The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP016797	Lactobacillus brevis strain TMW 1.2112 chromosome, complete genome	2488939	873044	926280	2488939	tail,terminase,protease,plate,capsid,transposase,integrase	Lactobacillus_phage(83.67%)	73	868683:868701	876915:876933
868683:868701	attL	GAGTTTTTTAATTAGTTTA	NA	NA	NA	NA
WP_191981936.1|873044_874244_-|integrase	site-specific integrase	integrase	D6PSS4	Lactobacillus_phage	64.1	1.3e-142
WP_085763003.1|874675_875557_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	Q4ZE81	Staphylococcus_phage	36.6	4.1e-16
WP_085763004.1|875675_876059_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085763005.1|876112_876436_-	hypothetical protein	NA	NA	NA	NA	NA
WP_155275714.1|876546_876717_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052415627.1|876728_877364_-	DUF4145 domain-containing protein	NA	A0A1X9I6S1	Streptococcus_phage	33.2	8.7e-24
876915:876933	attR	GAGTTTTTTAATTAGTTTA	NA	NA	NA	NA
WP_085763729.1|877374_877761_-	ImmA/IrrE family metallo-endopeptidase	NA	D6PSS8	Lactobacillus_phage	94.5	1.3e-67
WP_085763006.1|877789_878170_-	helix-turn-helix domain-containing protein	NA	D6PSS9	Lactobacillus_phage	53.1	1.3e-22
WP_047021620.1|878310_878538_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_085763007.1|878807_878993_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085763008.1|878981_879230_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157128259.1|879386_879551_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085763009.1|879611_880121_+	helix-turn-helix domain-containing protein	NA	D6PST4	Lactobacillus_phage	53.8	1.3e-41
WP_085763010.1|880125_880401_+	hypothetical protein	NA	D6PST5	Lactobacillus_phage	60.9	9.8e-25
WP_157128260.1|880406_880565_+	hypothetical protein	NA	D6PST6	Lactobacillus_phage	78.8	3.3e-17
WP_085763011.1|880674_880989_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085763012.1|880988_881876_+	YqaJ viral recombinase family protein	NA	A0A0P0IJW5	Lactobacillus_phage	56.6	1.7e-94
WP_085763013.1|881878_882832_+	recombinase RecT	NA	D2IYT9	Enterococcus_phage	56.9	4.9e-79
WP_085763014.1|882860_883802_+	DUF4373 domain-containing protein	NA	A0A0H4TKJ7	Bacillus_phage	35.2	3.8e-15
WP_085763015.1|883798_884500_+	Rha family transcriptional regulator	NA	D2IYT0	Enterococcus_phage	46.6	4.1e-51
WP_085763016.1|884492_884912_+	RusA family crossover junction endodeoxyribonuclease	NA	D6PSU4	Lactobacillus_phage	59.0	9.4e-43
WP_085768350.1|884899_885163_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085763018.1|885332_886136_+	DNA adenine methylase	NA	Q24LC8	Clostridium_phage	43.3	3.2e-63
WP_085763019.1|886238_886436_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024525425.1|886428_886704_+	DUF3850 domain-containing protein	NA	U5U430	Lactobacillus_phage	61.8	2.3e-18
WP_069359856.1|886737_887040_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085763020.1|887069_887390_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085763021.1|887394_887592_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085763022.1|887670_888144_+	hypothetical protein	NA	U5U7A6	Lactobacillus_phage	35.9	3.9e-13
