assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002174235.1_ASM217423v1	NZ_CP021674	Lactobacillus brevis strain SRCM101106 chromosome, complete genome	1	41338-41487	1	CRISPRCasFinder	no		cas9,cas1,cas2,csn2,csa3,cas3,DEDDh,DinG	Orphan	GTATTCCCCACAGGTGTGGGGGTGATCC	28	0	0	NA	NA	I-E,II-B	2	2	Orphan	cas9,cas1,cas2,csn2,csa3,cas3,DEDDh,DinG	NA|236aa|up_6|NZ_CP021674.1_32304_33012_+,NA|63aa|up_5|NZ_CP021674.1_33127_33316_-,NA|122aa|down_3|NZ_CP021674.1_45040_45406_+,NA|302aa|down_8|NZ_CP021674.1_55559_56465_-	NA|492aa|up_9|NZ_CP021674.1_26313_27789_+	COG2211, MelB, Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]	NA|541aa|up_8|NZ_CP021674.1_27808_29431_+	COG3507, XynB, Beta-xylosidase [Carbohydrate transport and metabolism]	NA|607aa|up_7|NZ_CP021674.1_30170_31991_+	pfam09972, DUF2207, Predicted membrane protein (DUF2207)	NA|236aa|up_6|NZ_CP021674.1_32304_33012_+	NA	NA|63aa|up_5|NZ_CP021674.1_33127_33316_-	NA	NA|174aa|up_4|NZ_CP021674.1_33713_34235_-	pfam06177, QueT, QueT transporter	NA|1039aa|up_3|NZ_CP021674.1_34495_37612_+	pfam09586, YfhO, Bacterial membrane protein YfhO	NA|305aa|up_2|NZ_CP021674.1_37713_38628_+	cd13962, PT_UbiA_UBIAD1, 1,4-Dihydroxy-2-naphthoate octaprenyltransferase	NA|312aa|up_1|NZ_CP021674.1_39586_40522_-	TIGR01188, drrA, daunorubicin resistance ABC transporter ATP-binding subunit	NA|177aa|up_0|NZ_CP021674.1_40667_41198_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|437aa|down_0|NZ_CP021674.1_41647_42958_-	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and    metabolism]	NA|328aa|down_1|NZ_CP021674.1_43238_44222_-	cd19083, AKR_AKR11A1_11D1, AKR11A and  AKR11D families of aldo-keto reductase (AKR)	NA|200aa|down_2|NZ_CP021674.1_44364_44964_+	pfam13460, NAD_binding_10, NAD(P)H-binding	NA|122aa|down_3|NZ_CP021674.1_45040_45406_+	NA	NA|338aa|down_4|NZ_CP021674.1_45537_46551_+	cd10954, CE4_CtAXE_like, Catalytic NodB homology domain of Clostridium thermocellum acetylxylan esterase and its bacterial homologs	NA|381aa|down_5|NZ_CP021674.1_46653_47796_-	PRK08588, PRK08588, succinyl-diaminopimelate desuccinylase; Reviewed	NA|1202aa|down_6|NZ_CP021674.1_48090_51696_+	TIGR02773, ATP-dependent_helicase/deoxyribonuclease_subunit_B, helicase-exonuclease AddAB, AddB subunit	NA|1263aa|down_7|NZ_CP021674.1_51679_55468_+	TIGR02785, ATP-dependent_helicase/nuclease_subunit_A, helicase-exonuclease AddAB, AddA subunit, Firmicutes type	NA|302aa|down_8|NZ_CP021674.1_55559_56465_-	NA	NA|254aa|down_9|NZ_CP021674.1_56879_57641_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein
GCF_002174235.1_ASM217423v1	NZ_CP021674	Lactobacillus brevis strain SRCM101106 chromosome, complete genome	2	156456-157878	1,2,1,2	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas9,cas1,cas2,csn2	cas9,cas1,cas2,csn2,csa3,cas3,DEDDh,DinG	Type II-C,Type II-B,Type II-A	GCTTTAGAATCTTGGTAAATCAATAGGGTTAAGAAC,GCTTTAGAATCTTGGTAAATCAATAGGGTTAAGAAC,GCTTTAGAATCTTGGTAAATCAATAGGGTTAAGAAC,GCTTTAGAATCTTGGTAAATCAATAGGGTTAAGAAC	36,36,36,36	0	0	NA	NA	NA:NA:NA:NA	15,21,21,15	21	TypeII-C,TypeII-B,TypeII-A	cas9,cas1,cas2,csn2,csa3,cas3,DEDDh,DinG	NA|163aa|up_6|NZ_CP021674.1_146885_147374_+,NA|177aa|up_5|NZ_CP021674.1_147360_147891_+,NA|79aa|down_3|NZ_CP021674.1_164318_164555_+,NA|141aa|down_9|NZ_CP021674.1_168340_168763_-	NA|558aa|up_9|NZ_CP021674.1_142381_144055_-	cd11333, AmyAc_SI_OligoGlu_DGase, Alpha amylase catalytic domain found in Sucrose isomerases, oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), dextran