assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002222555.1_ASM222255v1	NZ_CP022345	Bacillus thuringiensis strain c25 chromosome, complete genome	1	1266607-1267884	1	CRT	no		DEDDh,csa3,cas3,WYL,cas14j,DinG	Orphan	CAGTAGCACCNGTGTTAC	18	22	74	1266625-1266651|1266625-1266651|1266625-1266651|1266625-1266651|1266625-1266651|1266625-1266651|1266625-1266651|1266625-1266651|1266625-1266651|1266625-1266651|1266670-1266696|1266670-1266696|1266670-1266696|1266715-1266741|1266715-1266741|1266715-1266741|1266760-1266777|1266760-1266777|1266760-1266777|1266760-1266777|1266760-1266777|1266760-1266777|1266760-1266777|1266796-1266822|1266796-1266822|1266841-1266858|1266841-1266858|1266841-1266858|1266841-1266858|1266841-1266858|1266841-1266858|1266841-1266858|1266877-1266912|1266931-1266957|1266931-1266957|1266931-1266957|1266976-1267002|1266976-1267002|1267075-1267101|1267075-1267101|1267075-1267101|1267120-1267155|1267120-1267155|1267120-1267155|1267120-1267155|1267174-1267200|1267174-1267200|1267219-1267245|1267219-1267245|1267219-1267245|1267264-1267290|1267264-1267290|1267309-1267335|1267309-1267335|1267309-1267335|1267354-1267380|1267354-1267380|1267444-1267470|1267444-1267470|1267489-1267515|1267489-1267515|1267489-1267515|1267534-1267560|1267534-1267560|1267534-1267560|1267633-1267659|1267633-1267659|1267633-1267659|1267795-1267821|1267795-1267821|1267795-1267821|1267840-1267866|1267840-1267866|1267840-1267866	NZ_CP022345.1_1267975-1268001|NZ_CP022345.1_1268020-1268046|NZ_CP022345.1_1268146-1268172|NZ_CP022345.1_1268065-1268091|NZ_CP022345.1_1268254-1268280|NZ_CP022345.1_1268290-1268316|NZ_CP022345.1_1268452-1268478|NZ_CP022345.1_1268335-1268361|NZ_CP022345.1_1268371-1268397|NZ_CP022345.1_1268533-1268559|NZ_CP022345.1_1266364-1266390|NZ_CP022345.1_1266490-1266516|NZ_CP022345.1_1266409-1266435|NZ_CP022345.1_1266364-1266390|NZ_CP022345.1_1266490-1266516|NZ_CP022345.1_1266409-1266435|NZ_CP022345.1_1266319-1266336|NZ_CP022345.1_1266364-1266381|NZ_CP022345.1_1266454-1266471|NZ_CP022345.1_1266490-1266507|NZ_CP022345.1_312561-312544|NZ_CP022345.1_1266409-1266426|NZ_CP022345.1_2291780-2291763|NZ_CP022345.1_1266319-1266345|NZ_CP022345.1_1266454-1266480|NZ_CP022345.1_1266319-1266336|NZ_CP022345.1_1266364-1266381|NZ_CP022345.1_1266454-1266471|NZ_CP022345.1_1266490-1266507|NZ_CP022345.1_312561-312544|NZ_CP022345.1_1266409-1266426|NZ_CP022345.1_2291780-2291763|NZ_CP022345.1_1266301-1266336|NZ_CP022345.1_1266310-1266336|NZ_CP022345.1_1266355-1266381|NZ_CP022345.1_1266481-1266507|NZ_CP022345.1_1266319-1266345|NZ_CP022345.1_1266454-1266480|NZ_CP022345.1_1266364-1266390|NZ_CP022345.1_1266490-1266516|NZ_CP022345.1_1266409-1266435|NZ_CP022345.1_1266319-1266354|NZ_CP022345.1_1266364-1266399|NZ_CP022345.1_1266490-1266525|NZ_CP022345.1_1266409-1266444|NZ_CP022345.1_1266364-1266390|NZ_CP022345.1_1266490-1266516|NZ_CP022345.1_1266364-1266390|NZ_CP022345.1_1266490-1266516|NZ_CP022345.1_1266409-1266435|NZ_CP022345.1_1266364-1266390|NZ_CP022345.1_1266490-1266516|NZ_CP022345.1_1266409-1266435|NZ_CP022345.1_1266364-1266390|NZ_CP022345.1_1266490-1266516|NZ_CP022345.1_1266364-1266390|NZ_CP022345.1_1266490-1266516|NZ_CP022345.1_1266319-1266345|NZ_CP022345.1_1266454-1266480|NZ_CP022345.1_1266364-1266390|NZ_CP022345.1_1266490-1266516|NZ_CP022345.1_1266409-1266435|NZ_CP022345.1_1266364-1266390|NZ_CP022345.1_1266490-1266516|NZ_CP022345.1_1266409-1266435|NZ_CP022345.1_1266409-1266435|NZ_CP022345.1_1266364-1266390|NZ_CP022345.1_1266490-1266516|NZ_CP022345.1_1266409-1266435|NZ_CP022345.1_1266364-1266390|NZ_CP022345.1_1266490-1266516|NZ_CP022345.1_1266364-1266390|NZ_CP022345.1_1266490-1266516|NZ_CP022345.1_1266409-1266435	