assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002163735.1_ASM216373v1	NZ_CP015883	Enterococcus faecalis strain sorialis chromosome, complete genome	1	1619153-1619716	1,1,1	CRT,PILER-CR,CRISPRCasFinder	no	csn2,cas2,cas9,cas3	WYL,csa3,cas3,cas14j,DinG,csn2,cas2,cas9,DEDDh,RT	Type II-C,Type II-B,Type II-A	GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC,GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC,GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC	36,36,36	0	0	NA	NA	NA:NA:NA	8,7,7	8	TypeII-C,TypeII-B,TypeII-A	WYL,csa3,cas3,cas14j,DinG,csn2,cas2,cas9,DEDDh,RT	NA,NA	NA|321aa|up_9|NZ_CP015883.1_1610315_1611278_+	PRK00558, uvrC, excinuclease ABC subunit UvrC	NA|119aa|up_8|NZ_CP015883.1_1611313_1611670_-	pfam04020, Phage_holin_4_2, Mycobacterial 4 TMS phage holin, superfamily IV	NA|108aa|up_7|NZ_CP015883.1_1611669_1611993_-	pfam04024, PspC, PspC domain	NA|534aa|up_6|NZ_CP015883.1_1612067_1613669_-	COG3595, COG3595, Uncharacterized conserved protein [Function unknown]	NA|226aa|up_5|NZ_CP015883.1_1613876_1614554_-	TIGR02135, Uncharacterized_protein, phosphate transport system regulatory protein PhoU	NA|284aa|up_4|NZ_CP015883.1_1614568_1615420_-	PRK14255, PRK14255, phosphate ABC transporter ATP-binding protein; Provisional	NA|270aa|up_3|NZ_CP015883.1_1615337_1616147_-	PRK14237, PRK14237, phosphate transporter ATP-binding protein; Provisional	NA|295aa|up_2|NZ_CP015883.1_1616163_1617048_-	COG0581, PstA, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]	NA|307aa|up_1|NZ_CP015883.1_1617047_1617968_-	COG0573, PstC, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]	NA|285aa|up_0|NZ_CP015883.1_1618090_1618945_-	TIGR02136, ptsS_2, phosphate binding protein	csn2|353aa|down_0|NZ_CP015883.1_1619793_1620852_-	cd12217, Stu0660_Csn2, Stu0660-like CRISPR/Cas system-associated protein Csn2	cas2|100aa|down_1|NZ_CP015883.1_1620851_1621151_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas9|1151aa|down_2|NZ_CP015883.1_1622297_1625750_-	cd09643, Csn1, CRISPR/Cas system-associated protein Cas9	NA|295aa|down_3|NZ_CP015883.1_1626197_1627082_-	COG2177, FtsX, Cell division protein [Cell division and chromosome partitioning]	NA|229aa|down_4|NZ_CP015883.1_1627074_1627761_-	COG2884, FtsE, Predicted ATPase involved in cell division [Cell division and chromosome partitioning]	NA|367aa|down_5|NZ_CP015883.1_1627866_1628968_-	PRK00578, prfB, peptide chain release factor 2; Validated	NA|846aa|down_6|NZ_CP015883.1_1629044_1631582_-	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed	NA|184aa|down_7|NZ_CP015883.1_1631837_1632389_-	COG1544, COG1544, Ribosome-associated protein Y (PSrp-1) [Translation, ribosomal structure and biogenesis]	NA|229aa|down_8|NZ_CP015883.1_1632527_1633214_-	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only]	cas3|439aa|down_9|NZ_CP015883.1_1633203_1634520_-	COG4098, comFA, Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair]
