assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002156845.1_ASM215684v1	NZ_CP021339	Escherichia coli strain 95NR1 chromosome, complete genome	1	3356503-3356836	1,1,1	CRT,PILER-CR,CRISPRCasFinder	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas14i	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	5,4,4	5	TypeI-E	DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas14i	NA,NA	NA|254aa|up_9|NZ_CP021339.1_3348376_3349138_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|NZ_CP021339.1_3349118_3350168_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|NZ_CP021339.1_3350164_3350644_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|NZ_CP021339.1_3350643_3351354_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|NZ_CP021339.1_3351372_3351684_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|NZ_CP021339.1_3351877_3352201_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|NZ_CP021339.1_3352250_3352856_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|476aa|up_2|NZ_CP021339.1_3352855_3354283_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|NZ_CP021339.1_3354284_3355193_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|346aa|up_0|NZ_CP021339.1_3355444_3356482_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	cas2|98aa|down_0|NZ_CP021339.1_3356932_3357226_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|307aa|down_1|NZ_CP021339.1_3357225_3358146_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|217aa|down_2|NZ_CP021339.1_3358142_3358793_-	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas5|249aa|down_3|NZ_CP021339.1_3358774_3359521_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|352aa|down_4|NZ_CP021339.1_3359531_3360587_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|180aa|down_5|NZ_CP021339.1_3360598_3361138_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|521aa|down_6|NZ_CP021339.1_3361134_3362697_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|900aa|down_7|NZ_CP021339.1_3362794_3365494_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|51aa|down_8|NZ_CP021339.1_3365687_3365840_-	pfam01848, HOK_GEF, Hok/gef family	NA|245aa|down_9|NZ_CP021339.1_3366104_3366839_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase
GCF_002156845.1_ASM215684v1	NZ_CP021339	Escherichia coli strain 95NR1 chromosome, complete genome	2	3382538-3382871	2,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas3	DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas14i	Unclear	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAAC,CGGTTTATCCCCGCTGGCGCGGGGAAC	29,27,27	0	0	NA	NA	I-E:I-E:I-E	5,5,5	5	Unclear	DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas14i	NA,NA	NA|424aa|up_9|NZ_CP021339.1_3371182_3372454_+	PRK10015, PRK10015, oxidoreductase; Provisional	NA|87aa|up_8|NZ_CP021339.1_3372444_3372705_+	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|192aa|up_7|NZ_CP021339.1_3372721_3373297_+	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|287aa|up_6|NZ_CP021339.1_3373444_3374305_-	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|260aa|up_5|NZ_CP021339.1_3374301_3375081_-	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|446aa|up_4|NZ_CP021339.1_3375058_3376396_-	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|485aa|up_3|NZ_CP021339.1_3376489_3377944_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|262aa|up_2|NZ_CP021339.1_3378013_3378799_-	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|426aa|up_1|NZ_CP021339.1_3379117_3380395_+	cd06174, MFS, Major Facilitator Superfamily	NA|493aa|up_0|NZ_CP021339.1_3380420_3381899_+	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|224aa|down_0|NZ_CP021339.1_3383210_3383882_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|291aa|down_1|NZ_CP021339.1_3384175_3385048_+	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|433aa|down_2|NZ_CP021339.1_3385107_3386406_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_3|NZ_CP021339.1_3386493_3388131_-	PRK05380, pyrG, CTP synthetase; Validated	NA|264aa|down_4|NZ_CP021339.1_3388358_3389150_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|112aa|down_5|NZ_CP021339.1_3389220_3389556_-	PRK09907, PRK09907, endoribonuclease MazF	NA|83aa|down_6|NZ_CP021339.1_3389555_3389804_-	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|745aa|down_7|NZ_CP021339.1_3389881_3392116_-	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|434aa|down_8|NZ_CP021339.1_3392163_3393465_-	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|919aa|down_9|NZ_CP021339.1_3393521_3396278_+	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional
GCF_002156845.1_ASM215684v1	NZ_CP021340	Escherichia coli strain 95NR1 plasmid p95NR1A, complete sequence	1	1880-1987	1	PILER-CR	no			Orphan	ACAGTCAACATAAAATCGCGTACAGTCAATGTT	33	1	1	1956-1968	NZ_CP021341.1_6350-6362	NA	2	2	Orphan	DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas14i	NA|295aa|up_0|NZ_CP021340.1_919_1804_-,NA|131aa|down_0|NZ_CP021340.1_2137_2530_-,NA|47aa|down_1|NZ_CP021340.1_2541_2682_-,NA|141aa|down_2|NZ_CP021340.1_2707_3130_-,NA|263aa|down_3|NZ_CP021340.1_3169_3958_-,NA|95aa|down_5|NZ_CP021340.1_4420_4705_+,NA|243aa|down_8|NZ_CP021340.1_6954_7683_-,NA|406aa|down_9|NZ_CP021340.1_7686_8904_-	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|295aa|up_0|NZ_CP021340.1_919_1804_-	NA	NA|131aa|down_0|NZ_CP021340.1_2137_2530_-	NA	NA|47aa|down_1|NZ_CP021340.1_2541_2682_-	NA	NA|141aa|down_2|NZ_CP021340.1_2707_3130_-	NA	NA|263aa|down_3|NZ_CP021340.1_3169_3958_-	NA	NA|60aa|down_4|NZ_CP021340.1_3966_4146_-	cd14737, PAAR_1, proline-alanine-alanine-arginine (PAAR) domain	NA|95aa|down_5|NZ_CP021340.1_4420_4705_+	NA	NA|302aa|down_6|NZ_CP021340.1_4697_5603_+	PRK00321, rdgC, recombination associated protein; Reviewed	NA|405aa|down_7|NZ_CP021340.1_5668_6882_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|243aa|down_8|NZ_CP021340.1_6954_7683_-	NA	NA|406aa|down_9|NZ_CP021340.1_7686_8904_-	NA