WP_084994700.1|889008_890085_+	hypothetical protein	NA	A0A1S5S8Z0	Streptococcus_phage	34.5	1.6e-06
WP_157128261.1|890143_890320_+	hypothetical protein	NA	NA	NA	NA	NA
WP_035464847.1|890357_890573_-	CsbD family protein	NA	NA	NA	NA	NA
WP_085763023.1|890770_891004_+	hypothetical protein	NA	D6PSW7	Lactobacillus_phage	87.0	1.1e-32
WP_085763024.1|891062_891815_+	TerS	NA	D6PSW8	Lactobacillus_phage	90.3	5.1e-108
WP_085763025.1|891792_893136_+|terminase	PBSX family phage terminase large subunit	terminase	D6PSX1	Lactobacillus_phage	99.6	7.9e-168
WP_085763026.1|893152_894514_+	DUF1073 domain-containing protein	NA	D6PSX2	Lactobacillus_phage	97.8	4.9e-258
WP_085763027.1|894516_895344_+|capsid	minor capsid protein	capsid	D6PSX3	Lactobacillus_phage	96.7	9.0e-130
WP_191981937.1|895366_895636_+	LysM peptidoglycan-binding domain-containing protein	NA	D6PSX4	Lactobacillus_phage	86.5	8.7e-18
WP_085763029.1|895647_896751_+	DUF2213 domain-containing protein	NA	D6PSX5	Lactobacillus_phage	89.6	1.6e-158
WP_042254689.1|896765_897230_+	hypothetical protein	NA	D6PSX6	Lactobacillus_phage	98.7	6.4e-77
WP_085763030.1|897244_898123_+	encapsulin	NA	D6PSX7	Lactobacillus_phage	98.6	6.8e-160
WP_085763031.1|898133_898496_+	hypothetical protein	NA	D6PSX8	Lactobacillus_phage	99.2	8.1e-59
WP_085763032.1|898507_898834_+	DUF4054 domain-containing protein	NA	D6PSX9	Lactobacillus_phage	95.4	3.9e-52
WP_085763033.1|898830_899433_+	hypothetical protein	NA	D6PSY0	Lactobacillus_phage	87.9	1.5e-97
WP_085763034.1|899432_899807_+	hypothetical protein	NA	D6PSY1	Lactobacillus_phage	94.4	5.9e-65
WP_085763035.1|899799_900270_+	hypothetical protein	NA	D6PSY2	Lactobacillus_phage	94.9	4.2e-60
WP_085763036.1|900282_901320_+	DUF3383 family protein	NA	D6PSY3	Lactobacillus_phage	95.1	1.7e-141
WP_085763037.1|901334_901733_+	hypothetical protein	NA	D6PSY4	Lactobacillus_phage	99.2	3.1e-72
WP_085763038.1|901803_902178_+	hypothetical protein	NA	D6PSY5	Lactobacillus_phage	91.1	2.8e-62
WP_157128262.1|902188_902359_+	hypothetical protein	NA	D6PSY6	Lactobacillus_phage	94.4	9.7e-23
WP_085763039.1|902373_908097_+|tail	phage tail tape measure protein	tail	D6PSY9	Lactobacillus_phage	85.2	1.1e-138
WP_085763040.1|908096_908744_+	LysM peptidoglycan-binding domain-containing protein	NA	D6PSZ4	Lactobacillus_phage	92.1	3.4e-108
WP_191981938.1|908755_909148_+	hypothetical protein	NA	D6PSZ5	Lactobacillus_phage	100.0	7.1e-69
WP_085763042.1|909137_910379_+	hypothetical protein	NA	D6PSZ6	Lactobacillus_phage	90.8	1.4e-206
WP_085763043.1|910378_910723_+	hypothetical protein	NA	D6PSZ7	Lactobacillus_phage	97.4	2.5e-57
WP_085763044.1|910722_911121_+	hypothetical protein	NA	D6PSZ8	Lactobacillus_phage	80.2	5.8e-50
WP_085763045.1|911107_911875_+|plate	baseplate J/gp47 family protein	plate	D6PSZ9	Lactobacillus_phage	81.0	1.4e-89
WP_157128263.1|911775_912285_+	hypothetical protein	NA	D6PSZ9	Lactobacillus_phage	79.9	1.1e-72
WP_085763047.1|912274_912934_+	hypothetical protein	NA	D6PT00	Lactobacillus_phage	82.4	2.8e-73
WP_085763048.1|912936_914832_+	hypothetical protein	NA	A0A2K9VCK7	Lactobacillus_phage	58.6	3.6e-41
WP_085763049.1|914843_915272_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157128264.1|915283_915451_+	XkdX family protein	NA	NA	NA	NA	NA
