assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002142675.1_ASM214267v1	NZ_CP021202	Escherichia coli strain Z1002 chromosome, complete genome	1	1232156-1232305	1	CRISPRCasFinder	no		csa3,cas3,WYL,DEDDh,c2c9_V-U4,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	Orphan	CGCGTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCA	54	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,DEDDh,c2c9_V-U4,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,cas14j	NA|532aa|up_6|NZ_CP021202.1_1223462_1225058_+,NA	NA|238aa|up_9|NZ_CP021202.1_1221365_1222079_-	PRK12742, PRK12742, SDR family oxidoreductase	NA|198aa|up_8|NZ_CP021202.1_1222149_1222743_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|151aa|up_7|NZ_CP021202.1_1222887_1223340_+	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|532aa|up_6|NZ_CP021202.1_1223462_1225058_+	NA	NA|335aa|up_5|NZ_CP021202.1_1225113_1226118_-	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|139aa|up_4|NZ_CP021202.1_1226279_1226696_+	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|168aa|up_3|NZ_CP021202.1_1226741_1227245_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|399aa|up_2|NZ_CP021202.1_1227437_1228634_+	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|952aa|up_1|NZ_CP021202.1_1228689_1231545_-	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|148aa|up_0|NZ_CP021202.1_1231544_1231988_-	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|504aa|down_0|NZ_CP021202.1_1232341_1233853_-	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|367aa|down_1|NZ_CP021202.1_1234119_1235220_+	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|361aa|down_2|NZ_CP021202.1_1235219_1236302_+	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|501aa|down_3|NZ_CP021202.1_1236462_1237965_-	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|333aa|down_4|NZ_CP021202.1_1238042_1239041_-	cd01575, PBP1_GntR, ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators	NA|440aa|down_5|NZ_CP021202.1_1239107_1240427_-	TIGR00791, Gluconate_permease, gluconate transporter	NA|255aa|down_6|NZ_CP021202.1_1240489_1241254_-	PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional	NA|344aa|down_7|NZ_CP021202.1_1241277_1242309_-	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional	NA|188aa|down_8|NZ_CP021202.1_1242525_1243089_+	PRK09825, idnK, gluconokinase	NA|340aa|down_9|NZ_CP021202.1_1243092_1244112_-	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)
GCF_002142675.1_ASM214267v1	NZ_CP021202	Escherichia coli strain Z1002 chromosome, complete genome	2	4572216-4572793	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	csa3,cas3,WYL,DEDDh,c2c9_V-U4,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	Type I-E	CGATTTATCCCCGCTGGCGCGGGGAACAC,TTTATCCCCGCTGGCGCGGGGAACAC,TTTATCCCCGCTGGCGCGGGGAACAC	29,26,26	0	0	NA	NA	I-E:I-E:I-E	9,9,9	9	TypeI-E	csa3,cas3,WYL,DEDDh,c2c9_V-U4,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,cas14j	NA,NA	NA|254aa|up_9|NZ_CP021202.1_4564028_4564790_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|NZ_CP021202.1_4564770_4565820_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|NZ_CP021202.1_4565816_4566296_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|NZ_CP021202.1_4566295_4567006_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|NZ_CP021202.1_4567024_4567336_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|NZ_CP021202.1_4567529_4567853_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|NZ_CP021202.1_4567902_4568508_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|476aa|up_2|NZ_CP021202.1_4568507_4569935_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|NZ_CP021202.1_4569936_4570845_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|346aa|up_0|NZ_CP021202.1_4571096_4572134_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	cas2|98aa|down_0|NZ_CP021202.1_4572889_4573183_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|308aa|down_1|NZ_CP021202.1_4573179_4574103_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|217aa|down_2|NZ_CP021202.1_4574099_4574750_-	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas5|249aa|down_3|NZ_CP021202.1_4574731_4575478_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|352aa|down_4|NZ_CP021202.1_4575488_4576544_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|179aa|down_5|NZ_CP021202.1_4576558_4577095_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|521aa|down_6|NZ_CP021202.1_4577091_4578654_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|900aa|down_7|NZ_CP021202.1_4578751_4581451_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|51aa|down_8|NZ_CP021202.1_4581645_4581798_-	pfam01848, HOK_GEF, Hok/gef family	NA|245aa|down_9|NZ_CP021202.1_4582062_4582797_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase
GCF_002142675.1_ASM214267v1	NZ_CP021202	Escherichia coli strain Z1002 chromosome, complete genome	3	4599931-4600569	3,2,2	CRISPRCasFinder,CRT,PILER-CR	no		csa3,cas3,WYL,DEDDh,c2c9_V-U4,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	Orphan	CGGTTTATCCCCGCTGGCGCGGGGAACTC,CGGTTTATCCCCGCTGGCGCGGGGAACTC,CGGTTTATCCCCGCTGGCGCGGGGAACTC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	10,10,9	10	Orphan	csa3,cas3,WYL,DEDDh,c2c9_V-U4,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,cas14j	NA,NA	NA|87aa|up_9|NZ_CP021202.1_4588402_4588663_+	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|192aa|up_8|NZ_CP021202.1_4588679_4589255_+	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|450aa|up_7|NZ_CP021202.1_4589389_4590738_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|287aa|up_6|NZ_CP021202.1_4590837_4591698_-	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|260aa|up_5|NZ_CP021202.1_4591694_4592474_-	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|470aa|up_4|NZ_CP021202.1_4592451_4593861_-	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|485aa|up_3|NZ_CP021202.1_4593882_4595337_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|262aa|up_2|NZ_CP021202.1_4595406_4596192_-	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|426aa|up_1|NZ_CP021202.1_4596510_4597788_+	cd06174, MFS, Major Facilitator Superfamily	NA|493aa|up_0|NZ_CP021202.1_4597814_4599293_+	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|224aa|down_0|NZ_CP021202.1_4600907_4601579_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|291aa|down_1|NZ_CP021202.1_4601872_4602745_+	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|153aa|down_2|NZ_CP021202.1_4602863_4603322_-	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|433aa|down_3|NZ_CP021202.1_4603514_4604813_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_4|NZ_CP021202.1_4604899_4606537_-	PRK05380, pyrG, CTP synthetase; Validated	NA|264aa|down_5|NZ_CP021202.1_4606764_4607556_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|112aa|down_6|NZ_CP021202.1_4607627_4607963_-	PRK09907, PRK09907, endoribonuclease MazF	NA|83aa|down_7|NZ_CP021202.1_4607962_4608211_-	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|745aa|down_8|NZ_CP021202.1_4608288_4610523_-	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|434aa|down_9|NZ_CP021202.1_4610570_4611872_-	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
