	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	NA|405aa|up_6|NZ_CP020715.1_2169045_2170260_-	cd17339, MFS_NIMT_CynX_like, 2-nitroimidazole and cyanate transporters and similar proteins of the Major Facilitator Superfamily of transporters	NA|310aa|up_5|NZ_CP020715.1_2170270_2171200_-	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase	NA|125aa|up_4|NZ_CP020715.1_2171196_2171571_-	NA	NA|123aa|up_3|NZ_CP020715.1_2171706_2172075_-	NA	NA|583aa|up_2|NZ_CP020715.1_2172076_2173825_-	PRK03287, truB, tRNA pseudouridine synthase B; Provisional	NA|266aa|up_1|NZ_CP020715.1_2173823_2174621_+	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair]	NA|149aa|up_0|NZ_CP020715.1_2174590_2175037_-	PRK00521, rbfA, 30S ribosome-binding factor RbfA	NA|90aa|down_0|NZ_CP020715.1_2178006_2178276_-	pfam04296, DUF448, Protein of unknown function (DUF448)	NA|332aa|down_1|NZ_CP020715.1_2178342_2179338_-	PRK12327, nusA, transcription elongation factor NusA; Provisional	NA|588aa|down_2|NZ_CP020715.1_2179423_2181187_-	PRK09194, PRK09194, prolyl-tRNA synthetase; Provisional	NA|177aa|down_3|NZ_CP020715.1_2181300_2181831_+	COG0350, Ada, Methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair]	NA|208aa|down_4|NZ_CP020715.1_2181838_2182462_+	PRK00901, PRK00901, methylated-DNA--protein-cysteine methyltransferase; Provisional	NA|247aa|down_5|NZ_CP020715.1_2182836_2183577_-	PRK02101, PRK02101, peroxide stress protein YaaA	NA|89aa|down_6|NZ_CP020715.1_2183648_2183915_-	PRK13442, atpC, F0F1 ATP synthase subunit epsilon; Provisional	NA|488aa|down_7|NZ_CP020715.1_2183917_2185381_-	PRK09280, PRK09280, F0F1 ATP synthase subunit beta; Validated	NA|300aa|down_8|NZ_CP020715.1_2185398_2186298_-	PRK05621, PRK05621, F0F1 ATP synthase subunit gamma; Validated	NA|546aa|down_9|NZ_CP020715.1_2186301_2187939_-	PRK09281, PRK09281, F0F1 ATP synthase subunit alpha; Validated
GCF_002096055.1_ASM209605v1	NZ_CP020715	Cnuibacter physcomitrellae strain XA(T) chromosome, complete genome	7	3001463-3001629	7	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh	Orphan	AGCCCACGGATCTGACACTCGTGACGACTCCCGGCCCATGAACCCACCACAACTG	55	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,PD-DExK	NA|240aa|up_3|NZ_CP020715.1_2996507_2997227_-,NA	NA|130aa|up_9|NZ_CP020715.1_2991948_2992338_-	PRK00157, rplL, 50S ribosomal protein L7/L12; Reviewed	NA|172aa|up_8|NZ_CP020715.1_2992379_2992895_-	PRK00099, rplJ, 50S ribosomal protein L10; Reviewed	NA|55aa|up_7|NZ_CP020715.1_2993203_2993368_-	pfam09972, DUF2207, Predicted membrane protein (DUF2207)	NA|478aa|up_6|NZ_CP020715.1_2993451_2994885_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|256aa|up_5|NZ_CP020715.1_2994938_2995706_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|214aa|up_4|NZ_CP020715.1_2995782_2996424_-	pfam09588, YqaJ, YqaJ-like viral recombinase domain	NA|240aa|up_3|NZ_CP020715.1_2996507_2997227_-	NA	NA|321aa|up_2|NZ_CP020715.1_2997432_2998395_+	cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases	NA|179aa|up_1|NZ_CP020715.1_2998670_2999207_-	COG0456, RimI, Acetyltransferases [General function prediction only]	NA|462aa|up_0|NZ_CP020715.1_2999507_3000893_+	TIGR00720, hypothetical_protein_NEICINOT_00681, L-serine dehydratase, iron-sulfur-dependent, single chain form	NA|302aa|down_0|NZ_CP020715.1_3001924_3002830_-	pfam18741, MTES_1575, REase_MTES_1575	NA|230aa|down_1|NZ_CP020715.1_3003019_3003709_-	PRK05424, rplA, 50S ribosomal protein L1; Validated	NA|144aa|down_2|NZ_CP020715.1_3003722_3004154_-	PRK00140, rplK, 50S ribosomal protein L11; Validated	NA|316aa|down_3|NZ_CP020715.1_3004427_3005375_-	PRK05609, nusG, transcription antitermination protein NusG; Validated	NA|93aa|down_4|NZ_CP020715.1_3005332_3005611_-	PRK07597, secE, preprotein translocase subunit SecE; Reviewed	NA|345aa|down_5|NZ_CP020715.1_3005859_3006894_+	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|211aa|down_6|NZ_CP020715.1_3006890_3007523_+	PRK11111, PRK11111, YchE family NAAT transporter	NA|400aa|down_7|NZ_CP020715.1_3007612_3008812_+	PRK05764, PRK05764, aspartate aminotransferase; Provisional	NA|727aa|down_8|NZ_CP020715.1_3008864_3011045_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|261aa|down_9|NZ_CP020715.1_3011875_3012658_-	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold
