The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP022059	Enterococcus faecalis strain FDAARGOS_338 chromosome, complete genome	2861022	60472	116041	2861022	transposase	Bacillus_phage(25.0%)	49	NA	NA
WP_010783541.1|60472_61432_-|transposase	IS30-like element IS6770 family transposase	transposase	NA	NA	NA	NA
WP_002363103.1|61817_62246_-	NusG domain II-containing protein	NA	NA	NA	NA	NA
WP_002363099.1|65094_65244_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_002363097.1|65264_65642_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002297318.1|65672_65852_-	50S ribosomal protein L32	NA	NA	NA	NA	NA
WP_002363096.1|65866_66127_-	30S ribosomal protein S14	NA	NA	NA	NA	NA
WP_002381225.1|66649_68293_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.4	4.7e-29
WP_002381224.1|68374_70129_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	24.5	2.8e-24
WP_002363093.1|70238_70808_-	MptD family putative ECF transporter S component	NA	NA	NA	NA	NA
WP_010774431.1|70825_72241_-	energy-coupling factor ABC transporter ATP-binding protein	NA	A0A1V0SGN0	Hokovirus	26.4	4.5e-20
WP_002358579.1|72251_72920_-	cobalt transporter	NA	NA	NA	NA	NA
WP_071623368.1|73050_73635_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002297302.1|73963_74197_-	iron-dependent repressor	NA	NA	NA	NA	NA
WP_002364865.1|74211_75162_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002364866.1|75158_76001_-	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_002363088.1|76002_76722_-	metal ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	32.7	1.2e-18
WP_000221326.1|76979_77939_+|transposase	IS30-like element IS6770 family transposase	transposase	NA	NA	NA	NA
WP_002331389.1|79319_79769_+	DIP1984 family protein	NA	NA	NA	NA	NA
WP_002384854.1|80671_82015_-	PFL family protein	NA	NA	NA	NA	NA
WP_002355434.1|82029_82296_-	ACT domain-containing protein	NA	NA	NA	NA	NA
WP_002334632.1|82398_83067_-	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA	NA
WP_105577382.1|83412_84255_+	MATE family efflux transporter	NA	NA	NA	NA	NA
WP_002307675.1|84839_85136_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_002381221.1|85128_85593_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_002364876.1|88077_88461_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002386124.1|88701_89316_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002381219.1|89459_90020_+	TetR/AcrR family transcriptional regulator C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_002381218.1|90095_91295_-	MFS transporter	NA	NA	NA	NA	NA
WP_002381217.1|91737_92229_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002331205.1|92255_93401_-	galactonate dehydratase	NA	Q6A202	Oenococcus_phage	33.4	1.2e-52
WP_002386123.1|93415_94783_-	PTS galactitol transporter subunit IIC	NA	NA	NA	NA	NA
WP_002331203.1|94807_95086_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_002326530.1|95104_95563_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_002331202.1|95574_96195_-	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA	NA
WP_002331201.1|96205_98248_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_002364885.1|98529_99765_-|transposase	IS256 family transposase	transposase	NA	NA	NA	NA
WP_002367943.1|99761_100346_-	DUF262 domain-containing protein	NA	NA	NA	NA	NA
WP_105577383.1|100535_103568_-	type I restriction endonuclease subunit R	NA	A0A220A398	Liberibacter_phage	23.3	3.1e-18
WP_010783539.1|103797_104757_+|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
WP_002363087.1|105761_107252_-	xylulokinase	NA	NA	NA	NA	NA
WP_002364888.1|107313_108621_-	xylose isomerase	NA	NA	NA	NA	NA
WP_002358554.1|108725_109133_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_002363085.1|109144_109627_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_002358552.1|109651_110464_-	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA	NA
WP_002358551.1|110456_111242_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_002384845.1|111241_113317_-	family 31 glucosidase	NA	NA	NA	NA	NA
WP_002358549.1|113673_114840_+	ROK family transcriptional regulator	NA	NA	NA	NA	NA
WP_002367939.1|115348_115624_+|transposase	transposase	transposase	A0A0N9S8A3	Staphylococcus_phage	40.9	1.1e-10
WP_002370911.1|115729_116041_+|transposase	IS3 family transposase	transposase	A0A0N9SIX5	Staphylococcus_phage	65.6	1.6e-23
