assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002209425.1_ASM220942v1	NZ_CP022106	Halobacillus halophilus strain HL2HP6 chromosome, complete genome	1	1271051-1271145	1	CRISPRCasFinder	no	cas14j	cas3,csa3,RT,cas14j,DEDDh,DinG	Unclear	AAAGTGGAAACGTTTCCACTTTT	23	0	0	NA	NA	NA	1	1	TypeV	cas3,csa3,RT,cas14j,DEDDh,DinG	NA|96aa|up_5|NZ_CP022106.1_1265431_1265719_+,NA|53aa|up_3|NZ_CP022106.1_1266823_1266982_-,NA|71aa|down_5|NZ_CP022106.1_1276627_1276840_-	NA|216aa|up_9|NZ_CP022106.1_1256836_1257484_+	COG0398, COG0398, Uncharacterized conserved protein [Function unknown]	NA|179aa|up_8|NZ_CP022106.1_1257539_1258076_+	TIGR02227, Inactive_signal_peptidase_IA	NA|1169aa|up_7|NZ_CP022106.1_1258229_1261736_+	TIGR02773, ATP-dependent_helicase/deoxyribonuclease_subunit_B, helicase-exonuclease AddAB, AddB subunit	NA|1234aa|up_6|NZ_CP022106.1_1261729_1265431_+	TIGR02785, ATP-dependent_helicase/nuclease_subunit_A, helicase-exonuclease AddAB, AddA subunit, Firmicutes type	NA|96aa|up_5|NZ_CP022106.1_1265431_1265719_+	NA	NA|213aa|up_4|NZ_CP022106.1_1265801_1266440_-	COG2364, COG2364, Predicted membrane protein [Function unknown]	NA|53aa|up_3|NZ_CP022106.1_1266823_1266982_-	NA	NA|255aa|up_2|NZ_CP022106.1_1267691_1268456_-	pfam14344, DUF4397, Domain of unknown function (DUF4397)	cas14j|377aa|up_1|NZ_CP022106.1_1268659_1269790_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|323aa|up_0|NZ_CP022106.1_1270007_1270976_+	cd06291, PBP1_Qymf-like, ligand binding domain of the lacI-like transcription regulator from a novel metal-reducing bacterium Alkaliphilus Metalliredigens (strain Qymf) and its close homologs	NA|473aa|down_0|NZ_CP022106.1_1271178_1272597_+	TIGR01996, Includes:_Phosphotransferase_enzyme_IIB_component, PTS system, sucrose-specific IIBC component	NA|481aa|down_1|NZ_CP022106.1_1272787_1274230_+	TIGR01322, Sucrose-6-phosphate_hydrolase, sucrose-6-phosphate hydrolase	NA|288aa|down_2|NZ_CP022106.1_1274943_1275807_-	COG1834, COG1834, N-Dimethylarginine dimethylaminohydrolase [Amino acid transport and metabolism]	NA|73aa|down_3|NZ_CP022106.1_1275978_1276197_-	pfam10676, gerPA, Spore germination protein gerPA/gerPF	NA|123aa|down_4|NZ_CP022106.1_1276266_1276635_-	pfam10970, GerPE, Spore germination protein GerPE	NA|71aa|down_5|NZ_CP022106.1_1276627_1276840_-	NA	NA|169aa|down_6|NZ_CP022106.1_1276836_1277343_-	pfam10737, GerPC, Spore germination protein GerPC	NA|76aa|down_7|NZ_CP022106.1_1277430_1277658_-	pfam10803, GerPB, Spore germination GerPB	NA|74aa|down_8|NZ_CP022106.1_1277669_1277891_-	pfam10676, gerPA, Spore germination protein gerPA/gerPF	NA|397aa|down_9|NZ_CP022106.1_1277976_1279167_+	COG2311, COG2311, Predicted membrane protein [Function unknown]
GCF_002209425.1_ASM220942v1	NZ_CP022106	Halobacillus halophilus strain HL2HP6 chromosome, complete genome	2	1657221-1657310	2	CRISPRCasFinder	no	cas14j,csa3	cas3,csa3,RT,cas14j,DEDDh,DinG	Type I-A	ATTCAAACAATTATTTGAATGAA	23	0	0	NA	NA	NA	1	1	TypeV,TypeI-A	cas3,csa3,RT,cas14j,DEDDh,DinG	NA|79aa|up_3|NZ_CP022106.1_1651752_1651989_+,NA|73aa|down_2|NZ_CP022106.1_1662150_1662369_+	NA|297aa|up_9|NZ_CP022106.1_1642988_1643879_+	cd07568, ML_beta-AS_like, mammalian-like beta-alanine synthase (beta-AS) and similar proteins (class 5 nitrilases)	