NA	27	27	Orphan	DEDDh,csa3,cas3,WYL,cas14j,DinG,RT	NA|113aa|up_9|NZ_CP022345.1_1256556_1256895_+,NA|82aa|up_2|NZ_CP022345.1_1264085_1264331_-,NA|71aa|down_8|NZ_CP022345.1_1277888_1278101_+	NA|113aa|up_9|NZ_CP022345.1_1256556_1256895_+	NA	NA|181aa|up_8|NZ_CP022345.1_1257212_1257755_+	COG2322, COG2322, Predicted membrane protein [Function unknown]	NA|388aa|up_7|NZ_CP022345.1_1257871_1259035_+	cd08187, BDH, Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process	NA|270aa|up_6|NZ_CP022345.1_1259135_1259945_+	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|304aa|up_5|NZ_CP022345.1_1259941_1260853_+	cd01164, FruK_PfkB_like, 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases	NA|619aa|up_4|NZ_CP022345.1_1260866_1262723_+	PRK10712, PRK10712, PTS system fructose-specific transporter subunits IIBC; Provisional	NA|317aa|up_3|NZ_CP022345.1_1263072_1264023_+	COG3584, COG3584, Uncharacterized protein conserved in bacteria [Function unknown]	NA|82aa|up_2|NZ_CP022345.1_1264085_1264331_-	NA	NA|318aa|up_1|NZ_CP022345.1_1264511_1265465_+	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed	NA|75aa|up_0|NZ_CP022345.1_1265486_1265711_+	PRK00395, hfq, RNA-binding protein Hfq; Provisional	NA|322aa|down_0|NZ_CP022345.1_1269171_1270137_-	COG4974, XerD, Site-specific recombinase XerD [DNA replication, recombination, and repair]	NA|319aa|down_1|NZ_CP022345.1_1270250_1271207_+	TIGR02881, Stage_V_sporulation_protein_K, stage V sporulation protein K	NA|208aa|down_2|NZ_CP022345.1_1271475_1272099_-	COG2860, COG2860, Predicted membrane protein [Function unknown]	NA|425aa|down_3|NZ_CP022345.1_1272191_1273466_+	TIGR03156, GTP_HflX, GTP-binding protein HflX	NA|424aa|down_4|NZ_CP022345.1_1273458_1274730_+	pfam06838, Met_gamma_lyase, Methionine gamma-lyase	NA|130aa|down_5|NZ_CP022345.1_1274915_1275305_+	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators	NA|445aa|down_6|NZ_CP022345.1_1275353_1276688_+	TIGR00653, Glutamine_synthetase, glutamine synthetase, type I	NA|220aa|down_7|NZ_CP022345.1_1277024_1277684_-	COG1974, LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) [Transcription / Signal transduction mechanisms]	NA|71aa|down_8|NZ_CP022345.1_1277888_1278101_+	NA	NA|253aa|down_9|NZ_CP022345.1_1278303_1279062_+	pfam10552, ORF6C, ORF6C domain
GCF_002222555.1_ASM222255v1	NZ_CP022345	Bacillus thuringiensis strain c25 chromosome, complete genome	2	1629596-1629746	1	PILER-CR	no		DEDDh,csa3,cas3,WYL,cas14j,DinG	Orphan	TGGTCCAACCGGTCCAACTGGT	22	0	0	NA	NA	NA	2	2	Orphan	DEDDh,csa3,cas3,WYL,cas14j,DinG,RT	NA|126aa|up_5|NZ_CP022345.1_1622570_1622948_-,NA	NA|443aa|up_9|NZ_CP022345.1_1619607_1620936_+	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|138aa|up_8|NZ_CP022345.1_1620988_1621402_+	pfam03899, ATP-synt_I, ATP synthase I chain	NA|183aa|up_7|NZ_CP022345.1_1621600_1622149_+	PRK04164, PRK04164, hypothetical protein; Provisional	NA|80aa|up_6|NZ_CP022345.1_1622254_1622494_-	pfam13061, DUF3923, Protein of unknown function (DUF3923)	NA|126aa|up_5|NZ_CP022345.1_1622570_1622948_-	NA	