The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP021474	Pediococcus pentosaceus strain SRCM100892 chromosome, complete genome	1785266	801237	842587	1785266	head,protease,portal,integrase,capsid,terminase,holin,tail	Lactobacillus_phage(75.76%)	59	793067:793082	816751:816766
793067:793082	attL	AAAATACAAAAATAGA	NA	NA	NA	NA
WP_094104432.1|801237_802311_-|integrase	site-specific integrase	integrase	Q9ZXG6	Leuconostoc_phage	36.0	6.8e-45
WP_094104433.1|802462_802750_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094104434.1|803103_803949_-	hypothetical protein	NA	A0A1S5SBK8	Streptococcus_phage	22.3	1.4e-08
WP_094104435.1|804169_804589_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094104436.1|804585_805065_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060743628.1|805187_805697_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094104437.1|805752_806058_-	hypothetical protein	NA	D2KRD5	Lactobacillus_phage	50.0	1.9e-16
WP_023440064.1|806070_806412_-	helix-turn-helix transcriptional regulator	NA	Q8W5Y0	Listeria_phage	44.0	6.1e-16
WP_023440065.1|806679_806871_+	hypothetical protein	NA	NA	NA	NA	NA
WP_094104438.1|806871_807330_+	hypothetical protein	NA	NA	NA	NA	NA
WP_094104439.1|807326_807527_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151201389.1|807480_807717_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094104441.1|807773_808541_+	phage antirepressor KilAC domain-containing protein	NA	A0A0A7DN31	Lactobacillus_phage	56.0	2.3e-63
WP_094104442.1|808597_808804_+	hypothetical protein	NA	NA	NA	NA	NA
WP_094104443.1|808867_809071_+	DUF2829 domain-containing protein	NA	NA	NA	NA	NA
WP_094104444.1|809211_809421_+	hypothetical protein	NA	NA	NA	NA	NA
WP_094104445.1|809734_810001_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094104446.1|810224_810686_+	chromosome segregation protein SMC	NA	NA	NA	NA	NA
WP_094104447.1|810682_811339_+	ERF family protein	NA	A0A2H4JA34	uncultured_Caudovirales_phage	33.7	8.4e-22
WP_061812702.1|811341_811740_+	single-stranded DNA-binding protein	NA	D6PSU2	Lactobacillus_phage	56.8	4.3e-37
WP_094104448.1|811750_812428_+	hypothetical protein	NA	E9LUU3	Lactobacillus_phage	64.8	2.6e-82
WP_094104449.1|813151_813970_+	ATP-binding protein	NA	O03914	Lactobacillus_phage	50.0	3.2e-63
WP_094104450.1|814086_814497_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A0P0IXM5	Lactobacillus_phage	60.3	5.4e-43
WP_094104451.1|814493_814712_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002833141.1|814849_815044_+	hypothetical protein	NA	NA	NA	NA	NA
WP_094104452.1|815043_815397_+	hypothetical protein	NA	O03921	Lactobacillus_phage	55.2	3.7e-24
WP_094104453.1|815396_815690_+	hypothetical protein	NA	NA	NA	NA	NA
WP_094104454.1|815690_816236_+	DUF1642 domain-containing protein	NA	A0A141E054	Streptococcus_phage	33.3	1.2e-08
WP_094104455.1|816228_816657_+	hypothetical protein	NA	NA	NA	NA	NA
WP_094104456.1|816861_817080_+	hypothetical protein	NA	NA	NA	NA	NA
816751:816766	attR	AAAATACAAAAATAGA	NA	NA	NA	NA
WP_094104457.1|817360_817687_+	hypothetical protein	NA	NA	NA	NA	NA
WP_094104458.1|817687_817978_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151201390.1|817952_818345_+	hypothetical protein	NA	NA	NA	NA	NA
WP_094104460.1|818419_818836_+	RNA polymerase subunit sigma-70	NA	O03925	Lactobacillus_phage	30.9	9.4e-11
WP_094104461.1|819366_819822_+	HNH endonuclease	NA	B8R694	Lactobacillus_phage	39.0	2.8e-24
WP_094104462.1|819818_820100_+	hypothetical protein	NA	NA	NA	NA	NA
WP_094104463.1|820321_820786_+|terminase	phage terminase small subunit P27 family	terminase	E9LUP8	Lactobacillus_phage	62.7	1.5e-46