GCF_002096055.1_ASM209605v1	NZ_CP020715	Cnuibacter physcomitrellae strain XA(T) chromosome, complete genome	8	3795248-3795347	8	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh	Orphan	CCGTAGCCCGGATGCGGCTGCGGGC	25	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,PD-DExK	NA|83aa|up_9|NZ_CP020715.1_3786609_3786858_+,NA|119aa|up_2|NZ_CP020715.1_3792479_3792836_-,NA|171aa|up_1|NZ_CP020715.1_3792890_3793403_+,NA|54aa|down_1|NZ_CP020715.1_3796630_3796792_+,NA|76aa|down_4|NZ_CP020715.1_3798620_3798848_+,NA|830aa|down_8|NZ_CP020715.1_3801355_3803845_-	NA|83aa|up_9|NZ_CP020715.1_3786609_3786858_+	NA	NA|118aa|up_8|NZ_CP020715.1_3787020_3787374_+	pfam13396, PLDc_N, Phospholipase_D-nuclease N-terminal	NA|668aa|up_7|NZ_CP020715.1_3787378_3789382_-	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|278aa|up_6|NZ_CP020715.1_3789474_3790308_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|253aa|up_5|NZ_CP020715.1_3790344_3791103_-	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs	NA|199aa|up_4|NZ_CP020715.1_3791186_3791783_+	pfam17926, TetR_C_21, Tetracyclin repressor-like, C-terminal domain	NA|209aa|up_3|NZ_CP020715.1_3791860_3792487_+	COG0262, FolA, Dihydrofolate reductase [Coenzyme metabolism]	NA|119aa|up_2|NZ_CP020715.1_3792479_3792836_-	NA	NA|171aa|up_1|NZ_CP020715.1_3792890_3793403_+	NA	NA|146aa|up_0|NZ_CP020715.1_3793601_3794039_-	cd07251, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|255aa|down_0|NZ_CP020715.1_3795745_3796510_+	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|54aa|down_1|NZ_CP020715.1_3796630_3796792_+	NA	NA|277aa|down_2|NZ_CP020715.1_3796760_3797591_-	pfam17765, MLTR_LBD, MmyB-like transcription regulator ligand binding domain	NA|278aa|down_3|NZ_CP020715.1_3797729_3798563_+	PRK06482, PRK06482, SDR family oxidoreductase	NA|76aa|down_4|NZ_CP020715.1_3798620_3798848_+	NA	NA|201aa|down_5|NZ_CP020715.1_3798896_3799499_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|403aa|down_6|NZ_CP020715.1_3799495_3800704_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|173aa|down_7|NZ_CP020715.1_3800808_3801327_+	pfam06695, Sm_multidrug_ex, Putative small multi-drug export protein	NA|830aa|down_8|NZ_CP020715.1_3801355_3803845_-	NA	NA|317aa|down_9|NZ_CP020715.1_3803875_3804826_-	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
GCF_002096055.1_ASM209605v1	NZ_CP020716	Cnuibacter physcomitrellae strain XA(T) plasmid unnamed1, complete sequence	1	103241-103381	1	CRISPRCasFinder	no	csa3	csa3,PD-DExK	Type I-A	GACGGCACCGCCGATGGTGAGACCGCCGACGAC	33	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,PD-DExK	NA|93aa|up_5|NZ_CP020716.1_95892_96171_+,NA|241aa|down_3|NZ_CP020716.1_106685_107408_-	NA|117aa|up_9|NZ_CP020716.1_93364_93715_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|319aa|up_8|NZ_CP020716.1_93717_94674_-	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family	NA|292aa|up_7|NZ_CP020716.1_94670_95546_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|95aa|up_6|NZ_CP020716.1_95542_95827_-	cd00569, HTH_Hin_like, Helix-turn-helix domain of Hin and related proteins	NA|93aa|up_5|NZ_CP020716.1_95892_96171_+	NA	NA|250aa|up_4|NZ_CP020716.1_96565_97315_+	pfam03649, UPF0014, Uncharacterized protein family (UPF0014)	NA|843aa|up_3|NZ_CP020716.1_97315_99844_-	pfam09924, DUF2156, Uncharacterized conserved protein (DUF2156)	NA|282aa|up_2|NZ_CP020716.1_99972_100818_-	PRK12554, PRK12554, undecaprenyl pyrophosphate phosphatase; Reviewed	NA|461aa|up_1|NZ_CP020716.1_100904_102287_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|226aa|up_0|NZ_CP020716.1_102283_102961_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|260aa|down_0|NZ_CP020716.1_103468_104248_-	COG4705, COG4705, Uncharacterized membrane-anchored protein conserved in bacteria [Function unknown]	NA|210aa|down_1|NZ_CP020716.1_104299_104929_-	PRK10847, PRK10847, DedA family protein	NA|249aa|down_2|NZ_CP020716.1_105106_105853_+	COG4705, COG4705, Uncharacterized membrane-anchored protein conserved in bacteria [Function unknown]	NA|241aa|down_3|NZ_CP020716.1_106685_107408_-	NA	NA|241aa|down_4|NZ_CP020716.1_107598_108321_+	cd02432, Nodulin-21_like_1, Nodulin-21 and CCC1-related protein family	NA|223aa|down_5|NZ_CP020716.1_108344_109013_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|393aa|down_6|NZ_CP020716.1_109009_110188_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|300aa|down_7|NZ_CP020716.1_110597_111497_+	pfam02424, ApbE, ApbE family	NA|187aa|down_8|NZ_CP020716.1_111501_112062_+	COG4097, COG4097, Predicted ferric reductase [Inorganic ion transport and metabolism]	NA|405aa|down_9|NZ_CP020716.1_112058_113273_+	COG1894, NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit [Energy production and conversion]
