The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP020773	Staphylococcus lutrae strain ATCC 700373 chromosome, complete genome	2533115	97214	106044	2533115	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
WP_085236080.1|97214_97733_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	48.8	2.0e-26
WP_145951841.1|97744_100030_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	30.6	1.1e-71
WP_085236084.1|100144_102424_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	32.8	5.0e-29
WP_085236086.1|102565_102829_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	45.6	9.8e-06
WP_085236088.1|102845_103985_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	46.9	8.1e-89
WP_085236090.1|104002_105028_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_085236092.1|105045_106044_-	Holliday junction branch migration DNA helicase RuvB	NA	E3T4M7	Cafeteria_roenbergensis_virus	27.9	1.8e-07
>prophage 2
NZ_CP020773	Staphylococcus lutrae strain ATCC 700373 chromosome, complete genome	2533115	222394	231707	2533115	tRNA	Staphylococcus_phage(85.71%)	7	NA	NA
WP_085236271.1|222394_223669_+	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	71.3	1.9e-33
WP_085236273.1|223905_225192_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	28.5	2.2e-26
WP_085236276.1|225803_226115_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	67.0	1.7e-33
WP_085236278.1|226142_228554_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	80.2	0.0e+00
WP_085236280.1|228864_230046_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	63.3	4.0e-139
WP_085236282.1|230193_231147_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	74.8	2.8e-58
WP_085236284.1|231143_231707_+	class I SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	57.3	2.4e-57
>prophage 3
NZ_CP020773	Staphylococcus lutrae strain ATCC 700373 chromosome, complete genome	2533115	235824	257501	2533115		Staphylococcus_phage(95.0%)	24	NA	NA
WP_085236294.1|235824_236808_+	proline dehydrogenase family protein	NA	A0A2H4PQT6	Staphylococcus_phage	66.0	8.5e-119
WP_085236296.1|237087_237552_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	64.0	1.8e-47
WP_085236298.1|237569_238751_-	GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	63.4	3.7e-145
WP_085236300.1|238764_239394_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	55.2	7.0e-58
WP_085236303.1|239398_240442_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	55.5	2.2e-109
WP_085236305.1|240899_242471_-	FAD/NAD(P)-binding protein	NA	A0A2H4PQX2	Staphylococcus_phage	58.1	3.8e-12
WP_085236307.1|243103_243967_-	glucosaminidase domain-containing protein	NA	A0A0E3T9J6	Staphylococcus_phage	39.5	1.1e-37
WP_085236309.1|244121_244343_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085236311.1|244539_245034_+	sigma-70 family RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	39.4	3.5e-20
WP_085238391.1|245033_245471_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085236313.1|245467_245917_-	magnesium transporter	NA	A0A2H4PQT8	Staphylococcus_phage	35.3	1.2e-08
WP_085236315.1|246082_246793_-	transaldolase	NA	E3SKN5	Synechococcus_phage	38.3	2.9e-20
WP_085236317.1|246945_247248_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085236319.1|247278_247644_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	51.7	4.5e-25
WP_085236322.1|247640_247988_+	CrcB family protein	NA	NA	NA	NA	NA
WP_085236324.1|248129_248966_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	71.4	1.8e-114
WP_085236327.1|249199_250111_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	66.7	2.5e-85
WP_085236330.1|250199_251399_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	81.6	1.3e-182