glucosidase (also called glucan 1,6-alpha-glucosidase), and related proteins	NA|461aa|up_8|NZ_CP021674.1_144075_145458_-	cd17313, MFS_SLC45_SUC, Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters	NA|333aa|up_7|NZ_CP021674.1_145652_146651_+	COG1609, PurR, Transcriptional regulators [Transcription]	NA|163aa|up_6|NZ_CP021674.1_146885_147374_+	NA	NA|177aa|up_5|NZ_CP021674.1_147360_147891_+	NA	NA|548aa|up_4|NZ_CP021674.1_148080_149724_-	cd08504, PBP2_OppA, The substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold	cas9|1370aa|up_3|NZ_CP021674.1_150249_154359_+	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9	cas1|302aa|up_2|NZ_CP021674.1_154570_155476_+	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas2|102aa|up_1|NZ_CP021674.1_155453_155759_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|222aa|up_0|NZ_CP021674.1_155755_156421_+	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2	NA|460aa|down_0|NZ_CP021674.1_158533_159913_+	cd17332, MFS_MelB_like, Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily	NA|351aa|down_1|NZ_CP021674.1_159974_161027_+	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|746aa|down_2|NZ_CP021674.1_161032_163270_+	COG1554, ATH1, Trehalose and maltose hydrolases (possible phosphorylases) [Carbohydrate transport and metabolism]	NA|79aa|down_3|NZ_CP021674.1_164318_164555_+	NA	NA|278aa|down_4|NZ_CP021674.1_164766_165600_+	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)	NA|177aa|down_5|NZ_CP021674.1_165676_166207_+	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|105aa|down_6|NZ_CP021674.1_166211_166526_-	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]	NA|109aa|down_7|NZ_CP021674.1_166527_166854_-	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]	NA|370aa|down_8|NZ_CP021674.1_167164_168274_+	PRK09423, gldA, glycerol dehydrogenase; Provisional	NA|141aa|down_9|NZ_CP021674.1_168340_168763_-	NA
GCF_002174235.1_ASM217423v1	NZ_CP021674	Lactobacillus brevis strain SRCM101106 chromosome, complete genome	3	753416-753547	3	CRISPRCasFinder	no		cas9,cas1,cas2,csn2,csa3,cas3,DEDDh,DinG	Orphan	CTGGCTAAGTTAAACTTAGGTAGTACATCTGCGCAAT	37	0	0	NA	NA	NA	1	1	Orphan	cas9,cas1,cas2,csn2,csa3,cas3,DEDDh,DinG	NA|76aa|up_6|NZ_CP021674.1_749095_749323_+,NA|160aa|up_3|NZ_CP021674.1_751674_752154_+,NA|64aa|up_2|NZ_CP021674.1_752168_752360_+,NA|66aa|down_2|NZ_CP021674.1_756248_756446_+,NA|124aa|down_7|NZ_CP021674.1_760043_760415_+	NA|386aa|up_9|NZ_CP021674.1_746682_747840_-	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|202aa|up_8|NZ_CP021674.1_747910_748516_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|60aa|up_7|NZ_CP021674.1_748660_748840_+	pfam12728, HTH_17, Helix-turn-helix domain	NA|76aa|up_6|NZ_CP021674.1_749095_749323_+	NA	NA|267aa|up_5|NZ_CP021674.1_749334_750135_+	cd04859, Prim_Pol, Prim_Pol: Primase-polymerase (primpol) domain of the type found in bifunctional replicases from archaeal plasmids, including ORF904 protein of the crenarchaeal plasmid pRN1 from Sulfolobus islandicus (pRN1 primpol)	NA|465aa|up_4|NZ_CP021674.1_750134_751529_+	COG5545, COG5545, Predicted P-loop ATPase and inactivated derivatives [General function prediction only]	NA|160aa|up_3|NZ_CP021674.1_751674_752154_+	NA	NA|64aa|up_2|NZ_CP021674.1_752168_752360_+	NA	NA|114aa|up_1|NZ_CP021674.1_752346_752688_+	pfam05521, Phage_H_T_join, Phage head-tail joining protein	NA|137aa|up_0|NZ_CP021674.1_752901_753312_+	