The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP008743	Candidatus Nucleicultrix amoebiphila FS5, complete genome	1838212	389634	447345	1838212	protease,transposase,tail,portal,head,capsid,tRNA	Klosneuvirus(13.33%)	59	NA	NA
WP_085783653.1|389634_391161_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	38.6	3.0e-99
WP_085783654.1|391184_392231_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085783655.1|392227_392872_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	40.0	3.4e-36
WP_085783656.1|392875_394003_-	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	32.9	1.3e-49
WP_085783657.1|394015_395005_-	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	54.7	1.2e-16
WP_085783658.1|395089_395899_-	YdcF family protein	NA	NA	NA	NA	NA
WP_085783659.1|396137_396719_-	mobile mystery protein B	NA	NA	NA	NA	NA
WP_085783660.1|396718_397180_-	mobile mystery protein A	NA	NA	NA	NA	NA
WP_085783661.1|397470_397851_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085783662.1|397876_398188_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085783663.1|398413_398821_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085783664.1|398845_399223_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157111112.1|399372_399543_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085783666.1|400131_400908_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085783667.1|400904_401783_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA	NA
WP_085783668.1|401850_402564_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_085783669.1|402597_404349_+	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_085783670.1|404445_405651_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085783671.1|405924_410379_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157111113.1|410618_411623_-|transposase	ISNCY family transposase	transposase	NA	NA	NA	NA
WP_085783673.1|411617_412271_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_085783674.1|412290_412563_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_085783675.1|412758_413235_+	Hsp20 family protein	NA	A0A1B1IW69	uncultured_Mediterranean_phage	42.6	9.4e-23
WP_085783676.1|413763_417414_+	vitamin B12-dependent ribonucleotide reductase	NA	A0A1X9SGV9	Bradyrhizobium_phage	53.9	0.0e+00
WP_085783677.1|417484_418072_+	TIGR00730 family Rossman fold protein	NA	A0A1G5S9X4	Enterococcus_phage	30.2	2.4e-12
WP_085783678.1|418112_418937_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085783679.1|419083_419656_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085783680.1|419700_420741_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085783681.1|421067_421868_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085783682.1|421880_423050_-	ribonuclease D	NA	NA	NA	NA	NA
WP_085783683.1|423174_424959_+|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SIS0	Klosneuvirus	28.3	3.5e-06
WP_085783684.1|424961_425726_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085783685.1|425725_426499_-	toxin-antitoxin system YwqK family antitoxin	NA	NA	NA	NA	NA
WP_085783686.1|426509_429011_-	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	23.7	8.1e-25
WP_085783687.1|429132_429408_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A1S5S8E8	Streptococcus_phage	50.0	8.3e-16
WP_085783688.1|429400_429631_-	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA	NA
WP_085783689.1|429896_430577_-	DNA repair protein RadC	NA	NA	NA	NA	NA
WP_085783690.1|430649_430955_+	DUF167 domain-containing protein	NA	NA	NA	NA	NA
WP_085783691.1|430944_431343_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085783692.1|431435_431927_-	transcription antitermination factor NusB	NA	NA	NA	NA	NA
WP_085783693.1|432213_433356_-	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_085783694.1|433461_433914_-	HIT family protein	NA	NA	NA	NA	NA
WP_085783695.1|433935_435261_-	MFS transporter	NA	NA	NA	NA	NA
WP_085783696.1|435583_436603_+	porphobilinogen synthase	NA	NA	NA	NA	NA
WP_085783697.1|436599_436833_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085783698.1|436836_437391_-	hypothetical protein	NA	D4HTZ6	Vibrio_phage	27.9	1.3e-07
WP_085783699.1|437394_437817_-	cell wall hydrolase	NA	A0A1B0VMI2	Pseudomonas_phage	42.1	6.6e-20