WP_085236333.1|251867_253454_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	75.2	1.3e-238
WP_103322017.1|253610_254360_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	60.9	1.5e-78
WP_085238392.1|254364_254835_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	51.9	7.1e-39
WP_085236338.1|254887_255163_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	71.2	4.7e-27
WP_085236341.1|255108_256101_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	46.1	3.4e-75
WP_085236343.1|256103_257501_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	52.7	1.1e-135
>prophage 4
NZ_CP020773	Staphylococcus lutrae strain ATCC 700373 chromosome, complete genome	2533115	267316	319958	2533115	transposase,tRNA,integrase	Staphylococcus_phage(40.0%)	47	265726:265742	284077:284093
265726:265742	attL	AATATTAATATTAAAGA	NA	NA	NA	NA
WP_085236365.1|267316_267589_+	hypothetical protein	NA	U3PJ31	Staphylococcus_phage	37.1	8.0e-11
WP_085236367.1|267637_268246_-	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	49.2	1.5e-49
WP_145951843.1|268278_269407_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	54.7	1.8e-80
WP_085236368.1|269379_269625_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085236371.1|269621_270905_-|transposase	IS21 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	29.7	1.6e-13
WP_103322076.1|270982_271399_+|integrase	tyrosine-type recombinase/integrase	integrase	U3PJ31	Staphylococcus_phage	45.0	4.6e-26
WP_085236373.1|272162_272738_+	recombinase family protein	NA	E5FFF9	Burkholderia_phage	36.8	6.9e-20
WP_085236376.1|275887_276235_-	complement inhibitor SCIN family protein	NA	A7TWS0	Staphylococcus_phage	44.8	3.6e-16
WP_085236378.1|277101_277656_-	serine hydrolase family protein	NA	NA	NA	NA	NA
WP_085236380.1|278015_279419_-	protoporphyrinogen oxidase	NA	NA	NA	NA	NA
WP_085236382.1|279424_280357_-	ferrochelatase	NA	NA	NA	NA	NA
WP_085236384.1|280394_281429_-	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
WP_085236387.1|281757_282267_+	signal transduction protein TRAP	NA	NA	NA	NA	NA
WP_085236389.1|282330_283545_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_085236391.1|283541_284279_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.7	1.8e-25
284077:284093	attR	TCTTTAATATTAATATT	NA	NA	NA	NA
WP_085236393.1|284414_284840_+	HIT family protein	NA	NA	NA	NA	NA
WP_085236395.1|284916_285273_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085236397.1|285372_285903_+	HTH-type transcriptional regulator Hpr	NA	NA	NA	NA	NA
WP_085236399.1|285950_286502_+	DUF3267 domain-containing protein	NA	NA	NA	NA	NA
WP_085236401.1|286753_287722_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
WP_085236403.1|287946_288888_-	3'-5' exoribonuclease YhaM	NA	NA	NA	NA	NA
WP_085236405.1|288907_291832_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_085236407.1|291835_293023_-	DNA repair exonuclease	NA	NA	NA	NA	NA
WP_085236409.1|293209_293554_-	YlbF/YmcA family competence regulator	NA	NA	NA	NA	NA
WP_085236412.1|293638_294769_-	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_085236415.1|294947_295412_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_085236417.1|296354_297644_+	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA	NA
WP_085236419.1|298033_298906_+	cation transporter	NA	NA	NA	NA	NA
WP_085236421.1|298998_299625_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_085236423.1|299599_300748_-	GAF domain-containing sensor histidine kinase	NA	NA	NA	NA	NA
WP_085236425.1|300890_301721_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_085238393.1|301983_304125_-	RNA degradosome polyphosphate kinase	NA	NA	NA	NA	NA
WP_085236427.1|304222_305749_-	exopolyphosphatase	NA	NA	NA	NA	NA