GCF_002163735.1_ASM216373v1	NZ_CP015883	Enterococcus faecalis strain sorialis chromosome, complete genome	2	1877088-1877372	2,2	CRT,CRISPRCasFinder	no		WYL,csa3,cas3,cas14j,DinG,csn2,cas2,cas9,DEDDh,RT	Orphan	AAACAACATGACTCTAAAAC,TTGTTTTGGTACCATTCCAAACAACATGACTCTAAAACT	20,39	0	0	NA	NA	NA:II-A,II-B	4,3	4	Orphan	WYL,csa3,cas3,cas14j,DinG,csn2,cas2,cas9,DEDDh,RT	NA,NA	NA|250aa|up_9|NZ_CP015883.1_1862973_1863723_-	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|234aa|up_8|NZ_CP015883.1_1863840_1864542_-	COG2188, PhnF, Transcriptional regulators [Transcription]	NA|808aa|up_7|NZ_CP015883.1_1864671_1867095_-	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning]	NA|404aa|up_6|NZ_CP015883.1_1867408_1868620_-	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]	NA|302aa|up_5|NZ_CP015883.1_1868648_1869554_-	PRK06080, PRK06080, 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Validated	NA|327aa|up_4|NZ_CP015883.1_1869675_1870656_+	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism]	NA|589aa|up_3|NZ_CP015883.1_1870735_1872502_-	COG4987, CydC, ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]	NA|578aa|up_2|NZ_CP015883.1_1872498_1874232_-	TIGR02857, transport_ATP-binding_protein, thiol reductant ABC exporter, CydD subunit	NA|338aa|up_1|NZ_CP015883.1_1874236_1875250_-	pfam02322, Cyt_bd_oxida_II, Cytochrome bd terminal oxidase subunit II	NA|473aa|up_0|NZ_CP015883.1_1875246_1876665_-	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I	NA|288aa|down_0|NZ_CP015883.1_1877528_1878392_-	smart00871, AraC_E_bind, Bacterial transcription activator, effector binding domain	NA|750aa|down_1|NZ_CP015883.1_1878476_1880726_-	PRK07726, PRK07726, DNA topoisomerase 3	NA|122aa|down_2|NZ_CP015883.1_1880688_1881054_-	pfam06279, DUF1033, Protein of unknown function (DUF1033)	NA|190aa|down_3|NZ_CP015883.1_1881151_1881721_-	pfam13305, WHG, WHG domain	NA|172aa|down_4|NZ_CP015883.1_1881853_1882369_+	cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea	NA|413aa|down_5|NZ_CP015883.1_1882385_1883624_+	cd17391, MFS_MdtG_MDR_like, Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|375aa|down_6|NZ_CP015883.1_1883803_1884928_-	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed	NA|115aa|down_7|NZ_CP015883.1_1885153_1885498_-	pfam08866, DUF1831, Putative amino acid metabolism	NA|382aa|down_8|NZ_CP015883.1_1885565_1886711_-	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]	NA|325aa|down_9|NZ_CP015883.1_1886867_1887842_-	PRK02458, PRK02458, ribose-phosphate pyrophosphokinase; Provisional
