The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP007197	Listeria monocytogenes serotype 1/2a str. 10-4754, complete genome	2910922	126222	132747	2910922	tail	Listeria_phage(33.33%)	10	NA	NA
WP_003721739.1|126222_126675_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A059T7S0	Listeria_phage	47.9	4.0e-31
WP_003721740.1|126680_127016_-	helix-turn-helix transcriptional regulator	NA	A0A2H4JAR9	uncultured_Caudovirales_phage	52.5	4.0e-20
WP_003732219.1|127232_127661_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003735200.1|127672_128089_+	hypothetical protein	NA	A8ASQ1	Listeria_phage	38.6	1.7e-20
WP_045598082.1|128366_128756_+	DUF5072 domain-containing protein	NA	NA	NA	NA	NA
WP_003721744.1|128768_129281_+|tail	phage major tail protein, TP901-1 family	tail	A0A097PBF4	Streptococcus_pyogenes_phage	62.7	1.2e-47
WP_003721745.1|129328_129631_+	hypothetical protein	NA	NA	NA	NA	NA
WP_072217178.1|129672_130077_+	phenylalanine racemase	NA	NA	NA	NA	NA
WP_031665466.1|130063_131932_+	membrane protein	NA	A0A097PAU2	Streptococcus_pyogenes_phage	45.8	3.5e-20
WP_009911828.1|131928_132747_+|tail	phage tail family protein	tail	A0A060AFE1	Staphylococcus_phage	35.0	7.2e-39
>prophage 2
NZ_CP007197	Listeria monocytogenes serotype 1/2a str. 10-4754, complete genome	2910922	1105393	1114351	2910922		Hokovirus(28.57%)	9	NA	NA
WP_003721506.1|1105393_1105777_+	glycerol-3-phosphate cytidylyltransferase	NA	A0A1V0SGE7	Hokovirus	40.7	1.4e-16
WP_003732709.1|1105798_1106782_+	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	34.6	4.1e-12
WP_045599224.1|1106796_1107810_+	glycosyltransferase	NA	A0A1V0SAH6	Catovirus	31.2	2.3e-10
WP_003721509.1|1108018_1109509_+	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	49.7	9.5e-114
WP_014601905.1|1109520_1110345_+	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.6	1.3e-67
WP_003721511.1|1110357_1110666_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_003721512.1|1110725_1111130_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_014601906.1|1111258_1112815_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	28.1	3.9e-17
WP_014601907.1|1112947_1114351_+	hypothetical protein	NA	Q38324	Lactococcus_phage	25.7	1.2e-17
>prophage 3
NZ_CP007197	Listeria monocytogenes serotype 1/2a str. 10-4754, complete genome	2910922	1199975	1305247	2910922	portal,protease,terminase,tail,capsid,integrase,holin,tRNA	Listeria_phage(72.31%)	111	1206415:1206432	1269424:1269441
WP_003736387.1|1199975_1201028_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2K9L3A8	Tupanvirus	34.9	1.3e-29
WP_003732769.1|1201027_1203436_+|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_026749898.1|1203596_1204298_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.8	3.9e-33
WP_031644433.1|1204311_1207722_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
1206415:1206432	attL	AGCTTACTTGCTTTATTT	NA	NA	NA	NA
WP_003721623.1|1207819_1208272_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_031644434.1|1208287_1211488_+	MMPL family transporter	NA	NA	NA	NA	NA
WP_003721625.1|1211594_1212269_+	uracil-DNA glycosylase	NA	A0A172DS90	Canid_alphaherpesvirus	47.7	1.7e-49
WP_072215733.1|1212305_1213232_-	ribonuclease HIII	NA	NA	NA	NA	NA
WP_003740576.1|1213385_1213649_+	cell division protein ZapA	NA	NA	NA	NA	NA
WP_003723849.1|1213648_1214191_+	CvpA family protein	NA	NA	NA	NA	NA
WP_010989712.1|1214283_1215996_+	DNA polymerase/3'-5' exonuclease PolX	NA	A0A2H4UV14	Bodo_saltans_virus	24.8	5.1e-18
WP_010989713.1|1216018_1218376_+	endonuclease MutS2	NA	Q94M10	Lactobacillus_phage	50.4	1.0e-21
WP_003723853.1|1218456_1218768_+	thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	39.6	5.4e-19