WP_085236429.1|305770_307156_-	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_085236430.1|307465_307900_-	hypothetical protein	NA	NA	NA	NA	NA
WP_169710755.1|308346_308442_+	hypothetical protein	NA	NA	NA	NA	NA
WP_169710756.1|308677_308842_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085236431.1|308860_309463_-	glucosamine-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_085236432.1|309631_310102_-|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	tRNA	NA	NA	NA	NA
WP_085236433.1|310101_311232_-|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
WP_085236434.1|311407_312139_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.1	2.6e-32
WP_085236435.1|312131_313592_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_085236436.1|313797_314856_-	PTS transporter subunit IIC	NA	NA	NA	NA	NA
WP_085236437.1|315088_316468_-	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_085236441.1|318270_318558_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_142382186.1|318605_318857_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_103322067.1|318828_319958_-|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	54.7	1.8e-80
>prophage 5
NZ_CP020773	Staphylococcus lutrae strain ATCC 700373 chromosome, complete genome	2533115	423326	485087	2533115	transposase,protease,tRNA	uncultured_virus(14.29%)	50	NA	NA
WP_085236647.1|423326_423884_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_103322067.1|425163_426292_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	54.7	1.8e-80
WP_085236649.1|428101_428527_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085236651.1|429439_431059_-	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.2	1.2e-157
WP_085236653.1|431105_431393_-	co-chaperone GroES	NA	A0A221S4A8	uncultured_virus	40.2	1.6e-14
WP_085236656.1|431561_432329_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_169710761.1|432733_433921_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085236660.1|434189_435005_+	carbon-nitrogen family hydrolase	NA	NA	NA	NA	NA
WP_145951851.1|435381_435462_-	delta-lysin family phenol-soluble modulin	NA	NA	NA	NA	NA
WP_085236662.1|435853_436420_+	accessory gene regulator AgrB	NA	NA	NA	NA	NA
WP_085236664.1|436421_436556_+	cyclic lactone autoinducer peptide	NA	NA	NA	NA	NA
WP_085236666.1|436584_437910_+	GHKL domain-containing protein	NA	NA	NA	NA	NA
WP_085236668.1|437890_438607_+	response regulator transcription factor	NA	A0A2H4J4Z6	uncultured_Caudovirales_phage	33.5	4.2e-27
WP_085236670.1|438774_440262_-	sucrose-6-phosphate hydrolase	NA	S6ATV4	Bacillus_phage	23.8	1.7e-09
WP_085236672.1|440841_441489_-	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
WP_085236674.1|441641_443600_+	ABC-F type ribosomal protection protein	NA	A0A2K9L3Z8	Tupanvirus	27.5	9.4e-53
WP_085236676.1|444106_445129_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	38.2	7.8e-59
WP_085236678.1|445121_445592_-	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA	NA
WP_085236680.1|445570_446227_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	tRNA	NA	NA	NA	NA
WP_085236683.1|446207_446666_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_085236685.1|447188_448877_+	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
WP_085236688.1|448895_450650_+	biosynthetic-type acetolactate synthase large subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	28.4	5.0e-53
WP_085236690.1|450646_451120_+	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_085236692.1|451153_452158_+	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_085236694.1|452178_453717_+	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	26.6	5.7e-13