GCF_002163735.1_ASM216373v1	NZ_CP015883	Enterococcus faecalis strain sorialis chromosome, complete genome	3	2697138-2697211	3	CRISPRCasFinder	no		WYL,csa3,cas3,cas14j,DinG,csn2,cas2,cas9,DEDDh,RT	Orphan	ATAGTTGGCGAGCAACAGAAAAAC	24	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,cas14j,DinG,csn2,cas2,cas9,DEDDh,RT	NA|71aa|up_9|NZ_CP015883.1_2685840_2686053_-,NA	NA|71aa|up_9|NZ_CP015883.1_2685840_2686053_-	NA	NA|289aa|up_8|NZ_CP015883.1_2686221_2687088_-	COG1426, COG1426, Predicted transcriptional regulator contains Xre-like HTH domain [Function unknown]	NA|435aa|up_7|NZ_CP015883.1_2687255_2688560_-	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only]	NA|423aa|up_6|NZ_CP015883.1_2688552_2689821_-	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only]	NA|150aa|up_5|NZ_CP015883.1_2690029_2690479_+	pfam01741, MscL, Large-conductance mechanosensitive channel, MscL	NA|239aa|up_4|NZ_CP015883.1_2690519_2691236_-	pfam13731, WxL, WxL domain surface cell wall-binding	NA|233aa|up_3|NZ_CP015883.1_2691332_2692031_-	pfam13731, WxL, WxL domain surface cell wall-binding	NA|238aa|up_2|NZ_CP015883.1_2692431_2693145_-	TIGR02404, Trehalose_operon_transcriptional_repressor, trehalose operon repressor, B	NA|915aa|up_1|NZ_CP015883.1_2693406_2696151_+	COG1554, ATH1, Trehalose and maltose hydrolases (possible phosphorylases) [Carbohydrate transport and metabolism]	NA|217aa|up_0|NZ_CP015883.1_2696165_2696816_+	TIGR01990, bPGM, beta-phosphoglucomutase	NA|198aa|down_0|NZ_CP015883.1_2697277_2697871_+	pfam18813, PBECR4, phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease4	NA|178aa|down_1|NZ_CP015883.1_2698632_2699166_+	pfam02517, Abi, CAAX protease self-immunity	NA|324aa|down_2|NZ_CP015883.1_2699217_2700189_-	PRK01259, PRK01259, ribose-phosphate diphosphokinase	NA|146aa|down_3|NZ_CP015883.1_2700363_2700801_-	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|185aa|down_4|NZ_CP015883.1_2700933_2701488_-	cd00555, Maf, Nucleotide binding protein Maf	NA|711aa|down_5|NZ_CP015883.1_2701512_2703645_-	COG0323, MutL, DNA mismatch repair enzyme (predicted ATPase) [DNA replication, recombination, and repair]	NA|859aa|down_6|NZ_CP015883.1_2703676_2706253_-	PRK05399, PRK05399, DNA mismatch repair protein MutS; Provisional	NA|129aa|down_7|NZ_CP015883.1_2706253_2706640_-	COG4550, COG4550, Predicted membrane protein [Function unknown]	NA|266aa|down_8|NZ_CP015883.1_2706713_2707511_-	pfam13277, YmdB, YmdB-like protein	NA|519aa|down_9|NZ_CP015883.1_2707670_2709227_-	PRK12704, PRK12704, phosphodiesterase; Provisional
GCF_002163735.1_ASM216373v1	NZ_CP015885	Enterococcus faecalis strain sorialis plasmid Efsorialis-p2, complete sequence	1	438-569	1,1	CRISPRCasFinder,PILER-CR	no			Orphan	TTTCGAAAGTGGGAAAAACCAAC,TTCGTTCGAAAGTGGGAAAAACCAACC	23,27	0	0	NA	NA	NA:NA	2,2	2	Orphan	WYL,csa3,cas3,cas14j,DinG,csn2,cas2,cas9,DEDDh,RT	NA,NA|119aa|down_2|NZ_CP015885.1_5738_6095_+,NA|102aa|down_3|NZ_CP015885.1_6676_6982_+,NA|129aa|down_7|NZ_CP015885.1_14219_14606_+,NA|87aa|down_8|NZ_CP015885.1_14673_14934_+	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|385aa|down_0|NZ_CP015885.1_2827_3982_+	COG1916, COG1916, Uncharacterized homolog of PrgY (pheromone shutdown