WP_094104464.1|820785_822660_+|terminase	terminase large subunit	terminase	A0A0M7RDK9	Lactobacillus_phage	41.4	1.4e-141
WP_094104466.1|822972_823974_+|portal	phage portal protein	portal	A0A0M9JJ63	Lactobacillus_phage	35.5	6.5e-50
WP_094104862.1|823957_824521_+|head,protease	HK97 family phage prohead protease	head,protease	B8R651	Lactobacillus_phage	49.1	6.9e-41
WP_094104467.1|824548_825880_+|capsid	phage major capsid protein	capsid	D2KRA9	Lactobacillus_phage	42.6	1.0e-79
WP_094104468.1|825962_826175_+	hypothetical protein	NA	A0A0M9JJ52	Lactobacillus_phage	44.8	2.1e-06
WP_094104469.1|826494_826854_+|head	phage head closure protein	head	A0A2P0ZLF0	Lactobacillus_phage	39.5	1.1e-15
WP_094104863.1|826873_827269_+|tail	phage tail protein	tail	A0A286QQY0	Streptococcus_phage	56.9	1.0e-30
WP_094104470.1|827268_827643_+	DUF806 family protein	NA	A0A2P0ZLF4	Lactobacillus_phage	30.5	3.4e-12
WP_094104471.1|827656_828262_+	hypothetical protein	NA	Q9AZL7	Lactococcus_phage	41.6	1.0e-34
WP_094104472.1|828398_828812_+	hypothetical protein	NA	NA	NA	NA	NA
WP_094104473.1|829020_830664_+	hypothetical protein	NA	A0A2I6QR39	Streptococcus_phage	49.5	2.1e-74
WP_094104474.1|830971_831442_+	hypothetical protein	NA	Q6J1X5	Lactobacillus_phage	61.0	3.0e-05
WP_094104475.1|831554_833648_+	peptidoglycan DD-metalloendopeptidase family protein	NA	B8R657	Lactobacillus_phage	55.5	5.4e-46
WP_094104476.1|833649_835419_+	hypothetical protein	NA	U3PDQ7	Lactobacillus_phage	23.0	1.6e-19
WP_094104477.1|835436_837098_+	hypothetical protein	NA	A0A1I9KKS3	Lactobacillus_phage	34.3	6.5e-71
WP_151201391.1|837013_837955_+	hypothetical protein	NA	A0A0A7DMR8	Lactobacillus_phage	29.0	6.2e-18
WP_094104479.1|837951_840249_+	hypothetical protein	NA	A0A1S5RCP2	Lactobacillus_phage	45.8	8.0e-27
WP_094104480.1|840245_840476_+	hypothetical protein	NA	NA	NA	NA	NA
WP_094104481.1|840653_840902_+	hypothetical protein	NA	A0A0P0I3K6	Lactobacillus_phage	47.4	1.6e-05
WP_094104864.1|840943_841228_+	hypothetical protein	NA	NA	NA	NA	NA
WP_094104482.1|841227_841479_+|holin	holin	holin	NA	NA	NA	NA
WP_094104483.1|841462_842587_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A0P0I386	Lactobacillus_phage	51.4	8.8e-96
>prophage 2
NZ_CP021474	Pediococcus pentosaceus strain SRCM100892 chromosome, complete genome	1785266	934287	995181	1785266	protease,plate,portal,capsid,tRNA,terminase,holin,tail	Lactobacillus_phage(51.61%)	71	NA	NA
WP_061812052.1|934287_935187_-|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_002833619.1|935325_935676_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_094104510.1|935692_938413_-	translation initiation factor IF-2	NA	A0A2H4UTS4	Bodo_saltans_virus	25.1	9.2e-22
WP_011673321.1|938727_939021_-	YlxR family protein	NA	NA	NA	NA	NA
WP_002833615.1|939042_940131_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
WP_002833614.1|940144_940621_-	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_094104511.1|940740_945054_-	PolC-type DNA polymerase III	NA	A0A0K2SUJ2	Clostridium_phage	35.1	1.8e-19
WP_002833612.1|945147_946863_-|tRNA	proline--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	23.6	2.2e-05
WP_061812048.1|946890_948153_-|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_061812071.1|948176_948962_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_094104512.1|948972_949722_-	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	41.3	3.0e-23
WP_094104513.1|949979_950501_-	ribosome recycling factor	NA	NA	NA	NA	NA
WP_002833607.1|950538_951264_-	UMP kinase	NA	NA	NA	NA	NA
WP_002833606.1|951417_952296_-	elongation factor Ts	NA	NA	NA	NA	NA
WP_002833605.1|952411_953194_-	30S ribosomal protein S2	NA	NA	NA	NA	NA
WP_094104514.1|953345_954341_-	D-2-hydroxyacid dehydrogenase	NA	M1I4S0	Paramecium_bursaria_Chlorella_virus	32.9	2.2e-45