>prophage 2
NZ_CP022059	Enterococcus faecalis strain FDAARGOS_338 chromosome, complete genome	2861022	129849	200337	2861022	protease,integrase,transposase	Streptococcus_phage(38.89%)	64	169248:169264	204158:204174
WP_000997695.1|129849_131028_-|transposase	IS256-like element ISEf1 family transposase	transposase	NA	NA	NA	NA
WP_002364905.1|131193_132402_-	YSIRK-targeted surface antigen transcriptional regulator	NA	NA	NA	NA	NA
WP_000997695.1|132580_133759_+|transposase	IS256-like element ISEf1 family transposase	transposase	NA	NA	NA	NA
WP_105577384.1|133947_139071_-	YSIRK-type signal peptide-containing protein	NA	NA	NA	NA	NA
WP_002358518.1|139345_139882_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA	NA
WP_002358517.1|139910_140102_-	DUF2273 domain-containing protein	NA	NA	NA	NA	NA
WP_002380049.1|140953_141835_-	peptidase S41	NA	NA	NA	NA	NA
WP_002364288.1|143823_144273_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002363055.1|144305_144578_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002363054.1|144919_145129_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002363053.1|145188_145413_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002381208.1|145406_145694_-	hypothetical protein	NA	NA	NA	NA	NA
WP_105577385.1|145710_146307_-	recombinase family protein	NA	A0A1J1J8Z4	Escherichia_phage	38.1	1.7e-21
WP_002381207.1|146444_147287_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002386109.1|148096_148279_-	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA	NA
WP_002381206.1|148530_148941_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002364917.1|149051_149357_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002355428.1|149801_150776_-	choloylglycine hydrolase family protein	NA	M1H001	Paramecium_bursaria_Chlorella_virus	31.6	2.1e-24
WP_002381204.1|154393_154714_+	recombinase family protein	NA	A0A219Y912	Aeromonas_phage	45.1	3.2e-19
WP_002384822.1|154701_154980_+	recombinase family protein	NA	NA	NA	NA	NA
WP_002363043.1|154927_155536_-	zeta toxin family protein	NA	NA	NA	NA	NA
WP_002355424.1|155972_156872_-	aldose 1-epimerase family protein	NA	NA	NA	NA	NA
WP_002381203.1|156892_157165_-	DUF3884 family protein	NA	NA	NA	NA	NA
WP_002290548.1|157187_158594_-	6-phospho-beta-galactosidase	NA	NA	NA	NA	NA
WP_002381202.1|158740_160447_-	PTS transporter subunit EIIC	NA	NA	NA	NA	NA
WP_002290550.1|160446_160764_-	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA	NA
WP_002355420.1|160791_161772_-	tagatose-bisphosphate aldolase	NA	NA	NA	NA	NA
WP_002363040.1|161774_162707_-	tagatose-6-phosphate kinase	NA	NA	NA	NA	NA
WP_002345825.1|162717_163233_-	galactose-6-phosphate isomerase subunit LacB	NA	NA	NA	NA	NA
WP_002355418.1|163249_163675_-	galactose-6-phosphate isomerase subunit LacA	NA	NA	NA	NA	NA
WP_002355416.1|164162_164930_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA	NA
WP_002363039.1|164934_165435_+	HAD family hydrolase	NA	NA	NA	NA	NA
WP_071623404.1|165479_165908_+|integrase	tyrosine-type recombinase/integrase	integrase	W6LMU7	Streptococcus_phage	35.7	5.8e-16
WP_002355414.1|165987_166296_-	zeta toxin family protein	NA	NA	NA	NA	NA
WP_002326825.1|166297_166570_-	antitoxin	NA	A0A1X9I6E5	Streptococcus_phage	96.7	5.4e-07
WP_002363035.1|166586_166796_-	peptide-binding protein	NA	A0A1X9I6D5	Streptococcus_phage	95.7	1.3e-29
WP_002363034.1|166872_167769_-	ParA family protein	NA	A0A1X9I765	Streptococcus_phage	98.6	6.3e-153
WP_002363033.1|168157_169441_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
169248:169264	attL	GCTTTATTAAAAAATTG	NA	NA	NA	NA
WP_002355406.1|169457_170384_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002355404.1|170560_171289_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002355397.1|173864_175979_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	K4FB40	Cronobacter_phage	38.7	5.9e-117
WP_002355395.1|176397_176634_-	helix-turn-helix transcriptional regulator	NA	A0A097PBE6	Streptococcus_pyogenes_phage	50.7	1.6e-12
WP_002386104.1|176734_176887_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002381200.1|177188_178448_+|transposase	IS256 family transposase	transposase	NA	NA	NA	NA
