The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP015581	Tatumella citrea strain ATCC 39140 chromosome, complete genome	4487195	1405342	1415125	4487195	protease	Planktothrix_phage(16.67%)	8	NA	NA
WP_087490396.1|1405342_1406071_-	arginine ABC transporter ATP-binding protein ArtP	NA	G9BWD6	Planktothrix_phage	36.2	5.4e-30
WP_087487861.1|1406248_1407073_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A0F6R5Z1	Sinorhizobium_phage	29.1	1.4e-10
WP_087490397.1|1407093_1408095_-	low-specificity L-threonine aldolase	NA	NA	NA	NA	NA
WP_087487862.1|1408160_1409882_-	ubiquinone-dependent pyruvate dehydrogenase	NA	G8DDL3	Micromonas_pusilla_virus	23.1	3.9e-26
WP_087487863.1|1410249_1411884_+	DUF2813 domain-containing protein	NA	NA	NA	NA	NA
WP_087487864.1|1411934_1412162_-	cold shock domain-containing protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.7	1.4e-16
WP_038019755.1|1412466_1412790_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	44.9	1.1e-14
WP_087487865.1|1412842_1415125_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.1	1.8e-164
>prophage 2
NZ_CP015581	Tatumella citrea strain ATCC 39140 chromosome, complete genome	4487195	1804346	1814899	4487195	tRNA	Tupanvirus(12.5%)	11	NA	NA
WP_087488181.1|1804346_1806275_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.5	1.4e-125
WP_087488182.1|1806278_1806821_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	31.9	7.4e-16
WP_011146889.1|1806919_1807117_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_038020526.1|1807159_1807516_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_156994596.1|1807639_1807684_+	pheST operon leader peptide PheM	NA	NA	NA	NA	NA
WP_087488184.1|1807832_1808816_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	38.4	2.0e-35
WP_087488185.1|1808830_1811218_+|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	A0A1L3IZU3	BeAn_58058_virus	27.8	2.8e-06
WP_038020529.1|1811222_1811522_+	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	40.0	4.2e-13
WP_087488186.1|1811786_1812248_+	endopeptidase	NA	A0A1V0DZX6	Clostridioides_phage	37.1	3.5e-14
WP_087490431.1|1812396_1813836_+	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	37.5	2.2e-59
WP_087490432.1|1813852_1814899_-	3-deoxy-7-phosphoheptulonate synthase	NA	S4W5F1	Pandoravirus	46.6	3.3e-81
>prophage 3
NZ_CP015581	Tatumella citrea strain ATCC 39140 chromosome, complete genome	4487195	2687012	2731104	4487195	lysis,tail,terminase,head,coat	Cronobacter_phage(32.56%)	60	NA	NA
WP_087488912.1|2687012_2689091_-	hypothetical protein	NA	A0A2H5BN49	Klebsiella_phage	34.5	2.1e-42
WP_087488913.1|2689158_2691636_-|tail	phage tail protein	tail	F1C5A7	Cronobacter_phage	44.4	7.9e-198
WP_087488914.1|2691622_2692018_-	C40 family peptidase	NA	F1C5F2	Cronobacter_phage	52.3	8.0e-36
WP_087488915.1|2692014_2692485_-	hypothetical protein	NA	F1C5F1	Cronobacter_phage	39.2	1.2e-25
WP_087488916.1|2692484_2692958_-	hypothetical protein	NA	F1C5F0	Cronobacter_phage	59.6	1.0e-45
WP_087488917.1|2693015_2693555_-	hypothetical protein	NA	NA	NA	NA	NA
WP_087488918.1|2693554_2696623_-	hypothetical protein	NA	F1C5E9	Cronobacter_phage	38.5	3.5e-86
