assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002197145.1_ASM219714v1	NZ_CP021804	Sinorhizobium meliloti strain T073 chromosome, complete genome	1	518-629	1	CRISPRCasFinder	no		cas3,csa3,WYL,DEDDh	Orphan	ATTCCTGTGACGAGCACAGGAATGAGGG	28	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,WYL,DEDDh,RT	NA,NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|640aa|down_0|NZ_CP021804.1_754_2674_-	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane]	NA|561aa|down_1|NZ_CP021804.1_2942_4625_+	PRK13981, PRK13981, NAD synthetase; Provisional	NA|276aa|down_2|NZ_CP021804.1_4627_5455_+	COG0823, TolB, Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]	NA|341aa|down_3|NZ_CP021804.1_5465_6488_-	cd06307, PBP1_sugar_binding, periplasmic sugar-binding domain of uncharacterized transport systems	NA|398aa|down_4|NZ_CP021804.1_6585_7779_+	COG5285, COG5285, Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin [Secondary metabolites biosynthesis, transport, and catabolism]	NA|274aa|down_5|NZ_CP021804.1_8150_8972_+	PRK06198, PRK06198, short chain dehydrogenase; Provisional	NA|228aa|down_6|NZ_CP021804.1_9269_9953_+	cd02145, BluB, 5,6-dimethylbenzimidazole synthase	NA|376aa|down_7|NZ_CP021804.1_9976_11104_-	pfam11064, DUF2865, Protein of unknown function (DUF2865)	NA|215aa|down_8|NZ_CP021804.1_11271_11916_-	COG3916, LasI, N-acyl-L-homoserine lactone synthetase [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]	NA|246aa|down_9|NZ_CP021804.1_12072_12810_-	cd06170, LuxR_C_like, C-terminal DNA-binding domain of LuxR-like proteins
GCF_002197145.1_ASM219714v1	NZ_CP021804	Sinorhizobium meliloti strain T073 chromosome, complete genome	2	1945447-1945509	2	CRISPRCasFinder	no		cas3,csa3,WYL,DEDDh	Orphan	CCCTCTCCCCGCATGCGGGGAGA	23	1	1	1945470-1945486	NZ_CP021804.1_3258992-3259008	NA	1	1	Orphan	cas3,csa3,WYL,DEDDh,RT	NA,NA	NA|273aa|up_9|NZ_CP021804.1_1932861_1933680_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]	NA|602aa|up_8|NZ_CP021804.1_1933697_1935503_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|340aa|up_7|NZ_CP021804.1_1935611_1936631_-	PRK00292, glk, glucokinase; Provisional	NA|127aa|up_6|NZ_CP021804.1_1936692_1937073_-	COG1803, MgsA, Methylglyoxal synthase [Carbohydrate transport and metabolism]	NA|356aa|up_5|NZ_CP021804.1_1937193_1938261_-	COG3770, MepA, Murein endopeptidase [Cell envelope biogenesis, outer membrane]	NA|620aa|up_4|NZ_CP021804.1_1938552_1940412_+	cd08497, PBP2_NikA_DppA_OppA_like_14, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|361aa|up_3|NZ_CP021804.1_1940592_1941675_+	COG4174, COG4174, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|378aa|up_2|NZ_CP021804.1_1941674_1942808_+	COG4239, COG4239, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|543aa|up_1|NZ_CP021804.1_1942816_1944445_+	COG4172, COG4172, ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]	NA|320aa|up_0|NZ_CP021804.1_1944455_1945415_+	cd12164, GDH_like_2, Putative glycerate dehydrogenase and related proteins of the D-specific 2-hydroxy dehydrogenase family	NA|285aa|down_0|NZ_CP021804.1_1945651_1946506_-	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane]	NA|115aa|down_1|NZ_CP021804.1_1946514_1946859_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|464aa|down_2|NZ_CP021804.1_1946946_1948338_-	COG0260, PepB, Leucyl aminopeptidase [Amino acid transport and metabolism]	NA|270aa|down_3|NZ_CP021804.1_1948468_1949278_+	COG5010, TadD, Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion]	NA|388aa|down_4|NZ_CP021804.1_1949534_1950698_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|328aa|down_5|NZ_CP021804.1_1950926_1951910_-	COG2064, TadC, Flp pilus assembly protein TadC [Cell motility and secretion / Intracellular trafficking and secretion]	NA|337aa|down_6|NZ_CP021804.1_1951917_1952928_-	COG4965, TadB, Flp pilus assembly protein TadB [Intracellular trafficking and secretion]	NA|467aa|down_7|NZ_CP021804.1_1952986_1954387_-	COG4962, CpaF, Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion]	NA|429aa|down_8|NZ_CP021804.1_1954517_1955804_-	COG4963, CpaE, Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion]	NA|243aa|down_9|NZ_CP021804.1_1955826_1956555_-	COG5461, COG5461, Type IV pili component [Cell motility and secretion]