WP_002355392.1|178492_179434_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_002355391.1|179552_179894_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002389371.1|180009_180363_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_157408169.1|180363_180855_-|transposase	transposase	transposase	A0A1S5SBP9	Streptococcus_phage	37.9	9.1e-21
WP_042341262.1|181037_181298_-	DUF3102 domain-containing protein	NA	J7KDG2	Streptococcus_phage	49.4	1.4e-12
WP_002355388.1|181637_182228_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002384811.1|182301_182466_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002355386.1|182492_183116_+	cysteine hydrolase	NA	NA	NA	NA	NA
WP_002355383.1|183253_184603_+	FAD-dependent oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	51.4	5.8e-118
WP_100815082.1|184985_186357_+|transposase	IS3-like element ISLla3 family transposase	transposase	A0A1B1P773	Bacillus_phage	43.1	3.5e-54
WP_002355377.1|186652_187249_-	HTH domain-containing protein	NA	NA	NA	NA	NA
WP_000221326.1|187422_188382_-|transposase	IS30-like element IS6770 family transposase	transposase	NA	NA	NA	NA
WP_002355375.1|188539_189733_-	glycosyltransferase	NA	M1H5V3	Paramecium_bursaria_Chlorella_virus	32.4	1.1e-43
WP_002386101.1|189769_190957_-	nucleotide sugar dehydrogenase	NA	M1HV26	Paramecium_bursaria_Chlorella_virus	48.6	4.2e-96
WP_002355370.1|192740_193340_-|integrase	tyrosine-type recombinase/integrase	integrase	D2XR58	Bacillus_phage	35.6	2.5e-28
WP_002335374.1|193864_194803_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
WP_002355369.1|194828_195866_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_002356268.1|197240_198557_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	36.8	5.2e-55
WP_002355366.1|198893_199124_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002355365.1|199167_200337_+|integrase	site-specific integrase	integrase	A0A1B0T6A8	Bacillus_phage	28.9	3.6e-31
204158:204174	attR	GCTTTATTAAAAAATTG	NA	NA	NA	NA
>prophage 3
NZ_CP022059	Enterococcus faecalis strain FDAARGOS_338 chromosome, complete genome	2861022	725092	743838	2861022	integrase	Streptococcus_phage(94.74%)	21	724841:724854	742627:742640
724841:724854	attL	AATTTACTACTTAT	NA	NA	NA	NA
WP_000420682.1|725092_725407_+	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
WP_000985015.1|725422_725809_+	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_000813488.1|725837_727223_+	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
WP_000879507.1|727225_727378_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000398284.1|727400_728606_+	replication initiation factor domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
WP_001009056.1|728648_728870_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
WP_000342539.1|728986_729484_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
WP_000506270.1|729458_729965_+	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
WP_000331160.1|729948_732396_+	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
WP_000804748.1|732398_734576_+	membrane protein	NA	A0A1S5SF30	Streptococcus_phage	100.0	0.0e+00
WP_000769868.1|734572_735574_+	lysozyme family protein	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
WP_001224318.1|735570_736503_+	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	99.4	3.1e-171
WP_001814923.1|736747_736864_+	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
WP_105577399.1|736879_738799_+	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	98.6	0.0e+00
WP_000336323.1|738917_739085_+	cysteine-rich KTR domain-containing protein	NA	D0R0F6	Streptococcus_phage	68.0	1.6e-14
WP_001227347.1|739144_739498_-	helix-turn-helix domain-containing protein	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
WP_000804885.1|740002_740425_+	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
WP_000857133.1|740421_740652_+	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
WP_000814511.1|741112_741316_+	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
WP_001291561.1|741397_742615_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
WP_002354809.1|742902_743838_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	29.4	2.4e-22
742627:742640	attR	AATTTACTACTTAT	NA	NA	NA	NA
>prophage 4
NZ_CP022059	Enterococcus faecalis strain FDAARGOS_338 chromosome, complete genome	2861022	1078702	1088442	2861022		Streptococcus_phage(57.14%)	11	NA	NA