WP_191982493.1|915476_916280_+	hypothetical protein	NA	D6PSR9	Lactobacillus_phage	67.2	2.8e-43
WP_085763051.1|916291_916810_+	hypothetical protein	NA	D6PSS1	Lactobacillus_phage	93.0	8.2e-81
WP_085763076.1|916809_917862_+	Lyzozyme M1 (1,4-beta-N-acetylmuramidase)	NA	D6PSS2	Lactobacillus_phage	97.2	2.5e-177
WP_157128265.1|917940_918738_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085763053.1|918745_919879_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A0U4JD08	Gordonia_phage	26.4	3.5e-23
WP_085763054.1|920285_920492_-	DUF3923 family protein	NA	NA	NA	NA	NA
WP_042521251.1|920664_921042_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_085762957.1|921459_922635_-|transposase	IS256 family transposase	transposase	NA	NA	NA	NA
WP_085768351.1|923030_924212_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_043023458.1|924989_925457_-	universal stress protein	NA	NA	NA	NA	NA
WP_085763077.1|925710_926280_-|protease	matrixin family metalloprotease	protease	NA	NA	NA	NA
>prophage 2
NZ_CP016797	Lactobacillus brevis strain TMW 1.2112 chromosome, complete genome	2488939	1694554	1700782	2488939	integrase	Staphylococcus_phage(16.67%)	9	1685211:1685229	1708965:1708983
1685211:1685229	attL	CAAAGAAGACTTGCGGACC	NA	NA	NA	NA
WP_085763353.1|1694554_1695955_-	virulence protein	NA	Q4ZD27	Staphylococcus_phage	37.1	5.3e-74
WP_085763354.1|1695967_1696738_-	bifunctional DNA primase/polymerase	NA	A0A060ADS5	Enterococcus_phage	31.7	2.1e-16
WP_085763355.1|1696750_1696975_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085763356.1|1696974_1697205_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085763357.1|1697516_1697801_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085763358.1|1697817_1698498_-	Rha family transcriptional regulator	NA	R9QNB1	Lactococcus_phage	36.0	4.5e-26
WP_085763359.1|1698499_1698715_-	helix-turn-helix transcriptional regulator	NA	A0A1X9I5U5	Streptococcus_phage	43.5	3.6e-06
WP_085763360.1|1698843_1699482_+	helix-turn-helix transcriptional regulator	NA	A0A0P0IV68	Lactobacillus_phage	48.8	1.3e-11
WP_085763361.1|1699627_1700782_+|integrase	site-specific integrase	integrase	S6C485	Thermus_phage	36.0	3.3e-53
1708965:1708983	attR	CAAAGAAGACTTGCGGACC	NA	NA	NA	NA
>prophage 1
NZ_CP016798	Lactobacillus brevis strain TMW 1.2112 plasmid pl12112-1, complete sequence	44555	4443	40450	44555	head,terminase,capsid,portal,plate	Lactobacillus_phage(56.25%)	54	NA	NA
WP_085768431.1|4443_5673_-	hypothetical protein	NA	Q20DB8	Lactobacillus_phage	29.7	4.9e-07
WP_085768432.1|5672_6275_-	hypothetical protein	NA	NA	NA	NA	NA
WP_191982498.1|6284_7520_-|plate	baseplate J/gp47 family protein	plate	A8ATI2	Listeria_phage	30.0	1.2e-42
WP_085768434.1|7503_7902_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085768435.1|7898_8312_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085768436.1|8304_9237_-	hypothetical protein	NA	A8ATH9	Listeria_phage	31.6	1.2e-29
WP_085768437.1|9220_9577_-	hypothetical protein	NA	A8ATH8	Listeria_phage	43.6	1.8e-15
WP_085768438.1|9576_10761_-	LysM peptidoglycan-binding domain-containing protein	NA	A8ATH7	Listeria_phage	32.0	8.1e-07