WP_085783700.1|437832_438357_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085783701.1|438374_439259_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085783702.1|439267_441016_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157111114.1|441139_442141_+	EamA family transporter	NA	NA	NA	NA	NA
WP_085783704.1|442165_442690_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157111115.1|442692_442860_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085783705.1|442885_443284_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085783706.1|443276_443651_-|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
WP_085783707.1|443679_444303_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085783708.1|444358_445570_-|capsid	phage major capsid protein	capsid	B0VK33	Azospirillum_phage	46.9	6.0e-74
WP_085783709.1|445594_446137_-|head,protease	HK97 family phage prohead protease	head,protease	B0VK32	Azospirillum_phage	47.2	5.8e-29
WP_085785047.1|446133_447345_-|portal	phage portal protein	portal	W8ECU7	Geobacillus_phage	44.6	4.9e-84
>prophage 2
NZ_CP008743	Candidatus Nucleicultrix amoebiphila FS5, complete genome	1838212	796606	860206	1838212	protease,plate,transposase	Planktothrix_phage(16.67%)	59	NA	NA
WP_085784057.1|796606_798406_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_085784058.1|798369_799404_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_085784059.1|799662_800493_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	39.4	7.6e-20
WP_085784060.1|800486_801125_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_085784061.1|801134_801929_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157111137.1|801935_802982_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_085784063.1|803107_804049_-	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	44.8	7.7e-69
WP_085784064.1|804064_804634_-	TlpA family protein disulfide reductase	NA	NA	NA	NA	NA
WP_085784065.1|804852_805545_-|protease	TIGR02281 family clan AA aspartic protease	protease	NA	NA	NA	NA
WP_085784066.1|805541_806027_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085784067.1|806095_806914_-	OmpA family protein	NA	NA	NA	NA	NA
WP_085784068.1|807292_808543_-	RsmB/NOP family class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA	NA
WP_085784069.1|808539_809235_-	RlmE family RNA methyltransferase	NA	Q8JM43	Mamestra_configurata_nucleopolyhedrovirus	27.0	4.3e-08
WP_085784070.1|809231_810275_-	Ppx/GppA family phosphatase	NA	NA	NA	NA	NA
WP_085784071.1|810701_812033_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	NA	NA	NA	NA
WP_085784072.1|812368_813079_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_085784073.1|813146_814778_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157111138.1|815234_816590_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085784075.1|816875_817904_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_085784076.1|817900_818626_+	metal ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	30.8	7.6e-16
WP_085784077.1|818625_819414_+	iron chelate uptake ABC transporter family permease subunit	NA	NA	NA	NA	NA
WP_085785057.1|820399_820978_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
WP_085784078.1|820974_821784_+	TIGR00282 family metallophosphoesterase	NA	NA	NA	NA	NA
WP_085784079.1|821874_822171_+	ETC complex I subunit	NA	NA	NA	NA	NA
WP_085784080.1|822180_822585_-	DUF2000 domain-containing protein	NA	NA	NA	NA	NA
WP_085784081.1|822581_823559_-	glycosyltransferase family 9 protein	NA	NA	NA	NA	NA
WP_085784082.1|823555_824701_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_085784083.1|824839_826123_+	efflux RND transporter periplasmic adaptor subunit	NA	S5VL44	Leptospira_phage	27.9	9.3e-17
WP_085784084.1|826168_829279_+	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	24.5	6.2e-83
WP_085784085.1|829296_830082_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_157111139.1|830104_830995_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085784087.1|830991_831801_+	MOSC domain-containing protein	NA	NA	NA	NA	NA