WP_003732777.1|1218843_1220655_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_003732778.1|1220843_1222058_+	aspartate kinase	NA	NA	NA	NA	NA
WP_003733801.1|1222113_1222608_-	YslB family protein	NA	NA	NA	NA	NA
WP_003723856.1|1222755_1223556_+	glutamate racemase	NA	NA	NA	NA	NA
WP_003732780.1|1223568_1224315_+	ribonuclease PH	NA	NA	NA	NA	NA
WP_012581486.1|1224318_1224930_+	XTP/dITP diphosphatase	NA	NA	NA	NA	NA
WP_012951515.1|1224966_1225491_+	metallophosphoesterase	NA	NA	NA	NA	NA
WP_026749902.1|1225776_1226931_-|integrase	site-specific integrase	integrase	A8ATC7	Listeria_phage	97.1	4.1e-213
WP_070216507.1|1227064_1227679_-	hypothetical protein	NA	A0A059T7Z1	Listeria_phage	100.0	2.0e-102
WP_015987306.1|1227729_1228182_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A059T7S0	Listeria_phage	100.0	2.4e-84
WP_088757880.1|1228198_1228519_-	helix-turn-helix transcriptional regulator	NA	A0A059T6G1	Listeria_phage	78.3	4.6e-42
WP_088757881.1|1228790_1228979_+	helix-turn-helix domain-containing protein	NA	A0A1S7FYV9	Listeria_phage	60.0	3.5e-13
WP_009929535.1|1229500_1229824_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009929536.1|1229838_1230042_+	helix-turn-helix transcriptional regulator	NA	A0A059T5F8	Listeria_phage	100.0	3.1e-28
WP_015987310.1|1230043_1230286_+	hypothetical protein	NA	A8ATD2	Listeria_phage	100.0	1.4e-43
WP_014929520.1|1230288_1230474_+	hypothetical protein	NA	A0A059T7Z3	Listeria_phage	100.0	2.6e-29
WP_057141538.1|1230997_1231285_+	hypothetical protein	NA	A0A059T7V3	Listeria_phage	89.5	7.8e-41
WP_057141571.1|1232481_1232865_+	hypothetical protein	NA	A0A0S2MYE6	Enterococcus_phage	56.0	2.8e-33
WP_057141541.1|1232925_1233213_+	hypothetical protein	NA	R4IBL5	Listeria_phage	55.8	4.0e-21
WP_057141542.1|1233209_1234136_+	RNA ligase family protein	NA	A0A059T6H0	Listeria_phage	100.0	2.1e-167
WP_014929534.1|1234377_1234761_+	hypothetical protein	NA	A0A059T6A2	Listeria_phage	99.2	5.5e-66
WP_014929535.1|1234762_1235242_+	siphovirus Gp157 family protein	NA	A0A059T803	Listeria_phage	100.0	5.4e-79
WP_003743935.1|1235254_1235944_+	AAA family ATPase	NA	A0A059T7T3	Listeria_phage	100.0	2.6e-130
WP_057141543.1|1236007_1237264_+	DEAD/DEAH box helicase	NA	Q8W5V9	Listeria_phage	95.9	1.3e-233
WP_009928019.1|1237288_1237774_+	DUF669 domain-containing protein	NA	A0A059T5G4	Listeria_phage	100.0	2.9e-88
WP_057141544.1|1237796_1240070_+	DNA primase	NA	A0A059T6A4	Listeria_phage	99.7	0.0e+00
WP_057141545.1|1240356_1240677_+	VRR-NUC domain-containing protein	NA	Q8W5V6	Listeria_phage	96.2	5.8e-53
WP_057141546.1|1240673_1240943_+	hypothetical protein	NA	W0GBM0	Listeria_phage	75.0	4.1e-15
WP_026749919.1|1241083_1241509_+	DUF722 domain-containing protein	NA	Q8W5V4	Listeria_phage	93.6	4.5e-69
WP_009928013.1|1241738_1242638_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014929541.1|1242897_1243224_+	hypothetical protein	NA	A0A059T5G5	Listeria_phage	95.4	3.9e-52
WP_009928009.1|1243223_1243538_+	HNH endonuclease	NA	A8ATF8	Listeria_phage	99.0	3.8e-57
WP_031668694.1|1243587_1243944_+	hypothetical protein	NA	A0A059T7Y1	Listeria_phage	96.0	1.0e-45
WP_026747160.1|1243940_1245584_+|terminase	terminase large subunit	terminase	A0A059T7Q8	Listeria_phage	98.9	0.0e+00
WP_009917707.1|1245593_1245983_-	DUF2513 domain-containing protein	NA	A0A1Q1PVT8	Staphylococcus_phage	39.8	3.7e-17
WP_057141547.1|1246033_1247164_+|portal	phage portal protein	portal	A0A059T6F0	Listeria_phage	99.2	4.0e-213
WP_026749923.1|1247160_1247958_+|protease	Clp protease ClpP	protease	A0A059T5F2	Listeria_phage	99.6	6.2e-144
WP_014930913.1|1247984_1249136_+|capsid	phage major capsid protein	capsid	A0A059T678	Listeria_phage	100.0	6.3e-214