WP_087488919.1|2696685_2697531_-	hypothetical protein	NA	Q7Y5V4	Haemophilus_phage	55.1	1.5e-52
WP_087488920.1|2697597_2697744_-	Arc family DNA-binding protein	NA	A0A0M4S6R9	Salmonella_phage	68.9	5.6e-11
WP_087488921.1|2697839_2698091_+	Arc family DNA-binding protein	NA	A5VW59	Enterobacteria_phage	74.7	2.4e-25
WP_087488922.1|2698087_2698486_+	hypothetical protein	NA	NA	NA	NA	NA
WP_087490499.1|2698534_2698915_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157665952.1|2699186_2699567_+	hypothetical protein	NA	H6WRU4	Salmonella_phage	34.4	1.3e-11
WP_087488924.1|2699585_2700254_-	hypothetical protein	NA	G0ZNE7	Cronobacter_phage	58.2	5.3e-72
WP_087488925.1|2700307_2701069_-	DNA breaking-rejoining protein	NA	G0ZNE6	Cronobacter_phage	56.8	3.2e-57
WP_087488926.1|2701133_2701523_-	hypothetical protein	NA	F1C5E4	Cronobacter_phage	59.7	2.6e-39
WP_087488927.1|2701519_2701963_-	hypothetical protein	NA	A0A2P1MXA4	Escherichia_phage	50.0	1.5e-30
WP_087488928.1|2701964_2702312_-	hypothetical protein	NA	G0ZNE2	Cronobacter_phage	62.6	8.3e-37
WP_087490500.1|2702308_2702479_-	50S ribosomal protein L13	NA	Q5G8X7	Enterobacteria_phage	46.4	5.9e-12
WP_087488929.1|2702478_2702856_-	hypothetical protein	NA	A0A0M3LQS8	Mannheimia_phage	46.4	3.3e-23
WP_087488930.1|2702858_2703221_-	hypothetical protein	NA	NA	NA	NA	NA
WP_087488931.1|2703230_2704307_-|coat	phage coat protein	coat	F1C5E1	Cronobacter_phage	60.2	2.1e-118
WP_087488932.1|2704317_2704758_-	hypothetical protein	NA	F1C5E0	Cronobacter_phage	66.4	4.0e-44
WP_087488933.1|2704764_2705967_-	DUF2213 domain-containing protein	NA	F1C5D9	Cronobacter_phage	44.7	5.7e-93
WP_087488934.1|2705986_2706898_-|head	phage head morphogenesis protein	head	F1C5D8	Cronobacter_phage	57.2	8.4e-97
WP_087488935.1|2706929_2708312_-	DUF1073 domain-containing protein	NA	F1C5D7	Cronobacter_phage	63.7	4.0e-167
WP_087488936.1|2708395_2709691_-|terminase	terminase	terminase	A0A1V0E5Q3	Salmonella_phage	91.1	5.0e-236
WP_087488937.1|2709674_2710106_-|terminase	terminase small subunit	terminase	A0A1V0E5Q4	Salmonella_phage	79.6	5.8e-56
WP_087488938.1|2710825_2711185_-	hypothetical protein	NA	NA	NA	NA	NA
WP_087488939.1|2711329_2711638_-	hypothetical protein	NA	NA	NA	NA	NA
WP_087488940.1|2711634_2712111_-|lysis	lysis protein	lysis	Q2A095	Sodalis_phage	32.2	1.0e-08
WP_087488941.1|2712107_2712593_-	lysozyme	NA	A0A0M3ULD1	Salmonella_phage	52.7	2.6e-44
WP_087488942.1|2712595_2712847_-|lysis	lysis protein	lysis	NA	NA	NA	NA
WP_087488943.1|2713243_2713900_-	antitermination protein	NA	Q76H66	Enterobacteria_phage	50.2	9.8e-55
WP_087488944.1|2714169_2714745_-	protein NinG	NA	A0A0P0ZG59	Escherichia_phage	42.7	4.2e-33
WP_087488945.1|2714849_2715029_-	NinE family protein	NA	NA	NA	NA	NA
WP_087488947.1|2715227_2715767_-	phage N-6-adenine-methyltransferase	NA	E5AGF8	Erwinia_phage	60.2	4.7e-63
WP_087488948.1|2715776_2716226_-	DUF1367 family protein	NA	A0A2I7RQ46	Vibrio_phage	63.1	1.4e-47
WP_157665954.1|2716931_2717564_-	DUF4755 domain-containing protein	NA	NA	NA	NA	NA
WP_087488952.1|2718938_2719637_-	DNA replication protein	NA	A0A2H4J1B6	uncultured_Caudovirales_phage	54.3	3.8e-65
WP_087488953.1|2719633_2720449_-	replication protein	NA	K7PGT1	Enterobacteria_phage	70.1	6.6e-77