NA|305aa|up_4|NZ_CP022345.1_1623244_1624159_+	sd00006, TPR, Tetratricopeptide repeat	NA|398aa|up_3|NZ_CP022345.1_1624199_1625393_-	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|181aa|up_2|NZ_CP022345.1_1625505_1626048_+	pfam11706, zf-CGNR, CGNR zinc finger	NA|252aa|up_1|NZ_CP022345.1_1626087_1626843_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|836aa|up_0|NZ_CP022345.1_1626985_1629493_+	pfam03157, Glutenin_hmw, High molecular weight glutenin subunit	NA|154aa|down_0|NZ_CP022345.1_1632514_1632976_-	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain	NA|83aa|down_1|NZ_CP022345.1_1633185_1633434_+	COG2261, COG2261, Predicted membrane protein [Function unknown]	NA|374aa|down_2|NZ_CP022345.1_1633497_1634619_+	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|333aa|down_3|NZ_CP022345.1_1635257_1636256_+	PRK12556, PRK12556, tryptophanyl-tRNA synthetase; Provisional	NA|149aa|down_4|NZ_CP022345.1_1636264_1636711_-	cd04677, Nudix_Hydrolase_18, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|280aa|down_5|NZ_CP022345.1_1636728_1637568_-	pfam10978, DUF2785, Protein of unknown function (DUF2785)	NA|241aa|down_6|NZ_CP022345.1_1637691_1638414_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|340aa|down_7|NZ_CP022345.1_1638581_1639601_+	pfam13350, Y_phosphatase3, Tyrosine phosphatase family	NA|305aa|down_8|NZ_CP022345.1_1639722_1640637_+	COG3173, COG3173, Predicted aminoglycoside phosphotransferase [General function prediction only]	NA|237aa|down_9|NZ_CP022345.1_1640681_1641392_+	TIGR02254, hydrolase_haloacid_dehalogenase-like_family, noncanonical pyrimidine nucleotidase, YjjG family
GCF_002222555.1_ASM222255v1	NZ_CP022345	Bacillus thuringiensis strain c25 chromosome, complete genome	3	4230872-4230947	1	CRISPRCasFinder	no	csa3	DEDDh,csa3,cas3,WYL,cas14j,DinG	Type I-A	TGATTGTGTCCTCCATGGTGATGAT	25	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,cas3,WYL,cas14j,DinG,RT	NA,NA	NA|487aa|up_9|NZ_CP022345.1_4216096_4217557_-	pfam01235, Na_Ala_symp, Sodium:alanine symporter family	NA|324aa|up_8|NZ_CP022345.1_4217716_4218688_-	COG2334, COG2334, Putative homoserine kinase type II (protein kinase fold) [General function prediction only]	NA|501aa|up_7|NZ_CP022345.1_4218876_4220379_+	pfam03323, GerA, Bacillus/Clostridium GerA spore germination protein	NA|369aa|up_6|NZ_CP022345.1_4220359_4221466_+	pfam03845, Spore_permease, Spore germination protein	NA|375aa|up_5|NZ_CP022345.1_4221446_4222571_+	TIGR02887, Spore_germination_protein_B3, germination protein, Ger(x)C family	NA|554aa|up_4|NZ_CP022345.1_4222604_4224266_-	TIGR02403, Trehalose-6-phosphate_hydrolase, alpha,alpha-phosphotrehalase	NA|476aa|up_3|NZ_CP022345.1_4224279_4225707_-	TIGR01992, phosphotransferase_system_trehalose_permease, PTS system, trehalose-specific IIBC component	NA|237aa|up_2|NZ_CP022345.1_4225848_4226559_-	TIGR02404, Trehalose_operon_transcriptional_repressor, trehalose operon repressor, B	NA|466aa|up_1|NZ_CP022345.1_4227014_4228412_+	TIGR00905, Arginine/ornithine_antiporter, transporter, basic amino acid/polyamine antiporter (APA) family	NA|568aa|up_0|NZ_CP022345.1_4228443_4230147_-	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase	NA|510aa|down_0|NZ_CP022345.1_4231198_4232728_+	PRK12452, PRK12452, cardiolipin synthase	NA|298aa|down_1|NZ_CP022345.1_4232855_4233749_+	