WP_191982499.1|10760_14621_-	C40 family peptidase	NA	A0A2P0ZLG0	Lactobacillus_phage	34.2	9.6e-142
WP_042253738.1|14620_14818_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085768440.1|14879_15509_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085768441.1|15958_16459_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085768442.1|16473_17562_-	hypothetical protein	NA	D6PSY3	Lactobacillus_phage	24.1	1.1e-05
WP_085768443.1|17565_18051_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157128293.1|18043_18382_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085768445.1|18417_18738_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157128295.1|18742_19345_-	hypothetical protein	NA	A0A2D1GQ83	Lysinibacillus_phage	28.6	2.2e-05
WP_085768447.1|19337_19682_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085768448.1|19696_20773_-|capsid	phage capsid protein	capsid	O03966	Lactobacillus_phage	42.6	3.0e-53
WP_085768449.1|20785_21424_-	DUF4355 domain-containing protein	NA	NA	NA	NA	NA
WP_085768480.1|21636_22344_-|head	phage head morphogenesis protein	head	NA	NA	NA	NA
WP_191982494.1|22492_24280_-|portal	phage portal protein	portal	C9E2I8	Enterococcus_phage	28.0	7.8e-46
WP_085768451.1|24236_24581_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085768452.1|24753_26064_-|terminase	PBSX family phage terminase large subunit	terminase	D2IYW1	Enterococcus_phage	51.3	1.1e-110
WP_085768453.1|26060_26660_-|terminase	terminase small subunit	terminase	A0A1P8VVN7	Streptococcus_phage	46.2	2.0e-09
WP_191982495.1|26659_26815_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085768454.1|27358_27775_-	transcriptional regulator	NA	E9LUP5	Lactobacillus_phage	48.2	1.5e-32
WP_085768455.1|27787_28003_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042253713.1|28139_28439_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085768456.1|28467_28659_-	hypothetical protein	NA	D6PSV7	Lactobacillus_phage	95.2	8.6e-28
WP_085768457.1|28639_29068_-	hypothetical protein	NA	K4I239	Lactobacillus_phage	41.4	1.2e-13
WP_191982500.1|29027_29216_-	hypothetical protein	NA	D6PSV4	Lactobacillus_phage	88.7	4.2e-27
WP_085768458.1|29199_29397_-	hypothetical protein	NA	D6PSV3	Lactobacillus_phage	78.5	4.7e-21
WP_191982496.1|29465_29621_-	hypothetical protein	NA	D6PSV2	Lactobacillus_phage	100.0	1.5e-22
WP_085768459.1|30442_30688_-	hypothetical protein	NA	D6PSU9	Lactobacillus_phage	86.4	3.1e-30
WP_085768460.1|30687_31092_-	hypothetical protein	NA	D6PSU8	Lactobacillus_phage	71.4	8.8e-30
WP_085768461.1|31261_32032_-	ATP-binding protein	NA	E9LUN6	Lactobacillus_phage	52.1	7.7e-67
WP_157128297.1|32033_32789_-	conserved phage C-terminal domain-containing protein	NA	A0A1W6JNI1	Staphylococcus_phage	49.4	3.9e-55
WP_085768462.1|32818_33622_-	HNH endonuclease	NA	H2EFU0	Moumouvirus	36.1	3.4e-17
WP_085768463.1|33584_34310_-	hypothetical protein	NA	E9LUU3	Lactobacillus_phage	63.0	3.5e-77
WP_085768464.1|34324_34756_-	single-stranded DNA-binding protein	NA	A0A2D1GPB7	Lactobacillus_phage	62.1	4.6e-45
WP_085768465.1|34748_35492_-	ERF family protein	NA	Q9G0C9	Lactococcus_phage	42.3	1.9e-14
WP_085768466.1|35494_36037_-	host-nuclease inhibitor Gam family protein	NA	E9LUU0	Lactobacillus_phage	40.7	9.0e-30