protein) [Function unknown]	NA|318aa|down_1|NZ_CP015885.1_4014_4968_-	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|119aa|down_2|NZ_CP015885.1_5738_6095_+	NA	NA|102aa|down_3|NZ_CP015885.1_6676_6982_+	NA	NA|893aa|down_4|NZ_CP015885.1_6992_9671_+	TIGR04320, hypothetical_protein, SEC10/PgrA surface exclusion domain	NA|1306aa|down_5|NZ_CP015885.1_9865_13783_+	pfam08363, GbpC, Glucan-binding protein C	NA|118aa|down_6|NZ_CP015885.1_13844_14198_+	pfam09627, PrgU, PrgU-like protein	NA|129aa|down_7|NZ_CP015885.1_14219_14606_+	NA	NA|87aa|down_8|NZ_CP015885.1_14673_14934_+	NA	NA|293aa|down_9|NZ_CP015885.1_14944_15823_+	cd16427, TraM-like, C-terminal domain of transfer protein TraM
GCF_002163735.1_ASM216373v1	NZ_CP015885	Enterococcus faecalis strain sorialis plasmid Efsorialis-p2, complete sequence	2	16123-16291	2	PILER-CR	no			Orphan	ACCAACTAAACCAACAGAACCTGAAAAACCAGT	33	0	0	NA	NA	NA	2	2	Orphan	WYL,csa3,cas3,cas14j,DinG,csn2,cas2,cas9,DEDDh,RT	NA|119aa|up_7|NZ_CP015885.1_5738_6095_+,NA|102aa|up_6|NZ_CP015885.1_6676_6982_+,NA|129aa|up_2|NZ_CP015885.1_14219_14606_+,NA|87aa|up_1|NZ_CP015885.1_14673_14934_+,NA|206aa|down_1|NZ_CP015885.1_18002_18620_+,NA|105aa|down_3|NZ_CP015885.1_19019_19334_+,NA|92aa|down_5|NZ_CP015885.1_20350_20626_+,NA|161aa|down_7|NZ_CP015885.1_21046_21529_+	NA|385aa|up_9|NZ_CP015885.1_2827_3982_+	COG1916, COG1916, Uncharacterized homolog of PrgY (pheromone shutdown protein) [Function unknown]	NA|318aa|up_8|NZ_CP015885.1_4014_4968_-	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|119aa|up_7|NZ_CP015885.1_5738_6095_+	NA	NA|102aa|up_6|NZ_CP015885.1_6676_6982_+	NA	NA|893aa|up_5|NZ_CP015885.1_6992_9671_+	TIGR04320, hypothetical_protein, SEC10/PgrA surface exclusion domain	NA|1306aa|up_4|NZ_CP015885.1_9865_13783_+	pfam08363, GbpC, Glucan-binding protein C	NA|118aa|up_3|NZ_CP015885.1_13844_14198_+	pfam09627, PrgU, PrgU-like protein	NA|129aa|up_2|NZ_CP015885.1_14219_14606_+	NA	NA|87aa|up_1|NZ_CP015885.1_14673_14934_+	NA	NA|293aa|up_0|NZ_CP015885.1_14944_15823_+	cd16427, TraM-like, C-terminal domain of transfer protein TraM	NA|424aa|down_0|NZ_CP015885.1_16728_18000_+	PRK08581, PRK08581, amidase domain-containing protein	NA|206aa|down_1|NZ_CP015885.1_18002_18620_+	NA	NA|139aa|down_2|NZ_CP015885.1_18603_19020_+	cd02950, TxlA, TRX-like protein A (TxlA) family; TxlA was originally isolated from the cyanobacterium Synechococcus	NA|105aa|down_3|NZ_CP015885.1_19019_19334_+	NA	NA|345aa|down_4|NZ_CP015885.1_19326_20361_+	pfam12642, TpcC, Conjugative transposon protein TcpC	NA|92aa|down_5|NZ_CP015885.1_20350_20626_+	NA	NA|130aa|down_6|NZ_CP015885.1_20625_21015_+	pfam12648, TcpE, TcpE family	NA|161aa|down_7|NZ_CP015885.1_21046_21529_+	NA	NA|153aa|down_8|NZ_CP015885.1_21621_22080_+	PRK07275, PRK07275, single-stranded DNA-binding protein; Provisional	NA|831aa|down_9|NZ_CP015885.1_22184_24677_+	pfam12846, AAA_10, AAA-like domain
