The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP013004	Xanthomonas citri pv. malvacearum strain XcmH1005 chromosome, complete genome	5212566	7531	36462	5212566	integrase,transposase,protease	Leptospira_phage(50.0%)	25	1920:1933	36841:36854
1920:1933	attL	ACCGGCGACAAGGT	NA	NA	NA	NA
WP_005927184.1|7531_8368_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_005912440.1|8551_9358_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_033836099.1|9635_10829_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_033836101.1|10981_11647_+	TonB family protein	NA	NA	NA	NA	NA
WP_005912445.1|11732_12494_+	TonB-system energizer ExbB	NA	NA	NA	NA	NA
WP_005912447.1|12540_12963_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_005912449.1|12966_13380_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_003482190.1|13641_14409_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_005912451.1|14416_14686_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005912453.1|14760_16221_-	cardiolipin synthase	NA	NA	NA	NA	NA
WP_089504397.1|16467_17554_+|transposase	IS3-like element ISXac2 family transposase	transposase	NA	NA	NA	NA
WP_033836104.1|17938_18433_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033836105.1|18475_18982_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033836106.1|19819_20470_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033836107.1|20509_24484_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033836989.1|24516_25176_-	DUF1629 domain-containing protein	NA	NA	NA	NA	NA
WP_033836108.1|25422_25902_-	DNA repair protein RadC	NA	NA	NA	NA	NA
WP_031422187.1|26305_26530_-	hypothetical protein	NA	NA	NA	NA	NA
WP_089504518.1|26599_27701_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.6	7.0e-45
WP_190276425.1|28382_28868_-	Abi family protein	NA	A0A059NT88	Lactococcus_phage	30.7	4.6e-09
WP_089504399.1|29987_31075_-|transposase	IS3-like element ISXac2 family transposase	transposase	NA	NA	NA	NA
WP_078565841.1|32016_32502_+	hypothetical protein	NA	NA	NA	NA	NA
WP_078565843.1|32502_32952_+	RES family NAD+ phosphorylase	NA	NA	NA	NA	NA
WP_033836110.1|32975_34442_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_003482177.1|35769_36462_+|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
36841:36854	attR	ACCGGCGACAAGGT	NA	NA	NA	NA
>prophage 2
NZ_CP013004	Xanthomonas citri pv. malvacearum strain XcmH1005 chromosome, complete genome	5212566	909298	921068	5212566		Enterobacteria_phage(37.5%)	11	NA	NA
WP_005913435.1|909298_910255_-	glycosyltransferase family 2 protein	NA	A0A192Y8W7	Salmonella_phage	27.1	1.8e-25
WP_005920793.1|910235_910964_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033836832.1|911127_912072_-	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA	NA
WP_005913446.1|912071_912818_-	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
WP_005913448.1|913038_914094_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	47.1	1.4e-82
WP_005913450.1|914145_915033_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	57.5	8.5e-94
WP_005913451.1|915029_915587_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	48.9	1.1e-43
WP_005913452.1|915583_916483_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.2	3.1e-27
WP_005913453.1|916822_917989_+	nucleotide sugar dehydrogenase	NA	M1HZB2	Paramecium_bursaria_Chlorella_virus	58.1	4.7e-116
WP_005913454.1|918271_919675_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	30.0	1.1e-47
WP_005913455.1|919721_921068_-	phosphomannomutase/phosphoglucomutase	NA	A0A127AWJ1	Bacillus_phage	27.1	7.5e-33
>prophage 3
NZ_CP013004	Xanthomonas citri pv. malvacearum strain XcmH1005 chromosome, complete genome	5212566	1266594	1319212	5212566	integrase,transposase,tRNA	Acinetobacter_phage(25.0%)	40	1299355:1299372	1307137:1307154
WP_087942126.1|1266594_1267750_+|transposase	IS3-like element ISXc8 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	37.5	2.1e-39
WP_005914526.1|1269673_1270315_-	DUF1629 domain-containing protein	NA	NA	NA	NA	NA
WP_089504425.1|1270710_1273386_+	M1 family metallopeptidase	NA	A0A0P0IY26	Acinetobacter_phage	48.1	7.7e-239
WP_033479683.1|1273453_1274023_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_005914529.1|1274304_1275222_+|tRNA	tRNA/rRNA methyltransferase	tRNA	NA	NA	NA	NA
WP_005914530.1|1275221_1276727_+	carboxylesterase family protein	NA	A0A0M4JT58	Mollivirus	32.6	4.7e-28
WP_179118913.1|1276777_1278265_-	neprosin family prolyl endopeptidase	NA	NA	NA	NA	NA
WP_033836783.1|1278566_1280531_-	glycoside hydrolase family 97 protein	NA	NA	NA	NA	NA
WP_033479678.1|1280749_1284217_+	glycoside hydrolase family 2	NA	NA	NA	NA	NA
WP_005914535.1|1284356_1287293_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_005914536.1|1287662_1288715_-	LacI family DNA-binding transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	32.2	1.1e-31
WP_033836780.1|1289068_1290487_-	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_003487203.1|1290610_1291042_-	large-conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_005914539.1|1292282_1292558_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005914540.1|1292823_1293165_+	Rieske (2Fe-2S) protein	NA	NA	NA	NA	NA