WP_085236696.1|453706_454756_+	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_085236698.1|454759_456130_+	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
WP_085236700.1|456132_456705_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_085236702.1|456717_457986_+	threonine ammonia-lyase IlvA	NA	NA	NA	NA	NA
WP_085236704.1|464191_464650_-	SprT family protein	NA	NA	NA	NA	NA
WP_085238399.1|464642_466793_-	RNA-binding transcriptional accessory protein	NA	NA	NA	NA	NA
WP_085238400.1|467128_468448_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	22.6	9.6e-09
WP_085236706.1|468498_469269_-	RNA polymerase sigma factor SigB	NA	A0A0A0RNH9	Bacillus_phage	34.3	9.8e-22
WP_085238401.1|469243_469723_-	anti-sigma B factor RsbW	NA	NA	NA	NA	NA
WP_085236708.1|469727_470054_-	anti-sigma factor antagonist	NA	NA	NA	NA	NA
WP_085236711.1|470132_471137_-	PP2C family protein-serine/threonine phosphatase	NA	NA	NA	NA	NA
WP_019169266.1|471193_471547_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	Q332J9	Clostridium_botulinum_C_phage	32.8	2.4e-07
WP_085236713.1|471547_471718_-	antitoxin MazE	NA	NA	NA	NA	NA
WP_085236715.1|471802_472951_-	alanine racemase	NA	NA	NA	NA	NA
WP_085236717.1|472984_473335_-	holo-ACP synthase	NA	NA	NA	NA	NA
WP_103322025.1|473331_473841_-	PH domain-containing protein	NA	NA	NA	NA	NA
WP_085236722.1|473846_475349_-	PH domain-containing protein	NA	NA	NA	NA	NA
WP_085236725.1|475341_475815_-	PH domain-containing protein	NA	NA	NA	NA	NA
WP_085238400.1|476157_477477_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	22.6	9.6e-09
WP_085236728.1|477547_479035_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.8	3.7e-57
WP_085236731.1|479448_480816_-	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA	NA
WP_085236733.1|480827_481898_-	D-alanine--D-alanine ligase	NA	NA	NA	NA	NA
WP_085236735.1|482051_483257_+	rod shape-determining protein RodA	NA	NA	NA	NA	NA
WP_085236737.1|483309_484041_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_085236739.1|484061_485087_-|protease	trypsin-like serine protease	protease	NA	NA	NA	NA
>prophage 6
NZ_CP020773	Staphylococcus lutrae strain ATCC 700373 chromosome, complete genome	2533115	601931	629192	2533115	transposase,integrase	Lactococcus_phage(23.08%)	22	612765:612824	634784:634843
WP_169710765.1|601931_603060_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	52.9	1.6e-76
WP_085236836.1|603710_604946_+|transposase	IS21 family transposase	transposase	A0A059NT83	Lactococcus_phage	47.4	1.2e-101
WP_085236837.1|604956_605724_+	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	43.3	3.5e-51
WP_169710750.1|605703_605940_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085236839.1|606026_606266_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085236840.1|606262_606589_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085236841.1|606666_607707_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085236842.1|607696_608608_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085236843.1|608769_609360_-|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	52.9	1.0e-50
WP_085236846.1|611310_611697_-	hypothetical protein	NA	NA	NA	NA	NA
WP_169710768.1|611929_612376_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	A0A0P0I4A4	Acinetobacter_phage	50.4	3.4e-27
612765:612824	attL	TTAACGTTTTGAGAATTGTGGTGAACGACGTGCTTTTTTAAGACCTGGTTTTTTACGTTC	NA	NA	NA	NA
WP_085236849.1|613045_616678_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085236850.1|616701_619668_-	type III restriction-modification system endonuclease	NA	Q71TG1	Escherichia_phage	31.6	4.8e-125
WP_085236851.1|619670_621548_-	site-specific DNA-methyltransferase	NA	Q1MVP0	Enterobacteria_phage	34.6	1.1e-82