WP_002356366.1|1078702_1079341_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	53.8	2.1e-54
WP_002356367.1|1079360_1079690_+	cyclic-di-AMP receptor	NA	NA	NA	NA	NA
WP_002381409.1|1079691_1080642_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	33.0	4.8e-34
WP_002356371.1|1080758_1081598_+	stage 0 sporulation family protein	NA	NA	NA	NA	NA
WP_002381410.1|1081590_1081938_+	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	37.6	1.2e-16
WP_002359438.1|1082049_1082922_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	57.2	1.1e-80
WP_002356375.1|1082936_1083599_+	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	31.1	6.7e-19
WP_105577414.1|1083582_1084341_+	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA	NA
WP_002381412.1|1084466_1085585_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_002356379.1|1085629_1086226_-	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A0C5K925	Enterococcus_phage	56.4	6.0e-51
WP_002382497.1|1086258_1088442_-	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	66.8	4.0e-286
>prophage 5
NZ_CP022059	Enterococcus faecalis strain FDAARGOS_338 chromosome, complete genome	2861022	1211631	1219548	2861022		Planktothrix_phage(16.67%)	10	NA	NA
WP_002355794.1|1211631_1212690_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.1	2.0e-17
WP_002355795.1|1212689_1213646_+	ATP-binding cassette domain-containing protein	NA	A0A1J0FA64	Only_Syngen_Nebraska_virus	23.9	3.2e-06
WP_002355796.1|1213686_1214757_+	helix-turn-helix domain-containing protein	NA	A0A288TXV8	Enterococcus_phage	49.0	7.6e-89
WP_002355797.1|1215155_1215677_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	33.3	3.0e-14
WP_002355798.1|1215790_1215991_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_002355799.1|1216051_1216411_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_002386182.1|1216457_1216838_-	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA	NA
WP_002355801.1|1216905_1217265_+	DUF1304 domain-containing protein	NA	NA	NA	NA	NA
WP_002355803.1|1217841_1218357_+	GrpB family protein	NA	A0A2K5B2B6	Erysipelothrix_phage	48.8	1.7e-38
WP_002355804.1|1218372_1219548_-	SulP family inorganic anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	47.7	2.5e-85
>prophage 6
NZ_CP022059	Enterococcus faecalis strain FDAARGOS_338 chromosome, complete genome	2861022	1577324	1585925	2861022	tail	Staphylococcus_phage(28.57%)	12	NA	NA
WP_002357859.1|1577324_1579721_+	translation initiation factor IF-2	NA	A0A2H4UTS4	Bodo_saltans_virus	24.1	1.7e-19
WP_002357858.1|1579745_1580096_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_002393873.1|1580178_1580409_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002382232.1|1580468_1580954_-	toxin	NA	A0A097BY56	Enterococcus_phage	70.5	4.4e-60
WP_002357856.1|1580988_1581471_-	helix-turn-helix transcriptional regulator	NA	R9QTP6	Staphylococcus_phage	48.6	1.2e-20
WP_002392532.1|1581867_1582623_+	DnaD domain protein	NA	A0A0K0MX39	Streptococcus_phage	56.0	8.7e-31
WP_002381951.1|1582641_1583484_+	ATP-binding protein	NA	A0A0P0I3L9	Lactobacillus_phage	31.0	2.6e-31
WP_002357852.1|1583550_1583943_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002357851.1|1583962_1584370_+	RinA family phage transcriptional activator	NA	NA	NA	NA	NA
WP_002382237.1|1584591_1585008_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002381948.1|1585020_1585533_+|tail	phage major tail protein, TP901-1 family	tail	W6LP72	Streptococcus_phage	49.4	8.8e-35
WP_002357848.1|1585565_1585925_+|tail	tail assembly chaperone	tail	A0A0F6N4J9	Staphylococcus_phage	32.2	7.6e-09
>prophage 7
NZ_CP022059	Enterococcus faecalis strain FDAARGOS_338 chromosome, complete genome	2861022	2156834	2209325	2861022	holin,head,portal,integrase,tail,terminase,capsid,tRNA	Enterococcus_phage(38.24%)	62	2172237:2172255	2209381:2209399
WP_002357083.1|2156834_2158604_-|tRNA	aspartate--tRNA ligase	tRNA	A0A2K9L424	Tupanvirus	30.3	3.0e-13
WP_002381748.1|2158621_2159923_-|tRNA	histidine--tRNA ligase	tRNA	A0A2I2L577	Orpheovirus	26.4	1.3e-21
WP_002357080.1|2160280_2160727_-|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_002381746.1|2160750_2162964_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A2I2L310	Orpheovirus	38.0	1.3e-10