WP_085784088.1|831821_832748_+	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_085784089.1|832744_833413_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_085785058.1|833494_834292_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
WP_085784090.1|834309_835044_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085784091.1|835224_836586_-	S8/S53 family peptidase	NA	NA	NA	NA	NA
WP_085784092.1|836698_837679_+|protease	trypsin-like serine protease	protease	NA	NA	NA	NA
WP_157111140.1|837759_838062_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085784094.1|838197_840237_-	excinuclease ABC subunit UvrB	NA	A7WKN6	Acidianus_filamentous_virus	36.7	4.0e-06
WP_157111199.1|840229_841858_-	dipeptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.3	6.7e-20
WP_085784096.1|841860_842895_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_085784097.1|842895_844002_-	microcin C ABC transporter permease YejB	NA	NA	NA	NA	NA
WP_085784098.1|844008_845841_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_085785059.1|845850_846363_-	cytochrome c family protein	NA	NA	NA	NA	NA
WP_085784099.1|846477_847887_-	DNA recombination protein RmuC	NA	NA	NA	NA	NA
WP_085784100.1|847995_849258_+	nucleoside:proton symporter	NA	NA	NA	NA	NA
WP_085784101.1|849244_849736_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_085784102.1|849732_850587_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157111141.1|850583_851162_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_085784103.1|851347_852517_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085784104.1|852623_853214_-	recombination protein RecR	NA	NA	NA	NA	NA
WP_085784105.1|853229_853553_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_085784106.1|853578_854892_-	DNA polymerase III subunit gamma/tau	NA	E7DN81	Pneumococcus_phage	38.8	3.5e-43
WP_085785061.1|855215_855668_+	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA	NA
WP_085785062.1|855672_856548_-	RNA polymerase sigma factor RpoH	NA	M4SMP8	Cyanophage	31.0	4.0e-19
WP_085784107.1|856645_857611_-	RluA family pseudouridine synthase	NA	A0A2H4UV25	Bodo_saltans_virus	24.6	1.9e-06
WP_085784108.1|857674_859300_-	Do family serine endopeptidase	NA	A0A1B1IT49	uncultured_Mediterranean_phage	27.4	5.1e-20
WP_085784109.1|859342_860206_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
>prophage 3
NZ_CP008743	Candidatus Nucleicultrix amoebiphila FS5, complete genome	1838212	1073675	1080337	1838212		Acinetobacter_phage(16.67%)	8	NA	NA
WP_085784298.1|1073675_1075472_+	aminopeptidase P family protein	NA	A0A0P0I8D7	Acinetobacter_phage	36.1	4.2e-100
WP_085784299.1|1075468_1076653_-	UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase	NA	NA	NA	NA	NA
WP_085784300.1|1076764_1077067_+	type II toxin-antitoxin system HigB family toxin	NA	A0A0P0ZE17	Stx2-converting_phage	48.4	1.2e-18
WP_085784301.1|1077056_1077461_+	hypothetical protein	NA	A0A222YXG1	Escherichia_phage	47.5	1.8e-19
WP_085784302.1|1077560_1077887_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	Q332J9	Clostridium_botulinum_C_phage	28.7	6.0e-05
WP_085784303.1|1077880_1078132_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085784304.1|1078382_1078694_+	HigA family addiction module antidote protein	NA	A0A0M3LPV0	Mannheimia_phage	35.7	1.0e-06
WP_085784305.1|1078690_1080337_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	26.8	7.7e-40
>prophage 4
NZ_CP008743	Candidatus Nucleicultrix amoebiphila FS5, complete genome	1838212	1807354	1815240	1838212		Bacillus_phage(50.0%)	8	NA	NA
WP_085785000.1|1807354_1808497_+	polyamine ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.3	1.1e-29
WP_085785001.1|1808500_1809430_+	ABC transporter permease subunit	NA	Q6GZ02	Mycoplasma_phage	27.9	3.2e-11
WP_085785002.1|1809433_1810255_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_085785003.1|1810260_1811109_+	ATPase	NA	A0A222YXS3	Escherichia_phage	28.5	4.1e-05
WP_085785004.1|1811121_1811550_+	DnaJ domain-containing protein	NA	NA	NA	NA	NA
WP_085785005.1|1811611_1812517_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	44.4	6.1e-63
WP_085785006.1|1812517_1813861_+	UDP-glucose/GDP-mannose dehydrogenase family protein	NA	A0A127AXI2	Bacillus_phage	41.7	4.2e-84
WP_085785007.1|1813863_1815240_+	phosphomannomutase/phosphoglucomutase	NA	A0A127AWJ1	Bacillus_phage	33.0	1.3e-56