WP_087488954.1|2720448_2721267_-	DNA-binding protein	NA	A0A2H4J902	uncultured_Caudovirales_phage	68.6	6.2e-99
WP_087488955.1|2721301_2721580_-	hypothetical protein	NA	A0A220NRS4	Escherichia_phage	64.1	1.1e-26
WP_087488956.1|2721683_2721899_-	helix-turn-helix domain-containing protein	NA	Q716D6	Shigella_phage	57.7	4.0e-13
WP_087488957.1|2721997_2722639_+	helix-turn-helix domain-containing protein	NA	K7P850	Enterobacteria_phage	63.8	2.2e-75
WP_157665956.1|2723130_2723781_+	type II toxin-antitoxin system MqsA family antitoxin	NA	NA	NA	NA	NA
WP_087488959.1|2723770_2724145_+	hypothetical protein	NA	NA	NA	NA	NA
WP_087488961.1|2725276_2725522_+	hypothetical protein	NA	A0A077KC43	Edwardsiella_phage	50.0	1.6e-05
WP_157665958.1|2725551_2725704_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157665960.1|2725825_2725999_+	DUF551 domain-containing protein	NA	K7PK20	Enterobacteria_phage	41.2	5.4e-05
WP_087490504.1|2726122_2726875_+	methyltransferase	NA	A0A1P8VVC9	Erythrobacter_phage	41.8	6.2e-37
WP_157665962.1|2727352_2727565_+	hypothetical protein	NA	NA	NA	NA	NA
WP_087490505.1|2727564_2728284_+	recombinase	NA	Q76H40	Enterobacteria_phage	57.9	1.2e-74
WP_087488964.1|2728284_2728806_+	single-stranded DNA-binding protein	NA	A0A220NRQ8	Escherichia_phage	77.5	7.0e-56
WP_087488965.1|2728819_2729206_+	hypothetical protein	NA	NA	NA	NA	NA
WP_087490506.1|2729296_2729833_+	hypothetical protein	NA	J9Q748	Salmonella_phage	68.5	1.3e-68
WP_087488966.1|2729829_2730027_+	hypothetical protein	NA	NA	NA	NA	NA
WP_087488967.1|2730023_2730524_+	hypothetical protein	NA	NA	NA	NA	NA
WP_087488968.1|2730523_2730841_+	hypothetical protein	NA	NA	NA	NA	NA
WP_087488969.1|2730840_2731104_+	hypothetical protein	NA	S4TNB5	Salmonella_phage	74.7	2.1e-32
>prophage 4
NZ_CP015581	Tatumella citrea strain ATCC 39140 chromosome, complete genome	4487195	3834588	3899165	4487195	tRNA,integrase,transposase	Staphylococcus_phage(10.0%)	50	3835328:3835342	3853797:3853811
WP_157666013.1|3834588_3835699_+|transposase	IS3 family transposase	transposase	A0A0N9SIX5	Staphylococcus_phage	29.7	6.4e-06
3835328:3835342	attL	GCGGGTCATCAGAGT	NA	NA	NA	NA
WP_087489832.1|3835853_3836330_-	protein kinase	NA	NA	NA	NA	NA
WP_087489833.1|3836322_3838332_-|integrase	integrase	integrase	NA	NA	NA	NA
WP_087489834.1|3838324_3839908_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_087489835.1|3839913_3841086_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_087489836.1|3841306_3841843_-	single-stranded DNA-binding protein	NA	A0A0A0P1Q9	Enterobacteria_phage	90.7	1.6e-50
WP_087489837.1|3842308_3845140_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	55.5	1.0e-310
WP_087489838.1|3845332_3846397_+	NAD(P)-dependent alcohol dehydrogenase	NA	A0A2K9L339	Tupanvirus	45.8	1.1e-82
WP_087489839.1|3846485_3847379_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_087489840.1|3847484_3848480_+	aldo/keto reductase	NA	A0A2I2L334	Orpheovirus	25.6	3.0e-07
WP_087490582.1|3848530_3849454_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_087489841.1|3849558_3849948_+	tautomerase family protein	NA	NA	NA	NA	NA