WP_014930914.1|1249322_1249622_+	hypothetical protein	NA	A0A059T7R0	Listeria_phage	100.0	5.3e-48
WP_025370587.1|1249605_1249971_+	hypothetical protein	NA	A0A059T6F2	Listeria_phage	99.2	2.4e-63
WP_026747164.1|1249967_1250369_+	hypothetical protein	NA	A8ATA2	Listeria_phage	97.0	5.2e-67
WP_026749924.1|1250365_1250749_+	hypothetical protein	NA	A0A059T681	Listeria_phage	96.9	2.1e-65
WP_025370590.1|1250769_1251357_+|tail	phage tail protein	tail	A0A059T7Y4	Listeria_phage	99.0	1.3e-106
WP_025370591.1|1251427_1251760_+	hypothetical protein	NA	A0A059T7R2	Listeria_phage	97.3	8.7e-52
WP_088757882.1|1251975_1256889_+|tail	phage tail tape measure protein	tail	A0A059T5F4	Listeria_phage	99.3	0.0e+00
WP_088757883.1|1256885_1258535_+|tail	phage tail protein	tail	A0A059T682	Listeria_phage	99.3	0.0e+00
WP_069891567.1|1258547_1260842_+	hypothetical protein	NA	A0A059T7Y6	Listeria_phage	98.6	0.0e+00
WP_079442310.1|1260831_1261926_+	carbohydrate-binding protein CenC	NA	A0A059T7R4	Listeria_phage	98.9	1.6e-203
WP_069891571.1|1261973_1262417_+	hypothetical protein	NA	A0A059T6F6	Listeria_phage	98.0	5.8e-75
WP_009928179.1|1262395_1262812_+	hypothetical protein	NA	A0A059T5F5	Listeria_phage	99.3	9.3e-43
WP_009928180.1|1262832_1263099_+|holin	phage holin	holin	A0A059T684	Listeria_phage	95.5	3.0e-39
WP_009928181.1|1263098_1263950_+	peptidase M15	NA	A0A059T7Y8	Listeria_phage	97.2	2.3e-144
WP_088757884.1|1264196_1264802_-	hypothetical protein	NA	A0A059T7R6	Listeria_phage	97.9	4.1e-100
WP_088757885.1|1264837_1265287_-	helix-turn-helix domain-containing protein	NA	Q9T196	Listeria_phage	93.3	3.9e-71
WP_069001241.1|1265291_1265663_-	anti-CRISPR protein AcrIIA2	NA	A0A059T5F6	Listeria_phage	100.0	7.2e-63
WP_069001240.1|1265696_1266074_-	anti-CRISPR protein AcrIIA3	NA	A0A059T686	Listeria_phage	100.0	4.4e-68
WP_023553810.1|1266404_1266614_-	hypothetical protein	NA	A0A059T7Z0	Listeria_phage	100.0	1.9e-28
WP_088757886.1|1267054_1267288_+	hypothetical protein	NA	A8ATC5	Listeria_phage	90.9	1.7e-33
WP_045599352.1|1267935_1269294_+	DUF1254 domain-containing protein	NA	NA	NA	NA	NA
WP_003729706.1|1269335_1269929_-	hypothetical protein	NA	NA	NA	NA	NA
1269424:1269441	attR	AAATAAAGCAAGTAAGCT	NA	NA	NA	NA
WP_012581425.1|1270065_1270473_-	VOC family protein	NA	NA	NA	NA	NA
WP_031664862.1|1270637_1271237_+	histidine phosphatase family protein	NA	A0A1X9IGJ2	Lactococcus_phage	40.5	3.8e-29
WP_003723543.1|1271269_1271530_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012581424.1|1271653_1273066_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.1	2.2e-51
WP_003730329.1|1273090_1273354_+	DUF3116 domain-containing protein	NA	NA	NA	NA	NA
WP_031664861.1|1273519_1273996_+	8-oxo-dGTP diphosphatase	NA	NA	NA	NA	NA
WP_003730327.1|1274032_1274278_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012581422.1|1274274_1275480_-	MFS transporter	NA	NA	NA	NA	NA
WP_031664859.1|1275684_1276344_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_003726053.1|1276383_1276578_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003730323.1|1276644_1277493_-	YitT family protein	NA	NA	NA	NA	NA
WP_003732787.1|1278111_1278825_+	trehalose operon repressor	NA	NA	NA	NA	NA
WP_031664857.1|1278855_1280502_-	alpha,alpha-phosphotrehalase	NA	NA	NA	NA	NA
WP_023552381.1|1280520_1282005_-	PTS system trehalose-specific EIIBC component	NA	NA	NA	NA	NA
WP_014601949.1|1282121_1282583_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_003726717.1|1282621_1283086_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014601950.1|1283274_1284189_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_014601951.1|1284213_1285461_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	52.0	4.2e-107