cd00085, HNHc, HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins	NA|158aa|down_0|NZ_CP021674.1_754121_754595_+	pfam05119, Terminase_4, Phage terminase, small subunit	NA|566aa|down_1|NZ_CP021674.1_754591_756289_+	COG4626, COG4626, Phage terminase-like protein, large subunit [General function prediction only]	NA|66aa|down_2|NZ_CP021674.1_756248_756446_+	NA	NA|369aa|down_3|NZ_CP021674.1_756442_757549_+	TIGR01537, portal_protein, phage portal protein, HK97 family	NA|525aa|down_4|NZ_CP021674.1_757538_759113_+	TIGR01554, prophage_Lp3_protein_18, phage major capsid protein, HK97 family	NA|125aa|down_5|NZ_CP021674.1_759211_759586_+	pfam06993, DUF1304, Protein of unknown function (DUF1304)	NA|90aa|down_6|NZ_CP021674.1_759600_759870_+	cd08054, gp6, Head-Tail Connector Protein gp6 of Bacteriophage HK97 and similar proteins	NA|124aa|down_7|NZ_CP021674.1_760043_760415_+	NA	NA|67aa|down_8|NZ_CP021674.1_760533_760734_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|322aa|down_9|NZ_CP021674.1_761433_762399_+	pfam03496, ADPrib_exo_Tox, ADP-ribosyltransferase exoenzyme
GCF_002174235.1_ASM217423v1	NZ_CP021674	Lactobacillus brevis strain SRCM101106 chromosome, complete genome	4	2329741-2329826	4	CRISPRCasFinder	no		cas9,cas1,cas2,csn2,csa3,cas3,DEDDh,DinG	Orphan	TCACCCCCACACATGTGGGGAATAC	25	0	0	NA	NA	I-E,II-B	1	1	Orphan	cas9,cas1,cas2,csn2,csa3,cas3,DEDDh,DinG	NA,NA|563aa|down_2|NZ_CP021674.1_2333097_2334786_+,NA|63aa|down_6|NZ_CP021674.1_2337573_2337762_+,NA|69aa|down_7|NZ_CP021674.1_2338224_2338431_+,NA|89aa|down_8|NZ_CP021674.1_2338955_2339222_+,NA|88aa|down_9|NZ_CP021674.1_2339386_2339650_-	NA|478aa|up_9|NZ_CP021674.1_2317738_2319172_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|507aa|up_8|NZ_CP021674.1_2319270_2320791_-	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|158aa|up_7|NZ_CP021674.1_2321121_2321595_+	PRK02551, PRK02551, flavoprotein NrdI; Provisional	NA|249aa|up_6|NZ_CP021674.1_2321591_2322338_+	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA	NA|449aa|up_5|NZ_CP021674.1_2322407_2323754_-	cd17345, MFS_GlpT, Glycerol-3-Phosphate Transporter of the Major Facilitator Superfamily of transporters	NA|389aa|up_4|NZ_CP021674.1_2323911_2325078_-	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|272aa|up_3|NZ_CP021674.1_2325331_2326147_-	PRK05901, PRK05901, RNA polymerase sigma factor; Provisional	NA|281aa|up_2|NZ_CP021674.1_2326386_2327229_+	cd19088, AKR_AKR13B1, AKR13B family of aldo-keto reductase (AKR)	NA|476aa|up_1|NZ_CP021674.1_2327330_2328758_-	cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like	NA|192aa|up_0|NZ_CP021674.1_2328827_2329403_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|274aa|down_0|NZ_CP021674.1_2330150_2330972_-	pfam02522, Antibiotic_NAT, Aminoglycoside 3-N-acetyltransferase	NA|496aa|down_1|NZ_CP021674.1_2331432_2332920_+	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated	NA|563aa|down_2|NZ_CP021674.1_2333097_2334786_+	NA	NA|146aa|down_3|NZ_CP021674.1_2334869_2335307_-	COG2153, ElaA, Predicted acyltransferase [General function prediction only]	NA|143aa|down_4|NZ_CP021674.1_2335391_2335820_+	COG1846, MarR, Transcriptional regulators [Transcription]	NA|481aa|down_5|NZ_CP021674.1_2335964_2337407_+	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase	NA|63aa|down_6|NZ_CP021674.1_2337573_2337762_+	NA	NA|69aa|down_7|NZ_CP021674.1_2338224_2338431_+	NA	NA|89aa|down_8|NZ_CP021674.1_2338955_2339222_+	NA	NA|88aa|down_9|NZ_CP021674.1_2339386_2339650_-	NA