WP_005914542.1|1293225_1295088_-	SLC13 family permease	NA	NA	NA	NA	NA
WP_005914543.1|1295165_1295924_-|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	tRNA	NA	NA	NA	NA
WP_005914544.1|1296162_1296957_-	thiazole synthase	NA	NA	NA	NA	NA
WP_003487182.1|1297006_1297207_-	sulfur carrier protein ThiS	NA	NA	NA	NA	NA
WP_033836779.1|1297395_1299180_+	autotransporter domain-containing esterase	NA	NA	NA	NA	NA
1299355:1299372	attL	TTCCCATCGCCCGCTCCA	NA	NA	NA	NA
WP_078565763.1|1299439_1300999_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_078565761.1|1301188_1302130_+	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_078565984.1|1302277_1303654_+|transposase	IS5-like element ISXca5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.0	6.0e-62
WP_089504397.1|1304387_1305475_-|transposase	IS3-like element ISXac2 family transposase	transposase	NA	NA	NA	NA
WP_078515453.1|1305675_1306077_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_078515454.1|1306060_1306342_-	hypothetical protein	NA	NA	NA	NA	NA
WP_078515458.1|1306405_1306747_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005918502.1|1307233_1307482_-	hypothetical protein	NA	NA	NA	NA	NA
1307137:1307154	attR	TTCCCATCGCCCGCTCCA	NA	NA	NA	NA
WP_190276428.1|1307549_1307774_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003490665.1|1307953_1308613_+	thermonuclease family protein	NA	NA	NA	NA	NA
WP_005918499.1|1308723_1309116_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003490669.1|1309206_1309599_+	H-NS histone family protein	NA	NA	NA	NA	NA
WP_089504426.1|1310231_1312364_-	glycogen debranching protein GlgX	NA	NA	NA	NA	NA
WP_168950233.1|1312827_1313745_+	30S ribosomal protein S6--L-glutamate ligase	NA	A0A1D7SR78	Cyanophage	32.0	6.2e-31
WP_033479676.1|1313922_1314399_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003490678.1|1314424_1315102_+	response regulator transcription factor	NA	Q6XM27	Feldmannia_irregularis_virus	27.4	7.4e-05
WP_005917998.1|1315094_1316429_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_005922310.1|1316531_1316825_-	type I toxin-antitoxin system SymE family toxin	NA	NA	NA	NA	NA
WP_089504421.1|1316958_1318060_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.6	9.1e-45
WP_089504397.1|1318124_1319212_-|transposase	IS3-like element ISXac2 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP013004	Xanthomonas citri pv. malvacearum strain XcmH1005 chromosome, complete genome	5212566	1482212	1563171	5212566	protease,transposase,tRNA	Serratia_phage(11.11%)	53	NA	NA
WP_003482499.1|1482212_1482932_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	tRNA	NA	NA	NA	NA
WP_005913699.1|1482928_1483846_+	ADP-ribosylglycohydrolase family protein	NA	A0A1S6UB21	Serratia_phage	51.2	2.1e-71
WP_005913700.1|1483919_1484795_-	energy transducer TonB	NA	NA	NA	NA	NA
WP_033836727.1|1484791_1485742_-	glutathione synthase	NA	NA	NA	NA	NA
WP_005913706.1|1485978_1486380_+	twitching motility response regulator PilG	NA	NA	NA	NA	NA
WP_005913708.1|1486397_1486760_+	response regulator	NA	A0A220YL79	Alteromonas_virus	27.7	4.1e-10
WP_003482487.1|1486759_1487290_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_033836726.1|1487329_1489366_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	42.1	2.1e-23
WP_005915140.1|1496719_1497907_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033836724.1|1497940_1498417_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_005915136.1|1498648_1499287_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_005915130.1|1500450_1501515_+	N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase	NA	NA	NA	NA	NA
WP_005915128.1|1501511_1502243_+	copper homeostasis protein CutC	NA	NA	NA	NA	NA
WP_078566322.1|1502344_1503961_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033837112.1|1504316_1505477_-	exo-alpha-sialidase	NA	NA	NA	NA	NA
WP_005915124.1|1505938_1506268_+	RebB family R body protein	NA	NA	NA	NA	NA
WP_005915122.1|1506325_1506526_-	hypothetical protein	NA	NA	NA	NA	NA
WP_089504525.1|1507142_1509692_+	type III secretion system effector protein XopK	NA	NA	NA	NA	NA
WP_005915117.1|1509741_1511583_-	beta-galactosidase	NA	NA	NA	NA	NA
WP_078566323.1|1511781_1514124_-	GH92 family glycosyl hydrolase	NA	NA	NA	NA	NA
WP_033836721.1|1514210_1515674_-	glycoside hydrolase family 125 protein	NA	NA	NA	NA	NA
WP_125825484.1|1515992_1516220_+	hypothetical protein	NA	NA	NA	NA	NA
WP_089504397.1|1516444_1517531_+|transposase	IS3-like element ISXac2 family transposase	transposase	NA	NA	NA	NA
WP_005915111.1|1517624_1517891_+	hypothetical protein	NA	NA	NA	NA	NA
WP_125825485.1|1519260_1519440_+	hypothetical protein	NA	NA	NA	NA	NA
WP_078565771.1|1519725_1520553_+|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_089504418.1|1521420_1522640_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	67.0	2.7e-98
WP_033836718.1|1524127_1526788_-	glycoside hydrolase family 3 C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_033836717.1|1526950_1529641_-	glycoside hydrolase family 2 protein	NA	NA	NA	NA	NA
WP_033836716.1|1529662_1532110_-	family 20 glycosylhydrolase	NA	NA	NA	NA	NA
WP_017155577.1|1532367_1533435_-	glycosyl hydrolase	NA	A0A2P1CFB9	Microbacterium_phage	23.8	3.0e-08