WP_002357078.1|2163178_2163931_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_002357075.1|2163932_2164880_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA	NA
WP_002398619.1|2164895_2165390_-	DUF3013 family protein	NA	NA	NA	NA	NA
WP_002364174.1|2165337_2166015_-	DNA-3-methyladenine glycosylase	NA	NA	NA	NA	NA
WP_002381744.1|2166143_2167421_+	replication-associated recombination protein A	NA	A0A127AWE7	Bacillus_phage	49.9	3.1e-105
WP_002380425.1|2167748_2168027_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002357065.1|2168203_2168677_+	universal stress protein	NA	NA	NA	NA	NA
WP_002362052.1|2168788_2169976_-	acetate kinase	NA	NA	NA	NA	NA
WP_002357063.1|2170000_2171008_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_002381743.1|2171136_2171490_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002357060.1|2171489_2171924_-	ComGF family competence protein	NA	NA	NA	NA	NA
WP_170310356.1|2171913_2172285_-	type II secretion system protein	NA	NA	NA	NA	NA
2172237:2172255	attL	CCACTCCCCATCTGAAATT	NA	NA	NA	NA
WP_002357056.1|2173039_2173981_-	ferrochelatase	NA	NA	NA	NA	NA
WP_002378444.1|2174696_2174969_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002357053.1|2175040_2175241_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	80.3	1.6e-24
WP_002381740.1|2176087_2177347_-	LysM peptidoglycan-binding domain-containing protein	NA	C9E2L1	Enterococcus_phage	89.2	3.3e-208
WP_002378446.1|2177359_2177740_-|holin	phage holin family protein	holin	A0A097QQ04	Enterococcus_phage	100.0	1.1e-61
WP_002368228.1|2177750_2177873_-	XkdX family protein	NA	NA	NA	NA	NA
WP_002363385.1|2177874_2178270_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002363384.1|2178288_2178741_-	hypothetical protein	NA	C0LZY6	Enterococcus_phage	40.3	3.3e-17
WP_002363383.1|2178757_2179498_-	hypothetical protein	NA	A0A1X9IGH6	Lactococcus_phage	34.6	1.2e-27
WP_002378447.1|2179503_2180949_-|tail	phage tail protein	tail	A0A1X9IGI5	Lactococcus_phage	39.2	9.0e-77
WP_002363380.1|2180948_2181671_-	hypothetical protein	NA	C5IUK4	Streptococcus_phage	39.2	1.2e-42
WP_002398616.1|2181667_2186122_-|tail	phage tail tape measure protein	tail	M1PKM6	Streptococcus_phage	49.0	2.2e-89
WP_002364305.1|2186108_2186414_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002363376.1|2186482_2186881_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002381737.1|2186943_2187252_-	hypothetical protein	NA	L0P8M2	Lactobacillus_phage	77.1	2.7e-07
WP_002381736.1|2187254_2187860_-|tail	phage major tail protein, TP901-1 family	tail	NA	NA	NA	NA
WP_002381735.1|2187879_2188272_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002381734.1|2188268_2188607_-	HK97 gp10 family phage protein	NA	A0A1L2K255	Streptococcus_phage	38.7	5.3e-12
WP_002364301.1|2188603_2188879_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002363369.1|2188875_2189208_-|head,tail	phage head-tail connector protein	head,tail	A0A1W6JNH7	Staphylococcus_phage	38.5	2.7e-08
WP_002381733.1|2189278_2190175_-	hypothetical protein	NA	U3PDP8	Lactobacillus_phage	50.2	2.3e-70
WP_002381732.1|2190187_2190841_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002363365.1|2190945_2191872_-|capsid	minor capsid protein	capsid	A0A097QPZ9	Enterococcus_phage	98.0	1.8e-131
WP_002381731.1|2191864_2193349_-|portal	phage portal protein	portal	A0A097QPZ5	Enterococcus_phage	99.6	3.8e-139
WP_002381730.1|2193348_2194632_-|terminase	PBSX family phage terminase large subunit	terminase	Q9AZ91	Lactobacillus_prophage	65.0	5.1e-156
WP_002364295.1|2194612_2195047_-|terminase	terminase small subunit	terminase	A7J290	Streptococcus_phage	64.5	1.8e-44
WP_002400650.1|2195078_2195309_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002357020.1|2196294_2197284_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002357018.1|2197985_2198402_-	autolysin	NA	D2IZ17	Enterococcus_phage	99.3	1.4e-67
WP_002357016.1|2199309_2199744_-	RusA family crossover junction endodeoxyribonuclease	NA	D2IYU2	Enterococcus_phage	81.4	1.9e-59
WP_002357015.1|2199752_2200052_-	MazG-like family protein	NA	D2IZY1	Enterococcus_phage	89.9	5.1e-43
WP_002381727.1|2200052_2200355_-	hypothetical protein	NA	D2IZR3	Enterococcus_phage	96.0	2.2e-46
WP_002381726.1|2200358_2201240_-	helix-turn-helix domain-containing protein	NA	A0A2P1CD59	Lactobacillus_phage	58.5	1.1e-24