NA|458aa|up_8|NZ_CP022106.1_1644016_1645390_+	PRK11749, PRK11749, dihydropyrimidine dehydrogenase subunit A; Provisional	NA|429aa|up_7|NZ_CP022106.1_1645417_1646704_+	PRK08318, PRK08318, NAD-dependent dihydropyrimidine dehydrogenase subunit PreA	NA|472aa|up_6|NZ_CP022106.1_1646728_1648144_+	PRK08323, PRK08323, phenylhydantoinase; Validated	NA|448aa|up_5|NZ_CP022106.1_1648632_1649975_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|498aa|up_4|NZ_CP022106.1_1650244_1651738_+	cd10323, SLC-NCS1sbd, nucleobase-cation-symport-1 (NCS1) transporters; solute-binding domain	NA|79aa|up_3|NZ_CP022106.1_1651752_1651989_+	NA	NA|528aa|up_2|NZ_CP022106.1_1652100_1653684_+	pfam07905, PucR, Purine catabolism regulatory protein-like family	NA|447aa|up_1|NZ_CP022106.1_1653950_1655291_+	PRK07678, PRK07678, aminotransferase; Validated	NA|381aa|up_0|NZ_CP022106.1_1655312_1656455_+	cd05305, L-AlaDH, Alanine dehydrogenase NAD-binding and catalytic domains	NA|882aa|down_0|NZ_CP022106.1_1657728_1660374_+	COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism]	NA|408aa|down_1|NZ_CP022106.1_1660507_1661731_+	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|73aa|down_2|NZ_CP022106.1_1662150_1662369_+	NA	NA|195aa|down_3|NZ_CP022106.1_1662440_1663025_-	pfam01863, DUF45, Protein of unknown function DUF45	cas14j|373aa|down_4|NZ_CP022106.1_1663288_1664407_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|255aa|down_5|NZ_CP022106.1_1664865_1665630_+	pfam09529, Intg_mem_TP0381, Integral membrane protein (intg_mem_TP0381)	NA|64aa|down_6|NZ_CP022106.1_1665697_1665889_-	pfam08141, SspH, Small acid-soluble spore protein H family	NA|351aa|down_7|NZ_CP022106.1_1665971_1667024_-	cd08174, G1PDH-like, Glycerol-1-phosphate dehydrogenase-like	NA|219aa|down_8|NZ_CP022106.1_1667016_1667673_-	COG4359, COG4359, Uncharacterized conserved protein [Function unknown]	NA|266aa|down_9|NZ_CP022106.1_1667905_1668703_+	pfam10648, Gmad2, Immunoglobulin-like domain of bacterial spore germination
GCF_002209425.1_ASM220942v1	NZ_CP022107	Halobacillus halophilus strain HL2HP6 plasmid pHL2HP62	1	15308-15413	1	CRISPRCasFinder	no			Orphan	AACTATCGACAACTCGAAACGATCTC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,RT,cas14j,DEDDh,DinG	NA|64aa|up_9|NZ_CP022107.1_4202_4394_+,NA|144aa|up_7|NZ_CP022107.1_5739_6171_+,NA|55aa|up_4|NZ_CP022107.1_8393_8558_+,NA|58aa|up_3|NZ_CP022107.1_11985_12159_+,NA|63aa|up_1|NZ_CP022107.1_12792_12981_+,NA|106aa|down_0|NZ_CP022107.1_16383_16701_+	NA|64aa|up_9|NZ_CP022107.1_4202_4394_+	NA	NA|88aa|up_8|NZ_CP022107.1_4850_5114_-	pfam13443, HTH_26, Cro/C1-type HTH DNA-binding domain	NA|144aa|up_7|NZ_CP022107.1_5739_6171_+	NA	NA|92aa|up_6|NZ_CP022107.1_6515_6791_+	pfam11611, DUF4352, Domain of unknown function (DUF4352)	NA|211aa|up_5|NZ_CP022107.1_7346_7979_-	PRK11281, PRK11281, mechanosensitive channel MscK	NA|55aa|up_4|NZ_CP022107.1_8393_8558_+	NA	NA|58aa|up_3|NZ_CP022107.1_11985_12159_+	NA	NA|192aa|up_2|NZ_CP022107.1_12196_12772_+	PLN02381, PLN02381, valyl-tRNA synthetase	NA|63aa|up_1|NZ_CP022107.1_12792_12981_+	NA	NA|321aa|up_0|NZ_CP022107.1_13330_14293_+	smart00345, HTH_GNTR, helix_turn_helix gluconate operon transcriptional repressor	NA|106aa|down_0|NZ_CP022107.1_16383_16701_+	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