GCF_002197145.1_ASM219714v1	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	1	373044-373146	1	CRISPRCasFinder	no		RT,csa3	Orphan	TCGGCGGCGGCGGCGGTGCGGGCGGCA	27	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,WYL,DEDDh,RT	NA|163aa|up_8|NZ_CP021806.1_357724_358213_+,NA|133aa|up_3|NZ_CP021806.1_366408_366807_+,NA|131aa|up_0|NZ_CP021806.1_368907_369300_+,NA|309aa|down_2|NZ_CP021806.1_378388_379315_+,NA|181aa|down_4|NZ_CP021806.1_380190_380733_+	NA|486aa|up_9|NZ_CP021806.1_356260_357718_+	TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase	NA|163aa|up_8|NZ_CP021806.1_357724_358213_+	NA	NA|341aa|up_7|NZ_CP021806.1_358436_359459_+	TIGR03261, phnS2, putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein	NA|388aa|up_6|NZ_CP021806.1_359548_360712_+	TIGR03265, PhnT2, putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein	NA|681aa|up_5|NZ_CP021806.1_360717_362760_+	TIGR03262, PhnU2, putative 2-aminoethylphosphonate ABC transporter, permease protein	NA|1113aa|up_4|NZ_CP021806.1_362944_366283_+	COG2931, COG2931, RTX toxins and related Ca2+-binding proteins [Secondary metabolites biosynthesis, transport, and catabolism]	NA|133aa|up_3|NZ_CP021806.1_366408_366807_+	NA	NA|261aa|up_2|NZ_CP021806.1_366895_367678_-	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms]	NA|384aa|up_1|NZ_CP021806.1_367665_368817_-	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms]	NA|131aa|up_0|NZ_CP021806.1_368907_369300_+	NA	NA|306aa|down_0|NZ_CP021806.1_376125_377043_+	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]	NA|414aa|down_1|NZ_CP021806.1_377122_378364_+	pfam04143, Sulf_transp, Sulphur transport	NA|309aa|down_2|NZ_CP021806.1_378388_379315_+	NA	NA|157aa|down_3|NZ_CP021806.1_379517_379988_+	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain	NA|181aa|down_4|NZ_CP021806.1_380190_380733_+	NA	NA|594aa|down_5|NZ_CP021806.1_381230_383012_+	PRK03659, PRK03659, glutathione-regulated potassium-efflux system protein KefB; Provisional	NA|742aa|down_6|NZ_CP021806.1_383092_385318_-	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]	NA|326aa|down_7|NZ_CP021806.1_385314_386292_-	COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion]	NA|208aa|down_8|NZ_CP021806.1_386288_386912_-	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion]	NA|297aa|down_9|NZ_CP021806.1_387111_388002_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]
GCF_002197145.1_ASM219714v1	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	2	373239-373320	2	CRISPRCasFinder	no		RT,csa3	Orphan	TCGGCGGCGGCGGCGGTGCGGGCGGCA	27	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,WYL,DEDDh,RT	NA|163aa|up_8|NZ_CP021806.1_357724_358213_+,NA|133aa|up_3|NZ_CP021806.1_366408_366807_+,NA|131aa|up_0|NZ_CP021806.1_368907_369300_+,NA|309aa|down_2|NZ_CP021806.1_378388_379315_+,NA|181aa|down_4|NZ_CP021806.1_380190_380733_+	NA|486aa|up_9|NZ_CP021806.1_356260_357718_+	TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase	NA|163aa|up_8|NZ_CP021806.1_357724_358213_+	NA	NA|341aa|up_7|NZ_CP021806.1_358436_359459_+	TIGR03261, phnS2, putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein	NA|388aa|up_6|NZ_CP021806.1_359548_360712_+	TIGR03265, PhnT2, putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein	NA|681aa|up_5|NZ_CP021806.1_360717_362760_+	TIGR03262, PhnU2, putative 2-aminoethylphosphonate ABC transporter, permease