WP_089504431.1|1533438_1535124_-	alpha-L-fucosidase	NA	NA	NA	NA	NA
WP_033836714.1|1535331_1538004_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_179119035.1|1538725_1539724_+	glucokinase	NA	NA	NA	NA	NA
WP_005915091.1|1540340_1541075_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_033836711.1|1541065_1542484_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	20.9	5.5e-10
WP_003482427.1|1542525_1543074_+	ADP compounds hydrolase NudE	NA	NA	NA	NA	NA
WP_003482426.1|1543070_1543871_+	3'(2'),5'-bisphosphate nucleotidase CysQ	NA	NA	NA	NA	NA
WP_005919027.1|1544059_1545079_+	nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_005915085.1|1545075_1545411_+	YnfA family protein	NA	A0A218MNG8	uncultured_virus	58.8	5.2e-28
WP_005915077.1|1546993_1548103_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_003482419.1|1548246_1548642_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_033836710.1|1548642_1548957_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003482414.1|1549647_1550115_+	hypothetical protein	NA	NA	NA	NA	NA
WP_179119033.1|1550756_1552100_-	serine hydrolase	NA	NA	NA	NA	NA
WP_033479050.1|1552469_1553831_+	MFS transporter	NA	NA	NA	NA	NA
WP_005915069.1|1554011_1554365_+	DUF1304 domain-containing protein	NA	NA	NA	NA	NA
WP_033836709.1|1554683_1557158_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_005915065.1|1557154_1558069_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003482399.1|1558205_1558814_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_089504397.1|1559554_1560642_-|transposase	IS3-like element ISXac2 family transposase	transposase	NA	NA	NA	NA
WP_089504432.1|1560907_1562004_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.6	9.0e-45
WP_089504526.1|1562015_1563171_+|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	37.5	2.1e-39
>prophage 5
NZ_CP013004	Xanthomonas citri pv. malvacearum strain XcmH1005 chromosome, complete genome	5212566	1851053	1899304	5212566	protease,transposase,tRNA	Streptomyces_phage(16.67%)	40	NA	NA
WP_089504445.1|1851053_1852016_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_154138554.1|1852049_1852436_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003487622.1|1852860_1853310_-	DUF4442 domain-containing protein	NA	NA	NA	NA	NA
WP_005912927.1|1853639_1854497_-	thioredoxin	NA	A0A1J0GW78	Streptomyces_phage	42.9	3.5e-12
WP_005912928.1|1854703_1855321_+	DUF998 domain-containing protein	NA	NA	NA	NA	NA
WP_089504446.1|1855388_1858031_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	40.2	1.7e-174
WP_005912936.1|1858607_1859252_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003486816.1|1859274_1860303_+	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
WP_033481585.1|1860299_1861169_+	nicotinate-nucleotide adenylyltransferase	NA	NA	NA	NA	NA
WP_005912943.1|1861225_1861639_+	ribosome silencing factor	NA	NA	NA	NA	NA
WP_089504447.1|1861797_1863333_-	DUF839 domain-containing protein	NA	NA	NA	NA	NA
WP_003486825.1|1863454_1863925_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
WP_179118940.1|1864003_1864609_-	TonB family protein	NA	NA	NA	NA	NA
WP_033836661.1|1864989_1868100_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_005912951.1|1868451_1869186_-	SIMPL domain-containing protein	NA	NA	NA	NA	NA
WP_005912953.1|1869324_1869897_+	Maf-like protein	NA	NA	NA	NA	NA
WP_003486835.1|1869896_1871396_+	ribonuclease G	NA	NA	NA	NA	NA
WP_033836660.1|1871572_1875493_+	TIGR02099 family protein	NA	NA	NA	NA	NA
WP_005912956.1|1875508_1876261_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005912957.1|1876360_1877806_+|protease	metalloprotease TldD	protease	NA	NA	NA	NA
WP_089504448.1|1877975_1878557_-	ribosome-associated protein	NA	NA	NA	NA	NA
WP_005912967.1|1878704_1880072_+|protease	metalloprotease PmbA	protease	NA	NA	NA	NA
WP_016849602.1|1880389_1880857_+	DUF4870 domain-containing protein	NA	NA	NA	NA	NA
WP_089504527.1|1880926_1882063_-|protease	protease	protease	NA	NA	NA	NA
WP_087959283.1|1882059_1883285_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	76.3	1.1e-120
WP_003486850.1|1883796_1884672_-	polyprenyl synthetase family protein	NA	NA	NA	NA	NA
WP_033836658.1|1884673_1884925_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
WP_033837101.1|1884956_1886258_-|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
WP_033836656.1|1886627_1888331_-	alkaline phosphatase	NA	NA	NA	NA	NA
WP_005912974.1|1888473_1889814_+	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA	NA
WP_005912975.1|1889823_1890660_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_003486865.1|1890894_1891386_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003486867.1|1891593_1892343_-	C40 family peptidase	NA	A0A0K2SUC1	Clostridium_phage	38.5	1.2e-19
WP_003486869.1|1892452_1892995_-	C40 family peptidase	NA	A0A1V0DZX6	Clostridioides_phage	39.3	6.1e-18
WP_003486870.1|1893104_1893584_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
WP_089504449.1|1893819_1895064_+	DUF418 domain-containing protein	NA	NA	NA	NA	NA
WP_033837100.1|1895071_1896322_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003486876.1|1896318_1897689_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	26.0	4.9e-40