WP_085236852.1|621548_621764_-	helix-turn-helix transcriptional regulator	NA	A0A2K5B263	Erysipelothrix_phage	41.4	3.1e-10
WP_169710769.1|622155_622326_-	hypothetical protein	NA	NA	NA	NA	NA
WP_169710770.1|623363_624179_-|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	45.2	1.4e-58
WP_103322067.1|624284_625413_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	54.7	1.8e-80
WP_085236845.1|625443_625731_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_085236854.1|626537_626720_+|integrase	tyrosine-type recombinase/integrase	integrase	M1PFE2	Streptococcus_phage	62.5	5.2e-14
WP_085238406.1|627459_628218_-	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	43.5	2.1e-53
WP_085236855.1|628217_629192_-|transposase	IS21 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	37.2	7.6e-11
634784:634843	attR	TTAACGTTTTGAGAATTGTGGTGAACGACGTGCTTTTTTAAGACCTGGTTTTTTACGTTC	NA	NA	NA	NA
>prophage 7
NZ_CP020773	Staphylococcus lutrae strain ATCC 700373 chromosome, complete genome	2533115	704280	711240	2533115		Streptococcus_phage(33.33%)	8	NA	NA
WP_085236933.1|704280_705243_+	hydroxyacid dehydrogenase	NA	M1HTA3	Paramecium_bursaria_Chlorella_virus	28.9	8.2e-26
WP_085236934.1|705472_706123_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A1B0RXA0	Streptococcus_phage	41.6	8.6e-35
WP_085236935.1|706196_706583_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A1B0RXA0	Streptococcus_phage	36.5	9.3e-05
WP_085236936.1|706638_706920_-	ATP-binding cassette domain-containing protein	NA	A0A2I4R674	Erysipelothrix_phage	35.3	6.5e-08
WP_085236937.1|706938_707739_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_162682398.1|707753_708635_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	29.1	1.3e-17
WP_085236939.1|709307_710435_-	FAD-dependent monooxygenase	NA	NA	NA	NA	NA
WP_085236940.1|710463_711240_-	glucosaminidase domain-containing protein	NA	Q4ZC50	Staphylococcus_virus	40.2	1.9e-36
>prophage 8
NZ_CP020773	Staphylococcus lutrae strain ATCC 700373 chromosome, complete genome	2533115	1262274	1271309	2533115	transposase	Lactococcus_phage(33.33%)	10	NA	NA
WP_085237339.1|1262274_1264296_+	K(+)-transporting ATPase subunit B	NA	E4ZFI9	Streptococcus_phage	30.6	4.4e-45
WP_085237340.1|1264309_1264867_+	K(+)-transporting ATPase subunit C	NA	NA	NA	NA	NA
WP_169710785.1|1265417_1265765_-	hypothetical protein	NA	NA	NA	NA	NA
WP_169710786.1|1265889_1266054_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085237342.1|1266080_1266899_-	hypothetical protein	NA	A0A097PAT7	Streptococcus_pyogenes_phage	46.1	1.5e-52
WP_085237343.1|1267252_1268488_+|transposase	IS21 family transposase	transposase	A0A059NT83	Lactococcus_phage	49.1	8.7e-105
WP_085237344.1|1268499_1269273_+	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	43.8	5.9e-51
WP_085237345.1|1269339_1269693_-	SdpI family protein	NA	NA	NA	NA	NA
WP_085237346.1|1270043_1270352_-|transposase	transposase	transposase	A0ZS58	Staphylococcus_virus	61.9	8.2e-28
WP_169710787.1|1270595_1271309_-	AAA family ATPase	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	27.9	3.6e-10
>prophage 9
NZ_CP020773	Staphylococcus lutrae strain ATCC 700373 chromosome, complete genome	2533115	1335178	1381096	2533115	transposase,tRNA,bacteriocin,protease,integrase	Staphylococcus_phage(31.58%)	46	1335300:1335315	1377541:1377556
WP_142382191.1|1335178_1335649_+|integrase	phage integrase SAM-like domain-containing protein	integrase	NA	NA	NA	NA
1335300:1335315	attL	AAAAAGAAGTAATGGA	NA	NA	NA	NA
WP_169710790.1|1335689_1336250_+|integrase	phage integrase family protein	integrase	S4TP66	Salmonella_phage	36.0	6.9e-09