WP_085768467.1|36036_36351_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085768468.1|36460_36664_-	hypothetical protein	NA	E9LUT7	Lactobacillus_phage	45.5	1.4e-07
WP_191982497.1|36653_36818_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047021375.1|36932_37169_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081082598.1|37216_37402_+	YjzC family protein	NA	A0A0A7RTS6	Clostridium_phage	49.1	2.0e-05
WP_085768470.1|37665_37899_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157128298.1|37895_38042_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085768471.1|38358_38562_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085768472.1|38574_39297_-	phage antirepressor KilAC domain-containing protein	NA	A0A2I7SC24	Paenibacillus_phage	45.9	2.9e-52
WP_085768473.1|39312_39564_-	helix-turn-helix transcriptional regulator	NA	U5U3X7	Lactobacillus_phage	55.6	4.3e-19
WP_085768474.1|39724_40450_+	helix-turn-helix domain-containing protein	NA	A0A097BY95	Leuconostoc_phage	47.9	1.8e-49
>prophage 1
NZ_CP016802	Lactobacillus brevis strain TMW 1.2112 plasmid pl12112-5, complete sequence	59682	0	13813	59682	transposase	Staphylococcus_prophage(50.0%)	8	NA	NA
WP_020090532.1|743_1112_+	DUF5388 domain-containing protein	NA	NA	NA	NA	NA
WP_051998327.1|3792_4350_+	hypothetical protein	NA	NA	NA	NA	NA
WP_103152830.1|5610_6987_-	Nramp family divalent metal transporter	NA	NA	NA	NA	NA
WP_085768485.1|7234_7879_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_191982502.1|8691_9240_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_085768487.1|9404_10664_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_046870788.1|11481_12399_-|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	38.1	5.6e-40
WP_011178833.1|12865_13813_+	glycosyltransferase family 2 protein	NA	I1TED8	Salmonella_phage	36.9	2.7e-45
>prophage 2
NZ_CP016802	Lactobacillus brevis strain TMW 1.2112 plasmid pl12112-5, complete sequence	59682	24878	32267	59682	transposase	unidentified_phage(40.0%)	5	NA	NA
WP_085763761.1|24878_25802_-|transposase	IS30 family transposase	transposase	H7BUM7	unidentified_phage	31.4	1.1e-30
WP_033615067.1|26130_26685_-	recombinase family protein	NA	A0A1J1J8Z4	Escherichia_phage	45.1	6.8e-33
WP_085763762.1|27060_29097_-	KUP/HAK/KT family potassium transporter	NA	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	33.2	1.0e-62
WP_085763763.1|29262_29964_-	response regulator transcription factor	NA	A0A1J0GWE0	Alteromonas_phage	29.1	4.8e-07
WP_085763764.1|31337_32267_+|transposase	IS30 family transposase	transposase	H7BW47	unidentified_phage	33.7	4.8e-23
>prophage 3
NZ_CP016802	Lactobacillus brevis strain TMW 1.2112 plasmid pl12112-5, complete sequence	59682	42006	44142	59682		Streptococcus_phage(100.0%)	1	NA	NA
WP_085763773.1|42006_44142_-	type IA DNA topoisomerase	NA	A0A1X9I6W8	Streptococcus_phage	46.0	5.6e-107
>prophage 4
NZ_CP016802	Lactobacillus brevis strain TMW 1.2112 plasmid pl12112-5, complete sequence	59682	48842	49997	59682		Staphylococcus_phage(100.0%)	1	NA	NA
WP_085768494.1|48842_49997_-	C40 family peptidase	NA	A0A1X9I9Q1	Staphylococcus_phage	39.6	1.6e-15