WP_033479106.1|1898160_1898568_+	MGMT family protein	NA	NA	NA	NA	NA
WP_003486879.1|1898608_1899304_+|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
>prophage 6
NZ_CP013004	Xanthomonas citri pv. malvacearum strain XcmH1005 chromosome, complete genome	5212566	2484711	2545018	5212566	transposase,integrase	Planktothrix_phage(25.0%)	47	2485189:2485213	2520046:2520070
WP_089504421.1|2484711_2485814_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.6	9.1e-45
2485189:2485213	attL	GAAGTCCATCGACCAGACCTGGTTG	NA	NA	NA	NA
WP_003482798.1|2487167_2487827_-	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA	NA
WP_003482797.1|2487880_2489797_-	phosphogluconate dehydratase	NA	NA	NA	NA	NA
WP_005916768.1|2489885_2490605_-	6-phosphogluconolactonase	NA	NA	NA	NA	NA
WP_005916764.1|2490601_2491609_-	glucokinase	NA	NA	NA	NA	NA
WP_005923374.1|2491605_2493036_-	glucose-6-phosphate dehydrogenase	NA	A0A222YYZ2	Synechococcus_phage	34.5	1.9e-66
WP_005916757.1|2493456_2494545_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	30.1	3.3e-23
WP_005916754.1|2494675_2495548_-	folate-binding protein YgfZ	NA	NA	NA	NA	NA
WP_074053419.1|2495491_2495758_+	DUF1674 domain-containing protein	NA	NA	NA	NA	NA
WP_005916751.1|2495814_2496210_+	succinate dehydrogenase, cytochrome b556 subunit	NA	NA	NA	NA	NA
WP_003482790.1|2496206_2496593_+	succinate dehydrogenase, hydrophobic membrane anchor protein	NA	NA	NA	NA	NA
WP_005916748.1|2496626_2498417_+	succinate dehydrogenase flavoprotein subunit	NA	NA	NA	NA	NA
WP_005916745.1|2498426_2498630_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005916743.1|2498646_2499429_+	succinate dehydrogenase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_003482785.1|2499539_2499788_+	succinate dehydrogenase assembly factor 2	NA	NA	NA	NA	NA
WP_029829028.1|2499738_2500191_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005916737.1|2500214_2501456_+	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_016849492.1|2501448_2502183_+	lipoprotein-releasing ABC transporter ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	34.9	1.3e-31
WP_005916734.1|2502393_2503458_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_033481966.1|2503757_2506304_+	DNA internalization-related competence protein ComEC/Rec2	NA	NA	NA	NA	NA
WP_005916730.1|2506194_2506857_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_005916727.1|2506860_2507328_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_005916724.1|2507324_2509094_+	lipid A export permease/ATP-binding protein MsbA	NA	W8CYL7	Bacillus_phage	27.8	9.4e-52
WP_005916716.1|2509090_2510128_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_003490553.1|2510420_2511200_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_005916712.1|2511196_2511661_+	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
WP_033836544.1|2511684_2513103_+	nhl repeat protein	NA	NA	NA	NA	NA
WP_033836543.1|2513099_2514959_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_005916703.1|2514955_2515588_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_033836542.1|2516224_2518159_+|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	A0A0U1UNT3	Pseudomonas_phage	48.2	1.2e-100
WP_078566356.1|2518225_2518876_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_033836541.1|2518978_2519272_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_089504397.1|2519595_2520683_-|transposase	IS3-like element ISXac2 family transposase	transposase	NA	NA	NA	NA
2520046:2520070	attR	GAAGTCCATCGACCAGACCTGGTTG	NA	NA	NA	NA
WP_053329467.1|2521811_2522609_-	hypothetical protein	NA	NA	NA	NA	NA
WP_082333586.1|2522898_2524611_-	ATP-dependent helicase	NA	NA	NA	NA	NA
WP_078566018.1|2524607_2526488_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_078565984.1|2529878_2531255_-|transposase	IS5-like element ISXca5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.0	6.0e-62
WP_078565998.1|2532724_2534272_+	MASE1 domain-containing protein	NA	NA	NA	NA	NA
WP_033836538.1|2535293_2535941_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033836537.1|2535972_2537112_+	type IV secretion system protein	NA	NA	NA	NA	NA
WP_078565734.1|2537133_2537664_+	DUF4189 domain-containing protein	NA	NA	NA	NA	NA
WP_078565732.1|2537941_2538463_+	DUF4189 domain-containing protein	NA	NA	NA	NA	NA
WP_033836536.1|2538828_2539359_+	hypothetical protein	NA	NA	NA	NA	NA
WP_078565730.1|2539355_2540015_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033836535.1|2540011_2541358_+	hypothetical protein	NA	NA	NA	NA	NA
WP_089504397.1|2542137_2543224_+|transposase	IS3-like element ISXac2 family transposase	transposase	NA	NA	NA	NA
WP_089504418.1|2543799_2545018_+|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	67.0	2.7e-98
>prophage 7
NZ_CP013004	Xanthomonas citri pv. malvacearum strain XcmH1005 chromosome, complete genome	5212566	2614096	2674176	5212566	coat,transposase	Xanthomonas_phage(36.36%)	43	NA	NA
WP_033474620.1|2614096_2615137_+|transposase	IS21 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	49.4	1.5e-81
WP_017154874.1|2615136_2615937_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	59.9	3.6e-83
WP_042827389.1|2619309_2623344_+	helicase	NA	NA	NA	NA	NA
WP_033836484.1|2623346_2625206_+	DUF1998 domain-containing protein	NA	NA	NA	NA	NA