WP_085237400.1|1336348_1336681_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085237401.1|1336881_1337064_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085237402.1|1337060_1337294_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085237403.1|1338706_1338967_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014614928.1|1339109_1339532_-	hypothetical protein	NA	A0A1Q1PVU5	Staphylococcus_phage	34.9	4.1e-14
WP_085237404.1|1339533_1340043_-	hypothetical protein	NA	A0A1Q1PVV5	Staphylococcus_phage	52.9	9.0e-40
WP_085237405.1|1340750_1342085_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085237406.1|1342246_1343071_+	HNH endonuclease	NA	A0A249XZV1	Enterococcus_phage	41.2	8.1e-06
WP_103322087.1|1343987_1344062_+	DUF933 domain-containing protein	NA	NA	NA	NA	NA
WP_085237407.1|1344317_1345982_+|tRNA	arginine--tRNA ligase	tRNA	A0A2I2L3K1	Orpheovirus	30.7	5.9e-64
WP_085237408.1|1346212_1347649_-	B domain-containing protein	NA	NA	NA	NA	NA
WP_085237409.1|1347975_1348272_+	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_085237410.1|1348293_1348797_+	single-stranded DNA-binding protein	NA	A0A1W6JPL9	Staphylococcus_phage	70.7	2.5e-58
WP_014614919.1|1348848_1349091_+	30S ribosomal protein S18	NA	NA	NA	NA	NA
WP_085237411.1|1349644_1350220_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_085237413.1|1350653_1351544_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	44.5	1.4e-35
WP_085237414.1|1351544_1352297_+	amino acid transporter	NA	NA	NA	NA	NA
WP_085237415.1|1352467_1354459_-	catalase	NA	A0A2K9L572	Tupanvirus	47.7	1.8e-144
WP_085237416.1|1354795_1355176_-	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
WP_085237417.1|1355394_1356384_+	biotin synthase BioB	NA	NA	NA	NA	NA
WP_085237418.1|1356528_1357479_+	DUF1002 domain-containing protein	NA	NA	NA	NA	NA
WP_085237419.1|1357760_1359284_-	alkyl hydroperoxide reductase subunit F	NA	V9VEY6	Lactococcus_phage	31.2	9.7e-21
WP_085237420.1|1359298_1359868_-	peroxiredoxin	NA	NA	NA	NA	NA
WP_085237421.1|1360429_1361185_+	oxygen-insensitive NADPH nitroreductase	NA	NA	NA	NA	NA
WP_085237422.1|1361397_1361688_+|bacteriocin	lactococcin 972 family bacteriocin	bacteriocin	NA	NA	NA	NA
WP_085237423.1|1361712_1363680_+	DUF1430 domain-containing protein	NA	NA	NA	NA	NA
WP_085237424.1|1363680_1364013_+	YxeA family protein	NA	NA	NA	NA	NA
WP_085237425.1|1364009_1364645_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	33.7	1.8e-21
WP_085237426.1|1364745_1366137_-	L-cystine transporter	NA	NA	NA	NA	NA
WP_085237427.1|1366209_1367316_-	glycine oxidase ThiO	NA	NA	NA	NA	NA
WP_085237428.1|1367684_1368284_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_085237429.1|1368396_1369071_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085237430.1|1369316_1369739_-	general stress protein	NA	NA	NA	NA	NA
WP_085237431.1|1370200_1370785_+	xanthine phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_085237432.1|1370781_1372050_+	purine permease	NA	Q9KX94	Enterobacteria_phage	28.4	3.6e-29
WP_085238434.1|1372083_1373550_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.2	3.2e-98
WP_085237433.1|1373573_1375115_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	32.1	6.8e-22
WP_085237434.1|1375208_1376345_-|integrase	site-specific integrase	integrase	A0A1S5S7K9	Streptococcus_phage	39.5	2.6e-71
WP_085237435.1|1376437_1377067_-	helix-turn-helix transcriptional regulator	NA	A0A1W6JQE6	Staphylococcus_phage	47.1	4.0e-45
WP_085237436.1|1377220_1377448_+	helix-turn-helix transcriptional regulator	NA	A0A1W6JQE8	Staphylococcus_phage	56.6	5.1e-11
WP_085237437.1|1377425_1377686_+	hypothetical protein	NA	NA	NA	NA	NA
1377541:1377556	attR	AAAAAGAAGTAATGGA	NA	NA	NA	NA