WP_002833603.1|954461_954749_-	GIY-YIG nuclease family protein	NA	NA	NA	NA	NA
WP_094104515.1|954729_955485_-|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	tRNA	NA	NA	NA	NA
WP_094104516.1|955559_956204_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_094104517.1|956215_956437_-	YneF family protein	NA	NA	NA	NA	NA
WP_002833598.1|956507_956756_-	DUF896 domain-containing protein	NA	NA	NA	NA	NA
WP_094104518.1|956889_957519_+	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	45.1	1.2e-12
WP_061812042.1|958235_959402_-	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA	NA
WP_061812041.1|959562_960939_-	amino acid permease	NA	NA	NA	NA	NA
WP_094104519.1|962229_963354_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A0P0IX40	Lactobacillus_phage	54.3	7.0e-101
WP_094104520.1|963337_963577_-|holin	holin	holin	NA	NA	NA	NA
WP_094104521.1|964053_964365_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094104522.1|964376_965408_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094104523.1|965407_967096_-|plate	phage baseplate upper protein	plate	O03968	Lactobacillus_phage	52.8	3.0e-63
WP_094104524.1|967095_967392_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094104525.1|967381_967708_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094104526.1|967697_968834_-	hypothetical protein	NA	O03938	Lactobacillus_phage	40.9	1.3e-54
WP_094104527.1|968843_969641_-|tail	phage tail family protein	tail	D2KRB8	Lactobacillus_phage	42.6	1.8e-58
WP_094104528.1|969693_970986_-	peptidoglycan DD-metalloendopeptidase family protein	NA	D2KRB7	Lactobacillus_phage	40.3	3.9e-39
WP_094104529.1|971063_971549_-	hypothetical protein	NA	A7DYB8	Streptococcus_phage	55.8	2.8e-22
WP_094104530.1|971542_972085_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094104531.1|972402_972993_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094104532.1|973088_974966_-	hypothetical protein	NA	E9LUR1	Lactobacillus_phage	39.2	1.5e-79
WP_094104533.1|974969_975251_-	hypothetical protein	NA	A8ASK5	Listeria_phage	39.4	1.2e-06
WP_094104534.1|975226_975601_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094104535.1|975607_976045_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094104536.1|976117_976657_-|capsid	capsid protein	capsid	O03972	Lactobacillus_phage	52.6	5.1e-41
WP_094104537.1|976660_977056_-	hypothetical protein	NA	Q5YA65	Bacillus_phage	40.5	3.0e-22
WP_094104538.1|977077_977392_-	hypothetical protein	NA	U3PIU9	Lactobacillus_phage	57.1	8.6e-17
WP_094104539.1|977391_977739_-|capsid	capsid protein	capsid	O03932	Lactobacillus_phage	45.3	9.2e-20
WP_094104540.1|977735_978152_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094104541.1|978219_979128_-	hypothetical protein	NA	Q6SED2	Lactobacillus_prophage	64.3	4.8e-108
WP_094104542.1|979140_979698_-	hypothetical protein	NA	A8ASJ5	Listeria_phage	42.1	8.7e-20
WP_094104543.1|979796_980930_-	hypothetical protein	NA	O03929	Lactobacillus_phage	43.0	1.7e-70
WP_094104544.1|980926_982474_-|portal	phage portal protein	portal	O03928	Lactobacillus_phage	57.0	6.5e-158
WP_094104545.1|983846_984347_-|terminase	terminase small subunit	terminase	O03926	Lactobacillus_phage	65.1	5.9e-52
WP_094104546.1|984346_984556_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151201392.1|984897_985284_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094104548.1|985930_986374_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094104549.1|986563_986782_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094104550.1|986744_986987_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094104551.1|987238_987610_-	hypothetical protein	NA	O03921	Lactobacillus_phage	57.3	1.2e-28