WP_033836485.1|2625207_2625969_+	phospholipase	NA	NA	NA	NA	NA
WP_033836486.1|2626185_2626695_-	DUF3577 domain-containing protein	NA	NA	NA	NA	NA
WP_082333612.1|2627483_2627813_-	DUF4879 domain-containing protein	NA	I6NTM5	Burkholderia_phage	59.6	2.1e-21
WP_089504465.1|2628412_2630533_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033836487.1|2630532_2631456_+	hypothetical protein	NA	NA	NA	NA	NA
WP_131830086.1|2632342_2632588_-	hypothetical protein	NA	NA	NA	NA	NA
WP_089504397.1|2633348_2634436_-|transposase	IS3-like element ISXac2 family transposase	transposase	NA	NA	NA	NA
WP_005916480.1|2644137_2644791_-	4'-phosphopantetheinyl transferase superfamily protein	NA	NA	NA	NA	NA
WP_005916477.1|2645275_2646568_+	nucleotide sugar dehydrogenase	NA	NA	NA	NA	NA
WP_005916474.1|2646551_2647814_-	TIGR03862 family flavoprotein	NA	NA	NA	NA	NA
WP_005916471.1|2647824_2648256_-	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_005916468.1|2648315_2648681_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005916465.1|2648780_2649527_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_003489223.1|2649765_2650413_+	response regulator	NA	NA	NA	NA	NA
WP_089504466.1|2650938_2654601_-	Rne/Rng family ribonuclease	NA	NA	NA	NA	NA
WP_005916458.1|2655010_2655997_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_089504533.1|2656029_2657811_-	DUF3300 domain-containing protein	NA	NA	NA	NA	NA
WP_005916452.1|2658136_2658955_-	zinc transporter ZupT	NA	NA	NA	NA	NA
WP_005916451.1|2659220_2659643_-	energy transducer TonB	NA	NA	NA	NA	NA
WP_003489213.1|2659639_2659996_-	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_003489210.1|2660084_2660684_+	NfuA family Fe-S biogenesis protein	NA	NA	NA	NA	NA
WP_005916447.1|2660697_2662527_+	hypothetical protein	NA	NA	NA	NA	NA
WP_050554804.1|2662797_2663151_-	hypothetical protein	NA	NA	NA	NA	NA
WP_069288182.1|2663482_2663848_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033481018.1|2664282_2664621_+	phage-like protein	NA	Q38057	Xanthomonas_phage	74.1	8.3e-42
WP_078566230.1|2664687_2664999_+	chloride channel protein	NA	A0A1W6DXV7	Xanthomonas_phage	92.2	3.4e-50
WP_078565882.1|2665132_2665381_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011269757.1|2666821_2667142_-|coat	minor coat protein	coat	Q4LAU3	Stenotrophomonas_phage	44.2	3.5e-21
WP_033481017.1|2667152_2667392_-	hypothetical protein	NA	Q9XJ91	Xanthomonas_phage	93.7	3.1e-35
WP_089504418.1|2667517_2668736_+|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	67.0	2.7e-98
WP_190276413.1|2668703_2669003_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005918131.1|2669577_2669706_-|coat	Phi-Lf prophage-derived major coat protein	coat	NA	NA	NA	NA
WP_165690567.1|2669733_2669985_-	hypothetical protein	NA	NA	NA	NA	NA
WP_078565876.1|2669988_2670285_-	single-stranded DNA-binding protein	NA	B1NI78	Stenotrophomonas_phage	66.3	1.5e-26
WP_022559207.1|2670281_2671391_-	replication initiation factor domain-containing protein	NA	S0F3I3	Stenotrophomonas_phage	75.0	1.0e-160
WP_078565874.1|2671383_2671566_-	hypothetical protein	NA	NA	NA	NA	NA
WP_078565872.1|2671562_2671787_-	hypothetical protein	NA	A0A1W6DXK4	Xanthomonas_phage	88.4	4.4e-23
WP_190276414.1|2672411_2673092_+	hypothetical protein	NA	NA	NA	NA	NA
WP_087943923.1|2673088_2674176_-|transposase	IS3-like element ISXac2 family transposase	transposase	NA	NA	NA	NA
>prophage 8
NZ_CP013004	Xanthomonas citri pv. malvacearum strain XcmH1005 chromosome, complete genome	5212566	2691705	2758071	5212566	transposase,integrase	Burkholderia_virus(42.86%)	45	2736581:2736640	2768121:2769572
WP_089504418.1|2691705_2692924_+|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	67.0	2.7e-98
WP_005916049.1|2693008_2694493_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_016851584.1|2694611_2695634_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_005916054.1|2695630_2696242_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_005916057.1|2696544_2706738_-	autotransporter-associated beta strand repeat-containing protein	NA	NA	NA	NA	NA
WP_005916060.1|2707482_2709294_+	phosphodiesterase	NA	NA	NA	NA	NA
WP_005916063.1|2709419_2710118_-	DUF1349 domain-containing protein	NA	NA	NA	NA	NA
WP_005916065.1|2710521_2711442_-	M14 family metallocarboxypeptidase	NA	NA	NA	NA	NA
WP_005921275.1|2711543_2712053_-	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_033836494.1|2712700_2712958_-	stress-induced protein	NA	NA	NA	NA	NA
WP_005916080.1|2715345_2716323_+	siroheme synthase	NA	NA	NA	NA	NA
WP_003482846.1|2716467_2716830_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033836495.1|2716813_2717383_-	molybdenum cofactor guanylyltransferase	NA	NA	NA	NA	NA
WP_033481925.1|2717420_2718695_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_005916089.1|2718875_2719151_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005916091.1|2719187_2720180_-	exodeoxyribonuclease III	NA	NA	NA	NA	NA
WP_016848755.1|2720178_2720331_+	hypothetical protein	NA	NA	NA	NA	NA
WP_089504468.1|2720813_2723696_+	TAL effector repeat-containing protein	NA	NA	NA	NA	NA
WP_089504418.1|2726001_2727221_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	67.0	2.7e-98