WP_103322067.1|1377849_1378979_-|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	54.7	1.8e-80
WP_085237438.1|1379082_1380318_+|transposase	IS21 family transposase	transposase	A0A059NT83	Lactococcus_phage	47.7	8.2e-103
WP_085236837.1|1380328_1381096_+	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	43.3	3.5e-51
>prophage 10
NZ_CP020773	Staphylococcus lutrae strain ATCC 700373 chromosome, complete genome	2533115	1737259	1747331	2533115		Acinetobacter_phage(33.33%)	8	NA	NA
WP_085237728.1|1737259_1738309_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.9	3.1e-18
WP_085237729.1|1738397_1738940_+	5'(3')-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_085237730.1|1739207_1740710_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	35.6	6.1e-68
WP_085237731.1|1741064_1742570_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	36.8	1.6e-71
WP_085237732.1|1742840_1743341_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	66.4	5.4e-53
WP_085237733.1|1743358_1744243_-	DMT family transporter	NA	NA	NA	NA	NA
WP_085237734.1|1744864_1745263_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	62.1	4.4e-42
WP_085237735.1|1745225_1747331_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	85.6	0.0e+00
>prophage 11
NZ_CP020773	Staphylococcus lutrae strain ATCC 700373 chromosome, complete genome	2533115	1781008	1786883	2533115		Streptococcus_phage(33.33%)	6	NA	NA
WP_085237766.1|1781008_1781947_+	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	49.2	9.3e-83
WP_085237767.1|1782242_1783151_+	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	33.6	9.5e-08
WP_085237768.1|1783152_1784148_+	YvcK family protein	NA	A1IMD5	Streptococcus_phage	43.8	5.3e-52
WP_085237769.1|1784194_1785139_+	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	39.9	1.6e-53
WP_085237770.1|1785706_1786294_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	55.5	8.2e-53
WP_085237771.1|1786382_1786883_+	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	31.6	6.8e-16
>prophage 12
NZ_CP020773	Staphylococcus lutrae strain ATCC 700373 chromosome, complete genome	2533115	1798936	1814511	2533115	tail,capsid,portal,protease,terminase,integrase,head	Staphylococcus_phage(38.46%)	18	1798365:1798379	1816310:1816324
1798365:1798379	attL	ATATGATTTTTTGGT	NA	NA	NA	NA
WP_085237781.1|1798936_1801297_+	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	39.0	5.6e-92
WP_085237782.1|1801311_1801776_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	83.8	1.1e-68
WP_085237783.1|1802312_1803419_-|integrase	site-specific integrase	integrase	A0A1B2AQ00	Phage_Wrath	43.1	5.1e-80
WP_085237784.1|1803421_1803997_-	helix-turn-helix domain-containing protein	NA	A0A1W6JPB6	Staphylococcus_phage	29.2	3.5e-08
WP_085237785.1|1804131_1804347_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_085237786.1|1804349_1804568_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_085237787.1|1804580_1804784_+	pathogenicity island protein	NA	A0A1W6JQF4	Staphylococcus_phage	76.1	8.0e-24
WP_085237788.1|1804785_1804995_+	hypothetical protein	NA	A0A1W6JPA6	Staphylococcus_phage	60.3	8.8e-18
WP_085237789.1|1804996_1805269_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085237790.1|1805268_1805571_+	DUF1474 family protein	NA	A0A2H4JB50	uncultured_Caudovirales_phage	60.0	1.4e-24
WP_085237791.1|1805668_1808041_+	DNA primase	NA	A0A2H4JCU9	uncultured_Caudovirales_phage	42.8	2.9e-149
WP_085237792.1|1808356_1808698_+	pathogenicity island protein	NA	A0A1W6JQD5	Staphylococcus_phage	74.8	2.1e-45
WP_085237793.1|1808832_1810011_+|portal	phage portal protein	portal	A0A1L2BY94	Clostridium_phage	36.8	8.7e-62