WP_002357010.1|2201239_2201440_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002364344.1|2201444_2202086_-	hypothetical protein	NA	U5U4M2	Lactobacillus_phage	36.0	4.8e-30
WP_002381724.1|2202090_2202825_-	ERF family protein	NA	A0A1W6JNQ5	Staphylococcus_phage	29.9	2.3e-20
WP_002357006.1|2203355_2203910_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002381721.1|2204567_2204777_-	hypothetical protein	NA	D2IZ57	Enterococcus_phage	75.8	1.8e-18
WP_002357001.1|2204831_2205020_+	YegP family protein	NA	NA	NA	NA	NA
WP_002381720.1|2205045_2205771_-	phage regulatory protein	NA	A0A0P0IDD0	Lactobacillus_phage	54.7	2.2e-31
WP_002381719.1|2205809_2206121_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002364354.1|2206131_2206308_-	helix-turn-helix transcriptional regulator	NA	D2IZW2	Enterococcus_phage	65.5	1.7e-14
WP_002364355.1|2206619_2206952_+	helix-turn-helix transcriptional regulator	NA	A0A097QQ00	Enterococcus_phage	69.1	2.6e-35
WP_002381718.1|2206968_2207313_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A097QQ08	Enterococcus_phage	70.8	4.7e-40
WP_002381717.1|2207348_2208077_+	ion transporter	NA	A0A1B0Y2S3	Lactobacillus_phage	49.5	3.2e-22
WP_002381716.1|2208176_2209325_+|integrase	site-specific integrase	integrase	A0A1C8E994	Bacillus_phage	30.7	2.3e-38
2209381:2209399	attR	CCACTCCCCATCTGAAATT	NA	NA	NA	NA
>prophage 8
NZ_CP022059	Enterococcus faecalis strain FDAARGOS_338 chromosome, complete genome	2861022	2273233	2380011	2861022	holin,head,portal,integrase,tail,terminase,capsid,tRNA,protease	Enterococcus_phage(73.44%)	119	2319423:2319449	2360400:2360426
WP_002381694.1|2273233_2274163_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_002381693.1|2274163_2274910_-	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	40.4	8.1e-13
WP_002381691.1|2276832_2277792_-	GDP-mannose 4,6-dehydratase	NA	A0A1V0SKV4	Klosneuvirus	36.2	1.0e-47
WP_002381690.1|2277879_2278785_-	hypothetical protein	NA	NA	NA	NA	NA
WP_105577448.1|2278781_2280248_-	O-antigen polysaccharide polymerase Wzy family protein	NA	NA	NA	NA	NA
WP_105577449.1|2280532_2283412_-	glycosyl hydrolase family 25	NA	U3PJ04	Lactobacillus_phage	34.2	2.8e-21
WP_002381686.1|2283440_2283839_-	glycerol-3-phosphate cytidylyltransferase	NA	A0A1V0SGE7	Hokovirus	41.5	2.1e-20
WP_002398591.1|2283844_2284699_-	LicD family protein	NA	A0A1V0SD50	Indivirus	50.9	3.6e-09
WP_002381684.1|2284790_2285924_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_002381683.1|2285930_2287469_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002381682.1|2287609_2288584_-	glycosyltransferase	NA	A0A0F7L2F7	uncultured_marine_virus	34.3	2.5e-06
WP_002398590.1|2288570_2289644_-	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA	NA
WP_002374463.1|2289656_2290361_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_002381680.1|2290593_2291436_-	LicD family protein	NA	NA	NA	NA	NA
WP_002381679.1|2291451_2292285_-	glycosyltransferase	NA	F2Y1U7	Organic_Lake_phycodnavirus	31.6	4.1e-13
WP_002356909.1|2292404_2293802_-	sugar transferase	NA	NA	NA	NA	NA
WP_002378510.1|2293907_2295209_-	EpaQ family protein	NA	NA	NA	NA	NA
WP_002398588.1|2295237_2297241_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002381678.1|2297241_2299383_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_002381677.1|2299394_2302538_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_002356901.1|2302527_2303745_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	24.0	1.5e-08
WP_002356900.1|2303757_2304552_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_002356899.1|2304799_2305141_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002356898.1|2305214_2305565_-	DUF2304 domain-containing protein	NA	NA	NA	NA	NA
WP_002359897.1|2305564_2306290_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_002356895.1|2306348_2307191_-	dTDP-4-dehydrorhamnose reductase	NA	A0A1D8EQE2	Escherichia_phage	33.2	4.2e-26
WP_002359895.1|2307283_2308312_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	41.9	1.9e-68
WP_002356893.1|2308336_2308909_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	50.3	2.4e-41
WP_002364387.1|2308921_2309788_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	63.9	6.1e-105