WP_005918046.1|2727794_2730299_+	HAD hydrolase-like protein	NA	NA	NA	NA	NA
WP_089504534.1|2730734_2731811_-	avirulence protein	NA	NA	NA	NA	NA
WP_033836454.1|2732297_2732612_+	DUF1153 domain-containing protein	NA	NA	NA	NA	NA
WP_033837060.1|2732608_2733430_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_017154874.1|2734052_2734853_-	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	59.9	3.6e-83
WP_033474620.1|2734852_2735893_-|transposase	IS21 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	49.4	1.5e-81
WP_005923977.1|2736011_2736314_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
WP_005918020.1|2736307_2736580_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
2736581:2736640	attL	CGGCATGGATCGACGCGCTGCCGCTGCCATCGACGACCCGTCGGCGCTGCGTGCGCCGCT	NA	NA	NA	NA
WP_005934416.1|2736768_2736969_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_078514874.1|2737089_2737641_-	type III effector	NA	NA	NA	NA	NA
WP_033836455.1|2738064_2739120_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_005923972.1|2739303_2740578_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_078566280.1|2740586_2743583_+|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	28.0	1.7e-85
WP_089504470.1|2744058_2745146_-|transposase	IS3-like element ISXac2 family transposase	transposase	NA	NA	NA	NA
WP_078566343.1|2745724_2746912_-	zeta toxin family protein	NA	NA	NA	NA	NA
WP_005917846.1|2746918_2747182_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011053002.1|2747206_2747608_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
WP_005917852.1|2747604_2747865_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_089504471.1|2748214_2751499_+	TAL effector repeat-containing protein	NA	NA	NA	NA	NA
WP_033837071.1|2751683_2752535_-	putative addiction module antidote protein	NA	A4JWV1	Burkholderia_virus	48.6	3.3e-10
WP_033836498.1|2752534_2753122_-	ComF family protein	NA	NA	NA	NA	NA
WP_033837724.1|2753360_2754011_+	recombinase family protein	NA	NA	NA	NA	NA
WP_033836500.1|2754280_2755150_+	site-specific DNA-methyltransferase	NA	S4VZJ3	Pandoravirus	58.4	7.1e-93
WP_033836501.1|2755146_2756148_+	XcyI family restriction endonuclease	NA	NA	NA	NA	NA
WP_033836502.1|2756642_2756987_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_089504397.1|2756983_2758071_-|transposase	IS3-like element ISXac2 family transposase	transposase	NA	NA	NA	NA
2768121:2769572	attR	AGCGGCGCACGCAGCGCCGACGGGTCGTCGATGGCAGCGGCAGCGCGTCGATCCATGCCGTCAGCATGCCACTGTTACAGCGCCTTGGCACCTGCCATCGGCGGGATAGACAGCCGCTGCCAGTCCACGCCCGCGCACAGTCAGGCAAACTGCCCCCGGGCGGTCGCAGCACAGCAGCTTGATCCGCGTGGCAGCGCGATTGGCGAACACGTAGGCCTCGCCCTCTGCCGGGGTCCGATGCATCGCCGTTTGCGCCGCCAGCAGCAGCCGGTCGATGCCGCAGCGCAGGTCCGTGGGCGCGGTGACCAGCCACCAGCGCTGCAGGCTCAGCATGCGCCCAGCGCACGCAGTAGCCCGACCAGCCACGCCGGATCGACCTGCACCAGCGACAGCGCATCCCGCCGGCCAGGTGCAACTGCACGGTGGCAGCCGAATCCGGCGCGGCAACCGGCTGCACGCGCAGCGGCAACTCCCCGGCGGGCGCCACGGGGCCTTTGGCCAGCCTGCGCCGCCAATACCCGAAACTGGCCAGCGACAGCCCCTGCTCACGACACCACGCCACCTGGCTCAGCCCATTGACGCGCCACGCTTGCACATGCTCCGCCCACTGTTCGCGCTTGCTGTGCATCCAAAATCTCCGTTTGGAAAGAGCGGCTATGCAAGCGGTAGCCATGAGACTGAACTGGCGTGGCGGTGTAGTTCTGTTGCCCCAAAATATCCGCTAACTCACTGATGCAATGGATGAAATCCAATCTTGTGAGCTATTTTTACACGTATGTCGGCTGAACCCCATGACGCAGCTGCAACGCTGCGAGACCGCGCTGCAGGCCGAACGCGAGGCGGGCGACGCTGCCAGGAGCGAAGTGGCCCGCCGCACCACCGAACTGGCGCAGCTGGAGGAACGGATCTGCGGCCTGACCGTTCGCGTGGCCGAGCACGACGCCCATGCGAAATCCTTGGAACACAAGCACGAACACGCCAGGGAAGCCCTGGAGCACTACCGCACCTCGGTCAAGGACCAGCGCGAGCAGGAACAGCGCCGGCATGAGCACCAGGTGCAGGAACTGCAGGTCGCCCTACGGCAGGCCAACGAGGCATTGACCGCCAAGAACCACGACCTGATGCAGCTCAACCGGGAAAACGGCCAGTGGCTGGAACGCCAGACCCGGCTGGAGCGGGAACTGGCGCAGGCACGCCAGCGGGCCGACGCCCAGCAACGCGAGCGCGACGCGCTGCGCCTGGCGGCCACCAAGCCCTGCAGGTGCGCTGGACCCAAGATGTCCATGCGCTGGAAGGCGTGCGCGCCGAACTGGCTGCGGCGCGGACCGAACTGGTCGAAGAGCGCTAGCGCCGGGAACACGCCGAGGCGGACACCTTGCGGGCCACGGTGCGCCTGAGCACGTTGGAACAACTCTTGGCGCAGCTGCGGCTGGCGCACTCCGTTGGCGAACT	NA	NA	NA	NA
>prophage 9
NZ_CP013004	Xanthomonas citri pv. malvacearum strain XcmH1005 chromosome, complete genome	5212566	3134610	3145388	5212566	tRNA	uncultured_Caudovirales_phage(16.67%)	7	NA	NA
WP_033836411.1|3134610_3136569_-	PAS domain S-box protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	42.8	9.6e-13
WP_003481884.1|3137868_3138081_-	carbon storage regulator CsrA	NA	J7I430	Pseudomonas_phage	76.5	1.3e-13
WP_005915037.1|3138220_3140869_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	40.0	4.3e-85
WP_003481873.1|3140970_3141459_-	recombination regulator RecX	NA	NA	NA	NA	NA
WP_003481871.1|3141777_3142812_-	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	61.3	5.1e-114
WP_005915033.1|3142984_3143626_-	transcriptional repressor LexA	NA	A0A1W6JNS2	Morganella_phage	40.2	2.4e-13
WP_005915030.1|3143711_3145388_-	2-polyprenylphenol 6-hydroxylase	NA	G8DDN0	Micromonas_pusilla_virus	29.4	1.9e-41
>prophage 10
NZ_CP013004	Xanthomonas citri pv. malvacearum strain XcmH1005 chromosome, complete genome	5212566	3573582	3640977	5212566	transposase,protease	Tupanvirus(15.38%)	54	NA	NA
WP_089504418.1|3573582_3574802_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	67.0	2.7e-98
WP_005911628.1|3574920_3575421_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_033836341.1|3575607_3576864_+	2OG-Fe(II) oxygenase	NA	A0A2H4IAX9	Erwinia_phage	34.1	1.3e-18
