The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP021323	Kushneria konosiri strain X49 chromosome, complete genome	3584631	21562	50233	3584631	protease,head,tail,capsid,portal,terminase	Pseudomonas_phage(40.0%)	45	NA	NA
WP_086620202.1|21562_24286_-	hypothetical protein	NA	A0A0H5ART3	Pseudomonas_phage	48.1	3.0e-238
WP_086620203.1|24242_24674_-	hypothetical protein	NA	B5WZT7	Pseudomonas_phage	41.2	2.5e-22
WP_086620204.1|24683_25178_-	DUF1833 family protein	NA	A0A2H4J983	uncultured_Caudovirales_phage	36.9	1.5e-26
WP_086620205.1|25167_25665_-	hypothetical protein	NA	B5WZT5	Pseudomonas_phage	51.9	1.5e-31
WP_086620206.1|25664_28127_-	hypothetical protein	NA	A0A2H4PI09	Pseudomonas_phage	28.1	2.5e-66
WP_086620207.1|28139_28403_-	hypothetical protein	NA	A0A0U4J8S9	Pseudomonas_phage	67.4	2.0e-27
WP_086620208.1|28435_28795_-|tail	phage tail assembly chaperone family protein, TAC	tail	K7PJU9	Enterobacteria_phage	61.1	1.6e-30
WP_086620209.1|28791_29295_-|tail	phage tail protein	tail	A0A2H4PI27	Pseudomonas_phage	58.3	5.6e-50
WP_086620210.1|29369_29735_-	DUF3168 domain-containing protein	NA	Q9MCA6	Pseudomonas_phage	62.0	2.9e-40
WP_086620211.1|29734_30223_-	HK97 gp10 family phage protein	NA	A0A2H4PI54	Pseudomonas_phage	56.6	2.4e-42
WP_086620212.1|30215_30548_-|head	phage head closure protein	head	A0A1J0GUY4	Halomonas_phage	69.1	1.1e-38
WP_148663889.1|30556_30823_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086620214.1|30883_31210_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A1J0GUX7	Halomonas_phage	60.0	3.6e-26
WP_086620215.1|31273_31675_-	Rho termination factor N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_086623182.1|31737_32958_-|capsid	phage major capsid protein	capsid	M4QRD3	Tetraselmis_viridis_virus	50.6	4.9e-100
WP_086620216.1|33006_33705_-|head,protease	HK97 family phage prohead protease	head,protease	Q6JIM8	Burkholderia_virus	58.6	2.6e-61
WP_086620217.1|33694_34969_-|portal	phage portal protein	portal	Q6JIM9	Burkholderia_virus	49.6	5.6e-115
WP_086620218.1|34968_36687_-|terminase	terminase large subunit	terminase	U5P0Q5	Shigella_phage	53.6	1.0e-175
WP_086620219.1|36693_37173_-|terminase	phage terminase small subunit P27 family	terminase	A0A0R6PIJ3	Moraxella_phage	48.3	4.1e-34
WP_086620220.1|37328_37685_-	HNH endonuclease	NA	A0A1V0E8A5	Vibrio_phage	47.1	8.6e-21
WP_158521402.1|37684_38152_-	hypothetical protein	NA	A0A2I7R6R1	Vibrio_phage	33.1	7.8e-14
WP_158521403.1|38154_38412_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086620223.1|38585_38930_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086620224.1|38939_39257_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086623183.1|39253_39769_-	lysozyme	NA	A0A0S2SYD0	Pseudomonas_phage	62.7	5.7e-42
WP_148663890.1|40008_40611_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158521404.1|40607_40985_-	RusA family crossover junction endodeoxyribonuclease	NA	A0A1J0GV15	Halomonas_phage	50.0	1.2e-20
WP_086620227.1|40981_41263_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086620228.1|41259_41604_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086620229.1|41600_42335_-	hypothetical protein	NA	A0A1B0VMD9	Pseudomonas_phage	46.6	7.7e-32
WP_086620230.1|42337_43237_-	helix-turn-helix domain-containing protein	NA	Q8HA96	Salmonella_phage	61.3	8.2e-36
WP_086620231.1|43233_43530_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086623184.1|43607_43817_-	helix-turn-helix domain-containing protein	NA	A0A0R6PJ81	Moraxella_phage	50.8	1.0e-05
WP_158521405.1|43953_44592_+	helix-turn-helix domain-containing protein	NA	U5P0T5	Shigella_phage	41.9	2.0e-28
WP_086620233.1|44761_45136_+	hypothetical protein	NA	A0A1W6JTA9	Pseudomonas_phage	40.7	2.5e-07
WP_086620234.1|45414_45606_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086620235.1|45602_45815_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086620236.1|45816_46011_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086620237.1|46082_47132_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086620238.1|47137_47338_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086620239.1|47341_47617_+	hypothetical protein	NA	A0A125RNA7	Pseudomonas_phage	48.1	7.8e-06
WP_158521406.1|47613_47769_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086620240.1|47962_48724_+	hypothetical protein	NA	A0A219YFC7	Ochrobactrum_phage	52.2	1.3e-55
WP_086623185.1|48723_49683_+	recombination-associated protein RdgC	NA	A0A1J0GUV6	Halomonas_phage	45.9	1.3e-71
WP_158521407.1|49663_50233_+	HNH endonuclease	NA	A0A0P0IK76	Escherichia_phage	36.2	4.0e-20
>prophage 2
NZ_CP021323	Kushneria konosiri strain X49 chromosome, complete genome	3584631	152461	210404	3584631	protease,tRNA	Bacillus_virus(12.5%)	51	NA	NA
WP_086620316.1|152461_153364_+|protease	protease HtpX	protease	NA	NA	NA	NA
WP_086620317.1|153577_154144_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_086620318.1|154140_155301_+	MFS transporter	NA	NA	NA	NA	NA