WP_002362119.1|2309909_2310623_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_002381673.1|2310626_2311454_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_002359892.1|2311453_2312242_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_002366956.1|2312363_2313500_-	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA	NA
WP_002383768.1|2313610_2314519_-	YihY/virulence factor BrkB family protein	NA	NA	NA	NA	NA
WP_002381672.1|2314534_2315299_-	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
WP_002356885.1|2315473_2315917_+	flavodoxin	NA	NA	NA	NA	NA
WP_002356884.1|2315991_2316465_-	tryptophan-rich sensory protein	NA	NA	NA	NA	NA
WP_002356883.1|2316622_2317195_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002362125.1|2317445_2318684_+	aminopeptidase	NA	NA	NA	NA	NA
WP_002381671.1|2318943_2319324_+	PH domain-containing protein	NA	A6N235	Microbacterium_phage	33.0	2.5e-10
2319423:2319449	attL	TCAGACACATGGCGGCACTTGCTTAGT	NA	NA	NA	NA
WP_085370454.1|2319694_2320276_+	DUF4950 domain-containing protein	NA	C9E2L5	Enterococcus_phage	99.5	4.2e-65
WP_105577450.1|2320632_2322135_+	glucosyltransferase domain-containing protein	NA	C9E2L4	Enterococcus_phage	99.6	6.3e-275
WP_105577451.1|2322198_2323491_-	peptidoglycan DD-metalloendopeptidase family protein	NA	C9E2L3	Enterococcus_phage	100.0	1.3e-252
WP_002369082.1|2323552_2323933_-	hypothetical protein	NA	C9E2L2	Enterococcus_phage	100.0	1.1e-63
WP_073437768.1|2323945_2325205_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A0S2MYF3	Enterococcus_phage	93.6	3.7e-228
WP_002381666.1|2325210_2325414_-|holin	phage holin	holin	C9E2L0	Enterococcus_phage	100.0	1.2e-30
WP_002381665.1|2325410_2325638_-	hypothetical protein	NA	A0A0S2MYL7	Enterococcus_phage	98.6	1.3e-30
WP_105577452.1|2325711_2327475_-	hypothetical protein	NA	C9E2K8	Enterococcus_phage	99.8	1.8e-268
WP_002369077.1|2327485_2327659_-	hypothetical protein	NA	A0A097BYC2	Enterococcus_phage	100.0	3.1e-24
WP_002389090.1|2327659_2329675_-|tail	phage tail protein	tail	C9E2K6	Enterococcus_phage	100.0	0.0e+00
WP_105577453.1|2329691_2330621_-|tail	phage tail family protein	tail	C9E2K5	Enterococcus_phage	99.4	1.5e-178
WP_105577454.1|2330621_2334029_-	tape measure protein	NA	A0A0S2MYN1	Enterococcus_phage	97.8	0.0e+00
WP_002381661.1|2334044_2334302_-	hypothetical protein	NA	A0A097BYA4	Enterococcus_phage	100.0	7.0e-41
WP_002389853.1|2334394_2334745_-|tail	tail assembly chaperone	tail	A0A097BYB6	Enterococcus_phage	100.0	3.3e-57
WP_048949752.1|2334800_2335259_-	hypothetical protein	NA	C9E2K1	Enterococcus_phage	95.4	4.3e-73
WP_002373072.1|2335336_2335867_-|tail	phage major tail protein, TP901-1 family	tail	A0A097BY59	Enterococcus_phage	99.4	4.3e-93
WP_002369068.1|2335882_2336272_-	hypothetical protein	NA	A0A0S2MYG3	Enterococcus_phage	99.2	8.6e-67
WP_002373070.1|2336268_2336649_-	hypothetical protein	NA	A0A0S2MYE9	Enterococcus_phage	99.2	7.9e-65
WP_002381656.1|2336623_2336959_-	hypothetical protein	NA	A0A097BYB2	Enterococcus_phage	96.4	7.7e-56
WP_002373068.1|2336955_2337288_-|head,tail	phage head-tail connector protein	head,tail	A0A097BY55	Enterococcus_phage	100.0	4.2e-54
WP_002381655.1|2337361_2338294_-|capsid	phage major capsid protein	capsid	A0A1B1V000	Enterococcus_phage	99.7	8.7e-174
WP_002373065.1|2338306_2338906_-	DUF4355 domain-containing protein	NA	A0A097BY91	Enterococcus_phage	98.5	3.5e-75
WP_002381654.1|2339100_2339322_-	hypothetical protein	NA	A0A097BYA7	Enterococcus_phage	98.6	1.9e-34
WP_002381653.1|2339318_2339588_-	hypothetical protein	NA	A0A097BY49	Enterococcus_phage	98.9	6.4e-45
WP_002381652.1|2339588_2340527_-|capsid	minor capsid protein	capsid	A0A097BY50	Enterococcus_phage	98.1	4.5e-170
WP_002381651.1|2340531_2342070_-|portal	phage portal protein	portal	A0A097BY86	Enterococcus_phage	99.2	1.8e-285
WP_002381650.1|2342083_2343472_-|terminase	terminase	terminase	A0A097BY88	Enterococcus_phage	99.6	9.4e-273
WP_002398576.1|2343464_2343938_-|terminase	terminase small subunit	terminase	Q9XJG1	Enterococcus_phage	51.4	7.4e-20
WP_105577455.1|2344006_2344651_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002395898.1|2344901_2345321_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_105577456.1|2345321_2345534_-	hypothetical protein	NA	D2IZL5	Enterococcus_phage	87.7	4.3e-28
WP_105577457.1|2345527_2345845_-	replicase	NA	NA	NA	NA	NA
WP_105577458.1|2345845_2346349_-	DUF1642 domain-containing protein	NA	A0A0E3T929	Enterococcus_phage	42.7	3.5e-20