WP_005911626.1|3577020_3578121_+	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA	NA
WP_033836340.1|3578182_3581023_-|protease	autotransporter serine protease	protease	A0A1V0SBG2	Catovirus	24.6	1.3e-07
WP_033836339.1|3581178_3582354_+	thiolase family protein	NA	NA	NA	NA	NA
WP_033837036.1|3582476_3582818_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005921547.1|3583047_3583374_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033836338.1|3583484_3585194_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	37.5	9.5e-17
WP_003489446.1|3585437_3585992_+	polymer-forming cytoskeletal protein	NA	NA	NA	NA	NA
WP_003489443.1|3585988_3586354_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033836337.1|3586558_3587581_+	ligase-associated DNA damage response exonuclease	NA	NA	NA	NA	NA
WP_033836336.1|3587577_3587811_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005911608.1|3587807_3589412_+	ATP-dependent DNA ligase	NA	A0A2H4JD86	uncultured_Caudovirales_phage	28.5	4.7e-10
WP_033836335.1|3589408_3591910_+	ligase-associated DNA damage response DEXH box helicase	NA	NA	NA	NA	NA
WP_033481481.1|3591899_3592544_+	ligase-associated DNA damage response endonuclease PdeM	NA	NA	NA	NA	NA
WP_033836334.1|3592708_3593983_-	FAD-dependent monooxygenase	NA	NA	NA	NA	NA
WP_033836333.1|3594076_3594283_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	68.7	4.6e-19
WP_003488190.1|3594370_3595123_-	S-methyl-5'-thioinosine phosphorylase	NA	NA	NA	NA	NA
WP_003488192.1|3595208_3595763_-	hypoxanthine-guanine phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_005921530.1|3595762_3596767_-	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_005911591.1|3596883_3598461_-	cryptochrome/photolyase family protein	NA	E3T4R9	Cafeteria_roenbergensis_virus	27.2	4.9e-44
WP_033836331.1|3598637_3599672_-	NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_005911587.1|3599686_3600370_-	DsbA family oxidoreductase	NA	NA	NA	NA	NA
WP_033836330.1|3601178_3602513_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	F5CA72	Streptococcus_phi-m46.1-like_phage	27.2	3.8e-29
WP_005911581.1|3602671_3603394_+	response regulator	NA	NA	NA	NA	NA
WP_033836329.1|3603792_3604515_-	DNA repair protein RecO	NA	NA	NA	NA	NA
WP_005911577.1|3604750_3605650_-	GTPase Era	NA	NA	NA	NA	NA
WP_003488212.1|3605646_3606327_-	ribonuclease III	NA	A0A2K9L8W0	Tupanvirus	30.0	1.2e-18
WP_016850781.1|3606316_3606724_-	DUF4845 domain-containing protein	NA	NA	NA	NA	NA
WP_003488217.1|3606724_3607525_-	signal peptidase I	NA	NA	NA	NA	NA
WP_003488219.1|3607628_3609419_-	elongation factor 4	NA	A0A2K9L6L3	Tupanvirus	41.2	1.2e-22
WP_005921518.1|3609606_3611184_-|protease	DegQ family serine endoprotease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	29.5	2.1e-26
WP_005911569.1|3611292_3612189_-	sigma-E factor negative regulatory protein	NA	NA	NA	NA	NA
WP_003488227.1|3612185_3612806_-	RNA polymerase sigma factor RpoE	NA	NA	NA	NA	NA
WP_005921513.1|3613042_3615124_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_005911557.1|3615354_3616320_-	cation transporter	NA	NA	NA	NA	NA
WP_179119019.1|3616539_3617442_-	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_005911552.1|3617596_3618784_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_005911550.1|3618783_3619581_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_005911548.1|3619577_3620759_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_005911546.1|3620769_3622275_-	CoA-acylating methylmalonate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_033836328.1|3622413_3623799_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_078566217.1|3624314_3627008_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_005911539.1|3627192_3628404_+	glycosyl hydrolase 53 family protein	NA	NA	NA	NA	NA
WP_033836327.1|3628400_3630965_+	DUF4982 domain-containing protein	NA	L0N6M2	Herpes_simplex_virus	26.3	1.2e-26
WP_031421772.1|3631201_3631555_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005918384.1|3631719_3633648_-	alpha-L-fucosidase	NA	NA	NA	NA	NA
WP_131453069.1|3634229_3634757_-	hypothetical protein	NA	NA	NA	NA	NA
WP_078565984.1|3635546_3636923_+|transposase	IS5-like element ISXca5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.0	6.0e-62
WP_087943923.1|3637064_3638151_+|transposase	IS3-like element ISXac2 family transposase	transposase	NA	NA	NA	NA
WP_005918625.1|3638771_3639245_-	pentapeptide repeat-containing protein	NA	NA	NA	NA	NA
WP_131830061.1|3639241_3639757_-	hypothetical protein	NA	NA	NA	NA	NA
WP_089504397.1|3639889_3640977_-|transposase	IS3-like element ISXac2 family transposase	transposase	NA	NA	NA	NA
>prophage 1
NZ_CP013005	Xanthomonas citri pv. malvacearum strain XcmH1005 plasmid pXcmH, complete sequence	88284	0	82689	88284	transposase	Leptospira_phage(22.73%)	63	NA	NA
WP_089504470.1|796_1884_-|transposase	IS3-like element ISXac2 family transposase	transposase	S5WIU1	Leptospira_phage	36.8	4.9e-43
WP_078565984.1|1960_3337_-|transposase	IS5-like element ISXca5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.0	6.0e-62
WP_089504549.1|4059_5286_-	replication protein	NA	NA	NA	NA	NA