WP_086620319.1|155403_156555_-	4-phosphoerythronate dehydrogenase PdxB	NA	NA	NA	NA	NA
WP_086620320.1|156730_157012_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086620321.1|157008_159222_-	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	NA	NA	NA	NA
WP_086620322.1|159426_159636_+	ribosome modulation factor	NA	NA	NA	NA	NA
WP_086620323.1|159705_160746_-	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_148663895.1|160810_161953_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158521411.1|162067_162892_-	MOSC N-terminal beta barrel domain-containing protein	NA	NA	NA	NA	NA
WP_086620326.1|163007_167852_-	NAD-glutamate dehydrogenase	NA	NA	NA	NA	NA
WP_086623200.1|168046_169168_-|tRNA	tRNA (uridine(54)-C5)-methyltransferase TrmA	tRNA	NA	NA	NA	NA
WP_158521412.1|169415_170000_+	DsrE family protein	NA	NA	NA	NA	NA
WP_086620328.1|170114_170666_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086620329.1|170860_172210_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	39.7	6.5e-77
WP_169712231.1|172268_172922_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_086620331.1|174656_176837_-	DNA translocase FtsK	NA	NA	NA	NA	NA
WP_158521413.1|177021_178965_-	Cache 3/Cache 2 fusion domain-containing protein	NA	NA	NA	NA	NA
WP_086620333.1|179127_179817_+|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
WP_086620334.1|179863_180628_+	arginyltransferase	NA	NA	NA	NA	NA
WP_007111068.1|180781_181000_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_086620335.1|181184_183461_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.7	4.8e-165
WP_086620336.1|183491_183887_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	44.4	1.8e-11
WP_086620337.1|184140_185403_-	NADP-dependent isocitrate dehydrogenase	NA	NA	NA	NA	NA
WP_086620338.1|185518_186127_+	pseudouridine synthase	NA	NA	NA	NA	NA
WP_086620339.1|186123_186606_+	NUDIX domain-containing protein	NA	NA	NA	NA	NA
WP_086623201.1|186711_187854_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_086620340.1|187850_188462_+	high frequency lysogenization protein HflD	NA	NA	NA	NA	NA
WP_086620341.1|188536_189913_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	46.0	5.5e-108
WP_086620342.1|189939_191139_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_086620343.1|191141_191573_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_086620344.1|191723_192191_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_086620345.1|192336_193314_+	lipid A deacylase LpxR family protein	NA	NA	NA	NA	NA
WP_158521414.1|193526_194096_+	outer membrane beta-barrel protein	NA	NA	NA	NA	NA
WP_086623202.1|194182_194683_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_158521415.1|194712_195066_-	YqcC family protein	NA	NA	NA	NA	NA
WP_158521416.1|195349_196372_+	DUF3549 family protein	NA	NA	NA	NA	NA
WP_086620349.1|196364_196802_+|protease	ATP-dependent zinc protease	protease	NA	NA	NA	NA
WP_086620350.1|196825_197734_+	30S ribosomal protein S6--L-glutamate ligase	NA	A0A1D8KN85	Synechococcus_phage	32.1	7.5e-37
WP_086620351.1|197896_198340_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086623203.1|198377_199121_-	YdcF family protein	NA	NA	NA	NA	NA
WP_086620352.1|199310_199874_-	putative Fe-S cluster assembly protein SufT	NA	NA	NA	NA	NA
WP_086620353.1|199896_201144_-	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	44.0	3.4e-104
WP_086620354.1|201140_202463_-	Fe-S cluster assembly protein SufD	NA	NA	NA	NA	NA
WP_086620355.1|202459_203212_-	Fe-S cluster assembly ATPase SufC	NA	A0A1M7XV31	Cedratvirus	30.4	1.2e-11
WP_086620356.1|203306_204749_-	Fe-S cluster assembly protein SufB	NA	NA	NA	NA	NA
WP_086620357.1|204828_205296_-	SUF system Fe-S cluster assembly regulator	NA	NA	NA	NA	NA
WP_086620358.1|205472_206768_-	adenylosuccinate synthase	NA	A0A2R8FF47	Brazilian_cedratvirus	36.9	4.9e-74
WP_086620359.1|206824_208009_-	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
WP_086620360.1|208182_209151_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_086620361.1|209150_210404_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
>prophage 3
NZ_CP021323	Kushneria konosiri strain X49 chromosome, complete genome	3584631	2354740	2366083	3584631	tRNA	Cafeteria_roenbergensis_virus(16.67%)	8	NA	NA
WP_086622183.1|2354740_2355601_+	3-deoxy-8-phosphooctulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	41.0	3.6e-49
WP_086622184.1|2355804_2357100_+	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	60.2	8.5e-135
WP_086622185.1|2357688_2358012_-	ferredoxin family protein	NA	NA	NA	NA	NA
WP_086622186.1|2358164_2360711_-	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	21.5	4.4e-26
WP_086622187.1|2360945_2361449_+	CinA family protein	NA	B5TK85	Pseudomonas_phage	54.2	2.2e-30
WP_086622188.1|2361593_2362664_+	recombinase RecA	NA	A0A2D1GPX2	Mycobacterium_phage	61.3	1.2e-113
WP_086622189.1|2362753_2363200_+	regulatory protein RecX	NA	NA	NA	NA	NA
WP_086622190.1|2363476_2366083_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	37.7	1.2e-76