WP_085237794.1|1809997_1810564_+|head,protease	HK97 family phage prohead protease	head,protease	A0A1B1PA08	Enterococcus_phage	35.9	5.5e-22
WP_085237795.1|1810565_1811795_+|capsid	phage major capsid protein	capsid	NA	NA	NA	NA
WP_085237796.1|1811853_1812135_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A0S2GLH6	Bacillus_phage	29.5	1.8e-05
WP_085237798.1|1812554_1812875_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085237799.1|1812867_1814511_+|terminase	terminase large subunit	terminase	A0A290GJW3	Caldibacillus_phage	51.0	2.7e-154
1816310:1816324	attR	ACCAAAAAATCATAT	NA	NA	NA	NA
>prophage 13
NZ_CP020773	Staphylococcus lutrae strain ATCC 700373 chromosome, complete genome	2533115	2022810	2031230	2533115		Synechococcus_phage(33.33%)	9	NA	NA
WP_085237968.1|2022810_2023293_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.9	8.9e-21
WP_085237969.1|2023279_2024413_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_085237970.1|2024409_2025111_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	G8EYA2	Synechococcus_phage	42.1	4.0e-46
WP_085237971.1|2025113_2025374_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_085237972.1|2025375_2026047_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_085237973.1|2026039_2028229_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	38.8	5.1e-140
WP_085238462.1|2028207_2029629_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.0	1.6e-49
WP_085237974.1|2029632_2030664_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	42.4	5.3e-63
WP_085237975.1|2030663_2031230_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	38.9	3.4e-27
>prophage 14
NZ_CP020773	Staphylococcus lutrae strain ATCC 700373 chromosome, complete genome	2533115	2115622	2121688	2533115	holin,integrase	Staphylococcus_phage(100.0%)	7	2115541:2115561	2126255:2126275
2115541:2115561	attL	AATTAGCGTCCTGGGAGGGAT	NA	NA	NA	NA
WP_085238048.1|2115622_2116648_-|integrase	site-specific integrase	integrase	A0A0D4DCG3	Staphylococcus_phage	92.1	3.9e-183
WP_085238049.1|2116826_2117810_-	DUF3644 domain-containing protein	NA	A0A0N9RUA4	Staphylococcus_phage	90.8	1.3e-164
WP_085238465.1|2117857_2118121_-	hypothetical protein	NA	A0A1W6JQ94	Staphylococcus_phage	63.2	8.8e-23
WP_085238050.1|2118414_2119041_-	helix-turn-helix domain-containing protein	NA	A0A1J0MG99	Staphylococcus_phage	99.0	3.2e-111
WP_169710803.1|2119620_2120646_+	hypothetical protein	NA	A0A1J0MFB0	Staphylococcus_phage	87.1	1.3e-173
WP_085238466.1|2120665_2120920_+|holin	phage holin	holin	A0A1J0MFP5	Staphylococcus_phage	86.9	4.3e-35
WP_085238051.1|2120932_2121688_+	CHAP domain-containing protein	NA	A0A1J0MF88	Staphylococcus_phage	96.0	4.8e-146
2126255:2126275	attR	AATTAGCGTCCTGGGAGGGAT	NA	NA	NA	NA
>prophage 15
NZ_CP020773	Staphylococcus lutrae strain ATCC 700373 chromosome, complete genome	2533115	2472476	2481029	2533115		Bacillus_phage(33.33%)	9	NA	NA
WP_085238338.1|2472476_2473853_-	ATP-dependent DNA helicase RecQ	NA	A0A2K9L3P7	Tupanvirus	31.0	2.1e-54
WP_085238339.1|2473845_2474793_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_014613875.1|2474897_2475146_+	ferredoxin	NA	A0A127AYY7	Bacillus_phage	53.3	2.3e-17
WP_085238340.1|2475507_2476053_-	ECF transporter S component	NA	NA	NA	NA	NA
WP_085238341.1|2476467_2478207_-	HAMP domain-containing protein	NA	A0A1V0SGX0	Hokovirus	28.7	4.2e-20
WP_085238478.1|2478193_2478916_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	40.9	5.9e-45
WP_085238342.1|2479030_2479768_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_085238343.1|2479768_2480311_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	28.0	2.8e-07
WP_085238344.1|2480300_2481029_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	34.2	2.8e-10