WP_078566343.1|5565_6753_-	zeta toxin family protein	NA	NA	NA	NA	NA
WP_005917846.1|6759_7023_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011053002.1|7047_7449_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
WP_005917852.1|7445_7706_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_089504550.1|8055_11649_+	TAL effector repeat-containing protein	NA	NA	NA	NA	NA
WP_089504551.1|12429_15516_+	TAL effector repeat-containing protein	NA	NA	NA	NA	NA
WP_005918469.1|16148_17426_-	lytic murein transglycosylase	NA	NA	NA	NA	NA
WP_005934469.1|19869_20793_-	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	50.8	1.4e-38
WP_005934467.1|21000_21240_+	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005934465.1|21239_21659_+	putative toxin-antitoxin system toxin component, PIN family	NA	NA	NA	NA	NA
WP_033836402.1|21663_24639_+|transposase	Tn3 family transposase	transposase	Q1MVP5	Enterobacteria_phage	47.9	2.0e-256
WP_033836401.1|24657_25356_+	UPF0149 family protein	NA	G9E3U3	Emiliania_huxleyi_virus	74.1	9.9e-05
WP_005918231.1|25909_26047_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005918230.1|26215_26842_+	ParA family protein	NA	E5FFJ3	Burkholderia_phage	37.6	4.2e-23
WP_005918229.1|26838_27162_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005918227.1|27306_27621_+	hypothetical protein	NA	NA	NA	NA	NA
WP_078566285.1|27868_29116_+	replication initiation protein	NA	NA	NA	NA	NA
WP_089504397.1|29377_30465_-|transposase	IS3-like element ISXac2 family transposase	transposase	S5WIU1	Leptospira_phage	36.8	2.9e-43
WP_087959283.1|30705_31930_+|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	76.3	1.1e-120
WP_089504552.1|31897_32431_+	TAL effector repeat-containing protein	NA	NA	NA	NA	NA
WP_089504553.1|32632_36637_+	TAL effector repeat-containing protein	NA	NA	NA	NA	NA
WP_033837725.1|36762_36948_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005918369.1|37101_37731_+	AAA family ATPase	NA	A2I303	Vibrio_virus	55.8	6.7e-53
WP_005918372.1|37743_37959_+	chromosome partitioning protein ParB	NA	NA	NA	NA	NA
WP_005918374.1|37975_38782_+	hypothetical protein	NA	NA	NA	NA	NA
WP_078566330.1|38797_39004_+	antitoxin VbhA family protein	NA	NA	NA	NA	NA
WP_089504554.1|39051_39663_-	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	48.3	3.1e-34
WP_089504555.1|39816_43617_+	TAL effector repeat-containing protein	NA	NA	NA	NA	NA
WP_089504397.1|43751_44839_-|transposase	IS3-like element ISXac2 family transposase	transposase	S5WIU1	Leptospira_phage	36.8	2.9e-43
WP_080575193.1|45032_45854_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003490639.1|46364_46754_-	hypothetical protein	NA	NA	NA	NA	NA
WP_017113468.1|46962_47637_+	NYN domain-containing protein	NA	A4JWQ6	Burkholderia_virus	60.1	7.9e-76
WP_078565982.1|47689_48229_-	plasmid pRiA4b ORF-3 family protein	NA	A0A2H4PDG5	Mycobacterium_phage	33.3	5.6e-24
WP_089504418.1|48592_49812_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	67.0	2.7e-98
WP_089504556.1|50872_54367_-	TAL effector repeat-containing protein	NA	NA	NA	NA	NA
WP_078565902.1|54910_55732_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157733730.1|56455_56752_+	hypothetical protein	NA	NA	NA	NA	NA
WP_078565906.1|56804_57437_-	ParA family protein	NA	A0A0K1Y6H3	Rhodobacter_phage	40.1	2.5e-31
WP_078565908.1|58261_58891_+	AAA family ATPase	NA	A2I303	Vibrio_virus	46.2	1.2e-41
WP_078565910.1|58887_59124_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039447645.1|59530_59884_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005931741.1|59932_60640_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033480397.1|60636_61083_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005931747.1|61432_61828_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003490597.1|61923_62193_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005931751.1|62189_62483_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_087943923.1|63400_64488_-|transposase	IS3-like element ISXac2 family transposase	transposase	S5WIU1	Leptospira_phage	36.8	2.9e-43
WP_089504557.1|64889_66045_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	41.0	4.6e-47
WP_089504558.1|66225_69822_-	TAL effector repeat-containing protein	NA	NA	NA	NA	NA
WP_089504559.1|69978_71198_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	65.2	3.1e-94
WP_089504562.1|71351_71972_+	hypothetical protein	NA	NA	NA	NA	NA
WP_078566025.1|72170_72512_+	hypothetical protein	NA	NA	NA	NA	NA
WP_089504560.1|72652_74227_+	type IV secretion system DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_089504561.1|74240_77225_+	conjugative relaxase	NA	NA	NA	NA	NA
WP_003490829.1|77514_77799_+	hypothetical protein	NA	NA	NA	NA	NA
WP_087942126.1|78403_79560_-|transposase	IS3-like element ISXc8 family transposase	transposase	U5P429	Shigella_phage	41.0	4.6e-47
WP_015463816.1|79888_80125_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039583105.1|80121_80751_-	AAA family ATPase	NA	A2I303	Vibrio_virus	45.7	3.5e-41
WP_078565925.1|80870_81551_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_089504397.1|81602_82689_+|transposase	IS3-like element ISXac2 family transposase	transposase	S5WIU1	Leptospira_phage	36.8	2.9e-43