WP_094104552.1|987602_988142_-	DUF1642 domain-containing protein	NA	A0A141E054	Streptococcus_phage	40.2	8.2e-15
WP_094104553.1|988141_988504_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151201393.1|988669_989089_-	DeoR family transcriptional regulator	NA	NA	NA	NA	NA
WP_094104555.1|988997_989522_-	single-stranded DNA-binding protein	NA	A0A2H4J1H8	uncultured_Caudovirales_phage	65.6	7.9e-39
WP_094104556.1|989539_989800_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094104557.1|989768_990470_-	hypothetical protein	NA	E9LUU3	Lactobacillus_phage	64.8	2.0e-82
WP_094104558.1|990473_991304_-	helix-turn-helix domain-containing protein	NA	U5U793	Lactobacillus_phage	34.3	9.9e-36
WP_094104866.1|991314_992085_-	hypothetical protein	NA	A0A0P0IZH9	Lactobacillus_phage	45.3	1.9e-57
WP_094104559.1|992119_992884_-	phage recombination protein Bet	NA	A8ATK8	Listeria_phage	51.5	2.1e-56
WP_094104560.1|992876_993158_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094104561.1|993395_993671_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_094104867.1|993671_993995_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094104562.1|994203_994446_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094104868.1|994863_995181_+	helix-turn-helix transcriptional regulator	NA	A8ATX5	Listeria_phage	50.6	2.2e-12
>prophage 1
NZ_CP021471	Pediococcus pentosaceus strain SRCM100892 plasmid pPC892-1, complete sequence	55780	0	981	55780		Planktothrix_phage(100.0%)	1	NA	NA
WP_094104115.1|0_981_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	8.7e-15
>prophage 2
NZ_CP021471	Pediococcus pentosaceus strain SRCM100892 plasmid pPC892-1, complete sequence	55780	5028	10116	55780	transposase	Lactobacillus_phage(50.0%)	7	NA	NA
WP_094104119.1|5028_5280_+|transposase	transposase	transposase	Q6J1X3	Lactobacillus_phage	95.2	2.7e-37
WP_151201377.1|5419_6175_+|transposase	IS3 family transposase	transposase	Q6J1X2	Lactobacillus_phage	97.2	3.8e-135
WP_094104121.1|6457_7111_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094104123.1|7336_7495_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081035682.1|7894_8497_+	recombinase family protein	NA	A0A0F7LA37	Escherichia_phage	39.1	4.0e-18
WP_010625593.1|8972_9293_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151201378.1|9279_10116_-	AAA family ATPase	NA	F0PIG8	Enterococcus_phage	33.1	1.9e-26
>prophage 3
NZ_CP021471	Pediococcus pentosaceus strain SRCM100892 plasmid pPC892-1, complete sequence	55780	35045	35783	55780		Streptomyces_phage(100.0%)	1	NA	NA
WP_094104130.1|35045_35783_+	GntR family transcriptional regulator	NA	A0A291LID1	Streptomyces_phage	39.7	1.3e-07
>prophage 4
NZ_CP021471	Pediococcus pentosaceus strain SRCM100892 plasmid pPC892-1, complete sequence	55780	39564	46098	55780		Liberibacter_phage(50.0%)	6	NA	NA
WP_094104133.1|39564_42726_-	type I restriction endonuclease subunit R	NA	A0A220A398	Liberibacter_phage	22.6	3.7e-22
WP_094104134.1|42790_42997_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094104135.1|43241_43979_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_094104136.1|44104_44491_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094104137.1|44483_44804_-	acetyl-CoA carboxylase	NA	NA	NA	NA	NA
WP_094104138.1|44796_46098_-	Y-family DNA polymerase	NA	M1Q231	Streptococcus_phage	38.9	2.3e-79
>prophage 5
NZ_CP021471	Pediococcus pentosaceus strain SRCM100892 plasmid pPC892-1, complete sequence	55780	51164	52283	55780		uncultured_virus(100.0%)	1	NA	NA
WP_094104142.1|51164_52283_-	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	A0A218MNE0	uncultured_virus	42.1	1.3e-75