protein	NA|1113aa|up_4|NZ_CP021806.1_362944_366283_+	COG2931, COG2931, RTX toxins and related Ca2+-binding proteins [Secondary metabolites biosynthesis, transport, and catabolism]	NA|133aa|up_3|NZ_CP021806.1_366408_366807_+	NA	NA|261aa|up_2|NZ_CP021806.1_366895_367678_-	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms]	NA|384aa|up_1|NZ_CP021806.1_367665_368817_-	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms]	NA|131aa|up_0|NZ_CP021806.1_368907_369300_+	NA	NA|306aa|down_0|NZ_CP021806.1_376125_377043_+	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]	NA|414aa|down_1|NZ_CP021806.1_377122_378364_+	pfam04143, Sulf_transp, Sulphur transport	NA|309aa|down_2|NZ_CP021806.1_378388_379315_+	NA	NA|157aa|down_3|NZ_CP021806.1_379517_379988_+	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain	NA|181aa|down_4|NZ_CP021806.1_380190_380733_+	NA	NA|594aa|down_5|NZ_CP021806.1_381230_383012_+	PRK03659, PRK03659, glutathione-regulated potassium-efflux system protein KefB; Provisional	NA|742aa|down_6|NZ_CP021806.1_383092_385318_-	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]	NA|326aa|down_7|NZ_CP021806.1_385314_386292_-	COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion]	NA|208aa|down_8|NZ_CP021806.1_386288_386912_-	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion]	NA|297aa|down_9|NZ_CP021806.1_387111_388002_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]
GCF_002197145.1_ASM219714v1	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	3	373419-373523	3	CRISPRCasFinder	no		RT,csa3	Orphan	TCGGCGGCGGCGGCGGTGCGGGCGGCA	27	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,WYL,DEDDh,RT	NA|163aa|up_8|NZ_CP021806.1_357724_358213_+,NA|133aa|up_3|NZ_CP021806.1_366408_366807_+,NA|131aa|up_0|NZ_CP021806.1_368907_369300_+,NA|309aa|down_2|NZ_CP021806.1_378388_379315_+,NA|181aa|down_4|NZ_CP021806.1_380190_380733_+	NA|486aa|up_9|NZ_CP021806.1_356260_357718_+	TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase	NA|163aa|up_8|NZ_CP021806.1_357724_358213_+	NA	NA|341aa|up_7|NZ_CP021806.1_358436_359459_+	TIGR03261, phnS2, putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein	NA|388aa|up_6|NZ_CP021806.1_359548_360712_+	TIGR03265, PhnT2, putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein	NA|681aa|up_5|NZ_CP021806.1_360717_362760_+	TIGR03262, PhnU2, putative 2-aminoethylphosphonate ABC transporter, permease protein	NA|1113aa|up_4|NZ_CP021806.1_362944_366283_+	COG2931, COG2931, RTX toxins and related Ca2+-binding proteins [Secondary metabolites biosynthesis, transport, and catabolism]	NA|133aa|up_3|NZ_CP021806.1_366408_366807_+	NA	NA|261aa|up_2|NZ_CP021806.1_366895_367678_-	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms]	NA|384aa|up_1|NZ_CP021806.1_367665_368817_-	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms]	NA|131aa|up_0|NZ_CP021806.1_368907_369300_+	NA	NA|306aa|down_0|NZ_CP021806.1_376125_377043_+	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]	NA|414aa|down_1|NZ_CP021806.1_377122_378364_+	pfam04143, Sulf_transp, Sulphur transport	NA|309aa|down_2|NZ_CP021806.1_378388_379315_+	NA	NA|157aa|down_3|NZ_CP021806.1_379517_379988_+	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain	NA|181aa|down_4|NZ_CP021806.1_380190_380733_+	NA	NA|594aa|down_5|NZ_CP021806.1_381230_383012_+	PRK03659, PRK03659, glutathione-regulated potassium-efflux system protein KefB; Provisional	NA|742aa|down_6|NZ_CP021806.1_383092_385318_-	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]	NA|326aa|down_7|NZ_CP021806.1_385314_386292_-	COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion]	NA|208aa|down_8|NZ_CP021806.1_386288_386912_-	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion]	NA|297aa|down_9|NZ_CP021806.1_387111_388002_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]