WP_014601952.1|1285444_1286275_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	42.0	1.1e-45
WP_031664854.1|1286422_1287562_-|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_003723563.1|1287642_1288038_-	helix-turn-helix transcriptional regulator	NA	A9D9J6	Lactobacillus_prophage	57.4	1.3e-14
WP_003727524.1|1288188_1288404_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010989719.1|1288522_1289056_+|protease	matrixin family metalloprotease	protease	NA	NA	NA	NA
WP_003732795.1|1289073_1289739_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003732796.1|1290000_1290939_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003723884.1|1291053_1292337_+	trigger factor	NA	NA	NA	NA	NA
WP_003723886.1|1292521_1293781_+|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	63.2	1.4e-145
WP_003723887.1|1293899_1294466_+	type I signal peptidase SipX	NA	NA	NA	NA	NA
WP_003723888.1|1294500_1295070_+	type I signal peptidase SipY	NA	NA	NA	NA	NA
WP_003723889.1|1295171_1295714_+	type I signal peptidase SipZ	NA	NA	NA	NA	NA
WP_003723890.1|1295723_1296587_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA	NA
WP_023548886.1|1296583_1297369_+	ribonuclease HII	NA	G4YAY0	Emiliania_huxleyi_virus	39.2	3.0e-26
WP_003723892.1|1297502_1298363_+	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_009924617.1|1298633_1300712_+	type I DNA topoisomerase	NA	A0A1V0SB35	Catovirus	37.7	1.4e-107
WP_031664850.1|1300774_1302079_+|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	tRNA	NA	NA	NA	NA
WP_009911635.1|1302361_1303264_+	tyrosine recombinase XerC	NA	A0A097EYL9	Mycobacterium_phage	28.6	1.2e-13
WP_003724001.1|1303284_1303824_+|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_010989722.1|1303837_1305247_+|protease	ATP-dependent protease ATPase subunit HslU	protease	W6AS21	Erwinia_phage	27.7	4.9e-43
>prophage 4
NZ_CP007197	Listeria monocytogenes serotype 1/2a str. 10-4754, complete genome	2910922	1837545	1845831	2910922		Synechococcus_phage(33.33%)	8	NA	NA
WP_033921148.1|1837545_1838112_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.9	7.0e-25
WP_031665593.1|1838108_1839158_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	44.4	9.2e-63
WP_003722245.1|1839176_1840604_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	34.6	1.1e-53
WP_039384720.1|1840588_1842808_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	41.1	6.5e-159
WP_003733240.1|1842800_1843484_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_003722248.1|1843487_1843733_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_014931516.1|1843744_1844458_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3F9V5	Synechococcus_phage	37.8	8.8e-41
WP_045598711.1|1844538_1845831_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	33.0	2.5e-17
>prophage 5
NZ_CP007197	Listeria monocytogenes serotype 1/2a str. 10-4754, complete genome	2910922	2505515	2513359	2910922		Streptococcus_phage(50.0%)	7	NA	NA
WP_003722604.1|2505515_2506487_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	39.4	5.2e-52
WP_003722605.1|2506494_2507463_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	43.3	6.7e-68
WP_003722606.1|2507464_2508340_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	29.7	1.9e-08
WP_031645160.1|2508447_2510178_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	53.3	3.3e-174
WP_003734087.1|2510219_2511281_-	galactose mutarotase	NA	NA	NA	NA	NA
WP_014601137.1|2511297_2512281_-	UDP-glucose 4-epimerase GalE	NA	A0A1V0SG19	Hokovirus	37.2	1.6e-48
WP_003722610.1|2512399_2513359_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	53.7	2.0e-88