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|628aa|down_2|NZ_CP022345.1_4233752_4235636_+	COG4548, NorD, Nitric oxide reductase activation protein [Inorganic ion transport and metabolism]	NA|141aa|down_3|NZ_CP022345.1_4235673_4236096_-	cd02883, Nudix_Hydrolase, Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|322aa|down_4|NZ_CP022345.1_4236155_4237121_-	cd05272, TDH_SDR_e, L-threonine dehydrogenase, extended (e) SDRs	NA|397aa|down_5|NZ_CP022345.1_4237165_4238356_-	PRK06939, PRK06939, 2-amino-3-ketobutyrate coenzyme A ligase; Provisional	NA|244aa|down_6|NZ_CP022345.1_4238569_4239301_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|274aa|down_7|NZ_CP022345.1_4239328_4240150_-	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|353aa|down_8|NZ_CP022345.1_4240162_4241221_-	pfam01032, FecCD, FecCD transport family	NA|335aa|down_9|NZ_CP022345.1_4241217_4242222_-	pfam01032, FecCD, FecCD transport family
GCF_002222555.1_ASM222255v1	NZ_CP022346	Bacillus thuringiensis strain c25 plasmid unnamed1, complete sequence	1	205246-205376	1	CRISPRCasFinder	no		csa3,cas14j,RT	Orphan	AAATAATACCATTTTTTAGTGTTTGGATCCTGAAACCATCCTGT	44	1	1	205290-205332	NZ_CP022346.1_207884-207842	NA	1	1	Orphan	DEDDh,csa3,cas3,WYL,cas14j,DinG,RT	NA|72aa|up_5|NZ_CP022346.1_195357_195573_+,NA|84aa|up_3|NZ_CP022346.1_200432_200684_-,NA	NA|80aa|up_9|NZ_CP022346.1_187943_188183_+	PRK05087, PRK05087, D-alanine--poly(phosphoribitol) ligase subunit DltC	NA|393aa|up_8|NZ_CP022346.1_188179_189358_+	TIGR04092, hypothetical_protein, D-alanyl-lipoteichoic acid biosynthesis protein DltD	NA|257aa|up_7|NZ_CP022346.1_192660_193431_+	pfam03496, ADPrib_exo_Tox, ADP-ribosyltransferase exoenzyme	NA|49aa|up_6|NZ_CP022346.1_195131_195278_+	pfam01526, DDE_Tnp_Tn3, Tn3 transposase DDE domain	NA|72aa|up_5|NZ_CP022346.1_195357_195573_+	NA	NA|129aa|up_4|NZ_CP022346.1_197811_198198_+	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB	NA|84aa|up_3|NZ_CP022346.1_200432_200684_-	NA	NA|272aa|up_2|NZ_CP022346.1_200863_201679_+	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs	NA|61aa|up_1|NZ_CP022346.1_201724_201907_+	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB	NA|357aa|up_0|NZ_CP022346.1_202471_203542_-	PRK05084, xerS, site-specific tyrosine recombinase XerS; Reviewed	NA|508aa|down_0|NZ_CP022346.1_206915_208439_+	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|374aa|down_1|NZ_CP022346.1_209296_210418_-	pfam00144, Beta-lactamase, Beta-lactamase	NA|433aa|down_2|NZ_CP022346.1_210499_211798_-	pfam04294, VanW, VanW like protein	NA|283aa|down_3|NZ_CP022346.1_212014_212863_-	cd08442, PBP2_YofA_SoxR_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators, YofA and SoxR, contains the type 2 periplasmic binding fold	NA|482aa|down_4|NZ_CP022346.1_213344_214790_+	pfam03323, GerA, Bacillus/Clostridium GerA spore germination protein	NA|360aa|down_5|NZ_CP022346.1_214786_215866_+	pfam03845, Spore_permease, Spore germination protein	NA|367aa|down_6|NZ_CP022346.1_215872_216973_+	TIGR02887, Spore_germination_protein_B3, germination protein, Ger(x)C family	NA|150aa|down_7|NZ_CP022346.1_217009_217459_+	cd16913, YkuD_like, L,D-transpeptidases/carboxypeptidases similar to Bacillus YkuD	NA|224aa|down_8|NZ_CP022346.1_219381_220053_+	pfam02517, Abi, CAAX protease self-immunity	NA|478aa|down_9|NZ_CP022346.1_220276_221710_+	pfam01609, DDE_Tnp_1, Transposase DDE domain