WP_087489842.1|3850265_3851279_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_087490583.1|3851604_3852813_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_087489843.1|3852843_3853464_-	YitT family protein	NA	NA	NA	NA	NA
WP_087489844.1|3853709_3854192_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
3853797:3853811	attR	ACTCTGATGACCCGC	NA	NA	NA	NA
WP_087489845.1|3854291_3855698_-	replicative DNA helicase	NA	A0A1B0VG30	Salmonella_phage	77.5	1.6e-195
WP_087489846.1|3855808_3856792_+	quinone oxidoreductase	NA	NA	NA	NA	NA
WP_087489847.1|3857000_3857276_-	envelope stress response protein PspG	NA	NA	NA	NA	NA
WP_087489848.1|3857466_3858501_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_087489850.1|3859076_3860030_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_087489851.1|3860174_3860693_+	zinc uptake transcriptional repressor Zur	NA	NA	NA	NA	NA
WP_087489852.1|3860710_3862033_-	MATE family efflux transporter DinF	NA	NA	NA	NA	NA
WP_087489853.1|3862205_3862820_-	repressor LexA	NA	Q9G0C2	Lactococcus_phage	38.9	1.3e-13
WP_087489854.1|3862928_3863294_-	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_087489855.1|3863426_3865856_+	glycerol-3-phosphate 1-O-acyltransferase PlsB	NA	NA	NA	NA	NA
WP_087490584.1|3865929_3866814_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA	NA
WP_087489856.1|3866822_3867350_-	chorismate lyase	NA	NA	NA	NA	NA
WP_087489857.1|3867509_3867935_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA	NA
WP_087489858.1|3868084_3869731_-	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_087489859.1|3869931_3871743_+	sodium:proton antiporter	NA	NA	NA	NA	NA
WP_087489860.1|3872075_3873431_+	lysine-sensitive aspartokinase 3	NA	NA	NA	NA	NA
WP_087489861.1|3873687_3874605_+	ketopantoate/pantoate/pantothenate transporter PanS	NA	NA	NA	NA	NA
WP_087489862.1|3874646_3876272_-	Na/Pi cotransporter family protein	NA	NA	NA	NA	NA
WP_157666015.1|3876273_3876426_-	hypothetical protein	NA	NA	NA	NA	NA
WP_087489863.1|3876436_3877429_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.6	2.8e-29
WP_087489864.1|3877437_3878217_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_087489865.1|3878228_3879074_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_087489866.1|3879070_3879892_-	alkaline phosphatase family protein	NA	NA	NA	NA	NA
WP_087489867.1|3879916_3880978_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_087490585.1|3881228_3881909_+	UTRA domain-containing protein	NA	NA	NA	NA	NA
WP_087489868.1|3881986_3882988_+	L-glyceraldehyde 3-phosphate reductase	NA	NA	NA	NA	NA
WP_087489869.1|3883007_3883937_-	homoserine O-succinyltransferase	NA	NA	NA	NA	NA
WP_087489870.1|3884043_3884895_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	21.5	3.6e-09
WP_087490586.1|3885118_3886237_+	M20 family metallopeptidase	NA	NA	NA	NA	NA
WP_087489871.1|3886253_3887042_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_087487838.1|3887123_3888446_-|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
WP_087489873.1|3894895_3896491_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	49.5	7.7e-69
WP_087489874.1|3896510_3897794_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_087487838.1|3897842_3899165_-|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