WP_105577459.1|2346345_2346612_-	hypothetical protein	NA	NA	NA	NA	NA
WP_105577460.1|2346608_2346803_-	hypothetical protein	NA	NA	NA	NA	NA
WP_192575138.1|2346799_2346961_-	hypothetical protein	NA	A0A0S2MYB7	Enterococcus_phage	88.7	1.2e-17
WP_105577461.1|2346957_2347356_-	hypothetical protein	NA	D2IZY8	Enterococcus_phage	67.4	2.7e-39
WP_105577462.1|2347339_2347519_-	hypothetical protein	NA	D2IZY7	Enterococcus_phage	93.2	6.4e-25
WP_002359516.1|2347541_2347748_-	hypothetical protein	NA	A0A1B1V001	Enterococcus_phage	96.8	7.4e-25
WP_105577463.1|2347767_2348097_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033598033.1|2348109_2348637_-	single-stranded DNA-binding protein	NA	A0A097PAQ3	Streptococcus_pyogenes_phage	54.9	1.2e-42
WP_002381633.1|2348626_2348935_-	MazG-like family protein	NA	D2IZR4	Enterococcus_phage	90.9	1.6e-44
WP_105577464.1|2348934_2349741_-	helix-turn-helix domain-containing protein	NA	A0A2D1GQ66	Lysinibacillus_phage	53.3	2.3e-21
WP_083578492.1|2349744_2350386_-	hypothetical protein	NA	U5U4M2	Lactobacillus_phage	35.1	1.8e-29
WP_105577465.1|2350382_2351321_-	DUF1351 domain-containing protein	NA	A0A0S2MYB3	Enterococcus_phage	47.8	1.4e-67
WP_105577466.1|2351320_2352064_-	ERF family protein	NA	A0A2H4IYS6	uncultured_Caudovirales_phage	33.2	1.8e-25
WP_010828389.1|2352149_2352452_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025188165.1|2352617_2352803_+	DUF1508 domain-containing protein	NA	NA	NA	NA	NA
WP_105577467.1|2353204_2353663_+	hypothetical protein	NA	NA	NA	NA	NA
WP_105577468.1|2353725_2353926_-	hypothetical protein	NA	D2J031	Enterococcus_phage	45.9	1.0e-07
WP_105577469.1|2354449_2354974_+	hypothetical protein	NA	NA	NA	NA	NA
WP_105577470.1|2355085_2355334_-	hypothetical protein	NA	A0A0S2MYC6	Enterococcus_phage	91.5	2.4e-38
WP_002389123.1|2355349_2356069_-	phage antirepressor KilAC domain-containing protein	NA	C9E2M3	Enterococcus_phage	100.0	4.0e-134
WP_002389146.1|2356150_2356384_-	DUF739 family protein	NA	A0A0S2MYC3	Enterococcus_phage	100.0	7.8e-39
WP_002389244.1|2356542_2357115_+	helix-turn-helix domain-containing protein	NA	C9E2M1	Enterococcus_phage	100.0	1.1e-99
WP_002406281.1|2357089_2357605_+	hypothetical protein	NA	A0A0S2MYA6	Enterococcus_phage	100.0	1.0e-86
WP_105577471.1|2357692_2358247_+	hypothetical protein	NA	C9E2L9	Enterococcus_phage	99.5	4.3e-96
WP_002389192.1|2358288_2358489_+	hypothetical protein	NA	A0A0S2MYA2	Enterococcus_phage	100.0	7.4e-30
WP_104832832.1|2358549_2359122_+	hypothetical protein	NA	A0A1B1UZZ9	Enterococcus_phage	97.4	2.2e-82
WP_105577472.1|2359188_2360325_+|integrase	site-specific integrase	integrase	A0A0S2MYI6	Enterococcus_phage	99.2	5.4e-210
WP_002374442.1|2360518_2361040_-	nucleoside deaminase	NA	NA	NA	NA	NA
2360400:2360426	attR	TCAGACACATGGCGGCACTTGCTTAGT	NA	NA	NA	NA
WP_002398570.1|2361117_2361969_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002379617.1|2362025_2362871_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_002356871.1|2362897_2363236_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002384290.1|2363319_2364024_-	zinc metallopeptidase	NA	NA	NA	NA	NA
WP_002398569.1|2364222_2364576_+	YxeA family protein	NA	NA	NA	NA	NA
WP_002356866.1|2364613_2365618_-	nucleoid-associated protein	NA	A0A090D855	Clostridium_phage	22.3	8.6e-10
WP_002383776.1|2365745_2367212_-	PTS system trehalose-specific EIIBC component	NA	NA	NA	NA	NA
WP_002366964.1|2367424_2367805_+	VOC family protein	NA	NA	NA	NA	NA
WP_002356863.1|2367826_2368309_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_002381614.1|2368352_2369453_-	FUSC family protein	NA	NA	NA	NA	NA
WP_002381613.1|2369625_2371767_+	GH92 family glycosyl hydrolase	NA	NA	NA	NA	NA
WP_002381612.1|2371807_2373289_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_002398568.1|2373300_2375031_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_002381610.1|2374984_2375620_-	DUF624 domain-containing protein	NA	NA	NA	NA	NA
WP_002369012.1|2375690_2377157_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_002359877.1|2377180_2378104_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_002356852.1|2378115_2379072_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_002398566.1|2379423_2380011_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
